RLG00000023671

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
26989408 .. 26996385
6978 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023671

Sequence Viewer

Length: 2001 bp
ATGCACAGGTTTTTTCCTGTGACACAAGTTCAACTTTCTGATCCTGGAAACTCAAGGAATCAGCTTGCAAGAATGCTAGCCATTGATTCAAGGCTGATTTATGCTGGCAAGCCGCTCAGAGATGACAAACTGCTGAAGACTACAACATTGAGGGCACAGAAATCTTCCTGCTTTGGAACTAATCCGTCTCGAAACCCAGAAATTCATGGACACTTATTATCTGGACTCATTCCGGCCTTCCCCACATTCCCACCTATTCCCACGCTTATCACATGGAATTCGAGTACTGATTGCTGCTCTTGGCTCGGTGTAACTTGCAGCACTAATGGGTATGTCATCGGACTTGACCTCAGCAGCGAGTTTGTTTCATGCAGAATTGACAATTCCAGCAGTCTCTTCCAACTTCAACATCTTGAGAGCCTCAATTTGGCCAATAATGTCTTCAATGGCTCTCGAATTCCATCTGCAATCGGAGAGCTTACAAATCTGAGGTATCTAAATTTAGCTAGTGGTTTCTATTCCGGGCAAATTCCCATTGAGATTTCACGCTTGACTAGGCCCCATATGTGCTCCCTTGCAAAGCTTCAATCTCTGTATGAGATTGACTTGGGAAATAACTCGTTCTATGCTCCGGTTCCAAGATCCTTTGCCAATTTTTCAAACTTGACTTCCTTGAGTCTCTCTGGTTGTAACTTGCTGGGAATATTTCCGAAAGAGGTCTTTCTTATTCCTTCACTACAAACCATTGATATTTCTAGTAATCTGGAACTTGGTGCTTCCTTTCCAGAGTTTCCAAAGAATAGGACAAAACTTTCAACCATCTCTCTTTCACAATGCAATTTCACTGGATCCCTCCCCATGTCAATTGAGAACCTTACCCAATTGGTTAACCTGGACGTGTCATGGAACAGGTTCAATAGTCCTATCAGTCCTATTCACTGGGAAGCCCTTGTTAATCTGGAAAGCCTTGACTTCAGCAACAATCTACTCTATGGGAGTATTCCATCATCTATTGTTTCTCCTCCCTTGCTGGTTGCATTAGCACTTTCTAATAATCATTTCTCTGGTCAAATTGAGAACTTGCTGTTGGCTTCTAACAAGTTGGTAGGACTCCCAGATTTTTTAAAAAATCAATCCAGACTTTGGCAATTAGACCTTTCGGGAAACCAGATTCAAGGCCAGATACCTAATTGGATTTGGAGGCTCAATTCTCTTGGACTCCTAAATCTCTCTTATAACTCCATTGTAAATCTAGATCCTCTTCTTCCTAATTCTACTTTTACTTTATTTTCTCTTGACCTTAATTCCAACAAGATTCAGGGTATCCACTCCTCATATGCCTTCCTTCAGATTGGCCACTTGGGTTTAGCTTCTAACAAGTTGAGATCATTCCCAGACTTCTTGAGAAATCAGTCCACATTAAATTACTTGGGCCTTTCAAACAACCAAATTCAAGGCCAGATACCCAATTGGATTTGGAGGCTCAATTCTCTTCAAGAACTGAATCTTTCTTGTAACTCCTTGGAAACTCTAGAAGCTCCTTTACCTAAGGCTAATTCTTCTACTGTTGTGACGTCACTTGATCTTCATTCAAACCAGCTTCAGGGACAAATCCCATTGTTCCTACCATTTGCCCATTTTCTGGATTACTCGAGAAATAATTTTAGCTCTAGTCTACCGACTGACATTGGCAGTTTTATCTCTCAAACTAATTTCCTCTCTCTGTCAAGCAATAACTTGCATGGAACCATTCCTATATCAATCTGCAATACAACTGGTATGGTTCTAGATCTGTCCTATAATTCTTTGAGTGGTATCATTCCGCAATGCTTGACTCAACTTTCGCTTTCAGTCCTTGATTTAAGGAAAAACAACCTCGCTGGCTCTATTCCTGATAATTTTCTTGAGCATTGTAAGCTACAAACTCTTGATCTCAGATTCTCAGCAGAAATAATATACAAGGCCAGTTTCCGAAATCTCTTGTCAACTGCTCAAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

