RLG00000028279

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
20965237 .. 20967843
2607 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028279

Sequence Viewer

Length: 1701 bp
ATGTCCTATTGTGATCTTTCAGGCCCTCTTCACGAGTCCCTTGCTAAGCTTCAGTCTCTATCTGTAATTAGGTTGAAATGGAACGATATCTCTGCGCCAGTTCCAGAATTCTTTGCCAACTTTTCAAACTTAACTGTCTTGAATCTCCAAAGCTGCTCATTGCATGGAACATTTCCCAAAGAGATCTTTCAGTTACCTTCTCTACAAAGTATTGACCTTTCAGCTAATGACCAACTTGATGATTCTCTAGGAGTTCATTCAATCAATCGCACTAATCTGGAGTACCTTGACCTTCATTCCAACCAGTTTCATGGGCAAGTCCCAATTTTGAGAAATGTCGATTATCTAGATTTCTCAAGGAATTATTACAGCTCTATCATACCGAATACCTATGGAGATGTATTTTCTAACATTGGACTCTTGTTGCTTTCGAGCAATAACCTCAAAGGGATCATACCAGAGTCATTATGCAATTCACAAAGTCTCTTTCTTGATCTATCCAATAATTCTTTGAGTGGCACGGTTCCCCGGTGCTTGGTTACAATGGGCACAGGACTGAATTTAAGGAGGAACAATCTTACATACGTAGATGAATTCTCTGATAATTGCAGTTTAAAAACGCTAGACATCAGTGGAAATCAGATTCGAGGCCAGTTTCTAAAATCTCTTGTCAACTGCACCCAGTTAGAGGTTTTAAACACTGGAAACAATCTGATAACAGAACCATTTCCATGCTTTTTGAGGAATATATCCACCTTGCAAGTTCTTGTCTTGCGATCCAATAAATTTTATGGGCGCATTGGATGTCACAGGACAAATGGCACTTGGCCTGTACTTCAGATCATAGATCTAGCTCACAACACTTTTAGTGGTGAAGTACCTGGAAAAGCTTTGACAACTTGGCAGGCCATGAGGACTGGCCAAGAATCCCAAGATGATGCCCCATCGGCCATGACGACTCGCGAAGATGATGCCCCATCGAAGATCAGTAACCTTCAATTCGGGACGCCTAATGGCGCTTTTTATCAAGTAGATACAATCACGGTTACTAACAAAGGTCATGAGATGGAGCTGGTGACTGTTTTAACTATCTTCACCTCCATTGACTTCTCCTGCAACAAGTTCAACGGATCAATACCGGAGGAAATTGGAGAACTCAAATTATTGTATGCCCTCAACTTGTCCAACAATGCTTTCACAGGTTCAGTTCCATCATCACTAAGTAACTTGAGTCAGCTAGAGTCTCTGGACCTCTCGAAAAACAAACTGAGCTGTCAAATCCCACCGGAGCTTACAAAACTCACTTTCCTTGCATTCTTGAATCTCTCATATAATCAATTGGTCGGGAGGATACCAAGTGCTGCTCAATTTTCAACGTTTGATGCAGCTTCCTTCGAAGGTAACAAAGGATTATGGGGGCCTCCTTTAACAGCAAACAATAGAACAGTGTTCTCGCCAAAGATGGAAGGAAACCATTCAAATTTGGGACATGAGATTGATTGGGATATTATCTGTCCTGAAATTGGATTTACATGTGGGTTTGGGATTGCAATCGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTATTACAGAGCTATGTATAACATGCTTCTAAAGATATTCCCTCAGCTGGAACAGAGATTTGGTCATCACAGGAGACATGTTTACGTACGTCAAAGATACTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

567

Amino Acids

63.54

Weight (kDa)

6.67

Isoelectric Point (pI)

42.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 19 - 77 7.4e-07 Leucine rich repeat
