FvH4_6g10800

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000047
Physical Location & Seq
Forward (+)
6475298 .. 6479166
3869 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g10800.t1

Sequence Viewer

Length: 3171 bp
ATGAAAACTGATCAGTTTTATTTCTTCCTTTTCTTTGTCTCGCTCTGTGTTAGTATCATCATCAACCCTGTAGTCCATAGCAAGTGTATACCAGACCAGCAACAATCATTGCTCCATTTCAAGAGCAACCTCTTATTTAATGCCTCTCTTTCCACCAAGCTTATTACCTGGAACTCAAGTACCGATTGTTGTTCTTGGGTCGGCGTTATTTGCAGCACCAATGGCCGTGTCATGGGTGTTGACATCAGCAGTGAATCTATCTCAGGTGGTATTGACAATTCTAGCAGTCTCTTCCATCTTCAAAATCTTCAAAACCTCAATTTGGCATACAACTACCTTGGCGACGGCTCATCAATTCCATCAGCATTCGGGAAGCTCGTGAACTTGAGGTATCTGAATTTATCTCACAATTATTATTCAGGGAAAATTCCCATTGAGATTTCACGCTTGACGAGGTTGGTAGTTCTTGATATTTCTAAATGGTCTTCCTTCCTTGAGGGGGGTCCCCTTGAGATCCCAACTTTACACATGCTAGTCGAGAACCTCACAAAGCTTAGTGAGTTGTATCTTGATTCTGTCCAAATATCAGCAGGGGGGAGTGGGTGGTGCCAAGCCATATCATCTTCCCTTCCCAACCTTAGGGTGTTGAGCTTGTCCGATTGTAATCTTTCTGGCCCTTTCCACCATTCTCTTTCTAGGCTTCAATCCCTCTCTGTGATTCAATTGGACTCGAACAACATCTCCACTCCAGTTCCAACATTCTTTGCCAACTTTTCAAACTTGACATTCCTGAGTCTCAAATTTTGTAATCTGCAAGGAACATTTCCGAAAGAAATCTTTCAGTTACCTTCTCTCCGTAAGATTAGCCTTACCGAAAATGGAGACCTTGATGGTTCCTTGCCAGAATTTCCAACAAATGGATCTCTTCAGGACCTGGATCTATGGGGTACTAATTTTTCAGGGGTATTACCAAACTCTATTGGCAACCTCAAGATGTTGTCCACAATTAATATCGGAGCCTGTAATTTCACAGGATCAATCCCCAAGTCGATGGCAAACCTTACGCAATTGGTTTTCTTGCGGATGGATGGAAACAAGTTTGAAGGTTCAATTCCGTCATTCAGCGGGGCCAAGAATCTAGAGTACATAGACCTCTATTCAAATGGTCTAACAGGTAATATTAATTGCATCCCCTGGAAAAACTTTTCTAACCTATACTATCTCGACTTAAGTGAAAATATGCTCAATGGGAATATTCCATCAGCTATGTTTTCTCTTCCCTCGCTAGAGACTCTATATCTTTATGATAACCAATTCTCTGGTCATTTTCCTGAAATTTCTAATATCTCATCATACTTTCTCAAAAATATTCATTTGAGTATGAATAATCTGGAAGGGCCAATACCCATGTCTATCTTTGACTGTCAGGGTCTTGAACTTCTTGATCTTTCTTCAAACAATTTCAGTGGCTCATTTCTTCTAGATAGTCTTCAGCATCTCAGAAATCTTTATTCTCTTTATCTTTCACACAATAGCTTGTCTCTTAGCCATGATGCTACCAATTACTCACGCTCCTATTTTCCTCAATTTCAATTCTTGGGGTTGGCTTCAGGAAAGTTAAGAACATTCCCTCATTTCTTGAGAAATCAATCTCAATTGGTGAATTTGGTTCTTTCCGATAACCAAATACAGGGCAATATACCCAACTGGATTTGGAGGTTCAGGGATCTCACGTACCTAAATCTTTCATGTAACTCTCTAGAAACTCTAGAAGGTACAATCAATCTCACTTCTCTAGATACCCTTGACCTTCATTCTAACCAGCTCCATGGGAAAATCCCAATTTCATTGTCACCTAACATGAATTATCTAGATTACTCTAGGAATAACTTCAACTCTACCATACCGACTGCCATTGAAGATCTGGTTCCTAACGCTCGATTCTTCTCTATTGCAAGCAACAACCTTCAAGGGATCATTCCAAGATCAATATGCAATTCACATAAACTTGAGATTCTTGATATGTCCAATAATTCCTTGAGTGGAACGGTTCCTCACTGCTTGACTACAATGAGCACCCTTTCAGTACTGAATCTAAGGAGAAACAATCTTAGAAATGTAGCCAAGTTGTCTGTCAATTGCGGTTTGCAAACGCTAGACATTAGTGATAATCAAATACAAGGTCAGTTGCCAAAATCACTCGTCAGCTGTCAACAGTTACAAGTTCTAAACGTTGGAAATAATCAAATAACAGGTCCATTTCCATGCTTTATTAAGATCATATCTACCTTGCGTGTCATAGTCTTGCGATCCAATAAGTTTTATGGAGGCGTTGGATGTCCCAAGACTGATGGCACTTGGCCAATGCTTCAAATTATAGACCTAGCTCACAACAATTTTAGTGGAAAAGTACCAGGGAGAGCTTTGACAACTTGGCTAGCAATGATGGCTAATGAAGATGATGCCTCATCAAAGCTCAAGTACCTTCAATTTCAACACAATGGAACTGGTAGGATTTATTATCAAGATACAATTACTGTTACCAACAAAGGTCAAGAGATGGAGTTGGAAAAAATACTTACAATCTTCACCTCTATAGACTTCTCAAACAACAGGTTCACTGGATCTATACCTGATGAAATTGGAGAACTCAAATCACTACATGTCCTCGACTTCTCAAACAATGATTTCAGAGGTGCAATTCCATCATCATTAAGCAACTTGAGTCAGCTAGAATCGTTAGACCTCTCACATAACACATTGAGTGGTCAAATTCCACTACAGCTTACAAAACTCACTTTCCTTTCATTCTTGAATCTCTCAAACAATCAACTCGAGGGCAGAATTCCGAGCAGTAATCAATTTTCAACATTTCCAAAATCTTCCTTTGAAGGAAACAAAGGTTTGTTCGGGCCTCCCTTGACTGAAGAAAACAAAACAAGGTTGTCACCTTCGGAACCTGAAAAAAATCATCCAAATTCTGGAGATGAGATTGATTGGAATGTCATCAGTGTTGAGATTGGATTCACATGTGGGTTGGGAATTGCCATCGGATCACTTTTGTTTTGCAAGAGATGGAGGATATGGTATTACAAAACTATGTATAGAATTCTTGTGAGGATTAAGAAAACTTCTCTGAAGCAGCTCAATCTGTTCCAGAGGGAATGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1057

Amino Acids

117.88

Weight (kDa)

6.52

Isoelectric Point (pI)

37.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 72 2.2e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 91 - 192 3e-06 Leucine-rich repeat region
LRR_8 PF13855 211 - 271 5.4e-06 Leucine rich repeat
LRR_14 PF23598 309 - 372 9.4e-07 Leucine-rich repeat region
LRR_14 PF23598 371 - 614 5.8e-07 Leucine-rich repeat region
LRR_8 PF13855 552 - 609 1.4e-06 Leucine rich repeat
LRR_8 PF13855 650 - 704 3.5e-06 Leucine rich repeat
LRR_14 PF23598 875 - 942 4.2e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 606
AccB7I CCANNNNNTGG 2 cut(s) 917, 2981
AccI GTMKAC 1 cut(s) 88
AciI CCGC 3 cut(s) 1081, 1125, 2142
AclI AACGTT 1 cut(s) 2232
AclWI GGATC 9 cut(s) 508, 928, 945, 1042, 1734, 1982, 2304, 2632, 3061
