Rw5G025130

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
35682644 .. 35688369
5726 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G025130.1

Sequence Viewer

Length: 3186 bp
ATGAAAACTCTGCTCAACTTCTTCCTCTTCTTGATTAGTATTTCTGTTCATATCATTTCTCAAGTTCACAGCCTCTGTAATGAAGACCAGCAACTATCATTGCTTCATTTGAAGCAAACCGTCGTGTTCGATTCCTCTGCTTCTTCCAAGCTCAAATCATGGAATTCAAGCTCAGACTGTTGCTCTTGGCTTGGTGTAACTTGCAGTACTAATGGGCGTATCATCGGTCTTGATCTCAGCACCGAATCTATCTCAAGTGGCATTGACAATTCCAGCAGTCTCTTCCATCTTCAAGATCTTCAAAGCCTTAATTTGGCCTACAATTATGACTTCAGTGGCTCTCAGATCCCAACTGCCGTTGGAAAGCTCACAAACTTGAGGTATCTAAACTTATCTCACAATTCTTACTTCGGGCAAATTCCCATTGAGATATCATACTTGACAAGGTTGGTTATCTTTGATATTTCTGGCAATTTCTTCTCAACCGATCAGTTAAAACTTGAGAACCCAAATTTAACCAAGCTAGTTCAGAACCTCACAGACCTAACAGAGTTGTATCTTGATGATGTCAATATATCAGCACAGGGCAGTGACTGGTCCCAAGCAATATCTTTACTGCCAAACATGAGGGTGCTGAGCTTGTATGCTTGTGATCTTTCAGGCCCTATTCATGACTCAGTTGCTAAGCTTCATTCTCTATCTGTGATTATATTGGATCATAACCAAATCTCTGCTCCAGTTCCAGGATTCTTTGCCAATTTTTCAAACTTGACTTACTTAAGTCTTGTTGATTGTGGGTTGCAAGGAACATTTCCCAAAGAGATATTCCAGTTATCTACATTACAGAGTATTGACCTGACATTAAATCCACAGCTTCAAGGTTCCTTGCCAGAGTTACCCGAAAATGGATCTCTTCAGTCCTTGGTTCTAAGCCAGACAAATTTTTCAGGGGTCCTGCCAAACTCTATAGGTAACCTCAATATGCTCTCTAGAATGGATCTTTCAGTTTGTAGCTTCAGTGGATCAATCCCAAAGTCAGTGGCAAACCTAACACAGTTGGTGAGTTTGTCTATGTCATCAAATAGGTTTGATGGCTCCATTGCTTCTATTCAGTGGAAAAACCTTGTTAATCTGAACTTTTTCATGTTGGACTCCAATCTACTTTCTGGGACTATTCCCTTGTCTCTCTTCTCTATTCCACTGCTGAGTAGACTAGTACTCTCTGACAATCAATTCTCTGGTCAAGTCCCTGAGTTTGCCAATATCTCTTCGTACTTACTGGAGACCCTTGATTTGAGTGGCAACAATTTGGTAGGATCAATACCCATATCTATATTTAATCTTCGAGGACTTTCTCAGCTTTATCTTTCTTCAAACAACTTGAGTGGCTTTCCTTTCAGTGGTATTCAACAGTCGAGAAATCTTTCATTTCTTGATCTTTCCCACAATAGCTTGTTGTTTAATGATGACAGTACCAATTCATCGCATTCCTCCTTACTTCAGGTTCAGGACTTGGTATTGGCTTCTAACAAGTTGAGAGCATTCCCAGATTTCTTGAGACACCAATTCCGATTAGCCTCTTTGGACCTTTCAGAACACCAGATACAGGGGCAGATTCCCAATTGGATTTGGAGCCTCAGTTCTCTTAAAAAACTAAATCTCTCTTCAAACTCTTTGGTAACTCTAGAAGCTCCTTTGTTGAACTCTACTTCAACTGTGACTTCGCTCGACCTTCATTCAAACCAGCTTCAGGGACAAATCCCAATTTTCCTACCATTTGCCAATTACTTGGATTACTCAAAAAATAACTTCACCTCTAGTATACCGACTGACATTGGTAATTATATCTCTTCCACTGCCTATCTCTCTCTGTCAAGCAGTAACTTGCATGGGATCATTCCAAGTTCAATATGCAATGCAAGCGGTCTGGTTCTTGACTTGTCCAATAATTCTCTGAGTGGCATCATTCCCGAATGCTTGACTCAGCTTTCAGTACTTGATTTAGGGAGAAACAACCTGACTGGCACTATTCCTGATAAGTTTCTAGAACAATGTAGCTTAAAAACTCTGGACCTCAGCAGAAATCAGATTGAAGGTCAGTTTCCAAGATCTCTAGTCAACTGCACACAGTTAGAGGTTTTAAGCCTCGGAAACAATCAGATAACAGATACATTTCCATGCTTATTGAAGAACATATCCACATTGCGTGTTCTTGTTTTGCGATCCAACAAATTTTACGGACAGATTGAATGTCCTGGGACAAATGGTACCTGGCCAATGCTTCAAATCATAGACTTAGCTCATAACAATTTGAGTGGTGAGATAACAGGAACATCTTTGACAACATGGCAGGCAATGATGGCTAATGGAGATGATACCCCAATTGACCTTGGATTCTCATTCCAACCAGGCGGTGGAAGTGGGCTTGATATTTATTATGGAGATTCAATCACAACTACTAGCAAAGGTTTAGAGATGGATCTGGTAAAGATACTTACAGTTTTCACCTCGATTGACTTTTCGAGCAACAAATTCAGTGGATCAATACCTAAGGAAATGGGAGAATTCAAAGCACTATATGTCCTTAACCTGTCCGGTAATTCTTTCACAGGAGAAATTCCATCATCATTTGGTAACATGCGACGACTTGAGTCCTTAGATTTGTCACAGAACAGACTGAATGGGCAAATTCCACCAGAGTTTGCAGGGCTTAATTTTCTTTCATACTTGAATCTGTCAGACAATGAACTGGTTGGAAGGATCCCAACAAGTACTCAGTTTTCAACATTTCCAAAAGCTGCCTTTGTCGGTAATGAGGGATTATGGGGACCTCCTTTGACGGAGGATAACATAACAACATTGTCACCACCAGCACTAAGTGAAAGCTCTCCTAATCCTGGACATGACATTGATTGGAATATTATCAGCGTTGAAATTGGATATACATTTGGCTTCGGAATTGCCATTGGTTCACTTATGTTTTGCAAGAGATGGAGAGAATGGTATTACAGATCTATAATTTTTTTTGTTTTTGTTTTTTCTTTTTTTACACTTTTGGTGAAAATTTTACATTTCATACAAAACCATGTCTTCCCAAGATCTTTCATCTCAAATTCGAATTTCAAATACTTAGCAGTTTCCTTTAACTCATCTAGAGTTCCAATTAGGTTCATGTCATCGACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1061

Amino Acids

116.76

Weight (kDa)

5.12

Isoelectric Point (pI)

37.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 28 - 69 1.8e-09 Leucine rich repeat N-terminal domain
LRR_8 PF13855 427 - 485 6.2e-07 Leucine rich repeat
LRR_8 PF13855 662 - 721 1.1e-09 Leucine rich repeat
LRR_4 PF12799 686 - 724 1.6e-07 Leucine Rich repeats (2 copies)
LRR_8 PF13855 859 - 917 3.4e-10 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 2267
AccB1I GGYRCC 1 cut(s) 2267
AccB7I CCANNNNNTGG 1 cut(s) 2414
AccI GTMKAC 2 cut(s) 1210, 1822
AciI CCGC 2 cut(s) 1923, 2412
AcoI YGGCCR 1 cut(s) 2273
AcuI CTGAAG 5 cut(s) 316, 899, 1000, 1484, 1733
AdeI CACNNNGTG 1 cut(s) 2879
