RLG00000028287

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
21059905 .. 21062646
2742 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028287

Sequence Viewer

Length: 2154 bp
ATGCCAGCAGTTCACAGCCAGTGTATTAAAGACCAGCAACTATCATTGCTCCAATTCAAGAAAAGCCTCGTGTTCGATGCTGATTTCGGTCCTTCCACCAAGATTGTTTCTTGGAATGCAAGTACTGATTGTTGTTCTTGGGTCGGCGTCACTTGTAGCCGTAATGGGCGTGTTCTGGGTCTTGACTTCAGCAGCGAAGGTATCTCAGCTGGAATTAACAATTCCAACAGTCTCTTCCATCTTCATTATCTTCAATCTTTATCCGTGATTAGGTTGGACGGGAACGATATCTCTGCGCCAGTTCCAGGATTCTTTGCCAACTTTTCAAACTTAACTGTCTTGAATCTCCAGAGTTGCTCATTGCATGGAACATTTCCCAAAGAGATCTTTCAGTTACCTTCTCTACAAAGTATTGACCTTTCAGATAATGAGAAACTTGATGGTTCCTTGCCAGAATTCTCAAGCAATGGATCTCTTCAGTACCTGCATCTATGGCAGACAAATTTTTCAGGGTTATTGCCAAATTCTATTGGCAACCTCAAAATGTTGTCCATCATAGAAATTTATGGTTGCATGTTCACCGGCCCGATCCCCAAGTCAATGGCAAACCTTACACAACTGAATTCTTTGTCGATGTCTGATAACCAGATAAGTGGCAAGATACCCAACTGGATTTGGAGTTTTAGTTATCTTGACGACCTAAATCTTTCTTGCAACTCCCTAGATTCTCTAGAAGTTCCTTCAAACAATCTCAGTGCCTTAGACATATACCTTGACCTCCATTCCAACCAGTTTCATGGGCAAATCCCAATTTTTCCATCACCTTACAGTTTCTATTATCTAGATTTCTCGAGAAATTATTTCAGCTCTCCCATACCGAGTACCACTGGAGATATGCTTGCAGACACTCGATTCTTGTCGCTTTCGAGCAATAACCTCAATGGGATCATTCCAGAATCATTATGCAATTCACAATTGTTTAAGATTCTTGATCTGTCCAATAATTCTTTGAGTGGCACGGTTCCCCGGTGCTTGACTACAATGAGCACGCTTGAAGTACTCAATTTAAGGAGAAACAATCTTACAAATGTTAATGAATTCTCTCATACTTGCAGTTTAGAAACGCTAGACATCAGTGGAAATCAAATTCAAGGCCAGTTTTTAAAATCTCTTGTCCACTGCACTCAGTTAAAGGTTTTAAATCTTGGAAACAATCTTATAGCAGAACCATTTCCATGCCTTTTGAGAAATACATCCACCTTGCGTGTCCTTGTCTTGCGATCCAATAAATTCTATGGGCACATTGGATGTCGCAAGACTAATGGCACTTGGCCAGTACTTCAAATCATAGACTTAGCTCACAACAATTTTAGTGGTGAAGTACCTGGAACAGCTTTGACAACTTGGCAGGCAATGAGGACTAGCAAAGATAATATCCCATGGGAGTTCAGTAGGCTTCCATTTGGTGATGAAAATGGACCTCATTATAAAGAAGTTACAGTCATGGTTAGCAACAAAGGTTTAGAGATGGAGCTGGTCAATATTTTAACAATCTTCACCTCCATTGACTTCTCATGCAACAAGTTCAACGGATCAATACCAGAGGAAATTGGAGAACTCAAATCATTATATGCCCTCAACTTGTCCAACAATGCTTTCACAGGTGCAGTTCCATCATCATTAAGTAACTTGAGTGAGCTAGAATCTTTGGACCTCTCGAAAAACAAACTGAGCGGTCAAATCCCACTGGAGCTTACAAAACTCACTTTCCTTGCATTCTTGAATCTCTCATATAATCAATTGGTCGGGAGGATACCAAGCGGTGCTCAATTTTCAACATTTGATGCAGCTTCCTTCCAAGGTAACAAAGGATTATGGGGGCCTCCTTTAACAGCAGATAATAACACAAGGTTCTCACCACCAAAGAAGGAAGGCAACCACTCAAATCCTGGACATGAGATTGATTGGGATATTATCTGTCCTGAAATTGGGTTTACATGTGGGTTTGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTATTACAGAGCTATGTATAACATGCTTCTAAAGATATTCCCTCAGCTGGAACAGAGATTTGGTCATCACAGGAGACATGTTTATGTACATCAGAGATACTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

