FvH4_6g21371

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000047
Physical Location & Seq
Forward (+)
14946855 .. 14952270
5416 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g21371.t5

Sequence Viewer

Length: 3294 bp
ATGACATGGAATTCGAGTACGGACTGCTGTTCTTGGCTCGGTGTAACTTGCAGCAGTAACGGGTGTGTTGTCGGACTTGACCTCAGCAGGGAGTCTATCTCATGCAGCATTGACAGTTCAAGCAGTCTCTTCCAACTTCAAAATCTTCAGAGCCTCAATTTGGCGTACAACGACTTCAATGGTTCTTCAATTCCATCTGCAATCGGAAGGCTTGCAGACTTGAGGTATCTGAATTTAACCTCTGCTTATTTTTCTGGGCAGATTCCCTTTGAGGTTGCACGCTTAACAAGGCTGGTAACTCTTGATTTCTCTAAAAGTGGTAAACCGTTGCTAGTTGAGAACCCGAATCTAAGAATGCTATTTCAGAATTTCACAGAGCTTGTAGAGCTATATCTTTATTCATCAGTGGACTTATCAACACAGGGGAGTGACTGGTGCGAAGCCATATCTTCTTCACTGCCACATCTGAGGGTGTTGAGCTTGTCTGGCTGTAGTATTCGAGGCCCTCTATGTGAGTCCCTAGCAAACCTTCAATATTTGTACGAGATTGACTTGTCATATAACTCCTTCAATTCTCCGGTTCCAGGAGTCTTTGCCAATCTTTCAAACTTGACTTACCTGAGTCTTTCTAGTTCTAAGTTACTTGGAACATTTCCCAAAGAGATCTTTCAGATACCTTCCATACAAACGATTGACCTGTCCTATAATGATGATCTTCATGGTTCCTTTCCAGAATTTCCAAACAATGGCTCTCTTCGATCCTTAATTGTAGATTCGACGAGTTTTTCAGGTGACCTACCCAACTCTATTGGAAATCTGAAAGCGATTTCAACCATATCTCTTTCACGTTGCAGTTTTACTGGATTCCTCCCCAAGTCGATTGAAAACCTCACACAATTGGTTGACCTGGACATTGCATGGAACAGGTTCAGTAGTCCTATCAGTTCTATTCACTGGGAAAACCTTGTTAATCTGGAAAGCCTCCACTTGAGCTACAATCAACTTTATGGGACTATTCCTTCATCTGTTGTTTCTCTTCCCAAGTTGAGATTCCTTACACTATCCCACAATCGGTTTTCTGGTCAAGTCCCTGATGTTTCCAATACTTCTTCTTACTTACTTGACACCCTTGATTTGGAAAACAACAATTTGGAAGGACAAATACCAACAACCATCTTTAATCTTCAAGGGCTTGCAATTCTGCGTCTTTCTTCAAACAACTTCAGTGGCTTCCCTTTCAATTTTCTTCATCATCAGCCCATAAATCTTATGTTTGTTGATCTTTTCAACAATAGCTTGTTGTTCAATAACCATAGTTCCAATTCGTCCTCCCTTCAGATTAAGACCTTGGTTTTGGCTTCTAACAAGTTGAGAGCATTCCCTGGTTTCTTAAGAGACCAAATCACACTTGATATTTCGAGTTTGAACCTTTCAGGAAACCAGATTCAAGGCGAGATACCTAATTGGATTTTCAGTCTCAAATCTCTCACTTCTCTTGATCTTTCTTGCAACTCCTTGGTGACTCTAGAAGCTCCTCTTCCTAATTCTACATCTGCTTTATCTTCTCTGGACCTTCATTCCAATAAGCTTGTGGATATCCCTTCCTCATACTCATTCCTTCAGCTTGACTCTTTGGTATTAGCTTCTAACAAGTTGAAAACATTCCCAGACTTCTTGAGAAATCAGTCCACATTATACACTTTGGACCTATCAGACAACCAGATTCAAGGACAGATACCCAATTGGATTTGGAGCACCGGTACCAGTTTTTCTCAAGCACGAAATCTTTCATGTAACTCCTTGGATAGTCTTGAAGCTCCTGATCCACCTAATTCTACTTATATTGTGTTATTGCTTGATCTTCACTCAAACCTGCTTCAGGGACAGATACCCTTGTTCTTGAGTGGTCATTATATGGATTATTCGAGAAATAATTTCAACTCTAGCATACCAAATGAAATTGGAGATTTCATTTATGCTAGATCTTACCTTTCCCTTTCAAGCAGTAACTTACATGGGCACATTCCAAAATCAATATGCAATGCAAGTGGTTTAGTTCTTGATCTGTCTAATAATTCTTTGAGTGGAAACATTCCCCAATGTTTAACTGAAGACATTCCCCTTCAATCGAGGGTTGAGAGCAGAAACAAGCTTGATCAAGCAGTTTTCCATACAGTCATGGATTTGAGCAGAAACAAGCTTACTGGATCCATCCCAGATAATTTTCAGAAAGCTTGTAGATTAGAGACTCTTGACCTCAGCAGAAATCAGATACAAGGACAGTTTCCGAAATCACTCATCAACTGCTCAAGTTTAGTGGCTTTGAACCTTGGAAACAATTTCATAACAGATACTTTCCCATGCGTTTTGATGAACATATCCACCTTGGGTGTCCTCGTTTTGCGATCCAACAAGTTTCATGGAAGCATTGGATGTCCAAACACCAATGACACATGGTCTGTGCTTCAAGTAATAGATTTGGCACACAACAGTTTCAGTGGTGAAATGGCTGGAAGAATGTTTCTGAAATGTCAAGCTATGGTGTCTAATAAGGATTCTTCTCCAACTAATCTTGAATATCCTTTTCAGTCGAGCGCCTATAGATTCGACCTTCCCGACTCTTTTTATAGAGATGCAATTACAGCTATCATCAAAGGTTTGGAGTTTCATTTGGTAAAGATTTCGAATATATTCACCTTGGTCGACTTCTCCTCCAACAAATTCAGCGGATCGATACCTGAGGAAATCGGAGAGTTGAAATCACTCTATGTTCTCAACTTATCCAATAATGCTTTCACAGGGAGAATCCCATCATCATTTGGTCAGATGCAACAATTGGAGTCCTTAGATCTCTCAAGCAACCAACTGAGTGGCACAATTCCACAACAGATGGCAAAACTCAGTTTCCTTGCTGTCTTGGATCTCTCAAATAATCAACTGGTTGGGAGAATCCCCACCGGTACTCAGTTTTCTACATTTCCACGTACCTCATTCGAAGGTAACAAAGGATTATGGGGGCCTCCCTTGACAACTGATGCATTGTTGCCGCCACCAACTTCAAATGGAAGCTCGACTCCTCCGAGTTCTGGAAATGAGATTGACTGGAATATTATCTCTGCTGAAATTGGATTTACATGTGGGTTTGGACTTGCGGTTGGGTCACTTTTGTTTTGCAAAAGATGGAGGAAATGGTATTACAGAGCTATGCGTAGTGTTCTTTTCAAGATATTTCCTCCGCTGGAGCAGAGGTTTGGTATTCATAGAAGACATGTTTACATAAACACAAGGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1098

Amino Acids

121.38

Weight (kDa)

5.76

Isoelectric Point (pI)

38.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 33 - 107 4.8e-06 Leucine-rich repeat region
LRR_8 PF13855 179 - 237 5.9e-09 Leucine rich repeat
LRR_14 PF23598 251 - 330 8.1e-06 Leucine-rich repeat region
LRR_8 PF13855 320 - 359 1.9e-06 Leucine rich repeat
LRR_8 PF13855 726 - 780 4.5e-07 Leucine rich repeat
LRR_8 PF13855 747 - 806 9.8e-06 Leucine rich repeat
LRR_14 PF23598 894 - 977 1.2e-07 Leucine-rich repeat region
LRR_8 PF13855 921 - 980 1.1e-10 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1881
Acc65I GGTACC 1 cut(s) 1760
AccB1I GGYRCC 1 cut(s) 1760
AccB7I CCANNNNNTGG 1 cut(s) 746
AccI GTMKAC 1 cut(s) 2703
AciI CCGC 4 cut(s) 2727, 3047, 3152, 3236
AclWI GGATC 7 cut(s) 753, 1817, 2202, 2215, 2400, 2737, 2928
AcsI RAATTY 5 cut(s) 10, 232, 367, 734, 2720