667

Amino Acids

73.64

Weight (kDa)

6.88

Isoelectric Point (pI)

37.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 87 - 107 5.1e-06 Leucine rich repeat N-terminal domain
LRR_8 PF13855 358 - 415 2.3e-06 Leucine rich repeat
LRR_8 PF13855 454 - 508 3.2e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1236
AatII GACGTC 1 cut(s) 1577
AccB7I CCANNNNNTGG 2 cut(s) 1143, 1642
AccBSI CCGCTC 1 cut(s) 115
AccI GTMKAC 1 cut(s) 1675
AciI CCGC 2 cut(s) 113, 1823
AclWI GGATC 5 cut(s) 35, 636, 843, 856, 1250
AcoI YGGCCR 2 cut(s) 429, 1354
AcsI RAATTY 6 cut(s) 201, 277, 456, 499, 528, 1449
AcuI CTGAAG 4 cut(s) 155, 958, 1331, 1586
AcyI GRCGYC 1 cut(s) 1574
AfaI GTAC 1 cut(s) 286
AfiI CCNNNNNNNGG 4 cut(s) 427, 1143, 1603, 1642
AflIII ACRYGT 1 cut(s) 897
AjiI CACGTC 1 cut(s) 898
AjnI CCWGG 2 cut(s) 43, 891
AjuI GAANNNNNNNTTGG 4 cut(s) 425, 457, 1070, 1102
AluBI AGCT 9 cut(s) 64, 478, 506, 583, 1370, 1538, 1600, 1668, 1918
AluI AGCT 9 cut(s) 64, 478, 506, 583, 1370, 1538, 1600, 1668, 1918
Alw21I GWGCWC 1 cut(s) 572
Alw26I GTCTC 3 cut(s) 192, 398, 683
AlwI GGATC 5 cut(s) 35, 636, 843, 856, 1250
Ama87I CYCGRG 1 cut(s) 1651
AoxI GGCC 8 cut(s) 234, 429, 557, 1177, 1354, 1432, 1456, 1962
ApeKI GCWGC 3 cut(s) 294, 318, 354
ApoI RAATTY 6 cut(s) 201, 277, 456, 499, 528, 1449
ArsI GACNNNNNNTTYG 2 cut(s) 1825, 1857
Asp700I GAANNNNTTC 1 cut(s) 911
AspS9I GGNCC 2 cut(s) 558, 1432
AsuC2I CCSGG 1 cut(s) 523
AsuNHI GCTAGC 1 cut(s) 76
AvaI CYCGRG 1 cut(s) 1651
AxyI CCTNAGG 1 cut(s) 1548
BaeGI GKGCMC 1 cut(s) 157
BalI TGGCCA 2 cut(s) 431, 1356
BamHI GGATCC 1 cut(s) 848
BarI GAAGNNNNNNTAC 2 cut(s) 1527, 1559
BbsI GAAGAC 2 cut(s) 143, 433
Bbv12I GWGCWC 1 cut(s) 572
BbvCI CCTCAGC 1 cut(s) 350
BbvI GCAGC 3 cut(s) 281, 330, 366
BccI CCATC 3 cut(s) 469, 827, 1012
BciT130I CCWGG 2 cut(s) 45, 893
BciVI GTATCC 1 cut(s) 1334
BcnI CCSGG 1 cut(s) 523
BcoDI GTCTC 3 cut(s) 192, 398, 683
BfaI CTAG 8 cut(s) 77, 507, 555, 756, 1253, 1532, 1671, 1787
BfuI GTATCC 1 cut(s) 1334
BglII AGATCT 1 cut(s) 1789
BisI GCNGC 4 cut(s) 113, 295, 319, 355
