RchiOBHm_Chr1g0353161

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000047
Physical Location & Seq
Reverse (-)
46470713 .. 46473016
2304 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57881

Sequence Viewer

Length: 2304 bp
ATGCAAACTTCGCTACATTTCTTCCTTTTCTTCATCACACTCTGGGTCAGTATCATCATCCCAGCAGTTCAGAGTCAGTGTATTAAAGACGAGCAATTATCATTGCTCCAATTCAAGAAAAGCCTCGTGTTCAATCATTCCACCAAGCTTGTTTCTTGGAATGCAAGTACTGATTGTTGTTCGTGGGTCGGCGTCACTTGCAGCCGTAATGGGCGTGTTCTGGTTCTTGATATAAGCAGCGAACAGATCTCAGCTGGAATTGACAGTTCCAGCAGTCTCTTCCAGCTCCATTTCCTTCAGAGCCTCAATCTGGCGGACAACCAACTTGGTGCATCCATTCCAACTGCGATCGGAAAGCTCTTGAACTTGAGGTATCTGAATTTATCTCTTAATTTTTATTCAGGGCAAATTCCCATGGAGATTTCTCGCTTAAGGAGGTTGGTAGTTCTTGATCTTTCCAGTGATTATGAGTACTTAAAACTTGGAAGTCCAAATTTACACAGGTTGGTTCACAACTTCACAGAGCTTAGAGAGTTATATCTTGATGCTGTCCAAATATCAGAACAGGGGAATGAGTGGTGCCGAGCCATATCGTCTTCCCTTCCCAACCTCAGGGTCTTGAGCATGTCCGCTTGTGATCTTTCAGGCCCTTTTCACGAGTCCCTTGCTAAGCTTCAGTCTCTATCTGTAATTAGGTTGAAATGGAACTATATCTCTGCGCCAGTTCCAGGATTCTTTGCCGACTTTTCAAATTTAACTGTCTTGGATCTCTTTGGTTGCTCGTTGCATGGAACATTTCCCAAAGATATCTTTCAATTACCTTCTCTACTACGTATTGACCTTTCAACTAATGGCCAACTTAAGGGCTCCTTGCCACAATTCCCAAACAATGGATCTCTTCAGTACTTGGACCTGAGCGGGACAAAATTTTCAGGGTTATTACCAAATTCTATCGGCAACCTCAAAATGTTGTCCACCATCTCTATTCAAGATTGCAATTTCAACGGACCGGTCCCCAAGTCAATGACAAACCTTACACAATTGGTTTATTTGAGAATGGCTAACAACAAGTTGGAAGGTTCGGTTCCGTCATTCAGTATGGCCAAGAATGCTATCAACATAGACATTTCCTACAATGGTTTAACAGGTACTATAGATTCCACCCACTGGAGAAACCTTACTAAGCTATCTCGTCTCAGTTTGAGCTCTAATAAGCTCGATGGGGATGTCCCAGCATCTTTGTTTTCTCTTCCCCTATTGTGTGATCTAGATCTTTCTAGCAATCAATTTTCTGGTCCAGTCCCTGAAATTTTAAATGTGTCTTCCTACTTGCTGAATGGTCCTGATCTTGAACTTGATTTGAGTAGCAACAATCTCGAAGGGCCACTGCCTATGTCTATCTTTAGCTTGCGAGGTCTTAAGACTCTAAATCTTTCTTCAAATAATTTAAGTGGCTCGTTTCCTCTTGATGATCTACACCAGCTGAGAAATCAATCTAACTTGCAAACATTGGACCTTTCAGATACCCAGATAAATGGCAAGGTACCCAACTGGATTTGGAGTTTTAGTAATCTTAGGTACCTAGATCTTTCTTGCAACTCCCTAGATTCTCTAGAATTTCATTCAATCAATCTCACTAATCTATATTACCTTGACCTTCATTCCAATCGGTTTCATGGCCAAATCCCAATTTTTGAACCACCTTGCAATGTCCATTATCTAGATTTCTCAAAGAATTATTACAGCTCTATCATACCGAGTACCATTGGAGATGTGTTTCTTAACGTTGAATTCTTGTTGCTTTCGAGCAATAACCTCAATGGGATCATTCCAGAATCATTATGCAATCCACAAAGTCTTAAGATTCTTGATCTGTCCAATAATTCTTTGAGTGGCACGGTTCCCCGGTGCTTGAGCATGCTTGTAGTACTCAATGTAAGGAGAAACAATCTTACATATGTTGATGAATTCTCTGAAAATTGCGGTTTAGAAACGCTAGACATCAGCGGAAATCAGATTCAAGGCCAGTTTTTAAAATCTCTTGTCAACTGCACCCAGTTAGAGATTTTAAACCTTGGAAACAATCTGATAACAGAACAATTTCCATGCTTTTTGAGGAAGACATCCACCTTGAGAGTCCTTATCTTGCGATCCAATAAATTTTATGGGCGCATTGCATGTCAGAAAACTAATGGCACTTGGCCTGTACTTCAGATCATAGATCTAGCTCACAACAATTTTAGTGGTGAAGTACCAGCTGGAACAACTTTGACAACTTGGCAAGCCATGAGGACTAGAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

767

Amino Acids

85.49

Weight (kDa)

6.28

Isoelectric Point (pI)

37.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 68 1e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 84 - 162 3.4e-07 Leucine-rich repeat region
LRR_14 PF23598 299 - 357 9.5e-09 Leucine-rich repeat region
LRR_8 PF13855 373 - 430 2.6e-06 Leucine rich repeat
LRR_8 PF13855 495 - 535 6.2e-06 Leucine rich repeat
LRR_8 PF13855 499 - 558 2.2e-06 Leucine rich repeat
LRR_4 PF12799 500 - 539 2.4e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 1543, 1578
AccB1I GGYRCC 3 cut(s) 579, 1543, 1578
AccB7I CCANNNNNTGG 2 cut(s) 890, 1167
AccBSI CCGCTC 1 cut(s) 918
AciI CCGC 5 cut(s) 314, 630, 918, 1983, 2007
AclI AACGTT 1 cut(s) 1785
AclWI GGATC 4 cut(s) 774, 901, 1832, 2145
AcoI YGGCCR 3 cut(s) 853, 1101, 1678
AcuI CTGAAG 4 cut(s) 281, 659, 884, 2195
AcyI GRCGYC 1 cut(s) 192
AfiI CCNNNNNNNGG 6 cut(s) 310, 612, 728, 862, 890, 1167
AflII CTTAAG 4 cut(s) 430, 860, 1418, 1859
AgeI ACCGGT 1 cut(s) 1009
AjnI CCWGG 1 cut(s) 727
Alw21I GWGCWC 1 cut(s) 1208
Alw26I GTCTC 3 cut(s) 281, 684, 1199
AlwI GGATC 4 cut(s) 774, 901, 1832, 2145
AlwNI CAGNNNCTG 1 cut(s) 1304
AoxI GGCC 7 cut(s) 646, 853, 1101, 1382, 1678, 2023, 2201
ApeKI GCWGC 2 cut(s) 201, 237
AsiGI ACCGGT 1 cut(s) 1009
Asp700I GAANNNNTTC 1 cut(s) 2100
Asp718I GGTACC 2 cut(s) 1543, 1578
AspLEI GCGC 2 cut(s) 721, 2172
AspS9I GGNCC 8 cut(s) 647, 910, 1007, 1012, 1295, 1340, 1382, 1513
AsuC2I CCSGG 1 cut(s) 1906
AsuHPI GGTGA 1 cut(s) 2258
AvaII GGWCC 6 cut(s) 910, 1007, 1012, 1295, 1340, 1513
AxyI CCTNAGG 1 cut(s) 611
BalI TGGCCA 3 cut(s) 855, 1103, 1680
BanI GGYRCC 3 cut(s) 579, 1543, 1578
BanII GRGCYC 2 cut(s) 869, 1208
BauI CACGAG 2 cut(s) 125, 656
BbsI GAAGAC 3 cut(s) 588, 1314, 2126
Bbv12I GWGCWC 1 cut(s) 1208