AfaI GTAC 7 cut(s) 208, 1218, 1274, 1474, 1995, 2269, 2773
AfiI CCNNNNNNNGG 8 cut(s) 313, 743, 905, 1400, 1606, 1750, 2414, 2897
AflII CTTAAG 1 cut(s) 778
AhlI ACTAGT 1 cut(s) 1213
AjnI CCWGG 5 cut(s) 742, 2254, 2270, 2407, 2896
AjuI GAANNNNNNNTTGG 2 cut(s) 809, 841
AloI GAACNNNNNNTCC 2 cut(s) 1624, 1656
Alw26I GTCTC 4 cut(s) 284, 1188, 1277, 1552
AlwNI CAGNNNCTG 2 cut(s) 75, 594
AoxI GGCC 3 cut(s) 315, 661, 2273
ApeKI GCWGC 1 cut(s) 2798
ArsI GACNNNNNNTTYG 2 cut(s) 1276, 1308
Asp700I GAANNNNTTC 2 cut(s) 1139, 1423
Asp718I GGTACC 1 cut(s) 2267
AspS9I GGNCC 6 cut(s) 597, 662, 952, 1585, 2071, 2828
AsuHPI GGTGA 6 cut(s) 1072, 1804, 2330, 2497, 2856, 3070
AsuII TTCGAA 1 cut(s) 3116
AvaII GGWCC 5 cut(s) 597, 952, 1585, 2071, 2828
AxyI CCTNAGG 1 cut(s) 2550
BalI TGGCCA 1 cut(s) 2275
BamHI GGATCC 1 cut(s) 2760
BanI GGYRCC 1 cut(s) 2267
BbsI GAAGAC 2 cut(s) 90, 3082
BbvCI CCTCAGC 1 cut(s) 2075
BbvI GCAGC 1 cut(s) 2785
BccI CCATC 6 cut(s) 294, 1085, 2353, 2470, 2629, 2985
BceAI ACGGC 1 cut(s) 341
BcgI CGANNNNNNTGC 2 cut(s) 119, 153
BciT130I CCWGG 5 cut(s) 744, 2256, 2272, 2409, 2898
BcoDI GTCTC 4 cut(s) 284, 1188, 1277, 1552
BcuI ACTAGT 1 cut(s) 1213
BfaI CTAG 9 cut(s) 524, 990, 1214, 1685, 1818, 2045, 2114, 2460, 3153
BfmI CTRYAG 1 cut(s) 966
BfrI CTTAAG 1 cut(s) 778
BglII AGATCT 4 cut(s) 295, 2108, 3011, 3098
BisI GCNGC 1 cut(s) 2799
BlpI GCTNAGC 2 cut(s) 635, 684
BlsI GCNGC 1 cut(s) 2800
BmcAI AGTACT 4 cut(s) 208, 1218, 1995, 2773
Bme1390I CCNGG 5 cut(s) 744, 2256, 2272, 2409, 2898
Bme18I GGWCC 5 cut(s) 597, 952, 1585, 2071, 2828
BmgT120I GGNCC 6 cut(s) 597, 662, 952, 1585, 2071, 2828
BmiI GGNNCC 8 cut(s) 599, 883, 953, 1096, 1634, 2269, 2762, 2829
BmrFI CCNGG 5 cut(s) 744, 2256, 2272, 2409, 2898
BmsI GCATC 1 cut(s) 1971
BoxI GACNNNNGTC 1 cut(s) 2650
BpiI GAAGAC 2 cut(s) 90, 3082
BpmI CTGGAG 2 cut(s) 720, 1301
Bpu10I CCTNAGC 1 cut(s) 2075
Bpu1102I GCTNAGC 2 cut(s) 635, 684
Bpu14I TTCGAA 1 cut(s) 3116
BpuEI CTTGAG 7 cut(s) 45, 238, 397, 521, 1402, 1576, 2669
BsaI GGTCTC 1 cut(s) 1277
BsaJI CCNNGG 4 cut(s) 921, 2146, 2255, 2389
