FvH4_6g21373

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000047
Physical Location & Seq
Forward (+)
14953251 .. 14956575
3325 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g21373.t1

Sequence Viewer

Length: 3270 bp
ATGAGAACTCTGTTCCTCCATTTATTCCTATTCCTAACCATTACTAGTATTACCACCCTCATTACTGCTGTTGAAAGCAACTGTATTGAAGATCAGCAACTATCACTACTCCATTATAAGAAAAGCCTTGTATATGTAATTGAGCCTCCTTCCCCCAGGCTTATTACATGGGACTCAAATATTGATTGCTGTTCTTGGCTTGGTGTAACTTGCAGCACTAATGGATATGTTATCGGACTTGACCTCAGCAACGAGTTTGTTTCATGCAACATCGACAGTTCCAGCAGTATCTTCCAACTTCAATATCTTGAGAGCCTCAATTTGGCCAATAACGTCTTCAGTGGCTCTAAAATTCCATCTGCAATTGGAAAGCTTACTAATCTGAGGCATCTAAAATTAGCCAGTGGCTATTTTACTGGGCAGATTCCCGTGGAGGTTGCACGCTTGACAAGGTTGGTTACTCTTGATCTCTCTAGAAACAATTACGATGGGGTATCGTTGAAATGTGAGAATCGAAGTTTAGGCATGCTAATTCAGAATCTCACAGAGCTTGAGGAGTTATATCTTGATGCAGTAGAGATATCTACACAGCAGAGTGACTGGTGCGAAGCCATATCATCTTCACTGCCAAATCTGATGGTGTTGAGCTTGTACAGTTGTGGTCTTTCAGGCCCTTTATGTGAGTCCCTTGCTACTATCCAATCTCTATCTGTGATTCACTTAGATAGCAACTACTTCAATTCTCCAGTTCCGAGATCCTTTGCCAATCTTTCAAACTTGACTTCCTTGAGCCTTTCTCGTTGTAACTTGTTGGGAACATTTCCGAAAGAGATCTTCCTTATTCATTCCCTTCAATCCATTGATCTTTCTAGTAATCTAGAACTTGGTGGTTCCTTTCCAGAGTTTCCAAAGAATAGGACAGAACTCTCAACCATATCTCTTTCACATTGCAAGTTCACTGGATCCCTCCCCAAGTCAATTGAAAACCTCACACAATTGGTAGACATGGACATTTCATGGAACAAGTTCAATAGTCCTATCAGTTCTATTCACTGGGAAGCCCTTGTTCATCTGGAAAGCCTTGACTTGAGCAACAATCTTTTCTATGGGAGCATTCCATCATCTATTGTTTCTCCTCCCTTGCTGGTTGCATTAGCGCTTTCCAATAATCATTTCTCTGGTCAAGTCCCTGAATTTTCCAATACACCATCGCAGTCACTTCGCAACCTTCTTTTGGGAAACAACAATTTGGAAGGAGAAATACCAACATCTATCTTTAATCTTCAAGGGCTTATGTATCTTGATATTTCTTCAAACAACCTCAGTGGCTTCCCTTTTACTGGTCCTCAGCAGCCCAGAACTCTTTCATTTCTTGACCTTTCCCACAATAACTTGTTGTTTGATTACAATGGTACAAGTACCTCCTTCCTTCAGATTGAAGTATTGTTATTGGCTTCAAACAAGTTGAGAGGATTCCCAGATTTCTTGAAGAATCAATCCACACTTTGGCGACTGGACCTTTCAAGAAACCAGATTCCAGGCCAAATACCTGATTGGATTTGGAGGCTCAATTCCCTTTTACTCCTAAATCTTTCTTCTAACTCCATTGTAACTCTAGAACCTCTTCTTCCTAATTCTACTTGTATGTTAGCAAATCTTGACCTTAGTTCTAACAAGTTGAGAACACTCCCAGACTTCTTGAGAAATCTGTCCACATTAAGTTACTTGGATCTTTCAAACAACCAAATTCAAGGCCAGATACCCAATTGGATTTGGAGGCTCAATTCTCTTAAAGAACTGAATCTTTCTCGTAACTCTTTGGAAACTCTAGAAGCTCCTTTACCTGATTCTGGCGTCACTTCTCTTGATCTTCACTCAAACCAGTTCCAGGGAAAAATCCCATTGTTCCTGCCATCTGCCCATTTTTTGGATTACTCGAGAAATAATTTTAGCTCTAGTATACCGATTGATATTGGTAGTTTCATCTCTCAAACAAATTTCTTCTCTCTATCAAGCAATAACTTGCATGGAACCATTCCAAGCTCAATCTGCATTACAACTGGTATGGTTCTTGATCTGTCCTATAATGCTTTGAGTGGCATCATTCCACAATGCTTGACTCAACTTTCACTTGCAGTCCTTGACTTAAGGACAAACAACCTTACTGGCACTATTCCTGATAATTTTCTTGAGCATTGTAAGCTACGAACTCTTGATCTCAGCGGAAATCAGATACAAGGTCAGTTTCCAAAATCTCTTGTCAACTGCTCAAGTTTAGAGATTTTAAGTCTCGGAAACAATCAGATTACAGATACATTTCCATGTTTGTTGATGACCATGTCCACATTGCGTATCCTTGTTTTGCGATCCAACAAATTTTATGGTAGCTTTGGATGTCCCAAGACCAACAACACATGGCCTATGCTGCAAATTATAGATCTTGCACACAACCATTTGAATGGTGAAATACCAGGAACTTCTTTTGCAACATGGCAGAAAATGAAGGTCAGCGAAGATGAATTCCTAGCGAACCTTGGATTTTCATACGCACCTCTGTACACAACTGAGACTATCGGGCTTGAAGTTTATTACAGAGATACAATAACAACCATCATCAAAGGTTTGCAGTTGAATCTAGTAAAGATTCTAACTATCTTCACCTTGATTGACTTCTCCTCCAACAACTTTAGCGGATCGATACCTAAGGAAATTGGAGAGATGAAAGCATTGTATGTCCTCAACTTATCTGGTAATGCTTTCACAGGTGAAATCCCATCATCTTTTGGAGACATGAGAACCATAGAGTCCTTAGACCTCTCACAGAACCGTCTAAGCGGCCACATTCCCCAACAGTTTGCAAATCTCAATTTCCTTTCGTTTTTGAATGTCTCAAATAATCAACTGGTGGGCAAAATACCAACTAGCACTCAGTTTTCAACATTTCCAAATACTTCCTTTGAAGGCAACCAAGGGTTATGGGGGCCTCCTCTGACATCGGATACACTAGCTTCATTGCCACCACCTACGTCAAATGGAAGTTCAAATAACCCGAATTCTGGAGATGAGATTGATTGGGATATTATCAGTGTTGAAATTGGATTTACATGTGGATTTGGAATGGCCATTGGATCACTTTTGTTTTGCAAAAGATGGAGGGAACGGTATTACAAAGTAATGTGCAACATTCTTTTGAAGATATTTCCTCAGCTTGAACAAAGATTTGGTAATCATAGAAGACATGTTTACATAAACACAAGGTGGAGGCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1090

Amino Acids

121.21

Weight (kDa)

5.5

Isoelectric Point (pI)

38.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 72 1.2e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 84 - 288 9.7e-12 Leucine-rich repeat region
LRR_8 PF13855 235 - 292 8.1e-06 Leucine rich repeat
LRR_8 PF13855 406 - 465 2.8e-07 Leucine rich repeat
LRR_8 PF13855 550 - 607 1.7e-09 Leucine rich repeat
LRR_8 PF13855 734 - 793 3.5e-08 Leucine rich repeat
LRR_4 PF12799 734 - 771 1.6e-07 Leucine Rich repeats (2 copies)
LRR_8 PF13855 910 - 968 2.5e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 117
AccB7I CCANNNNNTGG 2 cut(s) 1506, 1927
AccI GTMKAC 2 cut(s) 1002, 1960
