MD12G1173400.v1.1

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
OG0000047
Physical Location & Seq
Forward (+)
25355624 .. 25358791
3168 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1173400.v1.1.491

Sequence Viewer

Length: 3168 bp
ATGAAAACTCCTCTGCTTTCATGGCTTTTCTTACTCCGCATTTGCTATGTTTCACTCACCTTCCATACGTTTGTGGTCTCTACCCAATGTCCCGGCGATCAGCAATCTTTGCTGCTAAAATTGAAGGACAGCCTCACATTTGACCCTGCAACGTCTCGAAAACTTGTGAAGTGGAACAATGCCTCGGACTACTGCTCTTGGGAAGGAGTGTCCTGCAAACAGGGTTGTGTTTCGAATCTGGACTTGAGCAACGAGGCGATTACTGGGGGACTTGATAATTCCAGTCCTCTTTTCGGTCTGAAGTCGATCGAGAACCTGAATTTGGCTTACAACAACTTCAACTACACTCAGATTCCTTCCGAGTTCAAGCAGCTAACAGGTTTGACCAATCTGAACTTGTCGAATGCTGGCTTTGCGGAGCAGGTTCCGATTGAGATTTCGCACTTGACGAGGTTGGTAACTCTTGATTTGTCTACCCTCGTTATTCAGTTGAATCTTGAGAAGCCGAATTTGAAAGTGCTCATTCGGAACTTTTCTGAGCTTGTTAAACTTTATCTTGATGGCGTGAATATATCAGCACAGGGGACTGAATGGTGCCAAGCTATATCATCTTCACTGCCAAAATTGAGGGTGCTGAGCTTGTCCGCTTGTTCTCTTTCAGGCCCTATTGATAGTTCATTACTGAAGCTTCAATCGCTCTCGGTTATTCGTTTAGATTACAATGATTTCTCTATTCAAGTTCCTGAGTTCTTCTCAAAGTTCCCAAATTTGACTTCCTTGCACCTAAGCGATTCTGGCTTATATGGTACATTCCCAGAGAAGATCTTCCAGGTACCTACACTACAGACTATTGACTTATCTTCGAATCCACAGCTTCAGGGTTCCTTACCAGAATTTCCAAAGAATGCATCTCTTCGGTCCTTGGTTCTAAGGAGGGCTAACTTTTCAGGGTTTCTACCGAACTCTATTGGCAACCTCAAAATGTTGTCCAACATAGATATTTCGTGGTGCAATTTCATTGGATCAATCCCAAGGTCAACAGAACACCTTCATCAATTGGTTAATTTTGACTTGCAAGGGAATGAGTTCAATGGTTCAGTTCCATCCTTCAGTATGGCAAAGAATCTAACCTCGATATATCTTTATAACAATCTACTTGATGGGACTATTCCGTCATCTCTGTTTTCTCTTCCCATGCTGCAACATTTAGACCTTTCTAACAATCTACTTGATGGGACTATTCCGTCATCTCTGTTTTCTCTTCCCATGCTGCAACATTTATACCTTTCTTACAATCACTTCTCTGGCCAGTTACCTGAATTTGGTAATTTTTCTTCCCTACAAGTCCTTGATTTGAGTAGCAATAGTTTGGAAGGGCCTATACCCATGTCCATCTTTAATCTACGACAGCTTCATTTTCTCTCACTTTCTTCAAACAACTTCAGTGGGTCCTTTCTGCTTAATGATATTCAACAACTGAAAAATCTCCAAGAACTTTATCTTTCATACAATAGCTTGCTAATTAATCATTACAGTTCCAATTCCTCCTACTCCTGTCCTCAACTTCGCACATTGAAATTAGCTGCTGGAAAGTTGAGAACCTTTCCTGATTTCTTGAGAAATCAATCAATATTAGAGGTTTTGGACCTATCCCTAAACCAGATCCATGAAATACCCAACTGGATTTGGAGGCTTAGTACTCTTGGTGAACTAAATCTTTCTTGCAACTCTCTGGTAAATCTACCAGGTCCTTTCCTCAATCTTTCTTTCTCTGTGCTTGACCTTCATTCCAACCAGCTTCAGGGACCAATTCCAATGCTTCCACCATATGCCGGTTATCTGGATTACTCAAGAAATAATTTCAGCTCAAGCATACCGGCAGAAATTGGTGATTTCCTTGTGAGCACTGTGTTCTTCTCTCTTGCAAGTAATCACATCCACGGGATCATTCCAGAATCAGTATGCAAGGCGACATCTCTTGAGGTTCTTGATCTGTCCAATAATTCCTTAAGTGGCATGATTCCCCAGTGCTTGACTGCAAGGAACGGGCCTCTTGCAGTACTTGATTTAAGGAGAAACAAACTTTCTGGCACTCTTCCTGATAATTTTCCTGAGAACTGTAGTCTACAAACTCTAGACCTCAATGGCAATGTGATTGGTGGTCAGTTCCCAAAATCTCTAACCAACTGCACAATGTTAGAGGTGTTAAACCTGGGAAACAATCAGATAACAGATGTCTTTCCATGCTCATTGCAGAACATATCCAGCTTGCGTGTACTTGTCTTGCGTTTCAACAAATTTTATGATAGCATTGAATGCCTCAAGACTAAAAGAGACTGGCCAAAGCTTCAAATTATTGACTTAGCTCGCAACAATTTTACTGGCGAAATACCAGGAAGTTTTTTGAAAACGTGGCAAGCAATGATGGCTGACAAAGATGGTGCCGTGTCAAAGATTAATCACCTCCAATTTCAAGTTTTAGTCAACGGCCAGGTGTACTATCAGGATACCGTAACAGTTACCACCAAAGGTCAAGAGATGGAATTGGCAAGGATCTTAACAGTCTTCACCTCAATTGACATCTCCTGCAACAATTTTAATGGATCAATACCTGAGGAAGTGGGAAAGCTCACATCACTTCATGGCCTAAACTTGTCCAGTAATGCTCTCACAGGCGCAATCCCATCATCATTAGGTAATCTACGACAGCTTGAGTCCTTAGACCTTTCGGACAACAAATTGAGCGGAACAATTCCATCACAACTTTCCAAACTTAATTTCCTCTCATTCCTAAATCTGTCGAGCAATCAACTTGTCGGGAAGATTCCAACCGGCACTCAGATTCAGTCTTTTTCAGCAGATTCTTTCGCAGGCAATAAAGGATTATATGGGCCACCGTTAGATGACGGATCACCAAGGTTGCCACCAACATTAGAAGGCAAACATTCTAATTCTGCGCACAGAATTGATTGGGATCTTATCAGTGTTGAAGTTGGATTTATTGTTGGCTTTGGAGTTGCGGTCGGGTCACTTGTGTTGTGCAAGAGATGGAGTAAATGGTATTACAAAACAATGTATAAAATCCTTGTTAAGATATTCCCTCAGCTTGAAGATAGAATTGGTCCTCACCGAAGACATGTCCACATAAATCAGAGGTTCAGACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1056

Amino Acids

117.19

Weight (kDa)

6.73

Isoelectric Point (pI)

39.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 72 7.1e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 108 - 286 1.1e-07 Leucine-rich repeat region
LRR_8 PF13855 375 - 434 4.1e-10 Leucine rich repeat
LRR_14 PF23598 393 - 501 1.3e-07 Leucine-rich repeat region
LRR_8 PF13855 520 - 578 5.9e-06 Leucine rich repeat
LRR_8 PF13855 708 - 767 2.6e-08 Leucine rich repeat
LRR_4 PF12799 732 - 774 8.2e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 857 - 914 2e-07 Leucine rich repeat
LRR_14 PF23598 863 - 935 4e-06 Leucine-rich repeat region
LRR_8 PF13855 879 - 938 2.6e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1146
