Rw4G015840

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000047
Physical Location & Seq
Reverse (-)
36294863 .. 36302361
7499 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G015840.1

Sequence Viewer

Length: 3105 bp
ATGAAAAATATGCTCAGCTTTCTGCTATTGGTATTTGCTATCTCCATTACATGCTCCCCTGCAATTGGCAGCAAATGTATCGGAGACCAGCAGGTATCATTGCTCAACATCAAGAAAAGCCTTGTATTCAATGCTTCACGTTCATCGAAGCTTGTTTCGTGGGATTCAAGTACAGATTGTTGTTCTTGGCTCGGCATTACATGCAGCAATGATGGGCGTGTTTTCGGTGTTGACATCAGCGGAGAATCTATCTCAGGTGGAATTGACAATTCCAGCCTGCGTCTATTCCATCTTCAACACCTTCAAAGCCTCAACTTGGCTGACAACGAAATTGGTAACGTTGGCTCTCAAGTACTTCCATCAGCCATTGGACAGCTTAAGAATTTGAGGTATCTCAACTTATCTGACAATTTTTATTCAGGGCAAGTTCCCATTGAGATTTCATACTTGACCAGGTTGGTGATTCTTGATATTTCTTACAACTTGTTAAAACTTGAGAGCCCAAATTTACACATGCTGGTTCGAAATCTCACAGAGCTCACAGAGTTATATCTTAATGATGTCCAAATATCAGCCGAAGGGAGTGATTGGGGCCAGGCCATATCATCTTCTCTTCCAAATTTGAGGGTGTTAGACTTGTCCAGTTGTGGTCTTTCAGGCCCTATCCACGAGTCCCTTGCTAAGCTTCAGTCTCTATCAGTGGTTCAATTGCAAGAGAATAACATCTCTGCACCAATTCCAGGATTCTTCGCCAACTTTTCAAATTTGACTCTGTTGGATCTCTACCAAAGCAATTTGCAGGGAATATTTCCCAAAGAGATCTTTCAATTACCTACACTGCAACGCATCGACCTTTCATGGAATCCAGAACTCCATGGTTCCTTGCCAGAATTTCCAAAAAATGGATCTCTCCGGTCCTTGTTTCTTCGTGGATCGAAATTTTCAGGGTCATTACCAAACTCGATTGGCAACCTCGCAATGTTGTCCATGCTAGATGTTTCAAGCTGCAGTTTCACCGGACCATTACCCAAGTCGATGGCAAACCTTACGAAATTGGTTGATCTGAACATGCAAAAAAATAACTTTGAAGGTTCAATTCCATCTTTCAGTAGGGCCAAGAATCTGGAGAGCGTAGACCTTTCTTCCAATGGTCTAACTGGTAATATCAATTGCACCACTTGGGGAAACCTTTCTAACTTATTCTTTCTCAGCTTCCGTGACAATATGCTCGACGGTAATATCCCATCCTCTTTATTTTCTCTCACCTTGCTAAATTCTTTGGATCTTTCCAACAATCAATTCTCAGGTCAATTCCCTGAACTTTCTAATGACTCTTCCTACTCCATACAATTTCTTAATTTGAGAAGCAACAATCTGGAAGGTCCAATACCCATGTCCGTCTTTAATTTTCAAGGGCTTGAGGTTCTTTATCTTTCTTCAAATAAATTCAGTGACTCATTTCCCCTTGATGGTTTTCAACATCAAAAAAACCTCGAGGTAATTGATCTTTCGTACAACAACATTTTTCTTAGCTACGATGCTAGAAATTTCTCATATCCATCCTACCCTCAACTCTTGAGTTTGAGGTTAGCTTCAGGAAATTTGAGAACATTCCCTGGTTTCTTGAGAAATCAGTCCCAACTACTCACCTTGGACCTTTCAGATAACCAGATACATGGCGAGGTACCTAATTGGATATGGAAGCTCAAACGTCTTTATTCATTAAATCTTTCATGCAACTCCCTAGATACTTTAAAAGCTTCTTCATTATCCAATCTCACTTCCCTGGAATTGGTCGACCTTCATTCCAACAAATTTCAAGGAGAAATCCCAATTGTCTCATCACCAAAAGCGTTTTATCTGGATTACTCGAGGAATGGTTTCAACTCCAACATACCAACTACCATTGGAGATAAGCTTGTTAAAACTGCTTTCATTTCTTTTTCGAGCAATAACCTCCATGGGGTCATTCCAAGATCAATATGCAAATCACATCGTCTTGAGGTTCTTGATCTGTCTAATAATTCTCTAAGTGGTATGGTTCCTCAGTGTTTGACTGAAATGACCACTCTTGCAGTACTTAATTTGAGGAGAAACAATCTTACAAAGGTTGACATGTTTTCCAAGAATTGCAGTTTAGAAACTTTTGATATCAGTGAAAATCATATAGAAGGCCAGTTTCTAAAATCTCTTGTTAACTGCACAAAGTTGAAGGTTTTAAACCTTGGAAACAATCAGATAACATATCCTTTTCCATGCTTTTTGAAGAACATGTCCACTTTACGTGTCCTTATCTTGCGTTCAAATGAGTTTTATGGACACATTGGATGTCCAGAGACTAATGGAACCTGGCCAGTGCTTCAAATCATTGACCTAGCCGACAACAATTTCAATGGTGAAATACCTGCAAAAGCTTTGATAACATGGCAGGCCATGATGGCTAAACAAGATGATGCCCCATCAAAGCTCAATCACCTTAAATTTCAAGATGATCAGCATGATTGGATTTTTTACCAGGATACAATTACGGTTATCAACAAAGGTATAGAGATAGAGCTGGTAAAGATTCTAACTGTCTTTACCTCGATTGACTTCTCATGCAACAAGTTCAACGGATCAATACCAAAGGAAATTGGAGAATTCAAATTGTTGTATGCCCTCAACTTGTCAAATAATGCTTTCATAGGAGCAATTCCAGCATCCTTAAGGAGCTTGAGTCAACTAGAGTCGCTAGACCTCTCAAAGAACAACTTGAGCGGACAAATTCCACCACAGCTTACACAGCTCACTTTCCTTTCGTTTTTGAATCTCTCATATAATCAACTTGTGGGAAGGATTCCAAGCAGTAACCAATTTTCAACATTTTCAGAAGATTCATTTGAAGGTAATAAAGATTTATTCGGGCCTCCTTTAACCAAAGATGACACATCAAGAGATCATGTTGATTGGGATCTTATCAGTGTTGAAATTGGATTTATATTTGGGTTTGGAATTGTCATTGGGTCACCTTTGTTTTGCAAGAGATGGAGAAAATGGTACTGCAGAGCTATTTGTAACATCCTTATAAAGATATTCCCTCAACTGGAAGAAAGAATCTCTACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1034

Amino Acids

115.26

Weight (kDa)

5.77

Isoelectric Point (pI)

42.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 69 4e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 95 - 188 2.1e-06 Leucine-rich repeat region
LRR_8 PF13855 231 - 289 3.7e-09 Leucine rich repeat
LRR_14 PF23598 303 - 361 7.5e-07 Leucine-rich repeat region
LRR_8 PF13855 452 - 508 4.9e-06 Leucine rich repeat
LRR_8 PF13855 649 - 701 9.9e-07 Leucine rich repeat
LRR_8 PF13855 690 - 747 6.6e-06 Leucine rich repeat
LRR_8 PF13855 884 - 942 4.3e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3065
AbsI CCTCGAGG 1 cut(s) 1493
Acc36I ACCTGC 2 cut(s) 82, 2413
Acc65I GGTACC 1 cut(s) 1684
AccB1I GGYRCC 1 cut(s) 1684
AccB7I CCANNNNNTGG 1 cut(s) 902
AccBSI CCGCTC 1 cut(s) 2757
AccI GTMKAC 2 cut(s) 1134, 1797
AciI CCGC 2 cut(s) 240, 2757
AclI AACGTT 1 cut(s) 339
AclWI GGATC 6 cut(s) 786, 913, 940, 1290, 2623, 2958
AcoI YGGCCR 1 cut(s) 2351
AcuI CTGAAG 2 cut(s) 671, 1578
AfaI GTAC 6 cut(s) 172, 354, 1514, 1686, 2079, 3038
AfiI CCNNNNNNNGG 8 cut(s) 65, 316, 740, 902, 1469, 1792, 1963, 3082
AflII CTTAAG 2 cut(s) 377, 2704
AflIII ACRYGT 3 cut(s) 2115, 2271, 2284
AjnI CCWGG 7 cut(s) 452, 594, 739, 1615, 1785, 2348, 2514