BlsI GCNGC 4 cut(s) 114, 296, 320, 356
BmcAI AGTACT 1 cut(s) 286
Bme1390I CCNGG 3 cut(s) 45, 523, 893
BmeT110I CYCGRG 1 cut(s) 1651
BmgBI CACGTC 1 cut(s) 898
BmgT120I GGNCC 2 cut(s) 558, 1432
BmiI GGNNCC 4 cut(s) 560, 636, 850, 1747
BmrFI CCNGG 3 cut(s) 45, 523, 893
BmrI ACTGGG 1 cut(s) 949
BmtI GCTAGC 1 cut(s) 80
BmuI ACTGGG 1 cut(s) 949
BpiI GAAGAC 2 cut(s) 143, 433
Bpu10I CCTNAGC 1 cut(s) 350
BpuEI CTTGAG 6 cut(s) 37, 434, 694, 1423, 1925, 1977
BpuMI CCSGG 1 cut(s) 523
BsaHI GRCGYC 1 cut(s) 1574
BsaJI CCNNGG 1 cut(s) 1521
BsaWI WCCGGW 1 cut(s) 631
Bsc4I CCNNNNNNNGG 4 cut(s) 427, 1143, 1603, 1642
Bse1I ACTGG 4 cut(s) 850, 944, 1780, 1965
Bse21I CCTNAGG 1 cut(s) 1548
Bse3DI GCAATG 1 cut(s) 1832
BseBI CCWGG 2 cut(s) 45, 893
BseDI CCNNGG 1 cut(s) 1521
BseLI CCNNNNNNNGG 4 cut(s) 427, 1143, 1603, 1642
BseMI GCAATG 1 cut(s) 1832
BseMII CTCAG 5 cut(s) 130, 364, 479, 1948, 1956
BseNI ACTGG 4 cut(s) 850, 944, 1780, 1965
BseRI GAGGAG 2 cut(s) 1011, 1321
BseSI GKGCMC 1 cut(s) 157
BseXI GCAGC 3 cut(s) 281, 330, 366
BseYI CCCAGC 1 cut(s) 697
BshFI GGCC 8 cut(s) 236, 431, 559, 1179, 1356, 1434, 1458, 1964
BsiHKAI GWGCWC 1 cut(s) 572
BsiHKCI CYCGRG 1 cut(s) 1651
BsiSI CCGG 3 cut(s) 233, 522, 632
BslFI GGGAC 1 cut(s) 1620
BslI CCNNNNNNNGG 4 cut(s) 427, 1143, 1603, 1642
BsmAI GTCTC 3 cut(s) 192, 398, 683
BsmBI CGTCTC 1 cut(s) 192
BsmFI GGGAC 1 cut(s) 1620
BsmI GAATGC 1 cut(s) 78
BsnI GGCC 8 cut(s) 236, 431, 559, 1179, 1356, 1434, 1458, 1964
BsoBI CYCGRG 1 cut(s) 1651
Bsp1286I GDGCHC 2 cut(s) 157, 572
Bsp143I GATC 8 cut(s) 40, 641, 848, 1255, 1385, 1582, 1789, 1930
BspACI CCGC 2 cut(s) 113, 1823
BspANI GGCC 8 cut(s) 236, 431, 559, 1179, 1356, 1434, 1458, 1964
BspCNI CTCAG 5 cut(s) 129, 363, 480, 1947, 1955
BspLI GGNNCC 4 cut(s) 560, 636, 850, 1747
BspOI GCTAGC 1 cut(s) 80
BspPI GGATC 5 cut(s) 35, 636, 843, 856, 1250
BsrBI CCGCTC 1 cut(s) 115
BsrDI GCAATG 1 cut(s) 1832
BsrI ACTGG 4 cut(s) 850, 944, 1780, 1965
BssECI CCNNGG 1 cut(s) 1521
BssMI GATC 8 cut(s) 40, 641, 848, 1255, 1385, 1582, 1789, 1930
BssNI GRCGYC 1 cut(s) 1574
BssT1I CCWWGG 1 cut(s) 1521
Bst2UI CCWGG 2 cut(s) 45, 893
Bst4CI ACNGT 1 cut(s) 1567