BsaWI WCCGGW 1 cut(s) 2594
BsaXI ACNNNNNCTCC 2 cut(s) 1624, 1654
Bsc4I CCNNNNNNNGG 8 cut(s) 313, 743, 905, 1400, 1606, 1750, 2414, 2897
Bse1I ACTGG 6 cut(s) 599, 737, 829, 1284, 2026, 2754
Bse21I CCTNAGG 1 cut(s) 2550
Bse3DI GCAATG 5 cut(s) 98, 1098, 1921, 2201, 2361
BseBI CCWGG 5 cut(s) 744, 2256, 2272, 2409, 2898
BseDI CCNNGG 4 cut(s) 921, 2146, 2255, 2389
BseLI CCNNNNNNNGG 8 cut(s) 313, 743, 905, 1400, 1606, 1750, 2414, 2897
BseMI GCAATG 5 cut(s) 98, 1098, 1921, 2201, 2361
BseNI ACTGG 6 cut(s) 599, 737, 829, 1284, 2026, 2754
BseXI GCAGC 1 cut(s) 2785
BsgI GTGCAG 1 cut(s) 2107
BshFI GGCC 3 cut(s) 317, 663, 2275
BshNI GGYRCC 1 cut(s) 2267
BsiSI CCGG 1 cut(s) 2595
BslFI GGGAC 6 cut(s) 583, 1183, 1232, 1767, 2272, 2841
BslI CCNNNNNNNGG 8 cut(s) 313, 743, 905, 1400, 1606, 1750, 2414, 2897
BsmAI GTCTC 4 cut(s) 284, 1188, 1277, 1552
BsmFI GGGAC 6 cut(s) 583, 1183, 1232, 1767, 2272, 2841
BsmI GAATGC 3 cut(s) 1486, 1541, 1979
BsnI GGCC 3 cut(s) 317, 663, 2275
Bso31I GGTCTC 1 cut(s) 1277
Bsp119I TTCGAA 1 cut(s) 3116
Bsp1720I GCTNAGC 2 cut(s) 635, 684
BspACI CCGC 2 cut(s) 1923, 2412
BspANI GGCC 3 cut(s) 317, 663, 2275
BspHI TCATGA 1 cut(s) 670
BspLI GGNNCC 8 cut(s) 599, 883, 953, 1096, 1634, 2269, 2762, 2829
BspT104I TTCGAA 1 cut(s) 3116
BspT107I GGYRCC 1 cut(s) 2267
BspTI CTTAAG 1 cut(s) 778
BspTNI GGTCTC 1 cut(s) 1277
BsrDI GCAATG 5 cut(s) 98, 1098, 1921, 2201, 2361
BsrI ACTGG 6 cut(s) 599, 737, 829, 1284, 2026, 2754
BssECI CCNNGG 4 cut(s) 921, 2146, 2255, 2389
BssNAI GTATAC 1 cut(s) 1823
BssT1I CCWWGG 2 cut(s) 921, 2389
Bst1107I GTATAC 1 cut(s) 1823
Bst2UI CCWGG 5 cut(s) 744, 2256, 2272, 2409, 2898
Bst4CI ACNGT 8 cut(s) 121, 179, 1056, 1413, 1472, 1717, 2130, 2500
Bst6I CTCTTC 7 cut(s) 32, 287, 918, 1193, 1273, 1669, 1855
BstAFI CTTAAG 1 cut(s) 778
BstBI TTCGAA 1 cut(s) 3116
BstC8I GCNNGC 2 cut(s) 1921, 2352
BstEII GGTNACC 1 cut(s) 971
BstMAI GTCTC 4 cut(s) 284, 1188, 1277, 1552
BstMWI GCNNNNNNNGC 2 cut(s) 1920, 2360
BstNI CCWGG 5 cut(s) 744, 2256, 2272, 2409, 2898
BstNSI RCATGY 1 cut(s) 2641
BstPAI GACNNNNGTC 1 cut(s) 2650