AjuI GAANNNNNNNTTGG 2 cut(s) 1283, 1315
Alw21I GWGCWC 1 cut(s) 540
Alw26I GTCTC 4 cut(s) 78, 696, 1843, 2330
AlwI GGATC 6 cut(s) 786, 913, 940, 1290, 2623, 2958
Ama87I CYCGRG 2 cut(s) 1493, 1870
AoxI GGCC 8 cut(s) 592, 597, 658, 1113, 2173, 2351, 2430, 2903
ApeKI GCWGC 3 cut(s) 69, 204, 1005
Asp700I GAANNNNTTC 2 cut(s) 1189, 1880
Asp718I GGTACC 1 cut(s) 1684
AspS9I GGNCC 8 cut(s) 592, 659, 915, 1019, 1113, 1382, 1654, 2903
AsuHPI GGTGA 8 cut(s) 472, 1006, 1255, 1639, 1836, 2408, 2465, 2997
AsuII TTCGAA 1 cut(s) 523
AvaI CYCGRG 2 cut(s) 1493, 1870
AvaII GGWCC 4 cut(s) 915, 1019, 1382, 1654
BalI TGGCCA 1 cut(s) 2353
BanI GGYRCC 1 cut(s) 1684
BanII GRGCYC 2 cut(s) 503, 540
BarI GAAGNNNNNNTAC 2 cut(s) 1371, 1403
BauI CACGAG 1 cut(s) 668
Bbv12I GWGCWC 1 cut(s) 540
BbvI GCAGC 3 cut(s) 81, 216, 992
BcgI CGANNNNNNTGC 4 cut(s) 61, 95, 659, 693
BciT130I CCWGG 7 cut(s) 454, 596, 741, 1617, 1787, 2350, 2516
BciVI GTATCC 1 cut(s) 2512
BclI TGATCA 1 cut(s) 2491
BcoDI GTCTC 4 cut(s) 78, 696, 1843, 2330
BfaI CTAG 6 cut(s) 992, 1542, 1745, 2375, 2723, 2732
BfmI CTRYAG 2 cut(s) 1006, 3040
BfrI CTTAAG 2 cut(s) 377, 2704
BfuAI ACCTGC 2 cut(s) 82, 2413
BfuI GTATCC 1 cut(s) 2512
BglI GCCNNNNNGGC 1 cut(s) 2438
BglII AGATCT 1 cut(s) 819
BisI GCNGC 3 cut(s) 70, 205, 1006
BlpI GCTNAGC 2 cut(s) 14, 681
BlsI GCNGC 3 cut(s) 71, 206, 1007
BmcAI AGTACT 2 cut(s) 354, 2079
Bme1390I CCNGG 7 cut(s) 454, 596, 741, 1617, 1787, 2350, 2516
Bme18I GGWCC 4 cut(s) 915, 1019, 1382, 1654
BmeT110I CYCGRG 2 cut(s) 1493, 1870
BmgT120I GGNCC 8 cut(s) 592, 659, 915, 1019, 1113, 1382, 1654, 2903
BmiI GGNNCC 5 cut(s) 593, 880, 1686, 2043, 2347
BmrFI CCNGG 7 cut(s) 454, 596, 741, 1617, 1787, 2350, 2516
BmsI GCATC 4 cut(s) 855, 1528, 2443, 2708
BpmI CTGGAG 1 cut(s) 1145
Bpu1102I GCTNAGC 2 cut(s) 14, 681
Bpu14I TTCGAA 1 cut(s) 523
BpuEI CTTGAG 8 cut(s) 333, 515, 1439, 1597, 1645, 2021, 2734, 2773
BsaAI YACGTR 1 cut(s) 2285
BsaBI GATNNNNATC 1 cut(s) 2949
BsaI GGTCTC 1 cut(s) 78
BsaJI CCNNGG 6 cut(s) 874, 1615, 1650, 1785, 1960, 2224
BsaWI WCCGGW 2 cut(s) 912, 1016
BsaXI ACNNNNNCTCC 2 cut(s) 2701, 2731
Bsc4I CCNNNNNNNGG 8 cut(s) 65, 316, 740, 902, 1469, 1792, 1963, 3082
Bse1I ACTGG 5 cut(s) 642, 1162, 2176, 2354, 3087
Bse3DI GCAATG 3 cut(s) 98, 214, 984
Bse8I GATNNNNATC 1 cut(s) 2949
BseBI CCWGG 7 cut(s) 454, 596, 741, 1617, 1787, 2350, 2516