AcoI YGGCCR 2 cut(s) 223, 2360
AcuI CTGAAG 5 cut(s) 911, 1475, 1593, 2946, 3158
AfaI GTAC 8 cut(s) 181, 949, 1145, 1736, 1777, 2088, 2412, 2483
AfiI CCNNNNNNNGG 7 cut(s) 232, 322, 499, 639, 917, 1690, 2981
AflII CTTAAG 1 cut(s) 1228
AflIII ACRYGT 2 cut(s) 2662, 3029
AjnI CCWGG 4 cut(s) 167, 933, 1193, 2413
AloI GAACNNNNNNTCC 2 cut(s) 725, 757
Alw21I GWGCWC 1 cut(s) 2078
Alw26I GTCTC 6 cut(s) 43, 293, 800, 876, 1283, 1545
AlwI GGATC 9 cut(s) 508, 928, 945, 1042, 1734, 1982, 2304, 2632, 3061
AlwNI CAGNNNCTG 1 cut(s) 934
Ama87I CYCGRG 1 cut(s) 2834
AoxI GGCC 6 cut(s) 223, 673, 1128, 1397, 2360, 2912
ApeKI GCWGC 2 cut(s) 213, 3142
ArsI GACNNNNNNTTYG 4 cut(s) 2167, 2199, 2239, 2271
AseI ATTAAT 2 cut(s) 1008, 1182
Asp700I GAANNNNTTC 2 cut(s) 837, 1889
AspS9I GGNCC 7 cut(s) 503, 674, 931, 1128, 1397, 2255, 2912
AsuHPI GGTGA 4 cut(s) 1672, 1845, 2581, 2940
AsuNHI GCTAGC 1 cut(s) 2437
AvaI CYCGRG 1 cut(s) 2834
AvaII GGWCC 3 cut(s) 503, 931, 2255
AxyI CCTNAGG 1 cut(s) 638
BaeI ACNNNNGTAYC 2 cut(s) 163, 196
BalI TGGCCA 1 cut(s) 2362
BanI GGYRCC 1 cut(s) 606
BarI GAAGNNNNNNTAC 2 cut(s) 1386, 1418
BauI CACGAG 1 cut(s) 377
BbsI GAAGAC 2 cut(s) 477, 1481
Bbv12I GWGCWC 1 cut(s) 2078
BbvI GCAGC 2 cut(s) 225, 3154
BceAI ACGGC 2 cut(s) 210, 361
BciT130I CCWGG 4 cut(s) 169, 935, 1195, 2415
BclI TGATCA 1 cut(s) 10
BcoDI GTCTC 6 cut(s) 43, 293, 800, 876, 1283, 1545
BfmI CTRYAG 3 cut(s) 69, 2595, 2780
BfrI CTTAAG 1 cut(s) 1228
BglII AGATCT 1 cut(s) 1921
BisI GCNGC 2 cut(s) 214, 3143
BlsI GCNGC 2 cut(s) 215, 3144
BmcAI AGTACT 1 cut(s) 2088
Bme1390I CCNGG 4 cut(s) 169, 935, 1195, 2415
Bme18I GGWCC 3 cut(s) 503, 931, 2255
BmeT110I CYCGRG 1 cut(s) 2834
BmgT120I GGNCC 7 cut(s) 503, 674, 931, 1128, 1397, 2255, 2912
BmiI GGNNCC 9 cut(s) 504, 505, 608, 895, 1018, 1129, 1929, 2052, 2958
BmrFI CCNGG 4 cut(s) 169, 935, 1195, 2415
BmsI GCATC 4 cut(s) 1197, 1504, 1543, 2452
BmtI GCTAGC 1 cut(s) 2441
BpiI GAAGAC 2 cut(s) 477, 1481
BpmI CTGGAG 2 cut(s) 732, 3003
BsaAI YACGTR 1 cut(s) 1734
BsaBI GATNNNNATC 1 cut(s) 663
BsaI GGTCTC 1 cut(s) 876
BsaJI CCNNGG 4 cut(s) 337, 1193, 1828, 2414