AasI GACNNNNNNGTC 2 cut(s) 1171, 1243
Acc16I TGCGCA 1 cut(s) 2958
Acc36I ACCTGC 1 cut(s) 412
Acc65I GGTACC 1 cut(s) 832
AccB1I GGYRCC 3 cut(s) 594, 832, 2441
AccBSI CCGCTC 1 cut(s) 2745
AccI GTMKAC 2 cut(s) 473, 2125
AciI CCGC 5 cut(s) 37, 416, 645, 2745, 3020
AclWI GGATC 7 cut(s) 1030, 1657, 1952, 2561, 2611, 2917, 2982
AcoI YGGCCR 3 cut(s) 1306, 2339, 2488
AcsI RAATTY 6 cut(s) 319, 508, 766, 893, 1319, 2297
AcuI CTGAAG 6 cut(s) 320, 704, 860, 1093, 1426, 1784
AfaI GTAC 6 cut(s) 808, 834, 1699, 2061, 2277, 2498
AfiI CCNNNNNNNGG 5 cut(s) 293, 322, 1322, 1801, 1832
AflII CTTAAG 1 cut(s) 2008
AflIII ACRYGT 1 cut(s) 3136
AjnI CCWGG 5 cut(s) 828, 1744, 2211, 2392, 2490
AjuI GAANNNNNNNTTGG 8 cut(s) 305, 337, 757, 789, 2762, 2794, 3102, 3134
Alw21I GWGCWC 2 cut(s) 522, 1907
Alw26I GTCTC 3 cut(s) 82, 159, 2328
AlwI GGATC 7 cut(s) 1030, 1657, 1952, 2561, 2611, 2917, 2982
AlwNI CAGNNNCTG 1 cut(s) 3165
AoxI GGCC 8 cut(s) 661, 1306, 1376, 2048, 2339, 2488, 2644, 2891
ApeKI GCWGC 5 cut(s) 112, 370, 1198, 1270, 1583
ApoI RAATTY 6 cut(s) 319, 508, 766, 893, 1319, 2297
AseI ATTAAT 2 cut(s) 1524, 2457
Asp700I GAANNNNTTC 3 cut(s) 824, 1047, 1085
Asp718I GGTACC 1 cut(s) 832
AspLEI GCGC 2 cut(s) 2678, 2959
AsuC2I CCSGG 1 cut(s) 93
AsuHPI GGTGA 7 cut(s) 49, 1718, 1901, 2453, 2560, 2904, 3119
AsuII TTCGAA 2 cut(s) 233, 863
AvaII GGWCC 6 cut(s) 918, 1449, 1645, 1748, 1805, 3122
AxyI CCTNAGG 1 cut(s) 2613
BalI TGGCCA 2 cut(s) 1308, 2341
BanI GGYRCC 3 cut(s) 594, 832, 2441
BarI GAAGNNNNNNTAC 4 cut(s) 1318, 1350, 1365, 1397
BbsI GAAGAC 2 cut(s) 2557, 3139
Bbv12I GWGCWC 2 cut(s) 522, 1907
BbvCI CCTCAGC 1 cut(s) 3102
BbvI GCAGC 5 cut(s) 99, 382, 1185, 1257, 1570
BceAI ACGGC 2 cut(s) 2429, 2503
BciT130I CCWGG 5 cut(s) 830, 1746, 2213, 2394, 2492
BciVI GTATCC 1 cut(s) 2500
BcnI CCSGG 1 cut(s) 93
BcoDI GTCTC 3 cut(s) 82, 159, 2328
BfaI CTAG 1 cut(s) 2135
BfmI CTRYAG 2 cut(s) 842, 2119
BfrI CTTAAG 1 cut(s) 2008
BfuAI ACCTGC 1 cut(s) 412
BfuI GTATCC 1 cut(s) 2500
BglII AGATCT 1 cut(s) 822
BisI GCNGC 5 cut(s) 113, 371, 1199, 1271, 1584