718

Amino Acids

80.24

Weight (kDa)

6.52

Isoelectric Point (pI)

40.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 10 - 53 2.2e-10 Leucine rich repeat N-terminal domain
LRR_8 PF13855 86 - 143 4.2e-08 Leucine rich repeat
LRR_14 PF23598 154 - 239 1.1e-08 Leucine-rich repeat region
LRR_8 PF13855 328 - 383 2.2e-09 Leucine rich repeat
LRR_4 PF12799 372 - 408 5.6e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 542 - 601 2.5e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1488
Acc36I ACCTGC 1 cut(s) 492
AccBSI CCGCTC 1 cut(s) 1734
AciI CCGC 2 cut(s) 1734, 1821
AclWI GGATC 5 cut(s) 478, 583, 953, 1275, 1600
AcoI YGGCCR 1 cut(s) 1331
AcsI RAATTY 8 cut(s) 455, 502, 523, 561, 622, 1097, 1146, 1289
AcuI CTGAAG 2 cut(s) 172, 461
AcyI GRCGYC 1 cut(s) 147
AfaI GTAC 7 cut(s) 124, 482, 883, 1059, 1338, 1383, 2130
AfiI CCNNNNNNNGG 4 cut(s) 270, 305, 1988, 2089
AflIII ACRYGT 2 cut(s) 1997, 2119
AjnI CCWGG 3 cut(s) 304, 1384, 1948
AjuI GAANNNNNNNTTGG 6 cut(s) 218, 250, 1640, 1672, 2085, 2117
Alw21I GWGCWC 2 cut(s) 1049, 1828
Alw26I GTCTC 3 cut(s) 236, 2110, 2140
AlwI GGATC 5 cut(s) 478, 583, 953, 1275, 1600
AlwNI CAGNNNCTG 1 cut(s) 484
Ama87I CYCGRG 1 cut(s) 850
AoxI GGCC 4 cut(s) 583, 1153, 1331, 1880
ApeKI GCWGC 2 cut(s) 192, 1847
ApoI RAATTY 8 cut(s) 455, 502, 523, 561, 622, 1097, 1146, 1289
Asp700I GAANNNNTTC 1 cut(s) 1230
AspLEI GCGC 1 cut(s) 298
AspS9I GGNCC 5 cut(s) 89, 584, 1478, 1711, 1880
AsuC2I CCSGG 1 cut(s) 1027
AsuHPI GGTGA 6 cut(s) 571, 813, 1388, 1478, 1549, 1908
AvaI CYCGRG 1 cut(s) 850
AvaII GGWCC 3 cut(s) 89, 1478, 1711
BaeGI GKGCMC 1 cut(s) 1302
BalI TGGCCA 1 cut(s) 1333
BauI CACGAG 1 cut(s) 68
Bbv12I GWGCWC 2 cut(s) 1049, 1828
BbvCI CCTCAGC 1 cut(s) 2085
BbvI GCAGC 2 cut(s) 204, 1859
BccI CCATC 7 cut(s) 246, 434, 560, 826, 1522, 1681, 2025
BceAI ACGGC 1 cut(s) 144
BcgI CGANNNNNNTGC 2 cut(s) 275, 309
BciT130I CCWGG 3 cut(s) 306, 1386, 1950
BciVI GTATCC 1 cut(s) 1806
BcnI CCSGG 1 cut(s) 1027
BcoDI GTCTC 3 cut(s) 236, 2110, 2140
BfaI CTAG 6 cut(s) 722, 731, 842, 1127, 1422, 1700
BfuAI ACCTGC 1 cut(s) 492
BfuI GTATCC 1 cut(s) 1806
BglII AGATCT 1 cut(s) 384