AcuI CTGAAG 6 cut(s) 131, 1207, 1319, 1604, 1862, 2130
AfaI GTAC 6 cut(s) 19, 167, 542, 1762, 2962, 2986
AfiI CCNNNNNNNGG 8 cut(s) 88, 160, 584, 746, 1071, 1135, 1879, 3086
AflII CTTAAG 1 cut(s) 1390
AflIII ACRYGT 2 cut(s) 3134, 3268
AgeI ACCGGT 2 cut(s) 1757, 2957
AhdI GACNNNNNGTC 1 cut(s) 2455
AjnI CCWGG 3 cut(s) 583, 906, 1381
AjuI GAANNNNNNNTTGG 4 cut(s) 1034, 1066, 2777, 2809
Alw21I GWGCWC 1 cut(s) 1757
Alw26I GTCTC 4 cut(s) 131, 1389, 1481, 2240
AlwI GGATC 7 cut(s) 753, 1817, 2202, 2215, 2400, 2737, 2928
AoxI GGCC 2 cut(s) 502, 3017
ApeKI GCWGC 2 cut(s) 51, 105
ApoI RAATTY 5 cut(s) 10, 232, 367, 734, 2720
ArsI GACNNNNNNTTYG 3 cut(s) 27, 1336, 1368
AsiGI ACCGGT 2 cut(s) 1757, 2957
Asp700I GAANNNNTTC 5 cut(s) 926, 1661, 1786, 2115, 2690
Asp718I GGTACC 1 cut(s) 1760
AspLEI GCGC 1 cut(s) 2597
AspS9I GGNCC 4 cut(s) 503, 1570, 1705, 3017
AsuHPI GGTGA 4 cut(s) 803, 1531, 2513, 2686
AsuII TTCGAA 2 cut(s) 2684, 2994
AvaII GGWCC 2 cut(s) 1570, 1705
AxyI CCTNAGG 1 cut(s) 2739
BaeGI GKGCMC 1 cut(s) 2022
BaeI ACNNNNGTAYC 2 cut(s) 1880, 1913
BamHI GGATCC 1 cut(s) 2207
BanI GGYRCC 1 cut(s) 1760
BarI GAAGNNNNNNTAC 4 cut(s) 158, 190, 1146, 1178
BbsI GAAGAC 2 cut(s) 2118, 3271
Bbv12I GWGCWC 1 cut(s) 1757
BbvCI CCTCAGC 2 cut(s) 83, 2258
BbvI GCAGC 2 cut(s) 63, 117
BccI CCATC 6 cut(s) 202, 1181, 2219, 2818, 2884, 3174
BciT130I CCWGG 3 cut(s) 585, 908, 1383
BclI TGATCA 1 cut(s) 2155
BcoDI GTCTC 4 cut(s) 131, 1389, 1481, 2240
BfaI CTAG 6 cut(s) 332, 521, 630, 1526, 1944, 1980
BfmI CTRYAG 2 cut(s) 490, 2599
BfoI RGCGCY 1 cut(s) 2598
BfrI CTTAAG 1 cut(s) 1390
BfuAI ACCTGC 1 cut(s) 1881
BglII AGATCT 3 cut(s) 663, 1982, 2848
BisI GCNGC 3 cut(s) 52, 106, 3047
BlsI GCNGC 3 cut(s) 53, 107, 3048
Bme1390I CCNGG 3 cut(s) 585, 908, 1383
Bme18I GGWCC 2 cut(s) 1570, 1705
BmeRI GACNNNNNGTC 1 cut(s) 2455
BmgT120I GGNCC 4 cut(s) 503, 1570, 1705, 3017
BmiI GGNNCC 5 cut(s) 582, 724, 1762, 2209, 3018
BmrFI CCNGG 3 cut(s) 585, 908, 1383
BmrI ACTGGG 1 cut(s) 964
BmsI GCATC 3 cut(s) 2623, 2817, 3025
BmuI ACTGGG 1 cut(s) 964
BpiI GAAGAC 2 cut(s) 2118, 3271
BplI GAGNNNNNCTC 2 cut(s) 83, 115
BpmI CTGGAG 1 cut(s) 3260
Bpu10I CCTNAGC 2 cut(s) 83, 2258
Bpu14I TTCGAA 2 cut(s) 2684, 2994
BpuEI CTTGAG 7 cut(s) 241, 1009, 1696, 1758, 1921, 2293, 2839