LRR_14 PF23598 378 - 442 3.4e-06 Leucine-rich repeat region
LRR_8 PF13855 389 - 447 4.1e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 963
AclI AACGTT 1 cut(s) 1376
AclWI GGATC 3 cut(s) 458, 771, 1138
AcoI YGGCCR 2 cut(s) 919, 948
AcsI RAATTY 5 cut(s) 107, 559, 593, 785, 1480
AcuI CTGAAG 2 cut(s) 35, 821
AcyI GRCGYC 1 cut(s) 1007
AfaI GTAC 4 cut(s) 284, 834, 879, 1677
AfiI CCNNNNNNNGG 4 cut(s) 535, 688, 1523, 1636
AflIII ACRYGT 2 cut(s) 1532, 1666
AgsI TTSAA 9 cut(s) 76, 126, 142, 261, 998, 1126, 1321, 1374, 1479
AjnI CCWGG 1 cut(s) 880
AjuI GAANNNNNNNTTGG 4 cut(s) 1178, 1210, 1632, 1664
Alw26I GTCTC 5 cut(s) 60, 488, 1248, 1657, 1687
AlwI GGATC 3 cut(s) 458, 771, 1138
AoxI GGCC 7 cut(s) 22, 649, 827, 906, 919, 948, 1418
ApeKI GCWGC 3 cut(s) 153, 1361, 1385
ApoI RAATTY 5 cut(s) 107, 559, 593, 785, 1480
Asp700I GAANNNNTTC 2 cut(s) 726, 1474
AspLEI GCGC 3 cut(s) 97, 798, 1019
AspS9I GGNCC 3 cut(s) 23, 1249, 1418
AsuC2I CCSGG 1 cut(s) 529
AsuHPI GGTGA 3 cut(s) 884, 1087, 1087
AsuII TTCGAA 1 cut(s) 1395
AvaII GGWCC 1 cut(s) 1249
BaeGI GKGCMC 1 cut(s) 551
BalI TGGCCA 1 cut(s) 921
BauI CACGAG 1 cut(s) 32
BbvCI CCTCAGC 1 cut(s) 1632
BbvI GCAGC 3 cut(s) 140, 1348, 1397
BccI CCATC 6 cut(s) 952, 985, 1060, 1219, 1456, 1572
BcgI CGANNNNNNTGC 6 cut(s) 23, 57, 74, 108, 953, 987
BciT130I CCWGG 1 cut(s) 882
BciVI GTATCC 1 cut(s) 1344
BcnI CCSGG 1 cut(s) 529
BcoDI GTCTC 5 cut(s) 60, 488, 1248, 1657, 1687
BfaI CTAG 5 cut(s) 248, 347, 623, 851, 1238
BfoI RGCGCY 1 cut(s) 1020
BfuI GTATCC 1 cut(s) 1344
BglI GCCNNNNNGGC 1 cut(s) 947
BglII AGATCT 2 cut(s) 183, 847
BisI GCNGC 3 cut(s) 154, 1362, 1386
BlpI GCTNAGC 1 cut(s) 45
BlsI GCNGC 3 cut(s) 155, 1363, 1387
Bme1390I CCNGG 2 cut(s) 529, 882
Bme18I GGWCC 1 cut(s) 1249
BmgT120I GGNCC 3 cut(s) 23, 1249, 1418
BmiI GGNNCC 2 cut(s) 525, 1419
BmrFI CCNGG 2 cut(s) 529, 882
BmrI ACTGGG 1 cut(s) 676
BmsI GCATC 3 cut(s) 928, 961, 1372
BmuI ACTGGG 1 cut(s) 676
BpmI CTGGAG 1 cut(s) 299
Bpu10I CCTNAGC 1 cut(s) 1632
Bpu1102I GCTNAGC 1 cut(s) 45
Bpu14I TTCGAA 1 cut(s) 1395
BpuEI CTTGAG 2 cut(s) 340, 1249