AciI CCGC 3 cut(s) 2223, 2691, 2835
AclWI GGATC 7 cut(s) 750, 957, 970, 1737, 2361, 2701, 3136
AcoI YGGCCR 3 cut(s) 324, 2836, 3120
AcsI RAATTY 7 cut(s) 351, 1193, 1746, 1996, 2375, 2519, 3052
AcuI CTGAAG 2 cut(s) 322, 1415
AcyI GRCGYC 1 cut(s) 1854
AdeI CACNNNGTG 1 cut(s) 3258
AfaI GTAC 4 cut(s) 653, 1414, 1420, 2558
AfeI AGCGCT 1 cut(s) 1158
AfiI CCNNNNNNNGG 8 cut(s) 322, 1234, 1340, 1506, 1850, 1888, 1927, 3056
AflII CTTAAG 1 cut(s) 2146
AflIII ACRYGT 2 cut(s) 3104, 3238
AhlI ACTAGT 1 cut(s) 44
AjnI CCWGG 4 cut(s) 155, 1537, 1887, 2470
AjuI GAANNNNNNNTTGG 6 cut(s) 320, 352, 1157, 1189, 3204, 3236
Alw26I GTCTC 4 cut(s) 2294, 2561, 2781, 2893
AlwI GGATC 7 cut(s) 750, 957, 970, 1737, 2361, 2701, 3136
Ama87I CYCGRG 1 cut(s) 1936
Aor51HI AGCGCT 1 cut(s) 1158
AoxI GGCC 8 cut(s) 324, 670, 1540, 1753, 2417, 2836, 2981, 3120
ApeKI GCWGC 3 cut(s) 213, 1351, 2425
ApoI RAATTY 7 cut(s) 351, 1193, 1746, 1996, 2375, 2519, 3052
Asp700I GAANNNNTTC 3 cut(s) 1025, 1363, 1623
AspLEI GCGC 1 cut(s) 1159
AspS9I GGNCC 4 cut(s) 671, 1343, 1516, 2981
AsuHPI GGTGA 3 cut(s) 2474, 2650, 2777
AvaI CYCGRG 1 cut(s) 1936
AvaII GGWCC 2 cut(s) 1343, 1516
AxyI CCTNAGG 1 cut(s) 2703
BalI TGGCCA 2 cut(s) 326, 3122
BamHI GGATCC 1 cut(s) 962
BarI GAAGNNNNNNTAC 4 cut(s) 1245, 1277, 1824, 1856
BbsI GAAGAC 2 cut(s) 328, 3241
BbvCI CCTCAGC 3 cut(s) 245, 1347, 3204
BbvI GCAGC 3 cut(s) 225, 1363, 2412
BccI CCATC 9 cut(s) 364, 482, 631, 1126, 1216, 1921, 2618, 2782, 3144
BcgI CGANNNNNNTGC 2 cut(s) 1202, 1236
BciT130I CCWGG 4 cut(s) 157, 1539, 1889, 2472
BciVI GTATCC 2 cut(s) 2363, 2992
BcoDI GTCTC 4 cut(s) 2294, 2561, 2781, 2893
BcuI ACTAGT 1 cut(s) 44
BfoI RGCGCY 1 cut(s) 1160
BfrI CTTAAG 1 cut(s) 2146
BfuI GTATCC 2 cut(s) 2363, 2992
BglII AGATCT 2 cut(s) 831, 2437
BisI GCNGC 4 cut(s) 214, 1352, 2426, 2836
BlsI GCNGC 4 cut(s) 215, 1353, 2427, 2837
Bme1390I CCNGG 4 cut(s) 157, 1539, 1889, 2472
Bme18I GGWCC 2 cut(s) 1343, 1516
BmeT110I CYCGRG 1 cut(s) 1936
BmgT120I GGNCC 4 cut(s) 671, 1343, 1516, 2981
BmiI GGNNCC 4 cut(s) 892, 964, 2032, 2982
BmrFI CCNGG 4 cut(s) 157, 1539, 1889, 2472
BmrI ACTGGG 2 cut(s) 426, 1063