BsaXI ACNNNNNCTCC 6 cut(s) 725, 755, 837, 867, 1556, 1586
Bsc4I CCNNNNNNNGG 7 cut(s) 232, 322, 499, 639, 917, 1690, 2981
Bse1I ACTGG 4 cut(s) 749, 1712, 2512, 2626
Bse21I CCTNAGG 1 cut(s) 638
Bse3DI GCAATG 2 cut(s) 107, 2448
Bse8I GATNNNNATC 1 cut(s) 663
BseBI CCWGG 4 cut(s) 169, 935, 1195, 2415
BseDI CCNNGG 4 cut(s) 337, 1193, 1828, 2414
BseGI GGATG 5 cut(s) 1089, 1093, 1188, 2342, 2971
BseJI GATNNNNATC 1 cut(s) 663
BseLI CCNNNNNNNGG 7 cut(s) 232, 322, 499, 639, 917, 1690, 2981
BseMI GCAATG 2 cut(s) 107, 2448
BseMII CTCAG 3 cut(s) 276, 782, 1513
BseNI ACTGG 4 cut(s) 749, 1712, 2512, 2626
BseXI GCAGC 2 cut(s) 225, 3154
BshFI GGCC 6 cut(s) 225, 675, 1130, 1399, 2362, 2914
BshNI GGYRCC 1 cut(s) 606
BsiHKAI GWGCWC 1 cut(s) 2078
BsiHKCI CYCGRG 1 cut(s) 2834
BslFI GGGAC 2 cut(s) 489, 2325
BslI CCNNNNNNNGG 7 cut(s) 232, 322, 499, 639, 917, 1690, 2981
BsmAI GTCTC 6 cut(s) 43, 293, 800, 876, 1283, 1545
BsmFI GGGAC 2 cut(s) 489, 2325
BsmI GAATGC 1 cut(s) 365
BsnI GGCC 6 cut(s) 225, 675, 1130, 1399, 2362, 2914
Bso31I GGTCTC 1 cut(s) 876
BsoBI CYCGRG 1 cut(s) 2834
Bsp1286I GDGCHC 1 cut(s) 2078
Bsp19I CCATGG 1 cut(s) 1828
BspACI CCGC 3 cut(s) 1081, 1125, 2142
BspANI GGCC 6 cut(s) 225, 675, 1130, 1399, 2362, 2914
BspCNI CTCAG 3 cut(s) 275, 783, 1512
BspLI GGNNCC 9 cut(s) 504, 505, 608, 895, 1018, 1129, 1929, 2052, 2958
BspOI GCTAGC 1 cut(s) 2441
BspPI GGATC 9 cut(s) 508, 928, 945, 1042, 1734, 1982, 2304, 2632, 3061
BspT107I GGYRCC 1 cut(s) 606
BspTI CTTAAG 1 cut(s) 1228
BspTNI GGTCTC 1 cut(s) 876
BsrDI GCAATG 2 cut(s) 107, 2448
BsrI ACTGG 4 cut(s) 749, 1712, 2512, 2626
BssECI CCNNGG 4 cut(s) 337, 1193, 1828, 2414
BssNAI GTATAC 1 cut(s) 89
BssSI CACGAG 1 cut(s) 377
BssT1I CCWWGG 2 cut(s) 337, 1828
Bst1107I GTATAC 1 cut(s) 89
Bst2BI CACGAG 1 cut(s) 377
Bst2UI CCWGG 4 cut(s) 169, 935, 1195, 2415
Bst4CI ACNGT 4 cut(s) 1424, 2050, 2217, 2539
Bst6I CTCTTC 3 cut(s) 296, 930, 1281
BstAFI CTTAAG 1 cut(s) 1228
BstBAI YACGTR 1 cut(s) 1734
BstC8I GCNNGC 2 cut(s) 1957, 2439
BstDEI CTNAG 8 cut(s) 262, 554, 638, 791, 1499, 1544, 2096, 2111
BstDSI CCRYGG 1 cut(s) 1828
BstF5I GGATG 5 cut(s) 1089, 1093, 1188, 2342, 2971