BisI GCNGC 2 cut(s) 193, 1848
BlsI GCNGC 2 cut(s) 194, 1849
BmcAI AGTACT 3 cut(s) 124, 1059, 1338
Bme1390I CCNGG 4 cut(s) 306, 1027, 1386, 1950
Bme18I GGWCC 3 cut(s) 89, 1478, 1711
BmeT110I CYCGRG 1 cut(s) 850
BmgT120I GGNCC 5 cut(s) 89, 584, 1478, 1711, 1880
BmiI GGNNCC 3 cut(s) 445, 1023, 1881
BmrFI CCNGG 4 cut(s) 306, 1027, 1386, 1950
BmsI GCATC 3 cut(s) 67, 496, 1834
BpmI CTGGAG 3 cut(s) 332, 909, 1769
Bpu10I CCTNAGC 1 cut(s) 2085
BpuEI CTTGAG 2 cut(s) 445, 1711
BpuMI CCSGG 1 cut(s) 1027
BsaHI GRCGYC 1 cut(s) 147
BsaJI CCNNGG 3 cut(s) 1025, 1439, 1858
BsaXI ACNNNNNCTCC 2 cut(s) 670, 700
Bsc4I CCNNNNNNNGG 4 cut(s) 270, 305, 1988, 2089
Bse118I RCCGGY 1 cut(s) 581
Bse1I ACTGG 9 cut(s) 19, 299, 674, 790, 892, 1156, 1334, 1752, 2147
Bse3DI GCAATG 4 cut(s) 44, 359, 472, 1419
BseBI CCWGG 3 cut(s) 306, 1386, 1950
BseDI CCNNGG 3 cut(s) 1025, 1439, 1858
BseGI GGATG 2 cut(s) 1253, 1313
BseLI CCNNNNNNNGG 4 cut(s) 270, 305, 1988, 2089
BseMI GCAATG 4 cut(s) 44, 359, 472, 1419
BseMII CTCAG 5 cut(s) 219, 766, 1199, 1721, 2099
BseNI ACTGG 9 cut(s) 19, 299, 674, 790, 892, 1156, 1334, 1752, 2147
BseSI GKGCMC 1 cut(s) 1302
BseXI GCAGC 2 cut(s) 204, 1859
BsgI GTGCAG 2 cut(s) 1165, 1686
BshFI GGCC 4 cut(s) 585, 1155, 1333, 1882
BsiHKAI GWGCWC 2 cut(s) 1049, 1828
BsiHKCI CYCGRG 1 cut(s) 850
BsiSI CCGG 2 cut(s) 582, 1027
BslI CCNNNNNNNGG 4 cut(s) 270, 305, 1988, 2089
BsmAI GTCTC 3 cut(s) 236, 2110, 2140
BsmBI CGTCTC 1 cut(s) 2140
BsmI GAATGC 2 cut(s) 121, 1775
BsnI GGCC 4 cut(s) 585, 1155, 1333, 1882
BsoBI CYCGRG 1 cut(s) 850
Bsp1286I GDGCHC 3 cut(s) 1049, 1302, 1828
Bsp1407I TGTACA 1 cut(s) 2128
Bsp143I GATC 7 cut(s) 384, 470, 588, 945, 991, 1280, 1592
Bsp19I CCATGG 1 cut(s) 1439
BspACI CCGC 2 cut(s) 1734, 1821
BspANI GGCC 4 cut(s) 585, 1155, 1333, 1882
BspCNI CTCAG 5 cut(s) 218, 765, 1198, 1722, 2098
BspLI GGNNCC 3 cut(s) 445, 1023, 1881
BspMI ACCTGC 1 cut(s) 492
BspPI GGATC 5 cut(s) 478, 583, 953, 1275, 1600
BsrBI CCGCTC 1 cut(s) 1734
BsrDI GCAATG 4 cut(s) 44, 359, 472, 1419
BsrFI RCCGGY 1 cut(s) 581
BsrGI TGTACA 1 cut(s) 2128
BsrI ACTGG 9 cut(s) 19, 299, 674, 790, 892, 1156, 1334, 1752, 2147
BssAI RCCGGY 1 cut(s) 581
BssECI CCNNGG 3 cut(s) 1025, 1439, 1858
BssMI GATC 7 cut(s) 384, 470, 588, 945, 991, 1280, 1592
BssNI GRCGYC 1 cut(s) 147