BpuMI CCSGG 1 cut(s) 529
BsaAI YACGTR 2 cut(s) 586, 1675
BsaBI GATNNNNATC 1 cut(s) 1550
BsaHI GRCGYC 1 cut(s) 1007
BsaJI CCNNGG 1 cut(s) 527
BsaWI WCCGGW 2 cut(s) 1138, 1285
Bsc4I CCNNNNNNNGG 4 cut(s) 535, 688, 1523, 1636
Bse1I ACTGG 7 cut(s) 98, 304, 652, 682, 706, 922, 1694
Bse3DI GCAATG 1 cut(s) 158
Bse8I GATNNNNATC 1 cut(s) 1550
BseBI CCWGG 1 cut(s) 882
BseDI CCNNGG 1 cut(s) 527
BseGI GGATG 1 cut(s) 809
BseJI GATNNNNATC 1 cut(s) 1550
BseLI CCNNNNNNNGG 4 cut(s) 535, 688, 1523, 1636
BseMI GCAATG 1 cut(s) 158
BseMII CTCAG 2 cut(s) 1259, 1646
BseNI ACTGG 7 cut(s) 98, 304, 652, 682, 706, 922, 1694
BseSI GKGCMC 1 cut(s) 551
BseXI GCAGC 3 cut(s) 140, 1348, 1397
BsgI GTGCAG 1 cut(s) 661
Bsh1236I CGCG 1 cut(s) 963
BshFI GGCC 7 cut(s) 24, 651, 829, 908, 921, 950, 1420
BsiSI CCGG 3 cut(s) 529, 1139, 1286
BsiWI CGTACG 1 cut(s) 1675
BslFI GGGAC 4 cut(s) 22, 305, 1018, 1500
BslI CCNNNNNNNGG 4 cut(s) 535, 688, 1523, 1636
BsmAI GTCTC 5 cut(s) 60, 488, 1248, 1657, 1687
BsmBI CGTCTC 1 cut(s) 1687
BsmFI GGGAC 4 cut(s) 22, 305, 1018, 1500
BsmI GAATGC 1 cut(s) 1313
BsnI GGCC 7 cut(s) 24, 651, 829, 908, 921, 950, 1420
Bsp119I TTCGAA 1 cut(s) 1395
Bsp1286I GDGCHC 1 cut(s) 551
Bsp143I GATC 9 cut(s) 13, 183, 450, 493, 776, 840, 847, 984, 1130
Bsp1720I GCTNAGC 1 cut(s) 45
Bsp68I TCGCGA 1 cut(s) 963
BspANI GGCC 7 cut(s) 24, 651, 829, 908, 921, 950, 1420
BspCNI CTCAG 2 cut(s) 1260, 1645
BspFNI CGCG 1 cut(s) 963
BspHI TCATGA 1 cut(s) 1060
BspLI GGNNCC 2 cut(s) 525, 1419
BspPI GGATC 3 cut(s) 458, 771, 1138
BspT104I TTCGAA 1 cut(s) 1395
BsrDI GCAATG 1 cut(s) 158
BsrI ACTGG 7 cut(s) 98, 304, 652, 682, 706, 922, 1694
BssECI CCNNGG 1 cut(s) 527
BssMI GATC 9 cut(s) 13, 183, 450, 493, 776, 840, 847, 984, 1130
BssNI GRCGYC 1 cut(s) 1007
BssSI CACGAG 1 cut(s) 32
Bst2BI CACGAG 1 cut(s) 32
Bst2UI CCWGG 1 cut(s) 882
Bst4CI ACNGT 5 cut(s) 136, 523, 1045, 1081, 1447
Bst6I CTCTTC 1 cut(s) 33
BstACI GRCGYC 1 cut(s) 1007
BstBAI YACGTR 2 cut(s) 586, 1675
BstBI TTCGAA 1 cut(s) 1395
BstC8I GCNNGC 1 cut(s) 906
BstDEI CTNAG 4 cut(s) 45, 1220, 1268, 1632
BstF5I GGATG 1 cut(s) 809
BstFNI CGCG 1 cut(s) 963