BlpI GCTNAGC 1 cut(s) 635
BlsI GCNGC 5 cut(s) 114, 372, 1200, 1272, 1585
BmcAI AGTACT 2 cut(s) 1699, 2061
Bme1390I CCNGG 6 cut(s) 93, 830, 1746, 2213, 2394, 2492
Bme18I GGWCC 6 cut(s) 918, 1449, 1645, 1748, 1805, 3122
BmiI GGNNCC 7 cut(s) 426, 596, 834, 883, 1450, 1806, 2443
BmrFI CCNGG 6 cut(s) 93, 830, 1746, 2213, 2394, 2492
BmrI ACTGGG 2 cut(s) 273, 2020
BmsI GCATC 1 cut(s) 917
BmuI ACTGGG 2 cut(s) 273, 2020
BpiI GAAGAC 2 cut(s) 2557, 3139
BplI GAGNNNNNCTC 2 cut(s) 737, 769
Bpu10I CCTNAGC 2 cut(s) 785, 3102
Bpu1102I GCTNAGC 1 cut(s) 635
Bpu14I TTCGAA 2 cut(s) 233, 863
BpuEI CTTGAG 8 cut(s) 265, 518, 1636, 1834, 1852, 2000, 2306, 2732
BpuMI CCSGG 1 cut(s) 93
BsaBI GATNNNNATC 1 cut(s) 2973
BsaI GGTCTC 1 cut(s) 82
BsaJI CCNNGG 6 cut(s) 183, 921, 1031, 1939, 2212, 2915
BsaXI ACNNNNNCTCC 4 cut(s) 1681, 1711, 3006, 3036
Bsc4I CCNNNNNNNGG 5 cut(s) 293, 322, 1322, 1801, 1832
Bse118I RCCGGY 3 cut(s) 1832, 1876, 2831
Bse1I ACTGG 8 cut(s) 268, 282, 1309, 1685, 2026, 2342, 2386, 2658
Bse21I CCTNAGG 1 cut(s) 2613
Bse3DI GCAATG 3 cut(s) 2155, 2249, 2427
Bse8I GATNNNNATC 1 cut(s) 2973
BseBI CCWGG 5 cut(s) 830, 1746, 2213, 2394, 2492
BseDI CCNNGG 6 cut(s) 183, 921, 1031, 1939, 2212, 2915
BseGI GGATG 2 cut(s) 1103, 1935
BseJI GATNNNNATC 1 cut(s) 2973
BseLI CCNNNNNNNGG 5 cut(s) 293, 322, 1322, 1801, 1832
BseMI GCAATG 3 cut(s) 2155, 2249, 2427
BseMII CTCAG 8 cut(s) 362, 528, 626, 735, 2103, 2604, 2852, 3116
BseNI ACTGG 8 cut(s) 268, 282, 1309, 1685, 2026, 2342, 2386, 2658
BseXI GCAGC 5 cut(s) 99, 382, 1185, 1257, 1570
BsgI GTGCAG 1 cut(s) 2173
Bsh1285I CGRYCG 2 cut(s) 309, 3024
BshFI GGCC 8 cut(s) 663, 1308, 1378, 2050, 2341, 2490, 2646, 2893
BshNI GGYRCC 3 cut(s) 594, 832, 2441
BsiEI CGRYCG 2 cut(s) 309, 3024
BsiHKAI GWGCWC 2 cut(s) 522, 1907
BsiSI CCGG 4 cut(s) 93, 1833, 1877, 2832
BslFI GGGAC 6 cut(s) 75, 282, 598, 1177, 1249, 1818
BslI CCNNNNNNNGG 5 cut(s) 293, 322, 1322, 1801, 1832
BsmAI GTCTC 3 cut(s) 82, 159, 2328
BsmBI CGTCTC 1 cut(s) 159
BsmFI GGGAC 6 cut(s) 75, 282, 598, 1177, 1249, 1818
BsmI GAATGC 3 cut(s) 409, 910, 2321
BsnI GGCC 8 cut(s) 663, 1308, 1378, 2050, 2341, 2490, 2646, 2893
