RchiOBHm_Chr6g0257231

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
12497428 .. 12500706
3279 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ23072

Sequence Viewer

Length: 2973 bp
ATGGCAGTGTTCTGGGTCTTGACATCAGCAGCGAATCAATCTCAGGTGGGATTGACAATTCCAGCAGTCTCTTCCATCTTCAGCATCTACAAAGCCTCAATTTGGCGGACAACGAACTTGGCAACGGCTTATCAATTCCATCTGCAGTCGGGGCAGCTCATGAATTTGAGGTATCTAAATTTATCTGAAAATGCTTATTCAGGGAAAATTCCAATTGAGATTTCACGTTTGACGAGGTTGGTAGTTCTTGATATTTCTGGAAGATTTTTTTTGGACGCTCAGTTAAAACTTGAGATCCCAAATTTACACATGCTGGTAGAGAACCTCACACAGCTTACAAAGTTATATCTTGATGATGTCCAAATATCAGCACATGGAAGTGAGTGGTGCCAAGCCATATCATCTTCCCTTCCCAACCTCAGGGTGTTGAGCTTGTCCCATTGTAATCTTTCAGGCCTTTTTCACGAATCCCTTGCTAAGCTTCAGTCTTTATTAGTGATTCAATTGAGTTTCAACAATATCTCTGCGCCAGTTCCAAGATTCTTTGCCAACTTTTCAAACTTGACATCCTTGATTCTCAAAGATTGTAATTTGCAGGGAACATTTCCTAAAGAGGTCTTTCAGCTATCTTCTCTTCAAAGTATTGATCTTTCGCATAATGAAGGACTTCATGGTTCCTTGCCAGAATTTCCAAACAATGGATCTCTTCAGAACTTGGATTTAAGTGTGACAAGTTTTTCAGGATCATTACCAGACTCTATTGGCAACCTCAAAATGTTGTCAACCATATACATCCATGACAACAATTTTACTGGATCAATCCCCATTTCAATGACAAACCTTACGCATTTGCGTTTTTTGGAGATGTATGTAAACAACTTTGAAGGTTCAATTCCGTCATTCAGTGGGGCCAAGAATCTAGAAGGAATAGATCTCTCTTCAAATGGTCTAACAGGTAATATTAATTGCACCTACTGGGGAAACCTTACTAAACTCAGCTATATTGCCTTGGGAGACAATATGCTCAATGGGAATATTCCATCGTCTTTGCTTTCTCTTCCGTTGCTGAGAAATCTAGATCTTTCCTGGAACCAGTTCTTTGGTCAATTTCCTGAAACTTCTAATCTTTCATCCTACTTCATCAAAGATCTTGATTTGAGTATAAACAATCTGGAAGGGCCAATACCTATGTCTATCTTTAATTTACAAGGTCTTAGAACTCTTGATCTTTCTTCAAACAATTTCAGTGGCTCATTTTCTCTGGATAGTCTTCAACATCTGAGAAATCTTTATTTTCTTGATCTTTCACACAATAGCTTGTTTCTTAGCCATGGTGCTACCAATTACTCATATTCTTCCTTTCCTCAATTTCAAGACTTGAGGTTGGCTTCGGGAAAGTTGAGAACATTCCCTGATTTCTTGAGAAATCAATTCAAATTAGAGGTTTTGTATCTTTCAGATAACCAGATACAGGGCAAGATACCCAATTGGATTTGGAGGTTCAATAATCTGTTTGACCTAAACCTTTCATGCAACTCTCTAGAAACTCTAGAAGGTCCTACAATCAATCTCACTTCTATGGCATTCCTTGACCTTCATTCTAACCAGCTTCATGGGAAAATCCCAATTTCATCATCACCTAACATGTATTATCTAGATTACTCTAGGAATAACTTCAGCTCTACCATACCGACTTCCATTGCTGATCTGCTGCCTAACACTCGATTCTTCTCTATTTCAAGCAACAACCTTCAGGGGATCATTCCAGGATCAATATGCAATTCACATAACCTTGAGGTTCTTGATCTGTCCAATAATTCCTTGAGTGGCACGGTTCCTCACTGCTTGACTACATTGAGCACTCTTTCAGTACTTAATTTAAGAAGAAACAATCTTACAAATGTAGACAGGTTGTCTCACAATTGCAGTTTGCGAACTCTAGACATCAGTGAAAATCATATACAAGGTCAGCTTCCAAAATCACTCGTAAACTGCCCTCAATTAGAGGTTTTGAACCTTGGAAAGAATCAAATAACAGGTCCATTTCCATGCTTTTTGAAGAACACATCTACCCTGCGTGTCCTTGTCTTGCGATCCAACAAACTCTATGGAGGCATTGGATGTCCCAAGATTAAAGGCACTTGGCCGATGCTTCAAATTATAGACCTAGCTCACAACAATTTTAGTGGAAATGTACCAGGGAGAGATTTGACAACTTGGCAGGGAATGATGACTAATGAAGATGTTGCCTCATCAGAGCTCAATCACCTTCAATTTCAGGACAATGGAACTGGTGGCATTTATTATCAGGATACAATTACAGTTACCAACAAAGGTATAGAGATGGAGCTGGTAAAGATTTTAACAGTCTTCACCTCGATTGACTTCTCATGCAACAAGTTTACCGGATCAATACCTGAGGAAATTGGAGAACTCAAATCACTACTAGTCCTCAACTTGTCAAATAATGCTTTCACAGGTGCAATTCCACCATCAATGAGTAACTTGAGTGAGCTAGAGTCTTTAGACCTCTCACAAAACACCCTGAGCGGTCAAATTCCACCACAGCTTACAAAACTCACTTTCCTTTCATTCTTGAATCTCTCATACAATCAAATGGTCGGCAGGATTCCAAGCAGCAATCAATTTTCAACATTTCCAAAATCTTCCTTTGAAGGTAACAAAGATTTATTCGGACCTCCTTTGACTGAAGATAACACAACACGGTTTTCACCACCAGCATCGATAAAAAGCCATAGAGATGAGATTGATTGGAATCTGATTACAGTTGAGGTTGGATTCACATGTGGGTTCGGAATTGCCATTGGCTCACTTTTGTTTTGCAAGAAATGGAGGAAATGGTATTACAGAGCTATGTATAATATCCTTCTAAAGATATTTCCACAGCTGGAAGAAAGATTTGGTGATCACAGAAGACATGTTTGCTTAAGTCAAAGGTACTGGAGGCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

990

Amino Acids

110.77

Weight (kDa)

6.45

Isoelectric Point (pI)

35.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 138 - 198 8.6e-08 Leucine rich repeat
LRR_14 PF23598 297 - 533 4.5e-08 Leucine-rich repeat region
LRR_8 PF13855 382 - 440 1e-06 Leucine rich repeat
LRR_8 PF13855 479 - 537 5.9e-06 Leucine rich repeat
LRR_8 PF13855 577 - 632 1.1e-07 Leucine rich repeat
LRR_8 PF13855 597 - 654 1.1e-07 Leucine rich repeat
LRR_8 PF13855 643 - 702 3e-06 Leucine rich repeat
LRR_4 PF12799 643 - 679 1e-05 Leucine Rich repeats (2 copies)
LRR_8 PF13855 793 - 849 3.2e-06 Leucine rich repeat
LRR_14 PF23598 803 - 868 5.6e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 387
AccB7I CCANNNNNTGG 1 cut(s) 698
AccBSI CCGCTC 1 cut(s) 2550
AccI GTMKAC 1 cut(s) 1905
AciI CCGC 2 cut(s) 106, 2550
AclWI GGATC 8 cut(s) 289, 709, 751, 823, 1766, 1777, 2088, 2416
AcoI YGGCCR 1 cut(s) 2144
AcsI RAATTY 6 cut(s) 163, 178, 207, 301, 686, 2556
AcuI CTGAAG 6 cut(s) 64, 467, 692, 1660, 1736, 2730