BstMAI GTCTC 6 cut(s) 43, 293, 800, 876, 1283, 1545
BstMWI GCNNNNNNNGC 3 cut(s) 210, 222, 2447
BstNI CCWGG 4 cut(s) 169, 935, 1195, 2415
BstNSI RCATGY 3 cut(s) 532, 2666, 3033
BstSCI CCNGG 4 cut(s) 167, 933, 1193, 2413
BstSFI CTRYAG 3 cut(s) 69, 2595, 2780
BstV1I GCAGC 2 cut(s) 225, 3154
BstV2I GAAGAC 2 cut(s) 477, 1481
BstX2I RGATCY 6 cut(s) 513, 920, 937, 1726, 1921, 2624
BstXI CCANNNNNNTGG 3 cut(s) 1051, 1319, 1829
BstYI RGATCY 6 cut(s) 513, 920, 937, 1726, 1921, 2624
BstZ17I GTATAC 1 cut(s) 89
Bsu36I CCTNAGG 1 cut(s) 638
BsuRI GGCC 6 cut(s) 225, 675, 1130, 1399, 2362, 2914
BtgI CCRYGG 1 cut(s) 1828
BtsCI GGATG 5 cut(s) 1089, 1093, 1188, 2342, 2971
BtsI GCAGTG 2 cut(s) 256, 2056
BtsIMutI CAGTG 5 cut(s) 256, 1471, 2056, 2619, 3016
Cac8I GCNNGC 2 cut(s) 1957, 2439
CaiI CAGNNNCTG 1 cut(s) 934
Cfr13I GGNCC 7 cut(s) 503, 674, 931, 1128, 1397, 2255, 2912
Csp6I GTAC 8 cut(s) 180, 948, 1144, 1735, 1776, 2087, 2411, 2482
CspCI CAANNNNNGTGG 4 cut(s) 1447, 1482, 2383, 2418
CviQI GTAC 8 cut(s) 180, 948, 1144, 1735, 1776, 2087, 2411, 2482
DdeI CTNAG 8 cut(s) 262, 554, 638, 791, 1499, 1544, 2096, 2111
EaeI YGGCCR 2 cut(s) 223, 2360
Eam1104I CTCTTC 3 cut(s) 296, 930, 1281
EarI CTCTTC 3 cut(s) 296, 930, 1281
Eco130I CCWWGG 2 cut(s) 337, 1828
Eco31I GGTCTC 1 cut(s) 876
Eco47I GGWCC 3 cut(s) 503, 931, 2255
Eco57I CTGAAG 5 cut(s) 911, 1475, 1593, 2946, 3158
Eco81I CCTNAGG 1 cut(s) 638
Eco88I CYCGRG 1 cut(s) 2834
EcoO109I RGGNCCY 2 cut(s) 503, 931
EcoRI GAATTC 2 cut(s) 2844, 3108
EcoRII CCWGG 4 cut(s) 167, 933, 1193, 2413
EcoT14I CCWWGG 2 cut(s) 337, 1828
ErhI CCWWGG 2 cut(s) 337, 1828
FaqI GGGAC 2 cut(s) 489, 2325
FauI CCCGC 1 cut(s) 1118
FbaI TGATCA 1 cut(s) 10
FblI GTMKAC 1 cut(s) 88
Fnu4HI GCNGC 2 cut(s) 214, 3143
FokI GGATG 5 cut(s) 1096, 1100, 1175, 2349, 2958
Fsp4HI GCNGC 2 cut(s) 214, 3143
GluI GCNGC 2 cut(s) 214, 3143
GsuI CTGGAG 2 cut(s) 732, 3003
HaeIII GGCC 6 cut(s) 225, 675, 1130, 1399, 2362, 2914
HincII GTYRAC 2 cut(s) 241, 2213
HindII GTYRAC 2 cut(s) 241, 2213
HindIII AAGCTT 2 cut(s) 158, 551
HphI GGTGA 4 cut(s) 1672, 1845, 2581, 2940