BbvI GCAGC 2 cut(s) 213, 249
BccI CCATC 2 cut(s) 986, 1214
BceAI ACGGC 1 cut(s) 189
BcgI CGANNNNNNTGC 4 cut(s) 647, 681, 1357, 1391
BciT130I CCWGG 1 cut(s) 729
BcnI CCSGG 1 cut(s) 1906
BcoDI GTCTC 3 cut(s) 281, 684, 1199
BfaI CTAG 9 cut(s) 1268, 1278, 1583, 1604, 1613, 1721, 1997, 2225, 2295
BfmI CTRYAG 1 cut(s) 1152
BfrI CTTAAG 4 cut(s) 430, 860, 1418, 1859
BglII AGATCT 4 cut(s) 246, 1270, 1585, 2221
BisI GCNGC 2 cut(s) 202, 238
BlpI GCTNAGC 1 cut(s) 669
BlsI GCNGC 2 cut(s) 203, 239
BmcAI AGTACT 4 cut(s) 169, 473, 905, 1929
Bme1390I CCNGG 2 cut(s) 729, 1906
Bme18I GGWCC 6 cut(s) 910, 1007, 1012, 1295, 1340, 1513
BmgT120I GGNCC 8 cut(s) 647, 910, 1007, 1012, 1295, 1340, 1382, 1513
BmiI GGNNCC 7 cut(s) 581, 868, 1014, 1086, 1545, 1580, 1902
BmrFI CCNGG 2 cut(s) 729, 1906
BmrI ACTGGG 1 cut(s) 2050
BmsI GCATC 3 cut(s) 341, 535, 1244
BmuI ACTGGG 1 cut(s) 2050
BpiI GAAGAC 3 cut(s) 588, 1314, 2126
BpmI CTGGAG 1 cut(s) 1189
Bpu10I CCTNAGC 1 cut(s) 914
Bpu1102I GCTNAGC 1 cut(s) 669
BpuEI CTTGAG 4 cut(s) 388, 640, 1933, 2152
BpuMI CCSGG 1 cut(s) 1906
BsaAI YACGTR 1 cut(s) 833
BsaBI GATNNNNATC 1 cut(s) 1269
BsaHI GRCGYC 1 cut(s) 192
BsaJI CCNNGG 3 cut(s) 414, 1904, 2074
BsaWI WCCGGW 1 cut(s) 1009
BsaXI ACNNNNNCTCC 2 cut(s) 1552, 1582
Bsc4I CCNNNNNNNGG 6 cut(s) 310, 612, 728, 862, 890, 1167
Bse118I RCCGGY 1 cut(s) 1009
Bse1I ACTGG 7 cut(s) 459, 722, 1172, 1298, 1556, 2026, 2056
Bse21I CCTNAGG 1 cut(s) 611
Bse3DI GCAATG 3 cut(s) 101, 1714, 2172
Bse8I GATNNNNATC 1 cut(s) 1269
BseBI CCWGG 1 cut(s) 729
BseDI CCNNGG 3 cut(s) 414, 1904, 2074
BseGI GGATG 4 cut(s) 57, 332, 1231, 2123
BseJI GATNNNNATC 1 cut(s) 1269
BseLI CCNNNNNNNGG 6 cut(s) 310, 612, 728, 862, 890, 1167
BseMI GCAATG 3 cut(s) 101, 1714, 2172
BseMII CTCAG 5 cut(s) 264, 625, 905, 1210, 1475
BseNI ACTGG 7 cut(s) 459, 722, 1172, 1298, 1556, 2026, 2056
BseXI GCAGC 2 cut(s) 213, 249
BseYI CCCAGC 2 cut(s) 61, 1231
BsgI GTGCAG 1 cut(s) 2035
Bsh1285I CGRYCG 1 cut(s) 351
BshFI GGCC 7 cut(s) 648, 855, 1103, 1384, 1680, 2025, 2203
BshNI GGYRCC 3 cut(s) 579, 1543, 1578
BshTI ACCGGT 1 cut(s) 1009
BsiEI CGRYCG 1 cut(s) 351
BsiHKAI GWGCWC 1 cut(s) 1208
BsiSI CCGG 2 cut(s) 1010, 1906