AfaI GTAC 3 cut(s) 1872, 2196, 2960
AfiI CCNNNNNNNGG 4 cut(s) 102, 420, 698, 1471
AflII CTTAAG 1 cut(s) 2947
AflIII ACRYGT 3 cut(s) 1644, 2804, 2938
AhdI GACNNNNNGTC 1 cut(s) 1912
AhlI ACTAGT 1 cut(s) 2446
AjnI CCWGG 3 cut(s) 1085, 1765, 2197
AjuI GAANNNNNNNTTGG 4 cut(s) 205, 237, 2904, 2936
Alw21I GWGCWC 2 cut(s) 1862, 2262
Alw26I GTCTC 3 cut(s) 73, 1008, 1920
AlwI GGATC 8 cut(s) 289, 709, 751, 823, 1766, 1777, 2088, 2416
AoxI GGCC 4 cut(s) 454, 909, 1178, 2144
ApeKI GCWGC 4 cut(s) 29, 154, 1711, 2637
ApoI RAATTY 6 cut(s) 163, 178, 207, 301, 686, 2556
ArsI GACNNNNNNTTYG 2 cut(s) 2023, 2055
AseI ATTAAT 1 cut(s) 963
Asp700I GAANNNNTTC 3 cut(s) 666, 1094, 1673
AspLEI GCGC 1 cut(s) 529
AspS9I GGNCC 5 cut(s) 909, 1178, 1556, 2039, 2696
AsuHPI GGTGA 5 cut(s) 1629, 2258, 2365, 2724, 2936
AvaII GGWCC 3 cut(s) 1556, 2039, 2696
AxyI CCTNAGG 2 cut(s) 419, 2418
BanI GGYRCC 1 cut(s) 387
BanII GRGCYC 1 cut(s) 2262
BarI GAAGNNNNNNTAC 2 cut(s) 1167, 1199
BbsI GAAGAC 3 cut(s) 1262, 2362, 2941
Bbv12I GWGCWC 2 cut(s) 1862, 2262
BbvI GCAGC 4 cut(s) 41, 166, 1698, 2649
BccI CCATC 5 cut(s) 83, 147, 1048, 2338, 2500
BceAI ACGGC 1 cut(s) 141
BcgI CGANNNNNNTGC 2 cut(s) 455, 489
BciT130I CCWGG 3 cut(s) 1087, 1767, 2199
BciVI GTATCC 1 cut(s) 2305
BclI TGATCA 1 cut(s) 2926
BcoDI GTCTC 3 cut(s) 73, 1008, 1920
BcuI ACTAGT 1 cut(s) 2446
BfmI CTRYAG 1 cut(s) 143
BfrI CTTAAG 1 cut(s) 2947
BfuI GTATCC 1 cut(s) 2305
BglII AGATCT 3 cut(s) 931, 1078, 1147
BisI GCNGC 4 cut(s) 30, 155, 1712, 2638
BlpI GCTNAGC 1 cut(s) 477
BlsI GCNGC 4 cut(s) 31, 156, 1713, 2639
BmcAI AGTACT 1 cut(s) 1872
Bme1390I CCNGG 3 cut(s) 1087, 1767, 2199
Bme18I GGWCC 3 cut(s) 1556, 2039, 2696
BmeRI GACNNNNNGTC 1 cut(s) 1912
BmgT120I GGNCC 5 cut(s) 909, 1178, 1556, 2039, 2696
BmiI GGNNCC 5 cut(s) 389, 676, 910, 1091, 1836
BmrFI CCNGG 3 cut(s) 1087, 1767, 2199
BmrI ACTGGG 1 cut(s) 985
BmsI GCATC 3 cut(s) 93, 2139, 2750
BmuI ACTGGG 1 cut(s) 985
BpiI GAAGAC 3 cut(s) 1262, 2362, 2941
Bpu10I CCTNAGC 1 cut(s) 2546
Bpu1102I GCTNAGC 1 cut(s) 477
BpuEI CTTGAG 6 cut(s) 311, 1399, 1441, 1814, 1843, 2527
Bsa29I ATCGAT 1 cut(s) 2744