BseDI CCNNGG 6 cut(s) 874, 1615, 1650, 1785, 1960, 2224
BseGI GGATG 5 cut(s) 1244, 1559, 2333, 2699, 3057
BseJI GATNNNNATC 1 cut(s) 2949
BseLI CCNNNNNNNGG 8 cut(s) 65, 316, 740, 902, 1469, 1792, 1963, 3082
BseMI GCAATG 3 cut(s) 98, 214, 984
BseMII CTCAG 5 cut(s) 28, 267, 1222, 1317, 2060
BseNI ACTGG 5 cut(s) 642, 1162, 2176, 2354, 3087
BseRI GAGGAG 1 cut(s) 2104
BseXI GCAGC 3 cut(s) 81, 216, 992
BsgI GTGCAG 2 cut(s) 714, 2185
BshFI GGCC 8 cut(s) 594, 599, 660, 1115, 2175, 2353, 2432, 2905
BshNI GGYRCC 1 cut(s) 1684
BsiHKAI GWGCWC 1 cut(s) 540
BsiHKCI CYCGRG 2 cut(s) 1493, 1870
BsiSI CCGG 2 cut(s) 913, 1017
BslFI GGGAC 2 cut(s) 658, 1621
BslI CCNNNNNNNGG 8 cut(s) 65, 316, 740, 902, 1469, 1792, 1963, 3082
BsmAI GTCTC 4 cut(s) 78, 696, 1843, 2330
BsmFI GGGAC 2 cut(s) 658, 1621
BsnI GGCC 8 cut(s) 594, 599, 660, 1115, 2175, 2353, 2432, 2905
Bso31I GGTCTC 1 cut(s) 78
BsoBI CYCGRG 2 cut(s) 1493, 1870
Bsp119I TTCGAA 1 cut(s) 523
Bsp1286I GDGCHC 2 cut(s) 503, 540
Bsp1720I GCTNAGC 2 cut(s) 14, 681
Bsp19I CCATGG 2 cut(s) 874, 1960
BspACI CCGC 2 cut(s) 240, 2757
BspANI GGCC 8 cut(s) 594, 599, 660, 1115, 2175, 2353, 2432, 2905
BspCNI CTCAG 5 cut(s) 27, 266, 1221, 1316, 2059
BspLI GGNNCC 5 cut(s) 593, 880, 1686, 2043, 2347
BspMAI CTGCAG 2 cut(s) 1010, 3044
BspMI ACCTGC 2 cut(s) 82, 2413
BspPI GGATC 6 cut(s) 786, 913, 940, 1290, 2623, 2958
BspT104I TTCGAA 1 cut(s) 523
BspT107I GGYRCC 1 cut(s) 1684
BspTI CTTAAG 2 cut(s) 377, 2704
BspTNI GGTCTC 1 cut(s) 78
BsrBI CCGCTC 1 cut(s) 2757
BsrDI GCAATG 3 cut(s) 98, 214, 984
BsrI ACTGG 5 cut(s) 642, 1162, 2176, 2354, 3087
BssECI CCNNGG 6 cut(s) 874, 1615, 1650, 1785, 1960, 2224
BssSI CACGAG 1 cut(s) 668
BssT1I CCWWGG 4 cut(s) 874, 1650, 1960, 2224
Bst2BI CACGAG 1 cut(s) 668
Bst2UI CCWGG 7 cut(s) 454, 596, 741, 1617, 1787, 2350, 2516
Bst4CI ACNGT 3 cut(s) 1235, 2530, 2575
Bst6I CTCTTC 2 cut(s) 618, 1339
BstAFI CTTAAG 2 cut(s) 377, 2704
BstAPI GCANNNNNTGC 1 cut(s) 201
BstBAI YACGTR 1 cut(s) 2285
BstBI TTCGAA 1 cut(s) 523
BstC8I GCNNGC 2 cut(s) 278, 2430
BstDEI CTNAG 8 cut(s) 14, 253, 681, 1208, 1303, 1529, 2030, 2046
BstDSI CCRYGG 2 cut(s) 874, 1960
BstEII GGTNACC 1 cut(s) 3003
BstF5I GGATG 5 cut(s) 1244, 1559, 2333, 2699, 3057
BstMAI GTCTC 4 cut(s) 78, 696, 1843, 2330
BstMWI GCNNNNNNNGC 4 cut(s) 201, 2438, 2696, 2782