BslFI GGGAC 5 cut(s) 646, 934, 998, 1214, 1286
BslI CCNNNNNNNGG 6 cut(s) 310, 612, 728, 862, 890, 1167
BsmAI GTCTC 3 cut(s) 281, 684, 1199
BsmBI CGTCTC 1 cut(s) 1199
BsmFI GGGAC 5 cut(s) 646, 934, 998, 1214, 1286
BsmI GAATGC 2 cut(s) 166, 1114
BsnI GGCC 7 cut(s) 648, 855, 1103, 1384, 1680, 2025, 2203
Bsp1286I GDGCHC 2 cut(s) 869, 1208
Bsp1720I GCTNAGC 1 cut(s) 669
Bsp19I CCATGG 1 cut(s) 414
BspACI CCGC 5 cut(s) 314, 630, 918, 1983, 2007
BspANI GGCC 7 cut(s) 648, 855, 1103, 1384, 1680, 2025, 2203
BspCNI CTCAG 5 cut(s) 263, 624, 906, 1209, 1476
BspLI GGNNCC 7 cut(s) 581, 868, 1014, 1086, 1545, 1580, 1902
BspPI GGATC 4 cut(s) 774, 901, 1832, 2145
BspT107I GGYRCC 3 cut(s) 579, 1543, 1578
BspTI CTTAAG 4 cut(s) 430, 860, 1418, 1859
BsrBI CCGCTC 1 cut(s) 918
BsrDI GCAATG 3 cut(s) 101, 1714, 2172
BsrFI RCCGGY 1 cut(s) 1009
BsrI ACTGG 7 cut(s) 459, 722, 1172, 1298, 1556, 2026, 2056
BssAI RCCGGY 1 cut(s) 1009
BssECI CCNNGG 3 cut(s) 414, 1904, 2074
BssNI GRCGYC 1 cut(s) 192
BssSI CACGAG 2 cut(s) 125, 656
BssT1I CCWWGG 2 cut(s) 414, 2074
Bst2BI CACGAG 2 cut(s) 125, 656
Bst2UI CCWGG 1 cut(s) 729
Bst4CI ACNGT 3 cut(s) 266, 760, 1900
Bst6I CTCTTC 3 cut(s) 284, 903, 1254
BstACI GRCGYC 1 cut(s) 192
BstAFI CTTAAG 4 cut(s) 430, 860, 1418, 1859
BstBAI YACGTR 1 cut(s) 833
BstC8I GCNNGC 3 cut(s) 1409, 1919, 2283
BstDEI CTNAG 9 cut(s) 250, 527, 611, 669, 914, 1182, 1196, 1484, 1574
BstDSI CCRYGG 1 cut(s) 414
BstF5I GGATG 4 cut(s) 57, 332, 1231, 2123
BstHHI GCGC 2 cut(s) 721, 2172
BstMAI GTCTC 3 cut(s) 281, 684, 1199
BstMCI CGRYCG 1 cut(s) 351
BstMWI GCNNNNNNNGC 3 cut(s) 10, 198, 1109
BstNI CCWGG 1 cut(s) 729
BstNSI RCATGY 3 cut(s) 628, 1921, 2181
BstSCI CCNGG 2 cut(s) 727, 1904
BstSFI CTRYAG 1 cut(s) 1152
BstSNI TACGTA 1 cut(s) 833
BstV1I GCAGC 2 cut(s) 213, 249
BstV2I GAAGAC 3 cut(s) 588, 1314, 2126
BstX2I RGATCY 6 cut(s) 246, 766, 893, 1270, 1585, 2221
BstXI CCANNNNNNTGG 1 cut(s) 1535
BstYI RGATCY 6 cut(s) 246, 766, 893, 1270, 1585, 2221
Bsu36I CCTNAGG 1 cut(s) 611
BsuRI GGCC 7 cut(s) 648, 855, 1103, 1384, 1680, 2025, 2203
BtgI CCRYGG 1 cut(s) 414
BtsCI GGATG 4 cut(s) 57, 332, 1231, 2123
BtsI GCAGTG 1 cut(s) 1385
BtsIMutI CAGTG 4 cut(s) 83, 466, 1165, 1385
Cac8I GCNNGC 3 cut(s) 1409, 1919, 2283