Bsa29I ATCGAT 1 cut(s) 2732
BsaAI YACGTR 1 cut(s) 2984
BsaI GGTCTC 1 cut(s) 1389
BsaJI CCNNGG 7 cut(s) 1347, 1381, 1515, 1800, 2329, 2385, 2697
BsaWI WCCGGW 3 cut(s) 577, 1757, 2957
BsaXI ACNNNNNCTCC 6 cut(s) 1744, 1774, 2696, 2726, 3233, 3263
Bsc4I CCNNNNNNNGG 8 cut(s) 88, 160, 584, 746, 1071, 1135, 1879, 3086
Bse118I RCCGGY 2 cut(s) 1757, 2957
Bse1I ACTGG 7 cut(s) 437, 865, 959, 1764, 2209, 2943, 3107
Bse21I CCTNAGG 1 cut(s) 2739
Bse3DI GCAATG 2 cut(s) 912, 2047
BseBI CCWGG 3 cut(s) 585, 908, 1383
BseCI ATCGAT 1 cut(s) 2732
BseDI CCNNGG 7 cut(s) 1347, 1381, 1515, 1800, 2329, 2385, 2697
BseGI GGATG 2 cut(s) 2211, 2438
BseLI CCNNNNNNNGG 8 cut(s) 88, 160, 584, 746, 1071, 1135, 1879, 3086
BseMI GCAATG 2 cut(s) 912, 2047
BseMII CTCAG 8 cut(s) 97, 458, 611, 2272, 2730, 2858, 2914, 2978
BseNI ACTGG 7 cut(s) 437, 865, 959, 1764, 2209, 2943, 3107
BseRI GAGGAG 3 cut(s) 1524, 2701, 3066
BseSI GKGCMC 1 cut(s) 2022
BseXI GCAGC 2 cut(s) 63, 117
BshFI GGCC 2 cut(s) 504, 3019
BshNI GGYRCC 1 cut(s) 1760
BshTI ACCGGT 2 cut(s) 1757, 2957
BshVI ATCGAT 1 cut(s) 2732
BsiHKAI GWGCWC 1 cut(s) 1757
BsiSI CCGG 3 cut(s) 578, 1758, 2958
BslFI GGGAC 4 cut(s) 502, 1024, 1073, 1896
BslI CCNNNNNNNGG 8 cut(s) 88, 160, 584, 746, 1071, 1135, 1879, 3086
BsmAI GTCTC 4 cut(s) 131, 1389, 1481, 2240
BsmFI GGGAC 4 cut(s) 502, 1024, 1073, 1896
BsmI GAATGC 2 cut(s) 360, 1376
BsnI GGCC 2 cut(s) 504, 3019
Bso31I GGTCTC 1 cut(s) 1389
Bsp119I TTCGAA 2 cut(s) 2684, 2994
Bsp1286I GDGCHC 2 cut(s) 1757, 2022
BspACI CCGC 4 cut(s) 2727, 3047, 3152, 3236
BspANI GGCC 2 cut(s) 504, 3019
BspCNI CTCAG 8 cut(s) 96, 459, 612, 2271, 2731, 2859, 2913, 2977
BspDI ATCGAT 1 cut(s) 2732
BspLI GGNNCC 5 cut(s) 582, 724, 1762, 2209, 3018
BspMI ACCTGC 1 cut(s) 1881
BspPI GGATC 7 cut(s) 753, 1817, 2202, 2215, 2400, 2737, 2928
BspT104I TTCGAA 2 cut(s) 2684, 2994
BspT107I GGYRCC 1 cut(s) 1760
BspTI CTTAAG 1 cut(s) 1390
BspTNI GGTCTC 1 cut(s) 1389
BsrDI GCAATG 2 cut(s) 912, 2047
BsrFI RCCGGY 2 cut(s) 1757, 2957
BsrI ACTGG 7 cut(s) 437, 865, 959, 1764, 2209, 2943, 3107
BssAI RCCGGY 2 cut(s) 1757, 2957
BssECI CCNNGG 7 cut(s) 1347, 1381, 1515, 1800, 2329, 2385, 2697
BssT1I CCWWGG 6 cut(s) 1347, 1515, 1800, 2329, 2385, 2697
Bst2UI CCWGG 3 cut(s) 585, 908, 1383