BsaBI GATNNNNATC 1 cut(s) 2775
BsaJI CCNNGG 4 cut(s) 1008, 1330, 2017, 2198
BsaWI WCCGGW 1 cut(s) 2405
Bsc4I CCNNNNNNNGG 4 cut(s) 102, 420, 698, 1471
Bse1I ACTGG 6 cut(s) 530, 817, 980, 1093, 2296, 2966
Bse21I CCTNAGG 2 cut(s) 419, 2418
Bse3DI GCAATG 1 cut(s) 1698
Bse8I GATNNNNATC 1 cut(s) 2775
BseBI CCWGG 3 cut(s) 1087, 1767, 2199
BseCI ATCGAT 1 cut(s) 2744
BseDI CCNNGG 4 cut(s) 1008, 1330, 2017, 2198
BseGI GGATG 4 cut(s) 566, 792, 1130, 2126
BseJI GATNNNNATC 1 cut(s) 2775
BseLI CCNNNNNNNGG 4 cut(s) 102, 420, 698, 1471
BseMI GCAATG 1 cut(s) 1698
BseMII CTCAG 8 cut(s) 56, 293, 433, 1009, 1058, 1271, 2409, 2537
BseNI ACTGG 6 cut(s) 530, 817, 980, 1093, 2296, 2966
BseXI GCAGC 4 cut(s) 41, 166, 1698, 2649
BshFI GGCC 4 cut(s) 456, 911, 1180, 2146
BshNI GGYRCC 1 cut(s) 387
BshVI ATCGAT 1 cut(s) 2744
BsiHKAI GWGCWC 2 cut(s) 1862, 2262
BsiSI CCGG 1 cut(s) 2406
BslFI GGGAC 2 cut(s) 421, 2109
BslI CCNNNNNNNGG 4 cut(s) 102, 420, 698, 1471
BsmAI GTCTC 3 cut(s) 73, 1008, 1920
BsmFI GGGAC 2 cut(s) 421, 2109
BsmI GAATGC 1 cut(s) 1583
BsnI GGCC 4 cut(s) 456, 911, 1180, 2146
Bsp1286I GDGCHC 2 cut(s) 1862, 2262
Bsp1720I GCTNAGC 1 cut(s) 477
Bsp19I CCATGG 1 cut(s) 1330
BspACI CCGC 2 cut(s) 106, 2550
BspANI GGCC 4 cut(s) 456, 911, 1180, 2146
BspCNI CTCAG 8 cut(s) 55, 292, 432, 1008, 1059, 1272, 2410, 2538
BspDI ATCGAT 1 cut(s) 2744
BspHI TCATGA 1 cut(s) 159
BspLI GGNNCC 5 cut(s) 389, 676, 910, 1091, 1836
BspMAI CTGCAG 1 cut(s) 147
BspPI GGATC 8 cut(s) 289, 709, 751, 823, 1766, 1777, 2088, 2416
BspT107I GGYRCC 1 cut(s) 387
BspTI CTTAAG 1 cut(s) 2947
BsrBI CCGCTC 1 cut(s) 2550
BsrDI GCAATG 1 cut(s) 1698
BsrI ACTGG 6 cut(s) 530, 817, 980, 1093, 2296, 2966
BssECI CCNNGG 4 cut(s) 1008, 1330, 2017, 2198
BssT1I CCWWGG 3 cut(s) 1008, 1330, 2017
Bst2UI CCWGG 3 cut(s) 1087, 1767, 2199
Bst4CI ACNGT 5 cut(s) 1834, 2323, 2368, 2727, 2788
Bst6I CTCTTC 5 cut(s) 76, 639, 711, 943, 1062
BstAFI CTTAAG 1 cut(s) 2947
BstDSI CCRYGG 1 cut(s) 1330
BstF5I GGATG 4 cut(s) 566, 792, 1130, 2126
BstHHI GCGC 1 cut(s) 529
BstMAI GTCTC 3 cut(s) 73, 1008, 1920
BstMWI GCNNNNNNNGC 1 cut(s) 151