CaiI CAGNNNCTG 1 cut(s) 1304
CfoI GCGC 2 cut(s) 721, 2172
Cfr10I RCCGGY 1 cut(s) 1009
Cfr13I GGNCC 8 cut(s) 647, 910, 1007, 1012, 1295, 1340, 1382, 1513
CpoI CGGWCCG 1 cut(s) 1007
CseI GACGC 1 cut(s) 181
CspAI ACCGGT 1 cut(s) 1009
CspCI CAANNNNNGTGG 4 cut(s) 130, 165, 2224, 2259
CspI CGGWCCG 1 cut(s) 1007
CviAII CATG 8 cut(s) 415, 625, 788, 1676, 1918, 2106, 2178, 2287
DdeI CTNAG 9 cut(s) 250, 527, 611, 669, 914, 1182, 1196, 1484, 1574
DraI TTTAAA 3 cut(s) 1314, 2034, 2070
EaeI YGGCCR 3 cut(s) 853, 1101, 1678
Eam1104I CTCTTC 3 cut(s) 284, 903, 1254
EarI CTCTTC 3 cut(s) 284, 903, 1254
EciI GGCGGA 1 cut(s) 329
Ecl136II GAGCTC 1 cut(s) 1206
Eco105I TACGTA 1 cut(s) 833
Eco130I CCWWGG 2 cut(s) 414, 2074
Eco24I GRGCYC 2 cut(s) 869, 1208
Eco32I GATATC 1 cut(s) 808
Eco47I GGWCC 6 cut(s) 910, 1007, 1012, 1295, 1340, 1513
Eco53kI GAGCTC 1 cut(s) 1206
Eco57I CTGAAG 4 cut(s) 281, 659, 884, 2195
Eco81I CCTNAGG 1 cut(s) 611
EcoICRI GAGCTC 1 cut(s) 1206
EcoO109I RGGNCCY 1 cut(s) 647
EcoRI GAATTC 2 cut(s) 1790, 1967
EcoRII CCWGG 1 cut(s) 727
EcoRV GATATC 1 cut(s) 808
EcoT14I CCWWGG 2 cut(s) 414, 2074
EcoT38I GRGCYC 2 cut(s) 869, 1208
ErhI CCWWGG 2 cut(s) 414, 2074
Esp3I CGTCTC 1 cut(s) 1199
FaeI CATG 8 cut(s) 418, 628, 791, 1679, 1921, 2109, 2181, 2290
FalI AAGNNNNNCTT 2 cut(s) 854, 886
FaqI GGGAC 5 cut(s) 646, 934, 998, 1214, 1286
FatI CATG 8 cut(s) 414, 624, 787, 1675, 1917, 2105, 2177, 2286
FauI CCCGC 1 cut(s) 911
FauNDI CATATG 1 cut(s) 1957
Fnu4HI GCNGC 2 cut(s) 202, 238
FokI GGATG 4 cut(s) 44, 319, 1238, 2110
FriOI GRGCYC 2 cut(s) 869, 1208
Fsp4HI GCNGC 2 cut(s) 202, 238
FspBI CTAG 9 cut(s) 1268, 1278, 1583, 1604, 1613, 1721, 1997, 2225, 2295
GlaI GCGC 2 cut(s) 720, 2171
GluI GCNGC 2 cut(s) 202, 238
GsaI CCCAGC 2 cut(s) 65, 1235
GsuI CTGGAG 1 cut(s) 1189
HaeIII GGCC 7 cut(s) 648, 855, 1103, 1384, 1680, 2025, 2203
HapII CCGG 2 cut(s) 1010, 1906
HgaI GACGC 1 cut(s) 181
HhaI GCGC 2 cut(s) 721, 2172
Hin1I GRCGYC 1 cut(s) 192
Hin1II CATG 8 cut(s) 418, 628, 791, 1679, 1921, 2109, 2181, 2290
Hin6I GCGC 2 cut(s) 719, 2170
HinP1I GCGC 2 cut(s) 719, 2170
HincII GTYRAC 1 cut(s) 2047
HindII GTYRAC 1 cut(s) 2047
HindIII AAGCTT 2 cut(s) 146, 671