Bst4CI ACNGT 5 cut(s) 116, 327, 2176, 2283, 2492
Bst6I CTCTTC 4 cut(s) 134, 759, 1041, 1542
BstAFI CTTAAG 1 cut(s) 1390
BstBAI YACGTR 1 cut(s) 2984
BstBI TTCGAA 2 cut(s) 2684, 2994
BstC8I GCNNGC 3 cut(s) 213, 280, 1194
BstEII GGTNACC 1 cut(s) 791
BstENI CCTNNNNNAGG 1 cut(s) 1877
BstF5I GGATG 2 cut(s) 2211, 2438
BstH2I RGCGCY 1 cut(s) 2598
BstHHI GCGC 1 cut(s) 2597
BstMAI GTCTC 4 cut(s) 131, 1389, 1481, 2240
BstMWI GCNNNNNNNGC 3 cut(s) 385, 486, 2642
BstNI CCWGG 3 cut(s) 585, 908, 1383
BstNSI RCATGY 2 cut(s) 3138, 3272
BstPI GGTNACC 1 cut(s) 791
BstSCI CCNGG 3 cut(s) 583, 906, 1381
BstSFI CTRYAG 2 cut(s) 490, 2599
BstSLI GKGCMC 1 cut(s) 2022
BstV1I GCAGC 2 cut(s) 63, 117
BstV2I GAAGAC 2 cut(s) 2118, 3271
BstX2I RGATCY 5 cut(s) 663, 1982, 2207, 2848, 2920
BstXI CCANNNNNNTGG 1 cut(s) 2870
BstYI RGATCY 5 cut(s) 663, 1982, 2207, 2848, 2920
Bsu15I ATCGAT 1 cut(s) 2732
Bsu36I CCTNAGG 1 cut(s) 2739
BsuRI GGCC 2 cut(s) 504, 3019
BsuTUI ATCGAT 1 cut(s) 2732
BtsCI GGATG 2 cut(s) 2211, 2438
BtsI GCAGTG 1 cut(s) 455
BtsIMutI CAGTG 5 cut(s) 411, 455, 952, 1231, 2503
BveI ACCTGC 1 cut(s) 1881
Cac8I GCNNGC 3 cut(s) 213, 280, 1194
CfoI GCGC 1 cut(s) 2597
Cfr10I RCCGGY 2 cut(s) 1757, 2957
Cfr13I GGNCC 4 cut(s) 503, 1570, 1705, 3017
ClaI ATCGAT 1 cut(s) 2732
CseI GACGC 1 cut(s) 1193
Csp6I GTAC 6 cut(s) 18, 166, 541, 1761, 2961, 2985
CspAI ACCGGT 2 cut(s) 1757, 2957
CspCI CAANNNNNGTGG 6 cut(s) 1207, 1242, 2029, 2064, 2298, 2333
CviQI GTAC 6 cut(s) 18, 166, 541, 1761, 2961, 2985
DriI GACNNNNNGTC 1 cut(s) 2455
Eam1104I CTCTTC 4 cut(s) 134, 759, 1041, 1542
Eam1105I GACNNNNNGTC 1 cut(s) 2455
EarI CTCTTC 4 cut(s) 134, 759, 1041, 1542
Eco130I CCWWGG 6 cut(s) 1347, 1515, 1800, 2329, 2385, 2697
Eco31I GGTCTC 1 cut(s) 1389
Eco32I GATATC 1 cut(s) 1597
Eco47I GGWCC 2 cut(s) 1570, 1705
Eco57I CTGAAG 6 cut(s) 131, 1207, 1319, 1604, 1862, 2130
Eco81I CCTNAGG 1 cut(s) 2739
Eco91I GGTNACC 1 cut(s) 791
EcoNI CCTNNNNNAGG 1 cut(s) 1877
EcoO109I RGGNCCY 2 cut(s) 503, 3017
EcoO65I GGTNACC 1 cut(s) 791
EcoRI GAATTC 1 cut(s) 10
EcoRII CCWGG 3 cut(s) 583, 906, 1381
EcoRV GATATC 1 cut(s) 1597
EcoT14I CCWWGG 6 cut(s) 1347, 1515, 1800, 2329, 2385, 2697
EcoT22I ATGCAT 1 cut(s) 3040
ErhI CCWWGG 6 cut(s) 1347, 1515, 1800, 2329, 2385, 2697
