Rroxscaffold_4G00303460

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000047
Physical Location & Seq
Reverse (-)
23885708 .. 23888703
2996 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00303460.1

Sequence Viewer

Length: 2985 bp
ATGAAAACTTTGCTACATTTCTTCCTTCTCTTGATCACATTCTGGATCAGTATCATCATCCCACCAGTTCACAGCCAGTGTATTAAAGACCAGCAACTATTACTGCTCCAATTCAAGAAAAGCCTCGTGTTCAATCATTCCACGAAGCTTATTACTTGGAATGCAAATATTGATTGTTGTTCTTGGGTGGGCGTCACTTGCGGCCGTAATGGGCGTGTTCTGGGTCTTGACATAAGCAGCGAACAGATCTCAGCTCGAATTGACAATTCCAGCAGTCTCTTTCGTCTTCATTATCTTCAAAGCCTCAATTTGGCGGGCAACCGTCTTGGCAATTACTCTCAATCAATTCCATCCGTCATCGGAGATCTCCTGAACTTGAGGTATCTGAATTTATCTCGTAATTATTATTCAGGGAAAATTCCCATCGAGATTTCTCGCTTGAGGAGGTTGGAAGTCCTTGATTTTTCTAACAATTGGGGTTTAAACCTTAAAAGTTCAAATTTACACATGTTGGTTCAAAACTTGACAGAGCTTAGAGAGTTATATCTTGATGGGGTCCAAATATCAGAACGGGGGAGTGAGTGGTGCCGAGCCGTATCATCTTCCCTTCCCAACCTCAGGGTCTTAAGCATGTCCAGGTGTGATCTCTCAGGCCCTCTTCTCGAGTCCCTTACTAAGCTTCAGTCTCTATCTGTAATTAGGTTGGGCATGAACAATTTCCCTGCACCAGTTCCAGGATTCTTTGCCAACTTTTCAAACTTGACTGTATTGAGTCTCATAGAGTGCGGGTTGCATGGAACATTTCCCAAAGAGGTCTTTCAGTTACCTTCTCTACAAAGTATTGAACTTTCAGATAATGACCACCTTGATGGGTCCTTGCCAGAGTTCCCGAGGAATGGATCTCTTCGGCACCTAGATCTAAGCTGGACAAAATTTTCAGGGTTATTGCCAAATTCTATTGGCAATCTCAAAATGTTGTCCACCGTATATATTATAGATTGCAATTTCACCGGATCGATGCCCAAGTCAATGACAAACCTTACACAATTGGTTTTTTTGTCAATGTCTCGTAACAATTTGGAAGGTTCAATTCCGTCATTCAGTGGGGCCAAGAATATGGTCGTCATAGACCTTTCCTACAACGGTCTAACAGGTACTGTTAATTCCACCCACTGGAGAAACCTTACAAAGCTGTTTTTTCTCAGTTTGGGATCCAATAAGCTCGATGGGAATATCCCAGCATCTTTTTTTCTCTTGCCCTTTTATCTTTCCAACAATCAATTCTCTGGGAATATCCCAGCATCTCTGTTTTTTCTTCCCCTGTCGGAATACCTACATCTTTCCAGCAATCAATTCTCTGGTCCATTCCCTGAAATTTCAAATGTGTCTTCCTACTTGCTGAATGGTCCTGATCTTGAACTTGATTTGAGAAATCAATCTAACTTATCTTATTTGGACCTTTCAGAGAACCAAATAAATGGCAAGATACCCGACTGGATTTGGAGTTTAAGTAATCCGTATCTCCTAAATCTTTCTTGCAACTCCCTAGATTCTCTAGAAGTTCATTCAATTAATTTCACTAATCTAGCTTACCTTGACCTTCATTCCAACCAGTTTCATGGGCAAATCCCAATTTTTCCATCACCTTGCAGTGTCTATTATCTAGACTTCTCCAGGAATTATTTCAGCTCTATCATGCCGAGTACCATTGGGGATGTGTTTCTTAACACAACATTTGTCTCGCTTTCGAGCAATAACCTCAATGGGATCATTCCAGAATCATTATGCAATTCACAATTTCTTGAGTTTCTTGATCTGTCCAATAATTCTTTGAGTGGTTCAGTTCCCCAATGCTTAACTACAATGAGGAGTCTTGCATTTCTCAACGTAAAGAGAAACAATCTTACAAATGTTGACGACTTCTCTCAGAATTGCCTGTTAAGAACACTAGACATTAGTGAAAATCACCTTCAAGGCCGGTTTCTGAAATCTCTTGTCAACTGCACCCGGTTAGAGGTTTTAAACCTTGGAAACAATTTGATAACAGAACCATTTCCATGCTTTTTGAGGAACTTGGCCACCTTACGTGTCCTTATCTTGCGATCCAATAAATTTTATGGGCACATTGGATGTCGCAAGACTGATGGCACTTGGCCAGTACTTCAAATCATAGACTTGGCTCACAACAATTTGAGTGGTGAAGTACCTGGAACAGCTTTGACAACTTGGCAGGCGATGAGGACTAGCGAAGATGATGCCCCACACAAGATCAAGAACCTCCCACCTCTGGAATTTGGATTTTATTATCGAGTAGATACAATTACAGTTACCAACAAAGGCTTAGAGATGAAGCTGGAGTTTGTTTTAGCTATCTTCACCTCCATTGACTTCTCGTGCAACAAGTTCAACGGATCAATACCCAAGGAAATTGGAGAACTCAAATCATTGTATGCGCTCAACTTATCCAACAATGCTTTCACTGGTGCAGTTCCATCATCACTAAGTAATTTGAGTCAGCTAGAGTCCTTGGACCTCTCAAAAAACAAATTGAGCGGTCAAATTCCACCGGAGCTTACAAAACTCACTTTCCTTGCATTGTTGAATCTCTCATATAATCAATTAGTCGGGAGGATACCAAGCGGTGCTCAATTTTCAACATTTGATGCAGCTTCCTTCGAAGGTAATAAAGGATTATGGGGGCCTCCTTTAACAGCAGATAATAACACAGGGTTCTCACCACCAAAGCCAGAAGGAAACCATTCAAATCCTGGACATGAGATTGATTGGGATATTATCTGTCCTGAAATTGGGTTTACATGTGGGTTTGGGATTGCCATCGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTATTACAGAGCTATGTATAACATGCTTCTAAAGATATTCCCTCAGCTGGAACAAAGATTTGGTCATCACAGGAGACATGTCTATGTACATCAAAGATACTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

994

Amino Acids

111.76

Weight (kDa)

7.98

Isoelectric Point (pI)

40.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 67 2.5e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 84 - 185 5.8e-08 Leucine-rich repeat region
LRR_14 PF23598 301 - 365 1.6e-07 Leucine-rich repeat region
LRR_8 PF13855 815 - 874 1.3e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 585, 909
AccB7I CCANNNNNTGG 1 cut(s) 1173
AccBSI CCGCTC 1 cut(s) 2553
AciI CCGC 5 cut(s) 201, 314, 786, 2553, 2640
AclWI GGATC 8 cut(s) 53, 907, 1021, 1206, 1219, 1775, 2097, 2419
AcoI YGGCCR 3 cut(s) 202, 2076, 2153
AcsI RAATTY 9 cut(s) 388, 417, 499, 932, 952, 1374, 2111, 2291, 2559
AcuI CTGAAG 1 cut(s) 665
AcyI GRCGYC 1 cut(s) 192
AfaI GTAC 5 cut(s) 1156, 1705, 2160, 2205, 2961
AfiI CCNNNNNNNGG 9 cut(s) 310, 618, 734, 896, 1173, 2014, 2287, 2807, 2920
AflII CTTAAG 1 cut(s) 625
AflIII ACRYGT 4 cut(s) 507, 2086, 2816, 2950