HpaII CCGG 2 cut(s) 1010, 1906
HphI GGTGA 1 cut(s) 2258
Hpy166II GTNNAC 3 cut(s) 511, 975, 2047
Hpy8I GTNNAC 3 cut(s) 511, 975, 2047
HpyAV CCTTC 6 cut(s) 305, 611, 831, 1070, 1373, 1667
HpyCH4III ACNGT 3 cut(s) 266, 760, 1900
HpyCH4IV ACGT 2 cut(s) 832, 1785
HpyF10VI GCNNNNNNNGC 3 cut(s) 10, 198, 1109
HpyF3I CTNAG 9 cut(s) 250, 527, 611, 669, 914, 1182, 1196, 1484, 1574
HpySE526I ACGT 2 cut(s) 832, 1785
Hsp92I GRCGYC 1 cut(s) 192
Hsp92II CATG 8 cut(s) 418, 628, 791, 1679, 1921, 2109, 2181, 2290
HspAI GCGC 2 cut(s) 719, 2170
KpnI GGTACC 2 cut(s) 1547, 1582
LmnI GCTCC 3 cut(s) 111, 291, 872
Lsp1109I GCAGC 2 cut(s) 213, 249
LweI GCATC 3 cut(s) 341, 535, 1244
MaeI CTAG 9 cut(s) 1268, 1278, 1583, 1604, 1613, 1721, 1997, 2225, 2295
MaeII ACGT 2 cut(s) 832, 1785
MaeIII GTNAC 1 cut(s) 193
MbiI CCGCTC 1 cut(s) 918
MboII GAAGA 9 cut(s) 13, 22, 271, 588, 890, 1241, 1314, 1428, 2131
MfeI CAATTG 1 cut(s) 1040
MflI RGATCY 6 cut(s) 246, 766, 893, 1270, 1585, 2221
MhlI GDGCHC 2 cut(s) 869, 1208
MlsI TGGCCA 3 cut(s) 855, 1103, 1680
MluNI TGGCCA 3 cut(s) 855, 1103, 1680
MlyI GAGTC 4 cut(s) 82, 668, 1417, 2145
MmeI TCCRAC 2 cut(s) 365, 1053
Mox20I TGGCCA 3 cut(s) 855, 1103, 1680
MroXI GAANNNNTTC 1 cut(s) 2100
MscI TGGCCA 3 cut(s) 855, 1103, 1680
Msp20I TGGCCA 3 cut(s) 855, 1103, 1680
MspA1I CMGCKG 4 cut(s) 254, 1483, 2007, 2258
MspCI CTTAAG 4 cut(s) 430, 860, 1418, 1859
MspI CCGG 2 cut(s) 1010, 1906
MspR9I CCNGG 2 cut(s) 729, 1906
MunI CAATTG 1 cut(s) 1040
Mva1269I GAATGC 2 cut(s) 166, 1114
MvaI CCWGG 1 cut(s) 729
MwoI GCNNNNNNNGC 3 cut(s) 10, 198, 1109
NciI CCSGG 1 cut(s) 1906
NcoI CCATGG 1 cut(s) 414
NdeI CATATG 1 cut(s) 1957
NlaIII CATG 8 cut(s) 418, 628, 791, 1679, 1921, 2109, 2181, 2290
NlaIV GGNNCC 7 cut(s) 581, 868, 1014, 1086, 1545, 1580, 1902
NmeAIII GCCGAG 1 cut(s) 608
NmuCI GTSAC 1 cut(s) 193
NspI RCATGY 3 cut(s) 628, 1921, 2181
PaeI GCATGC 1 cut(s) 1921
PctI GAATGC 2 cut(s) 166, 1114
PdmI GAANNNNTTC 1 cut(s) 2100
PfeI GAWTC 6 cut(s) 732, 1157, 1607, 1835, 1864, 2017
PflMI CCANNNNNTGG 2 cut(s) 890, 1167
PfoI TCCNGGA 1 cut(s) 727
PinAI ACCGGT 1 cut(s) 1009
PkrI GCNGC 2 cut(s) 203, 239
Ple19I CGATCG 1 cut(s) 351
PleI GAGTC 4 cut(s) 81, 667, 1417, 2144