FalI AAGNNNNNCTT 2 cut(s) 1521, 1553
FaqI GGGAC 4 cut(s) 502, 1024, 1073, 1896
FbaI TGATCA 1 cut(s) 2155
FblI GTMKAC 1 cut(s) 2703
Fnu4HI GCNGC 3 cut(s) 52, 106, 3047
FokI GGATG 2 cut(s) 2198, 2445
Fsp4HI GCNGC 3 cut(s) 52, 106, 3047
FspBI CTAG 6 cut(s) 332, 521, 630, 1526, 1944, 1980
GlaI GCGC 1 cut(s) 2596
GluI GCNGC 3 cut(s) 52, 106, 3047
GsuI CTGGAG 1 cut(s) 3260
HaeII RGCGCY 1 cut(s) 2598
HaeIII GGCC 2 cut(s) 504, 3019
HapII CCGG 3 cut(s) 578, 1758, 2958
HgaI GACGC 1 cut(s) 1193
HhaI GCGC 1 cut(s) 2597
Hin6I GCGC 1 cut(s) 2595
HinP1I GCGC 1 cut(s) 2595
HincII GTYRAC 2 cut(s) 904, 2704
HindII GTYRAC 2 cut(s) 904, 2704
HindIII AAGCTT 4 cut(s) 1586, 2150, 2198, 2232
HpaII CCGG 3 cut(s) 578, 1758, 2958
HphI GGTGA 4 cut(s) 803, 1531, 2513, 2686
Hpy166II GTNNAC 6 cut(s) 323, 409, 904, 1689, 2704, 3274
Hpy8I GTNNAC 6 cut(s) 323, 409, 904, 1689, 2704, 3274
Hpy99I CGWCG 1 cut(s) 781
HpyCH4III ACNGT 5 cut(s) 116, 327, 2176, 2283, 2492
HpyCH4IV ACGT 2 cut(s) 847, 2983
HpyF10VI GCNNNNNNNGC 3 cut(s) 385, 486, 2642
HpySE526I ACGT 2 cut(s) 847, 2983
HspAI GCGC 1 cut(s) 2595
KpnI GGTACC 1 cut(s) 1764
Ksp22I TGATCA 1 cut(s) 2155
LmnI GCTCC 4 cut(s) 1537, 1752, 1822, 3241
Lsp1109I GCAGC 2 cut(s) 63, 117
LweI GCATC 3 cut(s) 2623, 2817, 3025
MaeI CTAG 6 cut(s) 332, 521, 630, 1526, 1944, 1980
MaeII ACGT 2 cut(s) 847, 2983
MfeI CAATTG 3 cut(s) 896, 1741, 2834
MflI RGATCY 5 cut(s) 663, 1982, 2207, 2848, 2920
MhlI GDGCHC 2 cut(s) 1757, 2022
MmeI TCCRAC 5 cut(s) 52, 157, 2433, 2588, 2739
Mph1103I ATGCAT 1 cut(s) 3040
MroXI GAANNNNTTC 5 cut(s) 926, 1661, 1786, 2115, 2690
MseI TTAA 8 cut(s) 236, 284, 764, 969, 1179, 1341, 1391, 2105
MspA1I CMGCKG 2 cut(s) 2727, 3238
MspCI CTTAAG 1 cut(s) 1390
MspI CCGG 3 cut(s) 578, 1758, 2958
MspR9I CCNGG 3 cut(s) 585, 908, 1383
MunI CAATTG 3 cut(s) 896, 1741, 2834
Mva1269I GAATGC 2 cut(s) 360, 1376
MvaI CCWGG 3 cut(s) 585, 908, 1383
MwoI GCNNNNNNNGC 3 cut(s) 385, 486, 2642
NlaIV GGNNCC 5 cut(s) 582, 724, 1762, 2209, 3018
NmuCI GTSAC 4 cut(s) 428, 791, 1519, 3159
NsiI ATGCAT 1 cut(s) 3040
NspI RCATGY 2 cut(s) 3138, 3272
NspV TTCGAA 2 cut(s) 2684, 2994
PciI ACATGT 2 cut(s) 3134, 3268
PcsI WCGNNNNNNNCGW 2 cut(s) 2613, 3077
PctI GAATGC 2 cut(s) 360, 1376