BssSI CACGAG 1 cut(s) 68
BssT1I CCWWGG 2 cut(s) 1439, 1858
Bst2BI CACGAG 1 cut(s) 68
Bst2UI CCWGG 3 cut(s) 306, 1386, 1950
Bst4CI ACNGT 5 cut(s) 230, 337, 830, 1021, 1501
Bst6I CTCTTC 2 cut(s) 239, 480
BstACI GRCGYC 1 cut(s) 147
BstAUI TGTACA 1 cut(s) 2128
BstC8I GCNNGC 4 cut(s) 6, 900, 1049, 1410
BstDEI CTNAG 7 cut(s) 205, 752, 760, 1185, 1354, 1730, 2085
BstDSI CCRYGG 1 cut(s) 1439
BstF5I GGATG 2 cut(s) 1253, 1313
BstHHI GCGC 1 cut(s) 298
BstKTI GATC 7 cut(s) 387, 473, 591, 948, 994, 1283, 1595
BstMAI GTCTC 3 cut(s) 236, 2110, 2140
BstMBI GATC 7 cut(s) 384, 470, 588, 945, 991, 1280, 1592
BstMWI GCNNNNNNNGC 1 cut(s) 493
BstNI CCWGG 3 cut(s) 306, 1386, 1950
BstNSI RCATGY 4 cut(s) 577, 2001, 2068, 2123
BstSCI CCNGG 4 cut(s) 304, 1025, 1384, 1948
BstSLI GKGCMC 1 cut(s) 1302
BstV1I GCAGC 2 cut(s) 204, 1859
BstX2I RGATCY 2 cut(s) 384, 470
BstXI CCANNNNNNTGG 3 cut(s) 601, 653, 797
BstYI RGATCY 2 cut(s) 384, 470
BsuI GTATCC 1 cut(s) 1806
BsuRI GGCC 4 cut(s) 585, 1155, 1333, 1882
BtgI CCRYGG 1 cut(s) 1439
BtsCI GGATG 2 cut(s) 1253, 1313
BtsI GCAGTG 1 cut(s) 1177
BtsIMutI CAGTG 6 cut(s) 26, 760, 885, 1141, 1177, 1745
BveI ACCTGC 1 cut(s) 492
Cac8I GCNNGC 4 cut(s) 6, 900, 1049, 1410
CaiI CAGNNNCTG 1 cut(s) 484
CfoI GCGC 1 cut(s) 298
Cfr10I RCCGGY 1 cut(s) 581
Cfr13I GGNCC 5 cut(s) 89, 584, 1478, 1711, 1880
CseI GACGC 1 cut(s) 136
Csp6I GTAC 7 cut(s) 123, 481, 882, 1058, 1337, 1382, 2129
CspCI CAANNNNNGTGG 4 cut(s) 85, 120, 1354, 1389
CviQI GTAC 7 cut(s) 123, 481, 882, 1058, 1337, 1382, 2129
DdeI CTNAG 7 cut(s) 205, 752, 760, 1185, 1354, 1730, 2085
DpnI GATC 7 cut(s) 386, 472, 590, 947, 993, 1282, 1594
DpnII GATC 7 cut(s) 384, 470, 588, 945, 991, 1280, 1592
DraI TTTAAA 2 cut(s) 1164, 1200
EaeI YGGCCR 1 cut(s) 1331
Eam1104I CTCTTC 2 cut(s) 239, 480
EarI CTCTTC 2 cut(s) 239, 480
Eco130I CCWWGG 2 cut(s) 1439, 1858
Eco32I GATATC 1 cut(s) 289
Eco47I GGWCC 3 cut(s) 89, 1478, 1711
Eco57I CTGAAG 2 cut(s) 172, 461
Eco88I CYCGRG 1 cut(s) 850
EcoO109I RGGNCCY 1 cut(s) 1880
EcoRI GAATTC 3 cut(s) 455, 622, 1097
EcoRII CCWGG 3 cut(s) 304, 1384, 1948
EcoRV GATATC 1 cut(s) 289
EcoT14I CCWWGG 2 cut(s) 1439, 1858
ErhI CCWWGG 2 cut(s) 1439, 1858
Esp3I CGTCTC 1 cut(s) 2140
Fnu4HI GCNGC 2 cut(s) 193, 1848
FokI GGATG 2 cut(s) 1240, 1320