PpsI GAGTC 4 cut(s) 81, 667, 1417, 2144
Ppu21I YACGTR 1 cut(s) 833
Psp124BI GAGCTC 1 cut(s) 1208
Psp1406I AACGTT 1 cut(s) 1785
Psp6I CCWGG 1 cut(s) 727
PspFI CCCAGC 2 cut(s) 61, 1231
PspGI CCWGG 1 cut(s) 727
PspN4I GGNNCC 7 cut(s) 581, 868, 1014, 1086, 1545, 1580, 1902
PspPI GGNCC 8 cut(s) 647, 910, 1007, 1012, 1295, 1340, 1382, 1513
PstNI CAGNNNCTG 1 cut(s) 1304
PsuI RGATCY 6 cut(s) 246, 766, 893, 1270, 1585, 2221
PvuI CGATCG 1 cut(s) 351
PvuII CAGCTG 3 cut(s) 254, 1483, 2258
Rsr2I CGGWCCG 1 cut(s) 1007
RsrII CGGWCCG 1 cut(s) 1007
SacI GAGCTC 1 cut(s) 1208
SatI GCNGC 2 cut(s) 202, 238
Sau96I GGNCC 8 cut(s) 647, 910, 1007, 1012, 1295, 1340, 1382, 1513
ScaI AGTACT 4 cut(s) 169, 473, 905, 1929
SchI GAGTC 4 cut(s) 82, 668, 1417, 2145
ScrFI CCNGG 2 cut(s) 729, 1906
SduI GDGCHC 2 cut(s) 869, 1208
SfaNI GCATC 3 cut(s) 341, 535, 1244
SfcI CTRYAG 1 cut(s) 1152
SinI GGWCC 6 cut(s) 910, 1007, 1012, 1295, 1340, 1513
SmlI CTYRAG 8 cut(s) 367, 430, 619, 860, 1418, 1859, 1912, 2131
SmoI CTYRAG 8 cut(s) 367, 430, 619, 860, 1418, 1859, 1912, 2131
SnaBI TACGTA 1 cut(s) 833
SphI GCATGC 1 cut(s) 1921
SsiI CCGC 5 cut(s) 314, 630, 918, 1983, 2007
SspMI CTAG 9 cut(s) 1268, 1278, 1583, 1604, 1613, 1721, 1997, 2225, 2295
SstI GAGCTC 1 cut(s) 1208
StyD4I CCNGG 2 cut(s) 727, 1904
StyI CCWWGG 2 cut(s) 414, 2074
TaaI ACNGT 3 cut(s) 266, 760, 1900
TaiI ACGT 2 cut(s) 835, 1788
TaqI TCGA 3 cut(s) 1218, 1377, 1805
TatI WGTACW 5 cut(s) 167, 471, 903, 1927, 2206
TfiI GAWTC 6 cut(s) 732, 1157, 1607, 1835, 1864, 2017
TscAI CASTG 4 cut(s) 83, 466, 1172, 1392
TseFI GTSAC 1 cut(s) 193
TseI GCWGC 2 cut(s) 201, 237
Tsp45I GTSAC 1 cut(s) 193
TspDTI ATGAA 5 cut(s) 22, 1610, 1649, 1664, 1980
TspGWI ACGGA 2 cut(s) 1020, 1077
TspRI CASTG 4 cut(s) 83, 466, 1172, 1392
Van91I CCANNNNNTGG 2 cut(s) 890, 1167
Vha464I CTTAAG 4 cut(s) 430, 860, 1418, 1859
VpaK11BI GGWCC 6 cut(s) 910, 1007, 1012, 1295, 1340, 1513
XbaI TCTAGA 3 cut(s) 1267, 1612, 1720
XceI RCATGY 3 cut(s) 628, 1921, 2181
XmnI GAANNNNTTC 1 cut(s) 2100
XspI CTAG 9 cut(s) 1268, 1278, 1583, 1604, 1613, 1721, 1997, 2225, 2295
ZrmI AGTACT 4 cut(s) 169, 473, 905, 1929
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.