BmsI GCATC 3 cut(s) 397, 559, 2109
BmuI ACTGGG 2 cut(s) 426, 1063
BpiI GAAGAC 2 cut(s) 328, 3241
BplI GAGNNNNNCTC 2 cut(s) 781, 813
BpmI CTGGAG 2 cut(s) 729, 3078
Bpu10I CCTNAGC 3 cut(s) 245, 1347, 3204
BpuEI CTTGAG 7 cut(s) 329, 572, 808, 1108, 1720, 2210, 2254
Bsa29I ATCGAT 1 cut(s) 2696
BsaHI GRCGYC 1 cut(s) 1854
BsaJI CCNNGG 5 cut(s) 155, 429, 1888, 2533, 2968
BsaXI ACNNNNNCTCC 2 cut(s) 2660, 2690
Bsc4I CCNNNNNNNGG 8 cut(s) 322, 1234, 1340, 1506, 1850, 1888, 1927, 3056
Bse21I CCTNAGG 1 cut(s) 2703
Bse3DI GCAATG 3 cut(s) 946, 2345, 3011
BseBI CCWGG 4 cut(s) 157, 1539, 1889, 2472
BseCI ATCGAT 1 cut(s) 2696
BseDI CCNNGG 5 cut(s) 155, 429, 1888, 2533, 2968
BseGI GGATG 1 cut(s) 2399
BseLI CCNNNNNNNGG 8 cut(s) 322, 1234, 1340, 1506, 1850, 1888, 1927, 3056
BseMI GCAATG 3 cut(s) 946, 2345, 3011
BseMII CTCAG 8 cut(s) 259, 374, 1336, 1361, 2233, 2556, 2942, 3218
BseRI GAGGAG 4 cut(s) 569, 1125, 2665, 2976
BseXI GCAGC 3 cut(s) 225, 1363, 2412
BshFI GGCC 8 cut(s) 326, 672, 1542, 1755, 2419, 2838, 2983, 3122
BshVI ATCGAT 1 cut(s) 2696
BsiHKCI CYCGRG 1 cut(s) 1936
BslFI GGGAC 4 cut(s) 185, 670, 1172, 2382
BslI CCNNNNNNNGG 8 cut(s) 322, 1234, 1340, 1506, 1850, 1888, 1927, 3056
BsmAI GTCTC 4 cut(s) 2294, 2561, 2781, 2893
BsmFI GGGAC 4 cut(s) 185, 670, 1172, 2382
BsmI GAATGC 1 cut(s) 1113
BsnI GGCC 8 cut(s) 326, 672, 1542, 1755, 2419, 2838, 2983, 3122
BsoBI CYCGRG 1 cut(s) 1936
Bsp1407I TGTACA 2 cut(s) 651, 2556
BspACI CCGC 3 cut(s) 2223, 2691, 2835
BspANI GGCC 8 cut(s) 326, 672, 1542, 1755, 2419, 2838, 2983, 3122
BspCNI CTCAG 8 cut(s) 258, 375, 1335, 1360, 2232, 2557, 2941, 3217
BspDI ATCGAT 1 cut(s) 2696
BspLI GGNNCC 4 cut(s) 892, 964, 2032, 2982
BspPI GGATC 7 cut(s) 750, 957, 970, 1737, 2361, 2701, 3136
BspTI CTTAAG 1 cut(s) 2146
BsrDI GCAATG 3 cut(s) 946, 2345, 3011
BsrGI TGTACA 2 cut(s) 651, 2556
BssECI CCNNGG 5 cut(s) 155, 429, 1888, 2533, 2968
BssNAI GTATAC 1 cut(s) 1961
BssNI GRCGYC 1 cut(s) 1854
BssT1I CCWWGG 2 cut(s) 2533, 2968
Bst1107I GTATAC 1 cut(s) 1961
Bst2UI CCWGG 4 cut(s) 157, 1539, 1889, 2472
Bst4CI ACNGT 6 cut(s) 83, 278, 656, 2828, 2853, 3162
Bst6I CTCTTC 1 cut(s) 1629