BstPI GGTNACC 1 cut(s) 971
BstSCI CCNGG 5 cut(s) 742, 2254, 2270, 2407, 2896
BstSFI CTRYAG 1 cut(s) 966
BstV1I GCAGC 1 cut(s) 2785
BstV2I GAAGAC 2 cut(s) 90, 3082
BstX2I RGATCY 9 cut(s) 295, 345, 908, 997, 2108, 2479, 2760, 3011, 3098
BstXI CCANNNNNNTGG 1 cut(s) 1789
BstYI RGATCY 9 cut(s) 295, 345, 908, 997, 2108, 2479, 2760, 3011, 3098
BstZ17I GTATAC 1 cut(s) 1823
Bsu36I CCTNAGG 1 cut(s) 2550
BsuRI GGCC 3 cut(s) 317, 663, 2275
BtgZI GCGATG 1 cut(s) 1467
BtsI GCAGTG 3 cut(s) 595, 1199, 1854
BtsIMutI CAGTG 9 cut(s) 340, 595, 1024, 1044, 1118, 1199, 1405, 1854, 2542
Cac8I GCNNGC 2 cut(s) 1921, 2352
CaiI CAGNNNCTG 2 cut(s) 75, 594
CciI TCATGA 1 cut(s) 670
Cfr13I GGNCC 6 cut(s) 597, 662, 952, 1585, 2071, 2828
Csp6I GTAC 7 cut(s) 207, 1217, 1273, 1473, 1994, 2268, 2772
CspCI CAANNNNNGTGG 8 cut(s) 1020, 1055, 1366, 1401, 2296, 2331, 2518, 2553
CviQI GTAC 7 cut(s) 207, 1217, 1273, 1473, 1994, 2268, 2772
DraIII CACNNNGTG 1 cut(s) 2879
EaeI YGGCCR 1 cut(s) 2273
Eam1104I CTCTTC 7 cut(s) 32, 287, 918, 1193, 1273, 1669, 1855
EarI CTCTTC 7 cut(s) 32, 287, 918, 1193, 1273, 1669, 1855
Eco130I CCWWGG 2 cut(s) 921, 2389
Eco31I GGTCTC 1 cut(s) 1277
Eco32I GATATC 1 cut(s) 432
Eco47I GGWCC 5 cut(s) 597, 952, 1585, 2071, 2828
Eco57I CTGAAG 5 cut(s) 316, 899, 1000, 1484, 1733
Eco81I CCTNAGG 1 cut(s) 2550
Eco91I GGTNACC 1 cut(s) 971
EcoO109I RGGNCCY 3 cut(s) 662, 952, 2828
EcoO65I GGTNACC 1 cut(s) 971
EcoRI GAATTC 2 cut(s) 163, 2564
EcoRII CCWGG 5 cut(s) 742, 2254, 2270, 2407, 2896
EcoRV GATATC 1 cut(s) 432
EcoT14I CCWWGG 2 cut(s) 921, 2389
ErhI CCWWGG 2 cut(s) 921, 2389
FaqI GGGAC 6 cut(s) 583, 1183, 1232, 1767, 2272, 2841
FblI GTMKAC 2 cut(s) 1210, 1822
Fnu4HI GCNGC 1 cut(s) 2799
Fsp4HI GCNGC 1 cut(s) 2799
FspBI CTAG 9 cut(s) 524, 990, 1214, 1685, 1818, 2045, 2114, 2460, 3153
GluI GCNGC 1 cut(s) 2799
GsuI CTGGAG 2 cut(s) 720, 1301
HaeIII GGCC 3 cut(s) 317, 663, 2275
HapII CCGG 1 cut(s) 2595
HincII GTYRAC 1 cut(s) 2119
HindII GTYRAC 1 cut(s) 2119
HindIII AAGCTT 1 cut(s) 686
HpaII CCGG 1 cut(s) 2595
HphI GGTGA 6 cut(s) 1072, 1804, 2330, 2497, 2856, 3070