AjnI CCWGG 5 cut(s) 635, 733, 1673, 2206, 2767
AjuI GAANNNNNNNTTGG 6 cut(s) 1265, 1297, 2459, 2491, 2916, 2948
Alw21I GWGCWC 1 cut(s) 2647
Alw26I GTCTC 7 cut(s) 281, 690, 779, 1071, 1744, 2941, 2971
AlwI GGATC 8 cut(s) 53, 907, 1021, 1206, 1219, 1775, 2097, 2419
AlwNI CAGNNNCTG 1 cut(s) 1157
Ama87I CYCGRG 2 cut(s) 662, 889
AoxI GGCC 7 cut(s) 202, 652, 1107, 1975, 2076, 2153, 2699
ApeKI GCWGC 2 cut(s) 237, 2666
ApoI RAATTY 9 cut(s) 388, 417, 499, 932, 952, 1374, 2111, 2291, 2559
ArsI GACNNNNNNTTYG 2 cut(s) 2920, 2952
AseI ATTAAT 1 cut(s) 1572
Asp700I GAANNNNTTC 4 cut(s) 716, 1682, 2052, 2758
AspLEI GCGC 1 cut(s) 2455
AspS9I GGNCC 9 cut(s) 556, 653, 873, 1107, 1361, 1406, 1456, 2530, 2699
AsuC2I CCSGG 1 cut(s) 2008
AsuHPI GGTGA 6 cut(s) 1000, 1635, 1958, 2210, 2368, 2727
AsuII TTCGAA 1 cut(s) 2676
AvaI CYCGRG 2 cut(s) 662, 889
AvaII GGWCC 6 cut(s) 556, 873, 1361, 1406, 1456, 2530
AxyI CCTNAGG 1 cut(s) 617
BaeGI GKGCMC 1 cut(s) 2124
BalI TGGCCA 2 cut(s) 2078, 2155
BamHI GGATCC 1 cut(s) 1211
BanI GGYRCC 2 cut(s) 585, 909
BauI CACGAG 2 cut(s) 125, 2392
BbsI GAAGAC 2 cut(s) 278, 1380
Bbv12I GWGCWC 1 cut(s) 2647
BbvCI CCTCAGC 1 cut(s) 2916
BbvI GCAGC 2 cut(s) 249, 2678
BceAI ACGGC 2 cut(s) 189, 578
BcgI CGANNNNNNTGC 2 cut(s) 2237, 2271
BciT130I CCWGG 5 cut(s) 637, 735, 1675, 2208, 2769
BciVI GTATCC 1 cut(s) 2625
BclI TGATCA 1 cut(s) 33
BcnI CCSGG 1 cut(s) 2008
BcoDI GTCTC 7 cut(s) 281, 690, 779, 1071, 1744, 2941, 2971
BfaI CTAG 8 cut(s) 914, 1547, 1556, 1586, 1664, 1949, 2244, 2519
BfrI CTTAAG 1 cut(s) 625
BfuI GTATCC 1 cut(s) 2625
BglII AGATCT 3 cut(s) 246, 364, 916
BisI GCNGC 3 cut(s) 202, 238, 2667
BlsI GCNGC 3 cut(s) 203, 239, 2668
BmcAI AGTACT 1 cut(s) 2160
Bme1390I CCNGG 6 cut(s) 637, 735, 1675, 2008, 2208, 2769
Bme18I GGWCC 6 cut(s) 556, 873, 1361, 1406, 1456, 2530
BmeT110I CYCGRG 2 cut(s) 662, 889
BmgT120I GGNCC 9 cut(s) 556, 653, 873, 1107, 1361, 1406, 1456, 2530, 2699
BmiI GGNNCC 7 cut(s) 557, 587, 874, 911, 1108, 1213, 2700
BmrFI CCNGG 6 cut(s) 637, 735, 1675, 2008, 2208, 2769
BmsI GCATC 5 cut(s) 1008, 1250, 1310, 2245, 2653
BpiI GAAGAC 2 cut(s) 278, 1380