BstNI CCWGG 7 cut(s) 454, 596, 741, 1617, 1787, 2350, 2516
BstNSI RCATGY 6 cut(s) 54, 204, 517, 1072, 2119, 2275
BstPI GGTNACC 1 cut(s) 3003
BstSCI CCNGG 7 cut(s) 452, 594, 739, 1615, 1785, 2348, 2514
BstSFI CTRYAG 2 cut(s) 1006, 3040
BstV1I GCAGC 3 cut(s) 81, 216, 992
BstX2I RGATCY 5 cut(s) 778, 819, 905, 1282, 2950
BstXI CCANNNNNNTGG 3 cut(s) 1036, 1123, 1676
BstYI RGATCY 5 cut(s) 778, 819, 905, 1282, 2950
BsuI GTATCC 1 cut(s) 2512
BsuRI GGCC 8 cut(s) 594, 599, 660, 1115, 2175, 2353, 2432, 2905
BtgI CCRYGG 2 cut(s) 874, 1960
BtsCI GGATG 5 cut(s) 1244, 1559, 2333, 2699, 3057
BtsI GCAGTG 1 cut(s) 836
BtsIMutI CAGTG 7 cut(s) 705, 836, 1456, 2054, 2161, 2361, 2965
BveI ACCTGC 2 cut(s) 82, 2413
Cac8I GCNNGC 2 cut(s) 278, 2430
Cfr13I GGNCC 8 cut(s) 592, 659, 915, 1019, 1113, 1382, 1654, 2903
CseI GACGC 1 cut(s) 269
CsiI ACCWGGT 1 cut(s) 452
Csp6I GTAC 6 cut(s) 171, 353, 1513, 1685, 2078, 3037
CviQI GTAC 6 cut(s) 171, 353, 1513, 1685, 2078, 3037
DdeI CTNAG 8 cut(s) 14, 253, 681, 1208, 1303, 1529, 2030, 2046
DraI TTTAAA 2 cut(s) 1755, 2220
EaeI YGGCCR 1 cut(s) 2351
Eam1104I CTCTTC 2 cut(s) 618, 1339
EarI CTCTTC 2 cut(s) 618, 1339
Ecl136II GAGCTC 1 cut(s) 538
Eco130I CCWWGG 4 cut(s) 874, 1650, 1960, 2224
Eco24I GRGCYC 2 cut(s) 503, 540
Eco31I GGTCTC 1 cut(s) 78
Eco32I GATATC 1 cut(s) 2152
Eco47I GGWCC 4 cut(s) 915, 1019, 1382, 1654
Eco53kI GAGCTC 1 cut(s) 538
Eco57I CTGAAG 2 cut(s) 671, 1578
Eco88I CYCGRG 2 cut(s) 1493, 1870
Eco91I GGTNACC 1 cut(s) 3003
EcoICRI GAGCTC 1 cut(s) 538
EcoO109I RGGNCCY 1 cut(s) 659
EcoO65I GGTNACC 1 cut(s) 3003
EcoRI GAATTC 1 cut(s) 2639
EcoRII CCWGG 7 cut(s) 452, 594, 739, 1615, 1785, 2348, 2514
EcoRV GATATC 1 cut(s) 2152
EcoT14I CCWWGG 4 cut(s) 874, 1650, 1960, 2224
EcoT38I GRGCYC 2 cut(s) 503, 540
ErhI CCWWGG 4 cut(s) 874, 1650, 1960, 2224
FalI AAGNNNNNCTT 2 cut(s) 2735, 2767
FaqI GGGAC 2 cut(s) 658, 1621
FbaI TGATCA 1 cut(s) 2491
FblI GTMKAC 2 cut(s) 1134, 1797
Fnu4HI GCNGC 3 cut(s) 70, 205, 1006
FokI GGATG 5 cut(s) 1231, 1546, 2340, 2686, 3044
FriOI GRGCYC 2 cut(s) 503, 540
Fsp4HI GCNGC 3 cut(s) 70, 205, 1006
FspBI CTAG 6 cut(s) 992, 1542, 1745, 2375, 2723, 2732
GluI GCNGC 3 cut(s) 70, 205, 1006
GsuI CTGGAG 1 cut(s) 1145
HaeIII GGCC 8 cut(s) 594, 599, 660, 1115, 2175, 2353, 2432, 2905
HapII CCGG 2 cut(s) 913, 1017
HgaI GACGC 1 cut(s) 269