Bso31I GGTCTC 1 cut(s) 82
Bsp119I TTCGAA 2 cut(s) 233, 863
Bsp1286I GDGCHC 2 cut(s) 522, 1907
Bsp1720I GCTNAGC 1 cut(s) 635
BspACI CCGC 5 cut(s) 37, 416, 645, 2745, 3020
BspANI GGCC 8 cut(s) 663, 1308, 1378, 2050, 2341, 2490, 2646, 2893
BspCNI CTCAG 8 cut(s) 361, 529, 627, 736, 2104, 2605, 2851, 3115
BspLI GGNNCC 7 cut(s) 426, 596, 834, 883, 1450, 1806, 2443
BspMI ACCTGC 1 cut(s) 412
BspPI GGATC 7 cut(s) 1030, 1657, 1952, 2561, 2611, 2917, 2982
BspT104I TTCGAA 2 cut(s) 233, 863
BspT107I GGYRCC 3 cut(s) 594, 832, 2441
BspTI CTTAAG 1 cut(s) 2008
BspTNI GGTCTC 1 cut(s) 82
BsrBI CCGCTC 1 cut(s) 2745
BsrDI GCAATG 3 cut(s) 2155, 2249, 2427
BsrFI RCCGGY 3 cut(s) 1832, 1876, 2831
BsrI ACTGG 8 cut(s) 268, 282, 1309, 1685, 2026, 2342, 2386, 2658
BssAI RCCGGY 3 cut(s) 1832, 1876, 2831
BssECI CCNNGG 6 cut(s) 183, 921, 1031, 1939, 2212, 2915
BssT1I CCWWGG 3 cut(s) 921, 1031, 2915
Bst2UI CCWGG 5 cut(s) 830, 1746, 2213, 2394, 2492
Bst4CI ACNGT 7 cut(s) 1535, 1909, 2120, 2512, 2518, 2563, 2898
Bst6I CTCTTC 4 cut(s) 918, 1194, 1266, 2100
BstAFI CTTAAG 1 cut(s) 2008
BstAPI GCANNNNNTGC 2 cut(s) 109, 2316
BstBI TTCGAA 2 cut(s) 233, 863
BstC8I GCNNGC 6 cut(s) 409, 1517, 2270, 2368, 2418, 2872
BstDSI CCRYGG 1 cut(s) 1939
BstF5I GGATG 2 cut(s) 1103, 1935
BstHHI GCGC 2 cut(s) 2678, 2959
BstMAI GTCTC 3 cut(s) 82, 159, 2328
BstMCI CGRYCG 2 cut(s) 309, 3024
BstMWI GCNNNNNNNGC 7 cut(s) 22, 109, 413, 694, 795, 2316, 2426
BstNI CCWGG 5 cut(s) 830, 1746, 2213, 2394, 2492
BstNSI RCATGY 1 cut(s) 3140
BstSCI CCNGG 6 cut(s) 91, 828, 1744, 2211, 2392, 2490
BstSFI CTRYAG 2 cut(s) 842, 2119
BstV1I GCAGC 5 cut(s) 99, 382, 1185, 1257, 1570
BstV2I GAAGAC 2 cut(s) 2557, 3139
BstX2I RGATCY 4 cut(s) 822, 1662, 2553, 2974
BstYI RGATCY 4 cut(s) 822, 1662, 2553, 2974
Bsu36I CCTNAGG 1 cut(s) 2613
BsuI GTATCC 1 cut(s) 2500
BsuRI GGCC 8 cut(s) 663, 1308, 1378, 2050, 2341, 2490, 2646, 2893
BtgI CCRYGG 1 cut(s) 1939
BtsCI GGATG 2 cut(s) 1103, 1935
BtsI GCAGTG 1 cut(s) 614
BtsIMutI CAGTG 5 cut(s) 614, 1450, 1905, 2033, 2989
BveI ACCTGC 1 cut(s) 412