Hpy166II GTNNAC 6 cut(s) 89, 241, 382, 1002, 2213, 2619
Hpy8I GTNNAC 6 cut(s) 89, 241, 382, 1002, 2213, 2619
Hpy99I CGWCG 1 cut(s) 347
HpyCH4III ACNGT 4 cut(s) 1424, 2050, 2217, 2539
HpyCH4IV ACGT 2 cut(s) 1733, 2232
HpyCH4V TGCA 8 cut(s) 213, 814, 1188, 1955, 1995, 2149, 2699, 3069
HpyF10VI GCNNNNNNNGC 3 cut(s) 210, 222, 2447
HpyF3I CTNAG 8 cut(s) 262, 554, 638, 791, 1499, 1544, 2096, 2111
HpySE526I ACGT 2 cut(s) 1733, 2232
KflI GGGWCCC 1 cut(s) 503
Ksp22I TGATCA 1 cut(s) 10
LmnI GCTCC 4 cut(s) 117, 1016, 1577, 1830
Lsp1109I GCAGC 2 cut(s) 225, 3154
LweI GCATC 4 cut(s) 1197, 1504, 1543, 2452
MaeII ACGT 2 cut(s) 1733, 2232
MaeIII GTNAC 6 cut(s) 843, 1751, 1851, 2217, 2539, 2946
MfeI CAATTG 4 cut(s) 722, 1067, 1655, 2137
MflI RGATCY 6 cut(s) 513, 920, 937, 1726, 1921, 2624
MhlI GDGCHC 1 cut(s) 2078
MlsI TGGCCA 1 cut(s) 2362
MluNI TGGCCA 1 cut(s) 2362
MlyI GAGTC 4 cut(s) 722, 802, 1285, 2734
MmeI TCCRAC 5 cut(s) 779, 935, 2215, 2314, 2547
Mox20I TGGCCA 1 cut(s) 2362
MroXI GAANNNNTTC 2 cut(s) 837, 1889
MscI TGGCCA 1 cut(s) 2362
MseI TTAA 8 cut(s) 138, 1008, 1182, 1229, 1619, 2274, 2714, 3123
MslI CAYNNNNRTG 1 cut(s) 2263
Msp20I TGGCCA 1 cut(s) 2362
MspA1I CMGCKG 2 cut(s) 1125, 2208
MspCI CTTAAG 1 cut(s) 1228
MspR9I CCNGG 4 cut(s) 169, 935, 1195, 2415
MunI CAATTG 4 cut(s) 722, 1067, 1655, 2137
Mva1269I GAATGC 1 cut(s) 365
MvaI CCWGG 4 cut(s) 169, 935, 1195, 2415
MwoI GCNNNNNNNGC 3 cut(s) 210, 222, 2447
NcoI CCATGG 1 cut(s) 1828
NheI GCTAGC 1 cut(s) 2437
NlaIV GGNNCC 9 cut(s) 504, 505, 608, 895, 1018, 1129, 1929, 2052, 2958
NmuCI GTSAC 2 cut(s) 1851, 2946
NspI RCATGY 3 cut(s) 532, 2666, 3033
PaeR7I CTCGAG 1 cut(s) 2834
PciI ACATGT 2 cut(s) 2662, 3029
PcsI WCGNNNNNNNCGW 1 cut(s) 375
PctI GAATGC 1 cut(s) 365
PdmI GAANNNNTTC 2 cut(s) 837, 1889
PflMI CCANNNNNTGG 2 cut(s) 917, 2981
PkrI GCNGC 2 cut(s) 215, 3144
PleI GAGTC 4 cut(s) 722, 801, 1285, 2733
PpsI GAGTC 4 cut(s) 722, 801, 1285, 2733
Ppu21I YACGTR 1 cut(s) 1734
PpuMI RGGWCCY 2 cut(s) 503, 931
PscI ACATGT 2 cut(s) 2662, 3029
PshBI ATTAAT 2 cut(s) 1008, 1182
Psp1406I AACGTT 1 cut(s) 2232
Psp5II RGGWCCY 2 cut(s) 503, 931
Psp6I CCWGG 4 cut(s) 167, 933, 1193, 2413