HincII GTYRAC 5 cut(s) 232, 1798, 2113, 2197, 2720
HindII GTYRAC 5 cut(s) 232, 1798, 2113, 2197, 2720
HindIII AAGCTT 5 cut(s) 149, 683, 1758, 1916, 2412
HpaI GTTAAC 1 cut(s) 2197
HpaII CCGG 2 cut(s) 913, 1017
HphI GGTGA 8 cut(s) 472, 1006, 1255, 1639, 1836, 2408, 2465, 2997
Hpy166II GTNNAC 7 cut(s) 232, 1135, 1798, 2113, 2197, 2277, 2720
Hpy188I TCNGA 6 cut(s) 83, 406, 1065, 1663, 2238, 2869
Hpy8I GTNNAC 7 cut(s) 232, 1135, 1798, 2113, 2197, 2277, 2720
Hpy99I CGWCG 1 cut(s) 1235
HpyAV CCTTC 9 cut(s) 311, 572, 1082, 1373, 1811, 2165, 2206, 2826, 2876
HpyCH4III ACNGT 3 cut(s) 1235, 2530, 2575
HpyCH4IV ACGT 4 cut(s) 139, 339, 1711, 2284
HpyF10VI GCNNNNNNNGC 4 cut(s) 201, 2438, 2696, 2782
HpyF3I CTNAG 8 cut(s) 14, 253, 681, 1208, 1303, 1529, 2030, 2046
HpySE526I ACGT 4 cut(s) 139, 339, 1711, 2284
KpnI GGTACC 1 cut(s) 1688
Ksp22I TGATCA 1 cut(s) 2491
KspAI GTTAAC 1 cut(s) 2197
LmnI GCTCC 3 cut(s) 59, 2687, 2709
Lsp1109I GCAGC 3 cut(s) 81, 216, 992
LweI GCATC 4 cut(s) 855, 1528, 2443, 2708
MabI ACCWGGT 1 cut(s) 452
MaeI CTAG 6 cut(s) 992, 1542, 1745, 2375, 2723, 2732
MaeII ACGT 4 cut(s) 139, 339, 1711, 2284
MaeIII GTNAC 6 cut(s) 335, 1217, 1451, 2846, 3003, 3053
MbiI CCGCTC 1 cut(s) 2757
MfeI CAATTG 4 cut(s) 63, 707, 1168, 1833
MflI RGATCY 5 cut(s) 778, 819, 905, 1282, 2950
MhlI GDGCHC 2 cut(s) 503, 540
MlsI TGGCCA 1 cut(s) 2353
MluNI TGGCCA 1 cut(s) 2353
MlyI GAGTC 6 cut(s) 680, 763, 1325, 1448, 2725, 2735
MmeI TCCRAC 4 cut(s) 756, 1314, 1833, 1914
Mox20I TGGCCA 1 cut(s) 2353
MroXI GAANNNNTTC 2 cut(s) 1189, 1880
MscI TGGCCA 1 cut(s) 2353
Msp20I TGGCCA 1 cut(s) 2353
MspA1I CMGCKG 1 cut(s) 240
MspCI CTTAAG 2 cut(s) 377, 2704
MspI CCGG 2 cut(s) 913, 1017
MspR9I CCNGG 7 cut(s) 454, 596, 741, 1617, 1787, 2350, 2516
MunI CAATTG 4 cut(s) 63, 707, 1168, 1833
MvaI CCWGG 7 cut(s) 454, 596, 741, 1617, 1787, 2350, 2516
MwoI GCNNNNNNNGC 4 cut(s) 201, 2438, 2696, 2782
NcoI CCATGG 2 cut(s) 874, 1960
NlaIV GGNNCC 5 cut(s) 593, 880, 1686, 2043, 2347
NmeAIII GCCGAG 1 cut(s) 171
NmuCI GTSAC 3 cut(s) 1217, 1451, 3003
NspI RCATGY 6 cut(s) 54, 204, 517, 1072, 2119, 2275
NspV TTCGAA 1 cut(s) 523
PaeR7I CTCGAG 2 cut(s) 1493, 1870
PciI ACATGT 2 cut(s) 2115, 2271
PdmI GAANNNNTTC 2 cut(s) 1189, 1880
PflMI CCANNNNNTGG 1 cut(s) 902
PfoI TCCNGGA 1 cut(s) 739
PkrI GCNGC 3 cut(s) 71, 206, 1007