Hpy166II GTNNAC 5 cut(s) 67, 1211, 1823, 2119, 2972
Hpy8I GTNNAC 5 cut(s) 67, 1211, 1823, 2119, 2972
Hpy99I CGWCG 2 cut(s) 125, 2646
HpyAV CCTTC 3 cut(s) 1742, 2087, 2751
HpyCH4III ACNGT 8 cut(s) 121, 179, 1056, 1413, 1472, 1717, 2130, 2500
HpyCH4V TGCA 8 cut(s) 204, 802, 1888, 1914, 1919, 2124, 2705, 2985
HpyF10VI GCNNNNNNNGC 2 cut(s) 1920, 2360
KpnI GGTACC 1 cut(s) 2271
LmnI GCTCC 4 cut(s) 739, 1100, 1632, 1696
Lsp1109I GCAGC 1 cut(s) 2785
LweI GCATC 1 cut(s) 1971
MaeI CTAG 9 cut(s) 524, 990, 1214, 1685, 1818, 2045, 2114, 2460, 3153
MfeI CAATTG 2 cut(s) 1621, 2382
MflI RGATCY 9 cut(s) 295, 345, 908, 997, 2108, 2479, 2760, 3011, 3098
MlsI TGGCCA 1 cut(s) 2275
MluNI TGGCCA 1 cut(s) 2275
MlyI GAGTC 4 cut(s) 668, 1145, 1975, 2660
MmeI TCCRAC 5 cut(s) 340, 1128, 2250, 2428, 2734
Mox20I TGGCCA 1 cut(s) 2275
MroXI GAANNNNTTC 2 cut(s) 1139, 1423
MscI TGGCCA 1 cut(s) 2275
MslI CAYNNNNRTG 2 cut(s) 629, 2176
Msp20I TGGCCA 1 cut(s) 2275
MspCI CTTAAG 1 cut(s) 778
MspI CCGG 1 cut(s) 2595
MspR9I CCNGG 5 cut(s) 744, 2256, 2272, 2409, 2898
MunI CAATTG 2 cut(s) 1621, 2382
Mva1269I GAATGC 3 cut(s) 1486, 1541, 1979
MvaI CCWGG 5 cut(s) 744, 2256, 2272, 2409, 2898
MwoI GCNNNNNNNGC 2 cut(s) 1920, 2360
NlaIV GGNNCC 8 cut(s) 599, 883, 953, 1096, 1634, 2269, 2762, 2829
NmuCI GTSAC 4 cut(s) 590, 1717, 2664, 2862
NspI RCATGY 1 cut(s) 2641
NspV TTCGAA 1 cut(s) 3116
PagI TCATGA 1 cut(s) 670
PctI GAATGC 3 cut(s) 1486, 1541, 1979
PdmI GAANNNNTTC 2 cut(s) 1139, 1423
PfeI GAWTC 7 cut(s) 131, 245, 747, 1615, 2394, 2444, 2731
PflMI CCANNNNNTGG 1 cut(s) 2414
PfoI TCCNGGA 2 cut(s) 742, 2896
PkrI GCNGC 1 cut(s) 2800
PleI GAGTC 4 cut(s) 668, 1145, 1975, 2659
PpsI GAGTC 4 cut(s) 668, 1145, 1975, 2659
PpuMI RGGWCCY 2 cut(s) 952, 2828
PshAI GACNNNNGTC 1 cut(s) 2650
Psp5II RGGWCCY 2 cut(s) 952, 2828
Psp6I CCWGG 5 cut(s) 742, 2254, 2270, 2407, 2896
PspEI GGTNACC 1 cut(s) 971
PspGI CCWGG 5 cut(s) 742, 2254, 2270, 2407, 2896
PspN4I GGNNCC 8 cut(s) 599, 883, 953, 1096, 1634, 2269, 2762, 2829
PspPI GGNCC 6 cut(s) 597, 662, 952, 1585, 2071, 2828