BstNI CCWGG 3 cut(s) 1087, 1767, 2199
BstNSI RCATGY 4 cut(s) 313, 1648, 2808, 2942
BstSCI CCNGG 3 cut(s) 1085, 1765, 2197
BstSFI CTRYAG 1 cut(s) 143
BstV1I GCAGC 4 cut(s) 41, 166, 1698, 2649
BstV2I GAAGAC 3 cut(s) 1262, 2362, 2941
BstX2I RGATCY 5 cut(s) 294, 701, 931, 1078, 1147
BstXI CCANNNNNNTGG 2 cut(s) 1100, 1613
BstYI RGATCY 5 cut(s) 294, 701, 931, 1078, 1147
Bsu15I ATCGAT 1 cut(s) 2744
Bsu36I CCTNAGG 2 cut(s) 419, 2418
BsuI GTATCC 1 cut(s) 2305
BsuRI GGCC 4 cut(s) 456, 911, 1180, 2146
BsuTUI ATCGAT 1 cut(s) 2744
BtgI CCRYGG 1 cut(s) 1330
BtsCI GGATG 4 cut(s) 566, 792, 1130, 2126
BtsI GCAGTG 2 cut(s) 12, 1840
BtsIMutI CAGTG 5 cut(s) 12, 910, 1252, 1840, 1954
CciI TCATGA 1 cut(s) 159
CfoI GCGC 1 cut(s) 529
Cfr13I GGNCC 5 cut(s) 909, 1178, 1556, 2039, 2696
ClaI ATCGAT 1 cut(s) 2744
CseI GACGC 1 cut(s) 284
Csp6I GTAC 3 cut(s) 1871, 2195, 2959
CspCI CAANNNNNGTGG 4 cut(s) 1228, 1263, 2167, 2202
CviQI GTAC 3 cut(s) 1871, 2195, 2959
DriI GACNNNNNGTC 1 cut(s) 1912
EaeI YGGCCR 1 cut(s) 2144
Eam1104I CTCTTC 5 cut(s) 76, 639, 711, 943, 1062
Eam1105I GACNNNNNGTC 1 cut(s) 1912
EarI CTCTTC 5 cut(s) 76, 639, 711, 943, 1062
EciI GGCGGA 1 cut(s) 121
Ecl136II GAGCTC 1 cut(s) 2260
Eco130I CCWWGG 3 cut(s) 1008, 1330, 2017
Eco147I AGGCCT 1 cut(s) 456
Eco24I GRGCYC 1 cut(s) 2262
Eco47I GGWCC 3 cut(s) 1556, 2039, 2696
Eco53kI GAGCTC 1 cut(s) 2260
Eco57I CTGAAG 6 cut(s) 64, 467, 692, 1660, 1736, 2730
Eco81I CCTNAGG 2 cut(s) 419, 2418
EcoICRI GAGCTC 1 cut(s) 2260
EcoO109I RGGNCCY 1 cut(s) 1556
EcoRII CCWGG 3 cut(s) 1085, 1765, 2197
EcoT14I CCWWGG 3 cut(s) 1008, 1330, 2017
EcoT38I GRGCYC 1 cut(s) 2262
ErhI CCWWGG 3 cut(s) 1008, 1330, 2017
FalI AAGNNNNNCTT 2 cut(s) 1956, 1988
FaqI GGGAC 2 cut(s) 421, 2109
FbaI TGATCA 1 cut(s) 2926
FblI GTMKAC 1 cut(s) 1905
Fnu4HI GCNGC 4 cut(s) 30, 155, 1712, 2638
FokI GGATG 4 cut(s) 553, 779, 1117, 2133
FriOI GRGCYC 1 cut(s) 2262
Fsp4HI GCNGC 4 cut(s) 30, 155, 1712, 2638
GlaI GCGC 1 cut(s) 528
GluI GCNGC 4 cut(s) 30, 155, 1712, 2638
HaeIII GGCC 4 cut(s) 456, 911, 1180, 2146
HapII CCGG 1 cut(s) 2406
HgaI GACGC 1 cut(s) 284
HhaI GCGC 1 cut(s) 529
Hin6I GCGC 1 cut(s) 527