BpmI CTGGAG 3 cut(s) 1195, 1657, 2375
Bpu10I CCTNAGC 1 cut(s) 2916
Bpu14I TTCGAA 1 cut(s) 2676
BpuEI CTTGAG 3 cut(s) 397, 460, 1823
BpuMI CCSGG 1 cut(s) 2008
Bsa29I ATCGAT 1 cut(s) 1016
BsaAI YACGTR 1 cut(s) 2087
BsaBI GATNNNNATC 2 cut(s) 50, 2834
BsaHI GRCGYC 1 cut(s) 192
BsaJI CCNNGG 4 cut(s) 890, 2026, 2421, 2526
BsaWI WCCGGW 2 cut(s) 1010, 2566
BsaXI ACNNNNNCTCC 2 cut(s) 1495, 1525
Bsc4I CCNNNNNNNGG 9 cut(s) 310, 618, 734, 896, 1173, 2014, 2287, 2807, 2920
Bse118I RCCGGY 1 cut(s) 1977
Bse1I ACTGG 9 cut(s) 65, 76, 728, 1178, 1499, 1612, 2156, 2485, 2978
Bse21I CCTNAGG 1 cut(s) 617
Bse8I GATNNNNATC 2 cut(s) 50, 2834
BseBI CCWGG 5 cut(s) 637, 735, 1675, 2208, 2769
BseCI ATCGAT 1 cut(s) 1016
BseDI CCNNGG 4 cut(s) 890, 2026, 2421, 2526
BseGI GGATG 4 cut(s) 57, 350, 1720, 2135
BseJI GATNNNNATC 2 cut(s) 50, 2834
BseLI CCNNNNNNNGG 9 cut(s) 310, 618, 734, 896, 1173, 2014, 2287, 2807, 2920
BseMII CTCAG 6 cut(s) 264, 631, 663, 1216, 1940, 2930
BseNI ACTGG 9 cut(s) 65, 76, 728, 1178, 1499, 1612, 2156, 2485, 2978
BseRI GAGGAG 2 cut(s) 457, 1882
BseSI GKGCMC 1 cut(s) 2124
BseX3I CGGCCG 1 cut(s) 202
BseXI GCAGC 2 cut(s) 249, 2678
BseYI CCCAGC 2 cut(s) 1237, 1297
BsgI GTGCAG 3 cut(s) 708, 1987, 2505
Bsh1285I CGRYCG 1 cut(s) 205
BshFI GGCC 7 cut(s) 204, 654, 1109, 1977, 2078, 2155, 2701
BshNI GGYRCC 2 cut(s) 585, 909
BshVI ATCGAT 1 cut(s) 1016
BsiEI CGRYCG 1 cut(s) 205
BsiHKAI GWGCWC 1 cut(s) 2647
BsiHKCI CYCGRG 2 cut(s) 662, 889
BsiSI CCGG 4 cut(s) 1011, 1978, 2008, 2567
BslFI GGGAC 1 cut(s) 652
BslI CCNNNNNNNGG 9 cut(s) 310, 618, 734, 896, 1173, 2014, 2287, 2807, 2920
BsmAI GTCTC 7 cut(s) 281, 690, 779, 1071, 1744, 2941, 2971
BsmBI CGTCTC 1 cut(s) 2971
BsmFI GGGAC 1 cut(s) 652
BsmI GAATGC 1 cut(s) 166
BsnI GGCC 7 cut(s) 204, 654, 1109, 1977, 2078, 2155, 2701
BsoBI CYCGRG 2 cut(s) 662, 889
Bsp119I TTCGAA 1 cut(s) 2676
Bsp1286I GDGCHC 2 cut(s) 2124, 2647
Bsp1407I TGTACA 1 cut(s) 2959
BspACI CCGC 5 cut(s) 201, 314, 786, 2553, 2640
BspANI GGCC 7 cut(s) 204, 654, 1109, 1977, 2078, 2155, 2701
BspCNI CTCAG 6 cut(s) 263, 630, 662, 1215, 1939, 2929
BspDI ATCGAT 1 cut(s) 1016