BstACI GRCGYC 1 cut(s) 1854
BstAFI CTTAAG 1 cut(s) 2146
BstAUI TGTACA 2 cut(s) 651, 2556
BstC8I GCNNGC 2 cut(s) 442, 527
BstDSI CCRYGG 1 cut(s) 429
BstF5I GGATG 1 cut(s) 2399
BstH2I RGCGCY 1 cut(s) 1160
BstHHI GCGC 1 cut(s) 1159
BstMAI GTCTC 4 cut(s) 2294, 2561, 2781, 2893
BstMWI GCNNNNNNNGC 3 cut(s) 2049, 2200, 2425
BstNI CCWGG 4 cut(s) 157, 1539, 1889, 2472
BstNSI RCATGY 3 cut(s) 529, 3108, 3242
BstSCI CCNGG 4 cut(s) 155, 1537, 1887, 2470
BstV1I GCAGC 3 cut(s) 225, 1363, 2412
BstV2I GAAGAC 2 cut(s) 328, 3241
BstX2I RGATCY 5 cut(s) 755, 831, 962, 1729, 2437
BstXI CCANNNNNNTGG 1 cut(s) 2459
BstYI RGATCY 5 cut(s) 755, 831, 962, 1729, 2437
BstZ17I GTATAC 1 cut(s) 1961
Bsu15I ATCGAT 1 cut(s) 2696
Bsu36I CCTNAGG 1 cut(s) 2703
BsuI GTATCC 2 cut(s) 2363, 2992
BsuRI GGCC 8 cut(s) 326, 672, 1542, 1755, 2419, 2838, 2983, 3122
BsuTUI ATCGAT 1 cut(s) 2696
BtgI CCRYGG 1 cut(s) 429
BtgZI GCGATG 1 cut(s) 1194
BtsCI GGATG 1 cut(s) 2399
BtsI GCAGTG 1 cut(s) 623
BtsIMutI CAGTG 8 cut(s) 346, 409, 623, 957, 1051, 1330, 3091, 3265
Cac8I GCNNGC 2 cut(s) 442, 527
CfoI GCGC 1 cut(s) 1159
Cfr13I GGNCC 4 cut(s) 671, 1343, 1516, 2981
ClaI ATCGAT 1 cut(s) 2696
CseI GACGC 1 cut(s) 1843
Csp6I GTAC 4 cut(s) 652, 1413, 1419, 2557
CspCI CAANNNNNGTGG 4 cut(s) 1306, 1341, 2097, 2132
CviQI GTAC 4 cut(s) 652, 1413, 1419, 2557
DraIII CACNNNGTG 1 cut(s) 3258
EaeI YGGCCR 3 cut(s) 324, 2836, 3120
Eam1104I CTCTTC 1 cut(s) 1629
EarI CTCTTC 1 cut(s) 1629
Eco130I CCWWGG 2 cut(s) 2533, 2968
Eco32I GATATC 1 cut(s) 582
Eco47I GGWCC 2 cut(s) 1343, 1516
Eco47III AGCGCT 1 cut(s) 1158
Eco57I CTGAAG 2 cut(s) 322, 1415
Eco81I CCTNAGG 1 cut(s) 2703
Eco88I CYCGRG 1 cut(s) 1936
EcoO109I RGGNCCY 2 cut(s) 671, 2981
EcoRI GAATTC 2 cut(s) 2519, 3052
EcoRII CCWGG 4 cut(s) 155, 1537, 1887, 2470
EcoRV GATATC 1 cut(s) 582
EcoT14I CCWWGG 2 cut(s) 2533, 2968
ErhI CCWWGG 2 cut(s) 2533, 2968
FaqI GGGAC 4 cut(s) 185, 670, 1172, 2382
FblI GTMKAC 2 cut(s) 1002, 1960
Fnu4HI GCNGC 4 cut(s) 214, 1352, 2426, 2836
FokI GGATG 1 cut(s) 2406
Fsp4HI GCNGC 4 cut(s) 214, 1352, 2426, 2836
GlaI GCGC 1 cut(s) 1158
GluI GCNGC 4 cut(s) 214, 1352, 2426, 2836