HinP1I GCGC 1 cut(s) 527
HincII GTYRAC 1 cut(s) 783
HindII GTYRAC 1 cut(s) 783
HindIII AAGCTT 1 cut(s) 479
HpaII CCGG 1 cut(s) 2406
HphI GGTGA 5 cut(s) 1629, 2258, 2365, 2724, 2936
Hpy166II GTNNAC 5 cut(s) 783, 874, 1906, 1990, 2403
Hpy188I TCNGA 8 cut(s) 187, 711, 1281, 1459, 2257, 2696, 2781, 2816
Hpy8I GTNNAC 5 cut(s) 783, 874, 1906, 1990, 2403
HpyCH4III ACNGT 5 cut(s) 1834, 2323, 2368, 2727, 2788
HpyCH4IV ACGT 1 cut(s) 226
HpyCH4V TGCA 9 cut(s) 145, 595, 969, 1533, 1779, 1926, 2394, 2483, 2844
HpyF10VI GCNNNNNNNGC 1 cut(s) 151
HpySE526I ACGT 1 cut(s) 226
HspAI GCGC 1 cut(s) 527
Ksp22I TGATCA 1 cut(s) 2926
LmnI GCTCC 1 cut(s) 2347
Lsp1109I GCAGC 4 cut(s) 41, 166, 1698, 2649
LweI GCATC 3 cut(s) 93, 2139, 2750
MaeII ACGT 1 cut(s) 226
MaeIII GTNAC 4 cut(s) 727, 2323, 2501, 2678
MbiI CCGCTC 1 cut(s) 2550
MfeI CAATTG 4 cut(s) 213, 503, 1486, 1921
MflI RGATCY 5 cut(s) 294, 701, 931, 1078, 1147
MhlI GDGCHC 2 cut(s) 1862, 2262
MlyI GAGTC 2 cut(s) 749, 2528
MmeI TCCRAC 2 cut(s) 2121, 2776
MroXI GAANNNNTTC 3 cut(s) 666, 1094, 1673
MseI TTAA 9 cut(s) 284, 722, 963, 1200, 1875, 1880, 2133, 2363, 2948
MslI CAYNNNNRTG 5 cut(s) 378, 830, 1577, 2047, 2760
MspA1I CMGCKG 1 cut(s) 2908
MspCI CTTAAG 1 cut(s) 2947
MspI CCGG 1 cut(s) 2406
MspR9I CCNGG 3 cut(s) 1087, 1767, 2199
MunI CAATTG 4 cut(s) 213, 503, 1486, 1921
Mva1269I GAATGC 1 cut(s) 1583
MvaI CCWGG 3 cut(s) 1087, 1767, 2199
MwoI GCNNNNNNNGC 1 cut(s) 151
NcoI CCATGG 1 cut(s) 1330
NlaIV GGNNCC 5 cut(s) 389, 676, 910, 1091, 1836
NmuCI GTSAC 1 cut(s) 727
NspI RCATGY 4 cut(s) 313, 1648, 2808, 2942
PagI TCATGA 1 cut(s) 159
PceI AGGCCT 1 cut(s) 456
PciI ACATGT 3 cut(s) 1644, 2804, 2938
PctI GAATGC 1 cut(s) 1583
PdmI GAANNNNTTC 3 cut(s) 666, 1094, 1673
PflMI CCANNNNNTGG 1 cut(s) 698
PfoI TCCNGGA 2 cut(s) 1085, 1765
PkrI GCNGC 4 cut(s) 31, 156, 1713, 2639
PleI GAGTC 2 cut(s) 749, 2527
PpsI GAGTC 2 cut(s) 749, 2527
PpuMI RGGWCCY 1 cut(s) 1556
PscI ACATGT 3 cut(s) 1644, 2804, 2938
PshBI ATTAAT 1 cut(s) 963
Psp124BI GAGCTC 1 cut(s) 2262
Psp5II RGGWCCY 1 cut(s) 1556
Psp6I CCWGG 3 cut(s) 1085, 1765, 2197
PspGI CCWGG 3 cut(s) 1085, 1765, 2197