BspLI GGNNCC 7 cut(s) 557, 587, 874, 911, 1108, 1213, 2700
BspPI GGATC 8 cut(s) 53, 907, 1021, 1206, 1219, 1775, 2097, 2419
BspT104I TTCGAA 1 cut(s) 2676
BspT107I GGYRCC 2 cut(s) 585, 909
BspTI CTTAAG 1 cut(s) 625
BsrBI CCGCTC 1 cut(s) 2553
BsrFI RCCGGY 1 cut(s) 1977
BsrGI TGTACA 1 cut(s) 2959
BsrI ACTGG 9 cut(s) 65, 76, 728, 1178, 1499, 1612, 2156, 2485, 2978
BssAI RCCGGY 1 cut(s) 1977
BssECI CCNNGG 4 cut(s) 890, 2026, 2421, 2526
BssNI GRCGYC 1 cut(s) 192
BssSI CACGAG 2 cut(s) 125, 2392
BssT1I CCWWGG 3 cut(s) 2026, 2421, 2526
Bst2BI CACGAG 2 cut(s) 125, 2392
Bst2UI CCWGG 5 cut(s) 637, 735, 1675, 2208, 2769
Bst4CI ACNGT 6 cut(s) 323, 766, 985, 1145, 1159, 2326
Bst6I CTCTTC 2 cut(s) 663, 909
BstACI GRCGYC 1 cut(s) 192
BstAFI CTTAAG 1 cut(s) 625
BstAUI TGTACA 1 cut(s) 2959
BstBAI YACGTR 1 cut(s) 2087
BstBI TTCGAA 1 cut(s) 2676
BstC8I GCNNGC 2 cut(s) 316, 2232
BstF5I GGATG 4 cut(s) 57, 350, 1720, 2135
BstHHI GCGC 1 cut(s) 2455
BstMAI GTCTC 7 cut(s) 281, 690, 779, 1071, 1744, 2941, 2971
BstMCI CGRYCG 1 cut(s) 205
BstMWI GCNNNNNNNGC 1 cut(s) 198
BstNI CCWGG 5 cut(s) 637, 735, 1675, 2208, 2769
BstNSI RCATGY 5 cut(s) 511, 634, 2820, 2899, 2954
BstSCI CCNGG 6 cut(s) 635, 733, 1673, 2006, 2206, 2767
BstSLI GKGCMC 1 cut(s) 2124
BstV1I GCAGC 2 cut(s) 249, 2678
BstV2I GAAGAC 2 cut(s) 278, 1380
BstX2I RGATCY 5 cut(s) 246, 364, 899, 916, 1211
BstXI CCANNNNNNTGG 4 cut(s) 869, 1117, 1478, 1619
BstYI RGATCY 5 cut(s) 246, 364, 899, 916, 1211
BstZI CGGCCG 1 cut(s) 202
Bsu15I ATCGAT 1 cut(s) 1016
Bsu36I CCTNAGG 1 cut(s) 617
BsuI GTATCC 1 cut(s) 2625
BsuRI GGCC 7 cut(s) 204, 654, 1109, 1977, 2078, 2155, 2701
BsuTUI ATCGAT 1 cut(s) 1016
BtgZI GCGATG 1 cut(s) 2249
BtsCI GGATG 4 cut(s) 57, 350, 1720, 2135
BtsI GCAGTG 1 cut(s) 1657
BtsIMutI CAGTG 5 cut(s) 83, 1108, 1171, 1657, 2478
Cac8I GCNNGC 2 cut(s) 316, 2232
CaiI CAGNNNCTG 1 cut(s) 1157
CfoI GCGC 1 cut(s) 2455
Cfr10I RCCGGY 1 cut(s) 1977
Cfr13I GGNCC 9 cut(s) 556, 653, 873, 1107, 1361, 1406, 1456, 2530, 2699
ClaI ATCGAT 1 cut(s) 1016
CseI GACGC 1 cut(s) 181
Csp6I GTAC 5 cut(s) 1155, 1704, 2159, 2204, 2960
CspCI CAANNNNNGTGG 2 cut(s) 2176, 2211