GsuI CTGGAG 2 cut(s) 729, 3078
HaeII RGCGCY 1 cut(s) 1160
HaeIII GGCC 8 cut(s) 326, 672, 1542, 1755, 2419, 2838, 2983, 3122
HgaI GACGC 1 cut(s) 1843
HhaI GCGC 1 cut(s) 1159
Hin1I GRCGYC 1 cut(s) 1854
Hin6I GCGC 1 cut(s) 1157
HinP1I GCGC 1 cut(s) 1157
HincII GTYRAC 1 cut(s) 2263
HindII GTYRAC 1 cut(s) 2263
HindIII AAGCTT 1 cut(s) 371
HphI GGTGA 3 cut(s) 2474, 2650, 2777
Hpy166II GTNNAC 8 cut(s) 957, 1003, 1713, 1961, 2263, 2343, 2559, 3244
Hpy8I GTNNAC 8 cut(s) 957, 1003, 1713, 1961, 2263, 2343, 2559, 3244
HpyAV CCTTC 8 cut(s) 159, 860, 1238, 1247, 1435, 1439, 2497, 2954
HpyCH4III ACNGT 6 cut(s) 83, 278, 656, 2828, 2853, 3162
HpyCH4IV ACGT 2 cut(s) 333, 3026
HpyF10VI GCNNNNNNNGC 3 cut(s) 2049, 2200, 2425
HpySE526I ACGT 2 cut(s) 333, 3026
Hsp92I GRCGYC 1 cut(s) 1854
HspAI GCGC 1 cut(s) 1157
LmnI GCTCC 2 cut(s) 1110, 1840
Lsp1109I GCAGC 3 cut(s) 225, 1363, 2412
LweI GCATC 3 cut(s) 397, 559, 2109
MaeII ACGT 2 cut(s) 333, 3026
MaeIII GTNAC 9 cut(s) 205, 457, 596, 803, 1215, 1609, 1721, 1811, 1855
MfeI CAATTG 4 cut(s) 363, 978, 995, 1765
MflI RGATCY 5 cut(s) 755, 831, 962, 1729, 2437
MlsI TGGCCA 2 cut(s) 326, 3122
MluNI TGGCCA 2 cut(s) 326, 3122
MlyI GAGTC 4 cut(s) 167, 692, 2113, 2813
MmeI TCCRAC 3 cut(s) 319, 2394, 2703
Mox20I TGGCCA 2 cut(s) 326, 3122
MroXI GAANNNNTTC 3 cut(s) 1025, 1363, 1623
MscI TGGCCA 2 cut(s) 326, 3122
MseI TTAA 5 cut(s) 1278, 1718, 1791, 2147, 2285
MslI CAYNNNNRTG 2 cut(s) 2320, 2457
Msp20I TGGCCA 2 cut(s) 326, 3122
MspA1I CMGCKG 1 cut(s) 2223
MspCI CTTAAG 1 cut(s) 2146
MspR9I CCNGG 4 cut(s) 157, 1539, 1889, 2472
MunI CAATTG 4 cut(s) 363, 978, 995, 1765
Mva1269I GAATGC 1 cut(s) 1113
MvaI CCWGG 4 cut(s) 157, 1539, 1889, 2472
MwoI GCNNNNNNNGC 3 cut(s) 2049, 2200, 2425
NlaIV GGNNCC 4 cut(s) 892, 964, 2032, 2982
NmuCI GTSAC 3 cut(s) 596, 1215, 1855
NspI RCATGY 3 cut(s) 529, 3108, 3242
PaeI GCATGC 1 cut(s) 529
PaeR7I CTCGAG 1 cut(s) 1936
PciI ACATGT 2 cut(s) 3104, 3238
PctI GAATGC 1 cut(s) 1113
PdmI GAANNNNTTC 3 cut(s) 1025, 1363, 1623
PflFI GACNNNGTC 1 cut(s) 2338
PflMI CCANNNNNTGG 2 cut(s) 1506, 1927
PkrI GCNGC 4 cut(s) 215, 1353, 2427, 2837
PleI GAGTC 4 cut(s) 167, 691, 2113, 2812