Cac8I GCNNGC 6 cut(s) 409, 1517, 2270, 2368, 2418, 2872
CaiI CAGNNNCTG 1 cut(s) 3165
CfoI GCGC 2 cut(s) 2678, 2959
Cfr10I RCCGGY 3 cut(s) 1832, 1876, 2831
CsiI ACCWGGT 1 cut(s) 1744
Csp6I GTAC 6 cut(s) 807, 833, 1698, 2060, 2276, 2497
CspCI CAANNNNNGTGG 2 cut(s) 1426, 1461
CviAII CATG 9 cut(s) 21, 1195, 1267, 1387, 1667, 2017, 2244, 2642, 3137
CviQI GTAC 6 cut(s) 807, 833, 1698, 2060, 2276, 2497
DrdI GACNNNNNNGTC 2 cut(s) 1171, 1243
DseDI GACNNNNNNGTC 2 cut(s) 1171, 1243
EaeI YGGCCR 3 cut(s) 1306, 2339, 2488
Eam1104I CTCTTC 4 cut(s) 918, 1194, 1266, 2100
EarI CTCTTC 4 cut(s) 918, 1194, 1266, 2100
Eco130I CCWWGG 3 cut(s) 921, 1031, 2915
Eco31I GGTCTC 1 cut(s) 82
Eco47I GGWCC 6 cut(s) 918, 1449, 1645, 1748, 1805, 3122
Eco57I CTGAAG 6 cut(s) 320, 704, 860, 1093, 1426, 1784
Eco81I CCTNAGG 1 cut(s) 2613
EcoO109I RGGNCCY 4 cut(s) 662, 1376, 1449, 1748
EcoRII CCWGG 5 cut(s) 828, 1744, 2211, 2392, 2490
EcoT14I CCWWGG 3 cut(s) 921, 1031, 2915
EcoT22I ATGCAT 1 cut(s) 910
ErhI CCWWGG 3 cut(s) 921, 1031, 2915
Esp3I CGTCTC 1 cut(s) 159
FaeI CATG 9 cut(s) 24, 1198, 1270, 1390, 1670, 2020, 2247, 2645, 3140
FaqI GGGAC 6 cut(s) 75, 282, 598, 1177, 1249, 1818
FatI CATG 9 cut(s) 20, 1194, 1266, 1386, 1666, 2016, 2243, 2641, 3136
FauNDI CATATG 1 cut(s) 1828
FblI GTMKAC 2 cut(s) 473, 2125
Fnu4HI GCNGC 5 cut(s) 113, 371, 1199, 1271, 1584
FokI GGATG 2 cut(s) 1090, 1922
Fsp4HI GCNGC 5 cut(s) 113, 371, 1199, 1271, 1584
FspBI CTAG 1 cut(s) 2135
FspI TGCGCA 1 cut(s) 2958
GlaI GCGC 2 cut(s) 2677, 2958
GluI GCNGC 5 cut(s) 113, 371, 1199, 1271, 1584
HaeIII GGCC 8 cut(s) 663, 1308, 1378, 2050, 2341, 2490, 2646, 2893
HapII CCGG 4 cut(s) 93, 1833, 1877, 2832
HhaI GCGC 2 cut(s) 2678, 2959
Hin1II CATG 9 cut(s) 24, 1198, 1270, 1390, 1670, 2020, 2247, 2645, 3140
Hin6I GCGC 2 cut(s) 2676, 2957
HinP1I GCGC 2 cut(s) 2676, 2957
HincII GTYRAC 2 cut(s) 1038, 2485
HindII GTYRAC 2 cut(s) 1038, 2485
HindIII AAGCTT 2 cut(s) 686, 2345
HpaII CCGG 4 cut(s) 93, 1833, 1877, 2832
HphI GGTGA 7 cut(s) 49, 1718, 1901, 2453, 2560, 2904, 3119
Hpy166II GTNNAC 8 cut(s) 474, 1038, 1709, 2126, 2276, 2485, 2497, 3142