Bst6I CTCTTC 3 cut(s) 401, 1266, 1497
BstACI GRCGYC 1 cut(s) 1574
BstC8I GCNNGC 5 cut(s) 66, 78, 106, 110, 1882
BstDEI CTNAG 6 cut(s) 116, 350, 488, 1548, 1934, 1942
BstKTI GATC 8 cut(s) 43, 644, 851, 1258, 1388, 1585, 1792, 1933
BstMAI GTCTC 3 cut(s) 192, 398, 683
BstMBI GATC 8 cut(s) 40, 641, 848, 1255, 1385, 1582, 1789, 1930
BstMWI GCNNNNNNNGC 1 cut(s) 1915
BstNI CCWGG 2 cut(s) 45, 893
BstSCI CCNGG 3 cut(s) 43, 521, 891
BstSLI GKGCMC 1 cut(s) 157
BstV1I GCAGC 3 cut(s) 281, 330, 366
BstV2I GAAGAC 2 cut(s) 143, 433
BstX2I RGATCY 4 cut(s) 641, 848, 1255, 1789
BstYI RGATCY 4 cut(s) 641, 848, 1255, 1789
Bsu36I CCTNAGG 1 cut(s) 1548
BsuI GTATCC 1 cut(s) 1334
BsuRI GGCC 8 cut(s) 236, 431, 559, 1179, 1356, 1434, 1458, 1964
BtrI CACGTC 1 cut(s) 898
BtsIMutI CAGTG 2 cut(s) 843, 937
Cac8I GCNNGC 5 cut(s) 66, 78, 106, 110, 1882
Cfr13I GGNCC 2 cut(s) 558, 1432
Csp6I GTAC 1 cut(s) 285
CviAII CATG 6 cut(s) 206, 273, 369, 859, 903, 1742
CviQI GTAC 1 cut(s) 285
DdeI CTNAG 6 cut(s) 116, 350, 488, 1548, 1934, 1942
DpnI GATC 8 cut(s) 42, 643, 850, 1257, 1387, 1584, 1791, 1932
DpnII GATC 8 cut(s) 40, 641, 848, 1255, 1385, 1582, 1789, 1930
DraI TTTAAA 1 cut(s) 1125
EaeI YGGCCR 2 cut(s) 429, 1354
Eam1104I CTCTTC 3 cut(s) 401, 1266, 1497
EarI CTCTTC 3 cut(s) 401, 1266, 1497
Eco130I CCWWGG 1 cut(s) 1521
Eco57I CTGAAG 4 cut(s) 155, 958, 1331, 1586
Eco81I CCTNAGG 1 cut(s) 1548
Eco88I CYCGRG 1 cut(s) 1651
EcoO109I RGGNCCY 1 cut(s) 558
EcoRI GAATTC 2 cut(s) 277, 456
EcoRII CCWGG 2 cut(s) 43, 891
EcoT14I CCWWGG 1 cut(s) 1521
ErhI CCWWGG 1 cut(s) 1521
Esp3I CGTCTC 1 cut(s) 192
FaeI CATG 6 cut(s) 209, 276, 372, 862, 906, 1745
FalI AAGNNNNNCTT 2 cut(s) 18, 50
FaqI GGGAC 1 cut(s) 1620
FatI CATG 6 cut(s) 205, 272, 368, 858, 902, 1741
FauNDI CATATG 2 cut(s) 564, 1336
FblI GTMKAC 1 cut(s) 1675
Fnu4HI GCNGC 4 cut(s) 113, 295, 319, 355
Fsp4HI GCNGC 4 cut(s) 113, 295, 319, 355
FspBI CTAG 8 cut(s) 77, 507, 555, 756, 1253, 1532, 1671, 1787
GluI GCNGC 4 cut(s) 113, 295, 319, 355
GsaI CCCAGC 1 cut(s) 701
HaeIII GGCC 8 cut(s) 236, 431, 559, 1179, 1356, 1434, 1458, 1964
HapII CCGG 3 cut(s) 233, 522, 632
Hin1I GRCGYC 1 cut(s) 1574