CviQI GTAC 5 cut(s) 1155, 1704, 2159, 2204, 2960
DraI TTTAAA 2 cut(s) 483, 2022
EaeI YGGCCR 3 cut(s) 202, 2076, 2153
EagI CGGCCG 1 cut(s) 202
Eam1104I CTCTTC 2 cut(s) 663, 909
EarI CTCTTC 2 cut(s) 663, 909
EclXI CGGCCG 1 cut(s) 202
Eco130I CCWWGG 3 cut(s) 2026, 2421, 2526
Eco47I GGWCC 6 cut(s) 556, 873, 1361, 1406, 1456, 2530
Eco52I CGGCCG 1 cut(s) 202
Eco57I CTGAAG 1 cut(s) 665
Eco81I CCTNAGG 1 cut(s) 617
Eco88I CYCGRG 2 cut(s) 662, 889
EcoO109I RGGNCCY 3 cut(s) 653, 873, 2699
EcoRII CCWGG 5 cut(s) 635, 733, 1673, 2206, 2767
EcoT14I CCWWGG 3 cut(s) 2026, 2421, 2526
ErhI CCWWGG 3 cut(s) 2026, 2421, 2526
Esp3I CGTCTC 1 cut(s) 2971
FaqI GGGAC 1 cut(s) 652
FauI CCCGC 2 cut(s) 307, 779
FbaI TGATCA 1 cut(s) 33
Fnu4HI GCNGC 3 cut(s) 202, 238, 2667
FokI GGATG 4 cut(s) 44, 337, 1727, 2142
Fsp4HI GCNGC 3 cut(s) 202, 238, 2667
FspBI CTAG 8 cut(s) 914, 1547, 1556, 1586, 1664, 1949, 2244, 2519
GlaI GCGC 1 cut(s) 2454
GluI GCNGC 3 cut(s) 202, 238, 2667
GsaI CCCAGC 2 cut(s) 1241, 1301
GsuI CTGGAG 3 cut(s) 1195, 1657, 2375
HaeIII GGCC 7 cut(s) 204, 654, 1109, 1977, 2078, 2155, 2701
HapII CCGG 4 cut(s) 1011, 1978, 2008, 2567
HgaI GACGC 1 cut(s) 181
HhaI GCGC 1 cut(s) 2455
Hin1I GRCGYC 1 cut(s) 192
Hin6I GCGC 1 cut(s) 2453
HinP1I GCGC 1 cut(s) 2453
HincII GTYRAC 2 cut(s) 1915, 1999
HindII GTYRAC 2 cut(s) 1915, 1999
HindIII AAGCTT 2 cut(s) 146, 677
HinfI GANTC 9 cut(s) 665, 738, 772, 1550, 1778, 1870, 2512, 2522, 2602
HpaII CCGG 4 cut(s) 1011, 1978, 2008, 2567
HphI GGTGA 6 cut(s) 1000, 1635, 1958, 2210, 2368, 2727
Hpy166II GTNNAC 5 cut(s) 70, 981, 1915, 1999, 2814
Hpy188I TCNGA 8 cut(s) 362, 387, 568, 853, 1327, 1465, 1929, 1986
Hpy8I GTNNAC 5 cut(s) 70, 981, 1915, 1999, 2814
HpyAV CCTTC 9 cut(s) 35, 617, 837, 1076, 1610, 1979, 2672, 2683, 2744
HpyCH4III ACNGT 6 cut(s) 323, 766, 985, 1145, 1159, 2326
HpyCH4IV ACGT 3 cut(s) 1887, 2086, 2980
HpyF10VI GCNNNNNNNGC 1 cut(s) 198
HpySE526I ACGT 3 cut(s) 1887, 2086, 2980
Hsp92I GRCGYC 1 cut(s) 192
HspAI GCGC 1 cut(s) 2453
Ksp22I TGATCA 1 cut(s) 33
LmnI GCTCC 2 cut(s) 111, 2569
Lsp1109I GCAGC 2 cut(s) 249, 2678