BstH2I RGCGCY 1 cut(s) 1020
BstHHI GCGC 3 cut(s) 97, 798, 1019
BstKTI GATC 9 cut(s) 16, 186, 453, 496, 779, 843, 850, 987, 1133
BstMAI GTCTC 5 cut(s) 60, 488, 1248, 1657, 1687
BstMBI GATC 9 cut(s) 13, 183, 450, 493, 776, 840, 847, 984, 1130
BstMWI GCNNNNNNNGC 1 cut(s) 947
BstNI CCWGG 1 cut(s) 882
BstNSI RCATGY 3 cut(s) 1536, 1615, 1670
BstSCI CCNGG 2 cut(s) 527, 880
BstSLI GKGCMC 1 cut(s) 551
BstSNI TACGTA 2 cut(s) 586, 1675
BstUI CGCG 1 cut(s) 963
BstV1I GCAGC 3 cut(s) 140, 1348, 1397
BstX2I RGATCY 2 cut(s) 183, 847
BstXI CCANNNNNNTGG 1 cut(s) 311
BstYI RGATCY 2 cut(s) 183, 847
BsuI GTATCC 1 cut(s) 1344
BsuRI GGCC 7 cut(s) 24, 651, 829, 908, 921, 950, 1420
BtsCI GGATG 1 cut(s) 809
BtsIMutI CAGTG 3 cut(s) 637, 699, 1452
BtuMI TCGCGA 1 cut(s) 963
Cac8I GCNNGC 1 cut(s) 906
CciI TCATGA 1 cut(s) 1060
CfoI GCGC 3 cut(s) 97, 798, 1019
Cfr13I GGNCC 3 cut(s) 23, 1249, 1418
CseI GACGC 1 cut(s) 1015
Csp6I GTAC 4 cut(s) 283, 833, 878, 1676
CviQI GTAC 4 cut(s) 283, 833, 878, 1676
DdeI CTNAG 4 cut(s) 45, 1220, 1268, 1632
DpnI GATC 9 cut(s) 15, 185, 452, 495, 778, 842, 849, 986, 1132
DpnII GATC 9 cut(s) 13, 183, 450, 493, 776, 840, 847, 984, 1130
DraI TTTAAA 2 cut(s) 615, 696
EaeI YGGCCR 2 cut(s) 919, 948
Eam1104I CTCTTC 1 cut(s) 33
EarI CTCTTC 1 cut(s) 33
Eco105I TACGTA 2 cut(s) 586, 1675
Eco32I GATATC 1 cut(s) 88
Eco47I GGWCC 1 cut(s) 1249
Eco57I CTGAAG 2 cut(s) 35, 821
EcoO109I RGGNCCY 2 cut(s) 23, 1418
EcoRI GAATTC 2 cut(s) 107, 593
EcoRII CCWGG 1 cut(s) 880
EcoRV GATATC 1 cut(s) 88
Esp3I CGTCTC 1 cut(s) 1687
FaqI GGGAC 4 cut(s) 22, 305, 1018, 1500
Fnu4HI GCNGC 3 cut(s) 154, 1362, 1386
FokI GGATG 1 cut(s) 816
Fsp4HI GCNGC 3 cut(s) 154, 1362, 1386
FspBI CTAG 5 cut(s) 248, 347, 623, 851, 1238
GlaI GCGC 3 cut(s) 96, 797, 1018
GluI GCNGC 3 cut(s) 154, 1362, 1386
GsuI CTGGAG 1 cut(s) 299
HaeII RGCGCY 1 cut(s) 1020
HaeIII GGCC 7 cut(s) 24, 651, 829, 908, 921, 950, 1420
HapII CCGG 3 cut(s) 529, 1139, 1286
HgaI GACGC 1 cut(s) 1015
HhaI GCGC 3 cut(s) 97, 798, 1019
Hin1I GRCGYC 1 cut(s) 1007
Hin6I GCGC 3 cut(s) 95, 796, 1017
HinP1I GCGC 3 cut(s) 95, 796, 1017
HincII GTYRAC 1 cut(s) 673