PspPPI RGGWCCY 2 cut(s) 952, 2828
PsrI GAACNNNNNNTAC 2 cut(s) 1587, 1619
PstNI CAGNNNCTG 2 cut(s) 75, 594
PsuI RGATCY 9 cut(s) 295, 345, 908, 997, 2108, 2479, 2760, 3011, 3098
RsaI GTAC 7 cut(s) 208, 1218, 1274, 1474, 1995, 2269, 2773
RsaNI GTAC 7 cut(s) 207, 1217, 1273, 1473, 1994, 2268, 2772
RseI CAYNNNNRTG 2 cut(s) 629, 2176
SatI GCNGC 1 cut(s) 2799
Sau96I GGNCC 6 cut(s) 597, 662, 952, 1585, 2071, 2828
ScaI AGTACT 4 cut(s) 208, 1218, 1995, 2773
SchI GAGTC 4 cut(s) 668, 1145, 1975, 2660
ScrFI CCNGG 5 cut(s) 744, 2256, 2272, 2409, 2898
SfaNI GCATC 1 cut(s) 1971
SfcI CTRYAG 1 cut(s) 966
SfuI TTCGAA 1 cut(s) 3116
SinI GGWCC 5 cut(s) 597, 952, 1585, 2071, 2828
SmiMI CAYNNNNRTG 2 cut(s) 629, 2176
SmlI CTYRAG 8 cut(s) 60, 253, 376, 500, 778, 1381, 1555, 2648
SmoI CTYRAG 8 cut(s) 60, 253, 376, 500, 778, 1381, 1555, 2648
SpeI ACTAGT 1 cut(s) 1213
SsiI CCGC 2 cut(s) 1923, 2412
SspI AATATT 1 cut(s) 2920
SspMI CTAG 9 cut(s) 524, 990, 1214, 1685, 1818, 2045, 2114, 2460, 3153
StyD4I CCNGG 5 cut(s) 742, 2254, 2270, 2407, 2896
StyI CCWWGG 2 cut(s) 921, 2389
TaaI ACNGT 8 cut(s) 121, 179, 1056, 1413, 1472, 1717, 2130, 2500
TaqI TCGA 8 cut(s) 129, 1345, 1415, 1728, 2510, 2522, 3116, 3179
TaqII GACCGA 1 cut(s) 215
TatI WGTACW 4 cut(s) 206, 1216, 1993, 2771
TfiI GAWTC 7 cut(s) 131, 245, 747, 1615, 2394, 2444, 2731
TscAI CASTG 9 cut(s) 340, 595, 1024, 1044, 1118, 1206, 1405, 1861, 2542
TseFI GTSAC 4 cut(s) 590, 1717, 2664, 2862
TseI GCWGC 1 cut(s) 2798
Tsp45I GTSAC 4 cut(s) 590, 1717, 2664, 2862
TspGWI ACGGA 2 cut(s) 2253, 2855
TspRI CASTG 9 cut(s) 340, 595, 1024, 1044, 1118, 1206, 1405, 1861, 2542
Van91I CCANNNNNTGG 1 cut(s) 2414
Vha464I CTTAAG 1 cut(s) 778
VpaK11BI GGWCC 5 cut(s) 597, 952, 1585, 2071, 2828
XbaI TCTAGA 4 cut(s) 989, 1684, 2044, 3152
XceI RCATGY 1 cut(s) 2641
XcmI CCANNNNNNNNNTGG 1 cut(s) 2411
XmiI GTMKAC 2 cut(s) 1210, 1822
XmnI GAANNNNTTC 2 cut(s) 1139, 1423
XspI CTAG 9 cut(s) 524, 990, 1214, 1685, 1818, 2045, 2114, 2460, 3153
ZrmI AGTACT 4 cut(s) 208, 1218, 1995, 2773
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.