LweI GCATC 5 cut(s) 1008, 1250, 1310, 2245, 2653
MaeI CTAG 8 cut(s) 914, 1547, 1556, 1586, 1664, 1949, 2244, 2519
MaeII ACGT 3 cut(s) 1887, 2086, 2980
MaeIII GTNAC 5 cut(s) 193, 822, 1070, 2326, 2841
MbiI CCGCTC 1 cut(s) 2553
MfeI CAATTG 2 cut(s) 472, 1046
MflI RGATCY 5 cut(s) 246, 364, 899, 916, 1211
MhlI GDGCHC 2 cut(s) 2124, 2647
MlsI TGGCCA 2 cut(s) 2078, 2155
MluNI TGGCCA 2 cut(s) 2078, 2155
MlyI GAGTC 5 cut(s) 674, 781, 1879, 2521, 2531
MmeI TCCRAC 5 cut(s) 429, 1296, 1305, 1632, 2490
Mox20I TGGCCA 2 cut(s) 2078, 2155
MroXI GAANNNNTTC 4 cut(s) 716, 1682, 2052, 2758
MscI TGGCCA 2 cut(s) 2078, 2155
MslI CAYNNNNRTG 3 cut(s) 867, 2056, 2955
Msp20I TGGCCA 2 cut(s) 2078, 2155
MspA1I CMGCKG 1 cut(s) 2920
MspCI CTTAAG 1 cut(s) 625
MspI CCGG 4 cut(s) 1011, 1978, 2008, 2567
MspR9I CCNGG 6 cut(s) 637, 735, 1675, 2008, 2208, 2769
MssI GTTTAAAC 1 cut(s) 483
MunI CAATTG 2 cut(s) 472, 1046
Mva1269I GAATGC 1 cut(s) 166
MvaI CCWGG 5 cut(s) 637, 735, 1675, 2208, 2769
MwoI GCNNNNNNNGC 1 cut(s) 198
NciI CCSGG 1 cut(s) 2008
NlaIV GGNNCC 7 cut(s) 557, 587, 874, 911, 1108, 1213, 2700
NmeAIII GCCGAG 2 cut(s) 614, 1725
NmuCI GTSAC 2 cut(s) 193, 2841
NspI RCATGY 5 cut(s) 511, 634, 2820, 2899, 2954
NspV TTCGAA 1 cut(s) 2676
PaeR7I CTCGAG 1 cut(s) 662
PciI ACATGT 3 cut(s) 507, 2816, 2950
PctI GAATGC 1 cut(s) 166
PdmI GAANNNNTTC 4 cut(s) 716, 1682, 2052, 2758
PfeI GAWTC 4 cut(s) 738, 1550, 1778, 2602
PflMI CCANNNNNTGG 1 cut(s) 1173
PfoI TCCNGGA 3 cut(s) 733, 1673, 2767
PkrI GCNGC 3 cut(s) 203, 239, 2668
PleI GAGTC 5 cut(s) 673, 780, 1878, 2520, 2530
PmeI GTTTAAAC 1 cut(s) 483
PpsI GAGTC 5 cut(s) 673, 780, 1878, 2520, 2530
Ppu21I YACGTR 1 cut(s) 2087
PpuMI RGGWCCY 1 cut(s) 873
PscI ACATGT 3 cut(s) 507, 2816, 2950
PshBI ATTAAT 1 cut(s) 1572
Psp5II RGGWCCY 1 cut(s) 873
Psp6I CCWGG 5 cut(s) 635, 733, 1673, 2206, 2767
PspFI CCCAGC 2 cut(s) 1237, 1297
PspGI CCWGG 5 cut(s) 635, 733, 1673, 2206, 2767
PspN4I GGNNCC 7 cut(s) 557, 587, 874, 911, 1108, 1213, 2700
PspPI GGNCC 9 cut(s) 556, 653, 873, 1107, 1361, 1406, 1456, 2530, 2699
PspPPI RGGWCCY 1 cut(s) 873
PstNI CAGNNNCTG 1 cut(s) 1157