Hin1II CATG 6 cut(s) 209, 276, 372, 862, 906, 1745
HincII GTYRAC 2 cut(s) 889, 1986
HindII GTYRAC 2 cut(s) 889, 1986
HindIII AAGCTT 1 cut(s) 581
HpaI GTTAAC 1 cut(s) 889
HpaII CCGG 3 cut(s) 233, 522, 632
Hpy166II GTNNAC 4 cut(s) 889, 1416, 1676, 1986
Hpy188I TCNGA 9 cut(s) 40, 119, 341, 473, 489, 711, 1350, 1937, 1973
Hpy8I GTNNAC 4 cut(s) 889, 1416, 1676, 1986
HpyAV CCTTC 4 cut(s) 247, 741, 1351, 1355
HpyCH4III ACNGT 1 cut(s) 1567
HpyCH4IV ACGT 2 cut(s) 897, 1574
HpyF10VI GCNNNNNNNGC 1 cut(s) 1915
HpyF3I CTNAG 6 cut(s) 116, 350, 488, 1548, 1934, 1942
HpySE526I ACGT 2 cut(s) 897, 1574
Hsp92I GRCGYC 1 cut(s) 1574
Hsp92II CATG 6 cut(s) 209, 276, 372, 862, 906, 1745
KspAI GTTAAC 1 cut(s) 889
Kzo9I GATC 8 cut(s) 40, 641, 848, 1255, 1385, 1582, 1789, 1930
LmnI GCTCC 3 cut(s) 575, 634, 1543
Lsp1109I GCAGC 3 cut(s) 281, 330, 366
MaeI CTAG 8 cut(s) 77, 507, 555, 756, 1253, 1532, 1671, 1787
MaeII ACGT 2 cut(s) 897, 1574
MaeIII GTNAC 6 cut(s) 19, 310, 689, 1514, 1570, 1575
MalI GATC 8 cut(s) 42, 643, 850, 1257, 1387, 1584, 1791, 1932
MbiI CCGCTC 1 cut(s) 115
MboI GATC 8 cut(s) 40, 641, 848, 1255, 1385, 1582, 1789, 1930
MboII GAAGA 9 cut(s) 148, 156, 388, 433, 1253, 1256, 1484, 1551, 1577
MfeI CAATTG 3 cut(s) 864, 881, 1468
MflI RGATCY 4 cut(s) 641, 848, 1255, 1789
MhlI GDGCHC 2 cut(s) 157, 572
MlsI TGGCCA 2 cut(s) 431, 1356
MluNI TGGCCA 2 cut(s) 431, 1356
MlyI GAGTC 5 cut(s) 219, 685, 1104, 1212, 1828
MmeI TCCRAC 2 cut(s) 424, 1332
Mox20I TGGCCA 2 cut(s) 431, 1356
MroXI GAANNNNTTC 1 cut(s) 911
MscI TGGCCA 2 cut(s) 431, 1356
MseI TTAA 6 cut(s) 888, 954, 1124, 1302, 1421, 1862
Msp20I TGGCCA 2 cut(s) 431, 1356
MspI CCGG 3 cut(s) 233, 522, 632
MspR9I CCNGG 3 cut(s) 45, 523, 893
MunI CAATTG 3 cut(s) 864, 881, 1468
Mva1269I GAATGC 1 cut(s) 78
MvaI CCWGG 2 cut(s) 45, 893
MwoI GCNNNNNNNGC 1 cut(s) 1915
NciI CCSGG 1 cut(s) 523
NdeI CATATG 2 cut(s) 564, 1336
NdeII GATC 8 cut(s) 40, 641, 848, 1255, 1385, 1582, 1789, 1930
NheI GCTAGC 1 cut(s) 76
NlaIII CATG 6 cut(s) 209, 276, 372, 862, 906, 1745
NlaIV GGNNCC 4 cut(s) 560, 636, 850, 1747
NmuCI GTSAC 3 cut(s) 19, 1570, 1575
PaeR7I CTCGAG 1 cut(s) 1651
PctI GAATGC 1 cut(s) 78