HindII GTYRAC 1 cut(s) 673
HindIII AAGCTT 2 cut(s) 47, 888
HpaII CCGG 3 cut(s) 529, 1139, 1286
HphI GGTGA 3 cut(s) 884, 1087, 1087
Hpy166II GTNNAC 2 cut(s) 673, 1672
Hpy188I TCNGA 4 cut(s) 601, 642, 714, 840
Hpy8I GTNNAC 2 cut(s) 673, 1672
HpyAV CCTTC 6 cut(s) 207, 302, 1004, 1391, 1402, 1460
HpyCH4III ACNGT 5 cut(s) 136, 523, 1045, 1081, 1447
HpyCH4IV ACGT 5 cut(s) 585, 1376, 1674, 1678, 1696
HpyF10VI GCNNNNNNNGC 1 cut(s) 947
HpyF3I CTNAG 4 cut(s) 45, 1220, 1268, 1632
HpySE526I ACGT 5 cut(s) 585, 1376, 1674, 1678, 1696
Hsp92I GRCGYC 1 cut(s) 1007
HspAI GCGC 3 cut(s) 95, 796, 1017
Kzo9I GATC 9 cut(s) 13, 183, 450, 493, 776, 840, 847, 984, 1130
LmnI GCTCC 2 cut(s) 1069, 1288
Lsp1109I GCAGC 3 cut(s) 140, 1348, 1397
LweI GCATC 3 cut(s) 928, 961, 1372
MaeI CTAG 5 cut(s) 248, 347, 623, 851, 1238
MaeII ACGT 5 cut(s) 585, 1376, 1674, 1678, 1696
MaeIII GTNAC 9 cut(s) 192, 538, 806, 989, 1045, 1075, 1223, 1400, 1557
MalI GATC 9 cut(s) 15, 185, 452, 495, 778, 842, 849, 986, 1132
MboI GATC 9 cut(s) 13, 183, 450, 493, 776, 840, 847, 984, 1130
MboII GAAGA 4 cut(s) 20, 977, 994, 1084
MfeI CAATTG 1 cut(s) 1337
MflI RGATCY 2 cut(s) 183, 847
MhlI GDGCHC 1 cut(s) 551
MlsI TGGCCA 1 cut(s) 921
MluNI TGGCCA 1 cut(s) 921
MlyI GAGTC 6 cut(s) 44, 411, 470, 952, 1240, 1250
MmeI TCCRAC 2 cut(s) 324, 1209
Mox20I TGGCCA 1 cut(s) 921
MroXI GAANNNNTTC 2 cut(s) 726, 1474
MscI TGGCCA 1 cut(s) 921
MseI TTAA 6 cut(s) 131, 563, 614, 695, 1085, 1427
MslI CAYNNNNRTG 1 cut(s) 730
Msp20I TGGCCA 1 cut(s) 921
MspA1I CMGCKG 1 cut(s) 1636
MspI CCGG 3 cut(s) 529, 1139, 1286
MspR9I CCNGG 2 cut(s) 529, 882
MunI CAATTG 1 cut(s) 1337
Mva1269I GAATGC 1 cut(s) 1313
MvaI CCWGG 1 cut(s) 882
MvnI CGCG 1 cut(s) 963
MwoI GCNNNNNNNGC 1 cut(s) 947
NciI CCSGG 1 cut(s) 529
NdeII GATC 9 cut(s) 13, 183, 450, 493, 776, 840, 847, 984, 1130
NlaIV GGNNCC 2 cut(s) 525, 1419
NmuCI GTSAC 3 cut(s) 806, 1075, 1557
NruI TCGCGA 1 cut(s) 963
NspI RCATGY 3 cut(s) 1536, 1615, 1670
NspV TTCGAA 1 cut(s) 1395
PagI TCATGA 1 cut(s) 1060
PciI ACATGT 2 cut(s) 1532, 1666
PcsI WCGNNNNNNNCGW 1 cut(s) 953
PctI GAATGC 1 cut(s) 1313