Fsp4HI GCNGC 2 cut(s) 193, 1848
FspBI CTAG 6 cut(s) 722, 731, 842, 1127, 1422, 1700
GlaI GCGC 1 cut(s) 297
GluI GCNGC 2 cut(s) 193, 1848
GsuI CTGGAG 3 cut(s) 332, 909, 1769
HaeIII GGCC 4 cut(s) 585, 1155, 1333, 1882
HapII CCGG 2 cut(s) 582, 1027
HgaI GACGC 1 cut(s) 136
HhaI GCGC 1 cut(s) 298
Hin1I GRCGYC 1 cut(s) 147
Hin6I GCGC 1 cut(s) 296
HinP1I GCGC 1 cut(s) 296
HinfI GANTC 8 cut(s) 309, 343, 725, 912, 956, 985, 1703, 1783
HpaII CCGG 2 cut(s) 582, 1027
HphI GGTGA 6 cut(s) 571, 813, 1388, 1478, 1549, 1908
Hpy166II GTNNAC 4 cut(s) 13, 579, 1177, 1995
Hpy188I TCNGA 3 cut(s) 424, 640, 2136
Hpy8I GTNNAC 4 cut(s) 13, 579, 1177, 1995
HpyAV CCTTC 7 cut(s) 102, 191, 408, 750, 1864, 1921, 1925
HpyCH4III ACNGT 5 cut(s) 230, 337, 830, 1021, 1501
HpyCH4IV ACGT 1 cut(s) 2149
HpyF10VI GCNNNNNNNGC 1 cut(s) 493
HpyF3I CTNAG 7 cut(s) 205, 752, 760, 1185, 1354, 1730, 2085
HpySE526I ACGT 1 cut(s) 2149
Hsp92I GRCGYC 1 cut(s) 147
HspAI GCGC 1 cut(s) 296
Kzo9I GATC 7 cut(s) 384, 470, 588, 945, 991, 1280, 1592
LmnI GCTCC 3 cut(s) 54, 1531, 1750
Lsp1109I GCAGC 2 cut(s) 204, 1859
LweI GCATC 3 cut(s) 67, 496, 1834
MaeI CTAG 6 cut(s) 722, 731, 842, 1127, 1422, 1700
MaeII ACGT 1 cut(s) 2149
MaeIII GTNAC 6 cut(s) 148, 393, 1495, 1685, 1862, 2010
MalI GATC 7 cut(s) 386, 472, 590, 947, 993, 1282, 1594
MbiI CCGCTC 1 cut(s) 1734
MboI GATC 7 cut(s) 384, 470, 588, 945, 991, 1280, 1592
MboII GAAGA 5 cut(s) 226, 233, 242, 467, 1546
MfeI CAATTG 2 cut(s) 974, 1799
MflI RGATCY 2 cut(s) 384, 470
MhlI GDGCHC 3 cut(s) 1049, 1302, 1828
MlsI TGGCCA 1 cut(s) 1333
MluNI TGGCCA 1 cut(s) 1333
MmeI TCCRAC 4 cut(s) 249, 255, 810, 1671
Mox20I TGGCCA 1 cut(s) 1333
MroXI GAANNNNTTC 1 cut(s) 1230
MscI TGGCCA 1 cut(s) 1333
MslI CAYNNNNRTG 2 cut(s) 1234, 2124
Msp20I TGGCCA 1 cut(s) 1333
MspA1I CMGCKG 2 cut(s) 209, 2089
MspI CCGG 2 cut(s) 582, 1027
MspR9I CCNGG 4 cut(s) 306, 1027, 1386, 1950
MunI CAATTG 2 cut(s) 974, 1799
Mva1269I GAATGC 2 cut(s) 121, 1775
MvaI CCWGG 3 cut(s) 306, 1386, 1950
MwoI GCNNNNNNNGC 1 cut(s) 493
NciI CCSGG 1 cut(s) 1027
NcoI CCATGG 1 cut(s) 1439
NdeII GATC 7 cut(s) 384, 470, 588, 945, 991, 1280, 1592
NlaIV GGNNCC 3 cut(s) 445, 1023, 1881
NmuCI GTSAC 2 cut(s) 148, 2010
NspI RCATGY 4 cut(s) 577, 2001, 2068, 2123
PaeR7I CTCGAG 1 cut(s) 850