PpsI GAGTC 4 cut(s) 167, 691, 2113, 2812
PscI ACATGT 2 cut(s) 3104, 3238
PsiI TTATAA 1 cut(s) 117
Psp6I CCWGG 4 cut(s) 155, 1537, 1887, 2470
PspGI CCWGG 4 cut(s) 155, 1537, 1887, 2470
PspN4I GGNNCC 4 cut(s) 892, 964, 2032, 2982
PspPI GGNCC 4 cut(s) 671, 1343, 1516, 2981
PsuI RGATCY 5 cut(s) 755, 831, 962, 1729, 2437
PsyI GACNNNGTC 1 cut(s) 2338
RsaI GTAC 4 cut(s) 653, 1414, 1420, 2558
RsaNI GTAC 4 cut(s) 652, 1413, 1419, 2557
RseI CAYNNNNRTG 2 cut(s) 2320, 2457
SaqAI TTAA 5 cut(s) 1278, 1718, 1791, 2147, 2285
SatI GCNGC 4 cut(s) 214, 1352, 2426, 2836
Sau96I GGNCC 4 cut(s) 671, 1343, 1516, 2981
SchI GAGTC 4 cut(s) 167, 692, 2113, 2813
ScrFI CCNGG 4 cut(s) 157, 1539, 1889, 2472
SfaNI GCATC 3 cut(s) 397, 559, 2109
Sfr274I CTCGAG 1 cut(s) 1936
SinI GGWCC 2 cut(s) 1343, 1516
SlaI CTCGAG 1 cut(s) 1936
SmiMI CAYNNNNRTG 2 cut(s) 2320, 2457
SmlI CTYRAG 9 cut(s) 308, 551, 787, 1087, 1699, 1936, 2146, 2189, 2269
SmoI CTYRAG 9 cut(s) 308, 551, 787, 1087, 1699, 1936, 2146, 2189, 2269
SpeI ACTAGT 1 cut(s) 44
SphI GCATGC 1 cut(s) 529
SsiI CCGC 3 cut(s) 2223, 2691, 2835
SspI AATATT 1 cut(s) 181
StyD4I CCNGG 4 cut(s) 155, 1537, 1887, 2470
StyI CCWWGG 2 cut(s) 2533, 2968
TaaI ACNGT 6 cut(s) 83, 278, 656, 2828, 2853, 3162
TaiI ACGT 2 cut(s) 336, 3029
TaqI TCGA 4 cut(s) 273, 514, 1937, 2696
TatI WGTACW 2 cut(s) 651, 2556
TauI GCSGC 1 cut(s) 2838
Tru1I TTAA 5 cut(s) 1278, 1718, 1791, 2147, 2285
Tru9I TTAA 5 cut(s) 1278, 1718, 1791, 2147, 2285
TscAI CASTG 7 cut(s) 346, 409, 630, 964, 1058, 1330, 3091
TseFI GTSAC 3 cut(s) 596, 1215, 1855
TseI GCWGC 3 cut(s) 213, 1351, 2425
Tsp45I GTSAC 3 cut(s) 596, 1215, 1855
TspRI CASTG 7 cut(s) 346, 409, 630, 964, 1058, 1330, 3091
Tth111I GACNNNGTC 1 cut(s) 2338
Van91I CCANNNNNTGG 2 cut(s) 1506, 1927
Vha464I CTTAAG 1 cut(s) 2146
VpaK11BI GGWCC 2 cut(s) 1343, 1516
XapI RAATTY 7 cut(s) 351, 1193, 1746, 1996, 2375, 2519, 3052
XbaI TCTAGA 4 cut(s) 473, 877, 1615, 1828
XceI RCATGY 3 cut(s) 529, 3108, 3242
XhoI CTCGAG 1 cut(s) 1936
XmiI GTMKAC 2 cut(s) 1002, 1960
XmnI GAANNNNTTC 3 cut(s) 1025, 1363, 1623
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.