Hpy8I GTNNAC 8 cut(s) 474, 1038, 1709, 2126, 2276, 2485, 2497, 3142
HpyAV CCTTC 9 cut(s) 70, 118, 197, 366, 1058, 1117, 1367, 1793, 2930
HpyCH4III ACNGT 7 cut(s) 1535, 1909, 2120, 2512, 2518, 2563, 2898
HpyCH4IV ACGT 3 cut(s) 68, 152, 2411
HpyF10VI GCNNNNNNNGC 7 cut(s) 22, 109, 413, 694, 795, 2316, 2426
HpySE526I ACGT 3 cut(s) 68, 152, 2411
Hsp92II CATG 9 cut(s) 24, 1198, 1270, 1390, 1670, 2020, 2247, 2645, 3140
HspAI GCGC 2 cut(s) 2676, 2957
KpnI GGTACC 1 cut(s) 836
LmnI GCTCC 1 cut(s) 418
Lsp1109I GCAGC 5 cut(s) 99, 382, 1185, 1257, 1570
LweI GCATC 1 cut(s) 917
MabI ACCWGGT 1 cut(s) 1744
MaeI CTAG 1 cut(s) 2135
MaeII ACGT 3 cut(s) 68, 152, 2411
MaeIII GTNAC 5 cut(s) 457, 1311, 2512, 2518, 3027
MbiI CCGCTC 1 cut(s) 2745
MfeI CAATTG 2 cut(s) 1055, 2574
MflI RGATCY 4 cut(s) 822, 1662, 2553, 2974
MhlI GDGCHC 2 cut(s) 522, 1907
MlsI TGGCCA 2 cut(s) 1308, 2341
MluNI TGGCCA 2 cut(s) 1308, 2341
MlyI GAGTC 1 cut(s) 2723
MmeI TCCRAC 4 cut(s) 1014, 1815, 2852, 2974
Mox20I TGGCCA 2 cut(s) 1308, 2341
Mph1103I ATGCAT 1 cut(s) 910
MroXI GAANNNNTTC 3 cut(s) 824, 1047, 1085
MscI TGGCCA 2 cut(s) 1308, 2341
Msp20I TGGCCA 2 cut(s) 1308, 2341
MspCI CTTAAG 1 cut(s) 2008
MspI CCGG 4 cut(s) 93, 1833, 1877, 2832
MspR9I CCNGG 6 cut(s) 93, 830, 1746, 2213, 2394, 2492
MunI CAATTG 2 cut(s) 1055, 2574
Mva1269I GAATGC 3 cut(s) 409, 910, 2321
MvaI CCWGG 5 cut(s) 830, 1746, 2213, 2394, 2492
MwoI GCNNNNNNNGC 7 cut(s) 22, 109, 413, 694, 795, 2316, 2426
NciI CCSGG 1 cut(s) 93
NdeI CATATG 1 cut(s) 1828
NlaIII CATG 9 cut(s) 24, 1198, 1270, 1390, 1670, 2020, 2247, 2645, 3140
NlaIV GGNNCC 7 cut(s) 426, 596, 834, 883, 1450, 1806, 2443
NmuCI GTSAC 1 cut(s) 3027
NsbI TGCGCA 1 cut(s) 2958
NsiI ATGCAT 1 cut(s) 910
NspI RCATGY 1 cut(s) 3140
NspV TTCGAA 2 cut(s) 233, 863
PciI ACATGT 1 cut(s) 3136
PcsI WCGNNNNNNNCGW 1 cut(s) 446
PctI GAATGC 3 cut(s) 409, 910, 2321
PdmI GAANNNNTTC 3 cut(s) 824, 1047, 1085
PkrI GCNGC 5 cut(s) 114, 372, 1200, 1272, 1585
Ple19I CGATCG 1 cut(s) 309
PleI GAGTC 1 cut(s) 2722
PpsI GAGTC 1 cut(s) 2722
PpuMI RGGWCCY 2 cut(s) 1449, 1748
PscI ACATGT 1 cut(s) 3136