PdmI GAANNNNTTC 5 cut(s) 926, 1661, 1786, 2115, 2690
PflMI CCANNNNNTGG 1 cut(s) 746
PfoI TCCNGGA 1 cut(s) 583
PinAI ACCGGT 2 cut(s) 1757, 2957
PkrI GCNGC 3 cut(s) 53, 107, 3048
Ppu21I YACGTR 1 cut(s) 2984
PscI ACATGT 2 cut(s) 3134, 3268
Psp6I CCWGG 3 cut(s) 583, 906, 1381
PspEI GGTNACC 1 cut(s) 791
PspGI CCWGG 3 cut(s) 583, 906, 1381
PspN4I GGNNCC 5 cut(s) 582, 724, 1762, 2209, 3018
PspPI GGNCC 4 cut(s) 503, 1570, 1705, 3017
PsuI RGATCY 5 cut(s) 663, 1982, 2207, 2848, 2920
RsaI GTAC 6 cut(s) 19, 167, 542, 1762, 2962, 2986
RsaNI GTAC 6 cut(s) 18, 166, 541, 1761, 2961, 2985
SalI GTCGAC 1 cut(s) 2702
SaqAI TTAA 8 cut(s) 236, 284, 764, 969, 1179, 1341, 1391, 2105
SatI GCNGC 3 cut(s) 52, 106, 3047
Sau96I GGNCC 4 cut(s) 503, 1570, 1705, 3017
ScrFI CCNGG 3 cut(s) 585, 908, 1383
SduI GDGCHC 2 cut(s) 1757, 2022
SfaNI GCATC 3 cut(s) 2623, 2817, 3025
SfcI CTRYAG 2 cut(s) 490, 2599
SfuI TTCGAA 2 cut(s) 2684, 2994
SinI GGWCC 2 cut(s) 1570, 1705
SmlI CTYRAG 8 cut(s) 220, 988, 1390, 1675, 1773, 1900, 2308, 2854
SmoI CTYRAG 8 cut(s) 220, 988, 1390, 1675, 1773, 1900, 2308, 2854
SsiI CCGC 4 cut(s) 2727, 3047, 3152, 3236
SspI AATATT 2 cut(s) 536, 3109
SspMI CTAG 6 cut(s) 332, 521, 630, 1526, 1944, 1980
StyD4I CCNGG 3 cut(s) 583, 906, 1381
StyI CCWWGG 6 cut(s) 1347, 1515, 1800, 2329, 2385, 2697
TaaI ACNGT 5 cut(s) 116, 327, 2176, 2283, 2492
TaiI ACGT 2 cut(s) 850, 2986
TauI GCSGC 1 cut(s) 3049
Tru1I TTAA 8 cut(s) 236, 284, 764, 969, 1179, 1341, 1391, 2105
Tru9I TTAA 8 cut(s) 236, 284, 764, 969, 1179, 1341, 1391, 2105
TscAI CASTG 5 cut(s) 411, 462, 959, 1231, 2503
TseFI GTSAC 4 cut(s) 428, 791, 1519, 3159
TseI GCWGC 2 cut(s) 51, 105
Tsp45I GTSAC 4 cut(s) 428, 791, 1519, 3159
TspGWI ACGGA 1 cut(s) 35
TspRI CASTG 5 cut(s) 411, 462, 959, 1231, 2503
Van91I CCANNNNNTGG 1 cut(s) 746
Vha464I CTTAAG 1 cut(s) 1390
VpaK11BI GGWCC 2 cut(s) 1570, 1705
XagI CCTNNNNNAGG 1 cut(s) 1877
XapI RAATTY 5 cut(s) 10, 232, 367, 734, 2720
XbaI TCTAGA 1 cut(s) 1525
XceI RCATGY 2 cut(s) 3138, 3272
XcmI CCANNNNNNNNNTGG 1 cut(s) 1588
XmiI GTMKAC 1 cut(s) 2703
XmnI GAANNNNTTC 5 cut(s) 926, 1661, 1786, 2115, 2690
XspI CTAG 6 cut(s) 332, 521, 630, 1526, 1944, 1980
Zsp2I ATGCAT 1 cut(s) 3040
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.