PleI GAGTC 6 cut(s) 679, 763, 1325, 1448, 2724, 2734
PpsI GAGTC 6 cut(s) 679, 763, 1325, 1448, 2724, 2734
Ppu21I YACGTR 1 cut(s) 2285
PscI ACATGT 2 cut(s) 2115, 2271
PsiI TTATAA 1 cut(s) 3065
Psp124BI GAGCTC 1 cut(s) 540
Psp1406I AACGTT 1 cut(s) 339
Psp6I CCWGG 7 cut(s) 452, 594, 739, 1615, 1785, 2348, 2514
PspEI GGTNACC 1 cut(s) 3003
PspGI CCWGG 7 cut(s) 452, 594, 739, 1615, 1785, 2348, 2514
PspN4I GGNNCC 5 cut(s) 593, 880, 1686, 2043, 2347
PspPI GGNCC 8 cut(s) 592, 659, 915, 1019, 1113, 1382, 1654, 2903
PspXI VCTCGAGB 2 cut(s) 1493, 1870
PstI CTGCAG 2 cut(s) 1010, 3044
PsuI RGATCY 5 cut(s) 778, 819, 905, 1282, 2950
RsaI GTAC 6 cut(s) 172, 354, 1514, 1686, 2079, 3038
RsaNI GTAC 6 cut(s) 171, 353, 1513, 1685, 2078, 3037
SacI GAGCTC 1 cut(s) 540
SalI GTCGAC 1 cut(s) 1796
SatI GCNGC 3 cut(s) 70, 205, 1006
Sau96I GGNCC 8 cut(s) 592, 659, 915, 1019, 1113, 1382, 1654, 2903
ScaI AGTACT 2 cut(s) 354, 2079
SchI GAGTC 6 cut(s) 680, 763, 1325, 1448, 2725, 2735
ScrFI CCNGG 7 cut(s) 454, 596, 741, 1617, 1787, 2350, 2516
SduI GDGCHC 2 cut(s) 503, 540
SexAI ACCWGGT 1 cut(s) 452
SfaNI GCATC 4 cut(s) 855, 1528, 2443, 2708
SfcI CTRYAG 2 cut(s) 1006, 3040
Sfr274I CTCGAG 2 cut(s) 1493, 1870
SfuI TTCGAA 1 cut(s) 523
SinI GGWCC 4 cut(s) 915, 1019, 1382, 1654
SlaI CTCGAG 2 cut(s) 1493, 1870
SsiI CCGC 2 cut(s) 240, 2757
SspI AATATT 1 cut(s) 807
SspMI CTAG 6 cut(s) 992, 1542, 1745, 2375, 2723, 2732
SstI GAGCTC 1 cut(s) 540
StyD4I CCNGG 7 cut(s) 452, 594, 739, 1615, 1785, 2348, 2514
StyI CCWWGG 4 cut(s) 874, 1650, 1960, 2224
TaaI ACNGT 3 cut(s) 1235, 2530, 2575
TaiI ACGT 4 cut(s) 142, 342, 1714, 2287
TatI WGTACW 3 cut(s) 170, 352, 2077
TscAI CASTG 7 cut(s) 705, 843, 1456, 2054, 2161, 2361, 2965
TseFI GTSAC 3 cut(s) 1217, 1451, 3003
TseI GCWGC 3 cut(s) 69, 204, 1005
Tsp45I GTSAC 3 cut(s) 1217, 1451, 3003
TspGWI ACGGA 3 cut(s) 1205, 1387, 2628
TspRI CASTG 7 cut(s) 705, 843, 1456, 2054, 2161, 2361, 2965
Van91I CCANNNNNTGG 1 cut(s) 902
Vha464I CTTAAG 2 cut(s) 377, 2704
VpaK11BI GGWCC 4 cut(s) 915, 1019, 1382, 1654
XceI RCATGY 6 cut(s) 54, 204, 517, 1072, 2119, 2275
XhoI CTCGAG 2 cut(s) 1493, 1870
XmiI GTMKAC 2 cut(s) 1134, 1797
XmnI GAANNNNTTC 2 cut(s) 1189, 1880
XspI CTAG 6 cut(s) 992, 1542, 1745, 2375, 2723, 2732
ZrmI AGTACT 2 cut(s) 354, 2079
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.