PdmI GAANNNNTTC 1 cut(s) 911
PfeI GAWTC 6 cut(s) 58, 86, 1171, 1315, 1504, 1938
PflMI CCANNNNNTGG 2 cut(s) 1143, 1642
PfoI TCCNGGA 1 cut(s) 43
PkrI GCNGC 4 cut(s) 114, 296, 320, 356
PleI GAGTC 5 cut(s) 219, 684, 1104, 1212, 1828
PpsI GAGTC 5 cut(s) 219, 684, 1104, 1212, 1828
PsiI TTATAA 1 cut(s) 1236
Psp6I CCWGG 2 cut(s) 43, 891
PspFI CCCAGC 1 cut(s) 697
PspGI CCWGG 2 cut(s) 43, 891
PspN4I GGNNCC 4 cut(s) 560, 636, 850, 1747
PspPI GGNCC 2 cut(s) 558, 1432
PsuI RGATCY 4 cut(s) 641, 848, 1255, 1789
RsaI GTAC 1 cut(s) 286
RsaNI GTAC 1 cut(s) 285
SaqAI TTAA 6 cut(s) 888, 954, 1124, 1302, 1421, 1862
SatI GCNGC 4 cut(s) 113, 295, 319, 355
Sau3AI GATC 8 cut(s) 40, 641, 848, 1255, 1385, 1582, 1789, 1930
Sau96I GGNCC 2 cut(s) 558, 1432
ScaI AGTACT 1 cut(s) 286
SchI GAGTC 5 cut(s) 219, 685, 1104, 1212, 1828
ScrFI CCNGG 3 cut(s) 45, 523, 893
SduI GDGCHC 2 cut(s) 157, 572
Sfr274I CTCGAG 1 cut(s) 1651
SlaI CTCGAG 1 cut(s) 1651
SmlI CTYRAG 7 cut(s) 52, 413, 673, 1402, 1651, 1904, 1992
SmoI CTYRAG 7 cut(s) 52, 413, 673, 1402, 1651, 1904, 1992
SsiI CCGC 2 cut(s) 113, 1823
SspI AATATT 1 cut(s) 705
SspMI CTAG 8 cut(s) 77, 507, 555, 756, 1253, 1532, 1671, 1787
StyD4I CCNGG 3 cut(s) 43, 521, 891
StyI CCWWGG 1 cut(s) 1521
TaaI ACNGT 1 cut(s) 1567
TaiI ACGT 2 cut(s) 900, 1577
TaqI TCGA 4 cut(s) 190, 281, 454, 1652
TatI WGTACW 1 cut(s) 284
TauI GCSGC 1 cut(s) 115
TfiI GAWTC 6 cut(s) 58, 86, 1171, 1315, 1504, 1938
Tru1I TTAA 6 cut(s) 888, 954, 1124, 1302, 1421, 1862
Tru9I TTAA 6 cut(s) 888, 954, 1124, 1302, 1421, 1862
TscAI CASTG 2 cut(s) 850, 944
TseFI GTSAC 3 cut(s) 19, 1570, 1575
TseI GCWGC 3 cut(s) 294, 318, 354
Tsp45I GTSAC 3 cut(s) 19, 1570, 1575
TspDTI ATGAA 3 cut(s) 194, 357, 1577
TspGWI ACGGA 1 cut(s) 174
TspRI CASTG 2 cut(s) 850, 944
Van91I CCANNNNNTGG 2 cut(s) 1143, 1642
XapI RAATTY 6 cut(s) 201, 277, 456, 499, 528, 1449
XbaI TCTAGA 3 cut(s) 1252, 1531, 1786
XhoI CTCGAG 1 cut(s) 1651
XmiI GTMKAC 1 cut(s) 1675
XmnI GAANNNNTTC 1 cut(s) 911
XspI CTAG 8 cut(s) 77, 507, 555, 756, 1253, 1532, 1671, 1787
ZraI GACGTC 1 cut(s) 1575
ZrmI AGTACT 1 cut(s) 286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.