PspN4I GGNNCC 5 cut(s) 389, 676, 910, 1091, 1836
PspPI GGNCC 5 cut(s) 909, 1178, 1556, 2039, 2696
PspPPI RGGWCCY 1 cut(s) 1556
PstI CTGCAG 1 cut(s) 147
PsuI RGATCY 5 cut(s) 294, 701, 931, 1078, 1147
PvuII CAGCTG 1 cut(s) 2908
RsaI GTAC 3 cut(s) 1872, 2196, 2960
RsaNI GTAC 3 cut(s) 1871, 2195, 2959
RseI CAYNNNNRTG 5 cut(s) 378, 830, 1577, 2047, 2760
SacI GAGCTC 1 cut(s) 2262
SaqAI TTAA 9 cut(s) 284, 722, 963, 1200, 1875, 1880, 2133, 2363, 2948
SatI GCNGC 4 cut(s) 30, 155, 1712, 2638
Sau96I GGNCC 5 cut(s) 909, 1178, 1556, 2039, 2696
ScaI AGTACT 1 cut(s) 1872
SchI GAGTC 2 cut(s) 749, 2528
ScrFI CCNGG 3 cut(s) 1087, 1767, 2199
SduI GDGCHC 2 cut(s) 1862, 2262
SfaNI GCATC 3 cut(s) 93, 2139, 2750
SfcI CTRYAG 1 cut(s) 143
SinI GGWCC 3 cut(s) 1556, 2039, 2696
SmiMI CAYNNNNRTG 5 cut(s) 378, 830, 1577, 2047, 2760
SmlI CTYRAG 7 cut(s) 290, 1378, 1420, 1793, 1822, 2506, 2947
SmoI CTYRAG 7 cut(s) 290, 1378, 1420, 1793, 1822, 2506, 2947
SpeI ACTAGT 1 cut(s) 2446
SseBI AGGCCT 1 cut(s) 456
SsiI CCGC 2 cut(s) 106, 2550
SspI AATATT 2 cut(s) 961, 1036
SstI GAGCTC 1 cut(s) 2262
StuI AGGCCT 1 cut(s) 456
StyD4I CCNGG 3 cut(s) 1085, 1765, 2197
StyI CCWWGG 3 cut(s) 1008, 1330, 2017
TaaI ACNGT 5 cut(s) 1834, 2323, 2368, 2727, 2788
TaiI ACGT 1 cut(s) 229
TaqI TCGA 3 cut(s) 1723, 2378, 2744
TatI WGTACW 1 cut(s) 1870
Tru1I TTAA 9 cut(s) 284, 722, 963, 1200, 1875, 1880, 2133, 2363, 2948
Tru9I TTAA 9 cut(s) 284, 722, 963, 1200, 1875, 1880, 2133, 2363, 2948
TscAI CASTG 5 cut(s) 12, 910, 1252, 1847, 1954
TseFI GTSAC 1 cut(s) 727
TseI GCWGC 4 cut(s) 29, 154, 1711, 2637
Tsp45I GTSAC 1 cut(s) 727
TspGWI ACGGA 2 cut(s) 885, 1050
TspRI CASTG 5 cut(s) 12, 910, 1252, 1847, 1954
Van91I CCANNNNNTGG 1 cut(s) 698
Vha464I CTTAAG 1 cut(s) 2947
VpaK11BI GGWCC 3 cut(s) 1556, 2039, 2696
VspI ATTAAT 1 cut(s) 963
XapI RAATTY 6 cut(s) 163, 178, 207, 301, 686, 2556
XbaI TCTAGA 6 cut(s) 919, 1075, 1540, 1549, 1654, 1939
XceI RCATGY 4 cut(s) 313, 1648, 2808, 2942
XmiI GTMKAC 1 cut(s) 1905
XmnI GAANNNNTTC 3 cut(s) 666, 1094, 1673
ZrmI AGTACT 1 cut(s) 1872
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.