PdmI GAANNNNTTC 2 cut(s) 726, 1474
PfeI GAWTC 5 cut(s) 142, 242, 643, 926, 1321
Pfl23II CGTACG 1 cut(s) 1675
PkrI GCNGC 3 cut(s) 155, 1363, 1387
PleI GAGTC 6 cut(s) 43, 411, 469, 952, 1239, 1249
PpsI GAGTC 6 cut(s) 43, 411, 469, 952, 1239, 1249
Ppu21I YACGTR 2 cut(s) 586, 1675
PscI ACATGT 2 cut(s) 1532, 1666
Psp1406I AACGTT 1 cut(s) 1376
Psp6I CCWGG 1 cut(s) 880
PspGI CCWGG 1 cut(s) 880
PspLI CGTACG 1 cut(s) 1675
PspN4I GGNNCC 2 cut(s) 525, 1419
PspPI GGNCC 3 cut(s) 23, 1249, 1418
PsuI RGATCY 2 cut(s) 183, 847
PvuII CAGCTG 1 cut(s) 1636
RruI TCGCGA 1 cut(s) 963
RsaI GTAC 4 cut(s) 284, 834, 879, 1677
RsaNI GTAC 4 cut(s) 283, 833, 878, 1676
RseI CAYNNNNRTG 1 cut(s) 730
SaqAI TTAA 6 cut(s) 131, 563, 614, 695, 1085, 1427
SatI GCNGC 3 cut(s) 154, 1362, 1386
Sau3AI GATC 9 cut(s) 13, 183, 450, 493, 776, 840, 847, 984, 1130
Sau96I GGNCC 3 cut(s) 23, 1249, 1418
SchI GAGTC 6 cut(s) 44, 411, 470, 952, 1240, 1250
ScrFI CCNGG 2 cut(s) 529, 882
SduI GDGCHC 1 cut(s) 551
SfaNI GCATC 3 cut(s) 928, 961, 1372
SfuI TTCGAA 1 cut(s) 1395
SinI GGWCC 1 cut(s) 1249
SmiMI CAYNNNNRTG 1 cut(s) 730
SmlI CTYRAG 2 cut(s) 355, 1228
SmoI CTYRAG 2 cut(s) 355, 1228
SnaBI TACGTA 2 cut(s) 586, 1675
SspMI CTAG 5 cut(s) 248, 347, 623, 851, 1238
StyD4I CCNGG 2 cut(s) 527, 880
TaaI ACNGT 5 cut(s) 136, 523, 1045, 1081, 1447
TaiI ACGT 5 cut(s) 588, 1379, 1677, 1681, 1699
TaqI TCGA 6 cut(s) 339, 431, 646, 980, 1256, 1395
TatI WGTACW 1 cut(s) 832
TfiI GAWTC 5 cut(s) 142, 242, 643, 926, 1321
Tru1I TTAA 6 cut(s) 131, 563, 614, 695, 1085, 1427
Tru9I TTAA 6 cut(s) 131, 563, 614, 695, 1085, 1427
TscAI CASTG 3 cut(s) 637, 706, 1452
TseFI GTSAC 3 cut(s) 806, 1075, 1557
TseI GCWGC 3 cut(s) 153, 1361, 1385
Tsp45I GTSAC 3 cut(s) 806, 1075, 1557
TspDTI ATGAA 4 cut(s) 245, 284, 299, 606
TspGWI ACGGA 1 cut(s) 1143
TspRI CASTG 3 cut(s) 637, 706, 1452
VpaK11BI GGWCC 1 cut(s) 1249
XapI RAATTY 5 cut(s) 107, 559, 593, 785, 1480
XbaI TCTAGA 1 cut(s) 346
XceI RCATGY 3 cut(s) 1536, 1615, 1670
XmnI GAANNNNTTC 2 cut(s) 726, 1474
XspI CTAG 5 cut(s) 248, 347, 623, 851, 1238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.