PspGI CCWGG 4 cut(s) 167, 933, 1193, 2413
PspN4I GGNNCC 9 cut(s) 504, 505, 608, 895, 1018, 1129, 1929, 2052, 2958
PspPI GGNCC 7 cut(s) 503, 674, 931, 1128, 1397, 2255, 2912
PspPPI RGGWCCY 2 cut(s) 503, 931
PspXI VCTCGAGB 1 cut(s) 2834
PstNI CAGNNNCTG 1 cut(s) 934
PsuI RGATCY 6 cut(s) 513, 920, 937, 1726, 1921, 2624
PvuII CAGCTG 1 cut(s) 2208
RsaI GTAC 8 cut(s) 181, 949, 1145, 1736, 1777, 2088, 2412, 2483
RsaNI GTAC 8 cut(s) 180, 948, 1144, 1735, 1776, 2087, 2411, 2482
RseI CAYNNNNRTG 1 cut(s) 2263
SaqAI TTAA 8 cut(s) 138, 1008, 1182, 1229, 1619, 2274, 2714, 3123
SatI GCNGC 2 cut(s) 214, 3143
Sau96I GGNCC 7 cut(s) 503, 674, 931, 1128, 1397, 2255, 2912
ScaI AGTACT 1 cut(s) 2088
SchI GAGTC 4 cut(s) 722, 802, 1285, 2734
ScrFI CCNGG 4 cut(s) 169, 935, 1195, 2415
SduI GDGCHC 1 cut(s) 2078
SfaNI GCATC 4 cut(s) 1197, 1504, 1543, 2452
SfcI CTRYAG 3 cut(s) 69, 2595, 2780
Sfr274I CTCGAG 1 cut(s) 2834
SinI GGWCC 3 cut(s) 503, 931, 2255
SlaI CTCGAG 1 cut(s) 2834
SmiMI CAYNNNNRTG 1 cut(s) 2263
SsiI CCGC 3 cut(s) 1081, 1125, 2142
SspI AATATT 3 cut(s) 1180, 1255, 1369
StyD4I CCNGG 4 cut(s) 167, 933, 1193, 2413
StyI CCWWGG 2 cut(s) 337, 1828
TaaI ACNGT 4 cut(s) 1424, 2050, 2217, 2539
TaiI ACGT 2 cut(s) 1736, 2235
TaqI TCGA 7 cut(s) 537, 731, 1049, 1224, 1939, 2670, 2835
TatI WGTACW 2 cut(s) 1143, 2086
Tru1I TTAA 8 cut(s) 138, 1008, 1182, 1229, 1619, 2274, 2714, 3123
Tru9I TTAA 8 cut(s) 138, 1008, 1182, 1229, 1619, 2274, 2714, 3123
TscAI CASTG 5 cut(s) 256, 1471, 2063, 2626, 3016
TseFI GTSAC 2 cut(s) 1851, 2946
TseI GCWGC 2 cut(s) 213, 3142
Tsp45I GTSAC 2 cut(s) 1851, 2946
TspGWI ACGGA 2 cut(s) 845, 1104
TspRI CASTG 5 cut(s) 256, 1471, 2063, 2626, 3016
Van91I CCANNNNNTGG 2 cut(s) 917, 2981
Vha464I CTTAAG 1 cut(s) 1228
VpaK11BI GGWCC 3 cut(s) 503, 931, 2255
VspI ATTAAT 2 cut(s) 1008, 1182
XbaI TCTAGA 6 cut(s) 1138, 1480, 1759, 1768, 1795, 1870
XceI RCATGY 3 cut(s) 532, 2666, 3033
XcmI CCANNNNNNNNNTGG 1 cut(s) 1921
XhoI CTCGAG 1 cut(s) 2834
XmiI GTMKAC 1 cut(s) 88
XmnI GAANNNNTTC 2 cut(s) 837, 1889
ZrmI AGTACT 1 cut(s) 2088
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.