PciI ACATGT 2 cut(s) 1997, 2119
PctI GAATGC 2 cut(s) 121, 1775
PdmI GAANNNNTTC 1 cut(s) 1230
PfeI GAWTC 8 cut(s) 309, 343, 725, 912, 956, 985, 1703, 1783
PfoI TCCNGGA 2 cut(s) 304, 1948
PkrI GCNGC 2 cut(s) 194, 1849
PscI ACATGT 2 cut(s) 1997, 2119
PsiI TTATAA 1 cut(s) 1488
Psp6I CCWGG 3 cut(s) 304, 1384, 1948
PspGI CCWGG 3 cut(s) 304, 1384, 1948
PspN4I GGNNCC 3 cut(s) 445, 1023, 1881
PspPI GGNCC 5 cut(s) 89, 584, 1478, 1711, 1880
PstNI CAGNNNCTG 1 cut(s) 484
PsuI RGATCY 2 cut(s) 384, 470
PvuII CAGCTG 2 cut(s) 209, 2089
RsaI GTAC 7 cut(s) 124, 482, 883, 1059, 1338, 1383, 2130
RsaNI GTAC 7 cut(s) 123, 481, 882, 1058, 1337, 1382, 2129
RseI CAYNNNNRTG 2 cut(s) 1234, 2124
SatI GCNGC 2 cut(s) 193, 1848
Sau3AI GATC 7 cut(s) 384, 470, 588, 945, 991, 1280, 1592
Sau96I GGNCC 5 cut(s) 89, 584, 1478, 1711, 1880
ScaI AGTACT 3 cut(s) 124, 1059, 1338
ScrFI CCNGG 4 cut(s) 306, 1027, 1386, 1950
SduI GDGCHC 3 cut(s) 1049, 1302, 1828
SfaNI GCATC 3 cut(s) 67, 496, 1834
Sfr274I CTCGAG 1 cut(s) 850
SinI GGWCC 3 cut(s) 89, 1478, 1711
SlaI CTCGAG 1 cut(s) 850
SmiMI CAYNNNNRTG 2 cut(s) 1234, 2124
SmlI CTYRAG 3 cut(s) 460, 850, 1690
SmoI CTYRAG 3 cut(s) 460, 850, 1690
SsiI CCGC 2 cut(s) 1734, 1821
SspI AATATT 1 cut(s) 1543
SspMI CTAG 6 cut(s) 722, 731, 842, 1127, 1422, 1700
StyD4I CCNGG 4 cut(s) 304, 1025, 1384, 1948
StyI CCWWGG 2 cut(s) 1439, 1858
TaaI ACNGT 5 cut(s) 230, 337, 830, 1021, 1501
TaiI ACGT 1 cut(s) 2152
TaqI TCGA 6 cut(s) 75, 632, 851, 910, 926, 1718
TaqII GACCGA 1 cut(s) 77
TatI WGTACW 4 cut(s) 122, 1057, 1336, 2128
TfiI GAWTC 8 cut(s) 309, 343, 725, 912, 956, 985, 1703, 1783
TscAI CASTG 6 cut(s) 26, 760, 892, 1141, 1184, 1752
TseFI GTSAC 2 cut(s) 148, 2010
TseI GCWGC 2 cut(s) 192, 1847
Tsp45I GTSAC 2 cut(s) 148, 2010
TspDTI ATGAA 4 cut(s) 233, 785, 1110, 1485
TspGWI ACGGA 2 cut(s) 253, 1605
TspRI CASTG 6 cut(s) 26, 760, 892, 1141, 1184, 1752
VpaK11BI GGWCC 3 cut(s) 89, 1478, 1711
XapI RAATTY 8 cut(s) 455, 502, 523, 561, 622, 1097, 1146, 1289
XbaI TCTAGA 2 cut(s) 730, 841
XceI RCATGY 4 cut(s) 577, 2001, 2068, 2123
XcmI CCANNNNNNNNNTGG 1 cut(s) 1946
XhoI CTCGAG 1 cut(s) 850
XmnI GAANNNNTTC 1 cut(s) 1230
XspI CTAG 6 cut(s) 722, 731, 842, 1127, 1422, 1700
ZrmI AGTACT 3 cut(s) 124, 1059, 1338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.