PsuI RGATCY 5 cut(s) 246, 364, 899, 916, 1211
PvuII CAGCTG 1 cut(s) 2920
RsaI GTAC 5 cut(s) 1156, 1705, 2160, 2205, 2961
RsaNI GTAC 5 cut(s) 1155, 1704, 2159, 2204, 2960
RseI CAYNNNNRTG 3 cut(s) 867, 2056, 2955
SatI GCNGC 3 cut(s) 202, 238, 2667
Sau96I GGNCC 9 cut(s) 556, 653, 873, 1107, 1361, 1406, 1456, 2530, 2699
ScaI AGTACT 1 cut(s) 2160
SchI GAGTC 5 cut(s) 674, 781, 1879, 2521, 2531
ScrFI CCNGG 6 cut(s) 637, 735, 1675, 2008, 2208, 2769
SduI GDGCHC 2 cut(s) 2124, 2647
SfaNI GCATC 5 cut(s) 1008, 1250, 1310, 2245, 2653
Sfr274I CTCGAG 1 cut(s) 662
SfuI TTCGAA 1 cut(s) 2676
SinI GGWCC 6 cut(s) 556, 873, 1361, 1406, 1456, 2530
SlaI CTCGAG 1 cut(s) 662
SmiMI CAYNNNNRTG 3 cut(s) 867, 2056, 2955
SmlI CTYRAG 5 cut(s) 376, 439, 625, 662, 1802
SmoI CTYRAG 5 cut(s) 376, 439, 625, 662, 1802
SsiI CCGC 5 cut(s) 201, 314, 786, 2553, 2640
SspI AATATT 1 cut(s) 169
SspMI CTAG 8 cut(s) 914, 1547, 1556, 1586, 1664, 1949, 2244, 2519
StyD4I CCNGG 6 cut(s) 635, 733, 1673, 2006, 2206, 2767
StyI CCWWGG 3 cut(s) 2026, 2421, 2526
TaaI ACNGT 6 cut(s) 323, 766, 985, 1145, 1159, 2326
TaiI ACGT 3 cut(s) 1890, 2089, 2983
TaqI TCGA 8 cut(s) 256, 426, 663, 1016, 1224, 1748, 2308, 2676
TatI WGTACW 2 cut(s) 2158, 2959
TauI GCSGC 1 cut(s) 204
TfiI GAWTC 4 cut(s) 738, 1550, 1778, 2602
TscAI CASTG 5 cut(s) 83, 1108, 1178, 1657, 2485
TseFI GTSAC 2 cut(s) 193, 2841
TseI GCWGC 2 cut(s) 237, 2666
Tsp45I GTSAC 2 cut(s) 193, 2841
TspDTI ATGAA 7 cut(s) 17, 278, 725, 1553, 1592, 1607, 2363
TspGWI ACGGA 4 cut(s) 343, 1083, 1506, 2424
TspRI CASTG 5 cut(s) 83, 1108, 1178, 1657, 2485
Van91I CCANNNNNTGG 1 cut(s) 1173
Vha464I CTTAAG 1 cut(s) 625
VpaK11BI GGWCC 6 cut(s) 556, 873, 1361, 1406, 1456, 2530
VspI ATTAAT 1 cut(s) 1572
XapI RAATTY 9 cut(s) 388, 417, 499, 932, 952, 1374, 2111, 2291, 2559
XbaI TCTAGA 2 cut(s) 1555, 1663
XceI RCATGY 5 cut(s) 511, 634, 2820, 2899, 2954
XcmI CCANNNNNNNNNTGG 1 cut(s) 2765
XhoI CTCGAG 1 cut(s) 662
XmnI GAANNNNTTC 4 cut(s) 716, 1682, 2052, 2758
XspI CTAG 8 cut(s) 914, 1547, 1556, 1586, 1664, 1949, 2244, 2519
ZrmI AGTACT 1 cut(s) 2160
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.