PshBI ATTAAT 2 cut(s) 1524, 2457
PsiI TTATAA 1 cut(s) 1146
Psp5II RGGWCCY 2 cut(s) 1449, 1748
Psp6I CCWGG 5 cut(s) 828, 1744, 2211, 2392, 2490
PspGI CCWGG 5 cut(s) 828, 1744, 2211, 2392, 2490
PspN4I GGNNCC 7 cut(s) 426, 596, 834, 883, 1450, 1806, 2443
PspPPI RGGWCCY 2 cut(s) 1449, 1748
PstNI CAGNNNCTG 1 cut(s) 3165
PsuI RGATCY 4 cut(s) 822, 1662, 2553, 2974
PvuI CGATCG 1 cut(s) 309
RsaI GTAC 6 cut(s) 808, 834, 1699, 2061, 2277, 2498
RsaNI GTAC 6 cut(s) 807, 833, 1698, 2060, 2276, 2497
SatI GCNGC 5 cut(s) 113, 371, 1199, 1271, 1584
ScaI AGTACT 2 cut(s) 1699, 2061
SchI GAGTC 1 cut(s) 2723
ScrFI CCNGG 6 cut(s) 93, 830, 1746, 2213, 2394, 2492
SduI GDGCHC 2 cut(s) 522, 1907
SexAI ACCWGGT 1 cut(s) 1744
SfaNI GCATC 1 cut(s) 917
SfcI CTRYAG 2 cut(s) 842, 2119
SfuI TTCGAA 2 cut(s) 233, 863
SinI GGWCC 6 cut(s) 918, 1449, 1645, 1748, 1805, 3122
SmlI CTYRAG 9 cut(s) 244, 497, 1615, 1849, 1867, 1979, 2008, 2321, 2711
SmoI CTYRAG 9 cut(s) 244, 497, 1615, 1849, 1867, 1979, 2008, 2321, 2711
SsiI CCGC 5 cut(s) 37, 416, 645, 2745, 3020
SspI AATATT 1 cut(s) 1632
SspMI CTAG 1 cut(s) 2135
StyD4I CCNGG 6 cut(s) 91, 828, 1744, 2211, 2392, 2490
StyI CCWWGG 3 cut(s) 921, 1031, 2915
TaaI ACNGT 7 cut(s) 1535, 1909, 2120, 2512, 2518, 2563, 2898
TaiI ACGT 3 cut(s) 71, 155, 2414
TaqI TCGA 8 cut(s) 157, 233, 305, 309, 401, 863, 1133, 2801
TaqII GACCGA 2 cut(s) 284, 906
TatI WGTACW 4 cut(s) 1697, 2059, 2275, 2496
TscAI CASTG 5 cut(s) 621, 1450, 1912, 2033, 2989
TseFI GTSAC 1 cut(s) 3027
TseI GCWGC 5 cut(s) 112, 370, 1198, 1270, 1583
Tsp45I GTSAC 1 cut(s) 3027
TspGWI ACGGA 3 cut(s) 1161, 1233, 2922
TspRI CASTG 5 cut(s) 621, 1450, 1912, 2033, 2989
Vha464I CTTAAG 1 cut(s) 2008
VpaK11BI GGWCC 6 cut(s) 918, 1449, 1645, 1748, 1805, 3122
VspI ATTAAT 2 cut(s) 1524, 2457
XapI RAATTY 6 cut(s) 319, 508, 766, 893, 1319, 2297
XbaI TCTAGA 1 cut(s) 2134
XceI RCATGY 1 cut(s) 3140
XmiI GTMKAC 2 cut(s) 473, 2125
XmnI GAANNNNTTC 3 cut(s) 824, 1047, 1085
XspI CTAG 1 cut(s) 2135
ZrmI AGTACT 2 cut(s) 1699, 2061
Zsp2I ATGCAT 1 cut(s) 910
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.