Prupe.6G288800_v2.0.a1

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000047
Physical Location & Seq
Reverse (-)
26697991 .. 26701123
3133 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G288800.1

Sequence Viewer

Length: 2607 bp
CATGGCCAATGTATTGAAGGCCAGAAGTCATCATTGCTCCAGTTGAAAAAAAGCCTTATATTTGATTCTTCTGCTTCCTCCAAACTTATATCATGGAATTCAAGTACCGACTGCTGTTCTTGGGTTGGTGTTACTTGCACCAGTGGGCGTGTTGTTGGTCTTGACATTAGCAGTGAATCTGTCTCAGGTGGAATTGACAATTCAAGCAGTCTCTTTGATCTTCAACATCTTCAAAGTCTCAATTTGGCCTATAATGGATTAGGCTATGGCTCTCAAATTCCATCAGCAAACCCAAATTTGAGTTTGCTCATTCGGAACCTTTTGGAGCTTACTGAACTTCATCTTGATGGTGTAAGCATATCAGCGCAGGGGACTGACTGGTGCCAAGCAATATCGTCTTCACTGCCAAAGTTGAGGGTCTTGAGCTTGATCAATTGTAACCTATCAGGCCCTTTTGATATTTCATTACTGAAGCTTCATTCACTCTCAGTCATTCGTTTAGATTACAACGAATTGTCTATTGAAGTTCCAGAGTTCTTGTCAAAATTCCGAAATTTGACTTCCTTGCACCTTAGTGAATGTGGGTTACATGGCTCATTCCCAAAGCAGATCTTCCAAATTCCTACATTACAGACTATCGACCTATCTTTTAATCCACAGCTCCAAGGCTCCTTACCAGAATTTCCCAAGAATGGATCTCTTCGTTCTTTGGTTCTAAACAACGCAAACTTTACAGGGCTTCTTCCAAACTCTATCGGCGAACTCAAAATGTTGTACAATATAGATATTTCAAGTTGCAATTTCACTGGATCAATACCAAGATCAATGGAAGGCCTTACACAATTGAGTTATGTGGACTTGTCGTCAAACAAGTTCAATGGTTCTGTTCCCATCTCTCTTTTGGAGACCCTTTATTTGAAAAGAAACAAGTTGGAAGGGCCTATCCCAATGAATATCTTTAATCTCCCAAGGCTTAGGACGCTTCAACTTTCTTCAAACAACTTGAACAACTCCTTCTCTCTTAATGTTATTCAGCAATCGAAAAATCTTTTTTTTCTTGATCTTTCCCACAACAGCTTATTAGCTTCTTGCAAGTTGAGAAGATTCCCAGGTTTCTTGAGAAATCAATCCGAATTATACAATTTGGACCTTTCACAAAACCAGATTCATGGGGAGATACCCAACTGGATTTGGAGGCTTGGTTATCTTGCTATGCTAAATCTTTCTTGCAACTCTCTGGTAACTCTAGAGGGTCCTTTCCTCAATCTGACTTCTAACTTGCTTCTACTTGACCTTCATTCCAACCAGCTTCAGGGACGAATCCCAATTTTCCAACCAGTTGTCAATTATCTAGATTACTCAAAGAATAATTTCAGTTTCAACATACCATATGACATTGGTGATTTTCTTACTCAAACTAGGTTCTTCTCTCTTTCAAATAATAACTTGCACGGGATCATTCCGGGATCACTGTGCAATGTGAAGTCTCTTCAAGTTCTTGATTTGTCCAGCAATTCTTTGAGTGGCATGATTCCTCGATGCTTATCTGCAACGACCAATCTTGTAGTACTTAATTTAAGGAGAAACAATCTTGCTGGCACAATTTCTGATAAGTTTTCAGCAAATTGTAGTTTGGGAACTTTGGACCTCGGTGCAAACAAAATAGGAGGCAAGTTTCCAAAATCTCTAGCCCGGTGTGAAATGTTAGCAGTGTTAAACCTTGGACACAATCAGATAACTGATGTTTTCCCTCACTTGCTAAAGGAAATATCCACTTTGCGTGTCCTTGTCTTGCGATCCAATAGATTCTATGGGAACATTGGATGTCCCAAAACCAATGGAACCTGGTCAAAGCTTCAAATTATTGACCTTGCTGACAACCATTTTAGTGGAGAAATTCCAGGAGATTGCTTGACAACATGGCCAGAAATGATGGTTGATGGAGATGATCCAGCTCAAGTGCTCAACCACCCTGAATTTCAGATTCTCACTATCTACACCTCCCTTGACTTGTCGTGCAACAACTTCAGTGGATCAATACCTAAGGAAATTGGAGAGCTCAAAGCACTTTACATCCTCAACTTGTCCAGCAATGCTCTCACAGGTGAAATTCCATCCTCATTGGGTAACTTGTTGAAAGTGGAATCCTTAGACCTCTCAAACAATAGCCTGAGCGGGGAAATTCCACCACAGCTTGCAAGACTTACGTTCCTATCATTCTTGAATGTGTCCTGTAATCACCTCGTTGGGAGGATCCCAACCAGCACTCAATTTTCAACGTTTCCAGCAGCTTCTTTCACTGGTAATGAAGGGTTATGGGGGCCTCCTTTGACAGGAGATAACACAACAGAGCTGTCACCACCACCACCATCAGAAAAAGGGTTTTCCCATTCTGGGCCTGAGATTGATTTTGATGTTTTAAGCGTTGAAATTGGATGCATCTTTGGGTTTGGAACTGTGGTCATGCCACTTGTGTTCTGCAAGAGATGGAGGAAATGGTATTACAGAAGTGTGCAGAACATTTTCTTCAAGATGTTCCCTAGTCTGGACAAAAGAAGGGATAGCCGAGGACGACGTGTTTCGAGGAATAGAAGGAGGAGACATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

869

Amino Acids

96.06

Weight (kDa)

8.17

Isoelectric Point (pI)

44.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 381
AccBSI CCGCTC 1 cut(s) 2175
AciI CCGC 1 cut(s) 2175
AclI AACGTT 1 cut(s) 2279
AclWI GGATC 9 cut(s) 703, 817, 1463, 1474, 1791, 1943, 2041, 2248, 2261
AcoI YGGCCR 2 cut(s) 4, 1922
AcuI CTGAAG 3 cut(s) 491, 1295, 2011
AfaI GTAC 3 cut(s) 106, 776, 1569
AfiI CCNNNNNNNGG 6 cut(s) 692, 1312, 2176, 2333, 2394, 2545
AflIII ACRYGT 1 cut(s) 2575
AhdI GACNNNNNGTC 1 cut(s) 862
AjiI CACGTC 1 cut(s) 2576
AjnI CCWGG 3 cut(s) 1108, 1844, 1900
AleI CACNNNNGTG 1 cut(s) 573
Alw21I GWGCWC 2 cut(s) 1965, 2061
Alw26I GTCTC 6 cut(s) 187, 215, 242, 899, 1491, 2593
AlwI GGATC 9 cut(s) 703, 817, 1463, 1474, 1791, 1943, 2041, 2248, 2261
AoxI GGCC 9 cut(s) 4, 19, 246, 448, 832, 938, 1922, 2321, 2396
ApeKI GCWGC 1 cut(s) 2288
ArsI GACNNNNNNTTYG 2 cut(s) 898, 930
Asp700I GAANNNNTTC 2 cut(s) 1370, 2522
AspLEI GCGC 1 cut(s) 367
AspS9I GGNCC 7 cut(s) 449, 938, 1147, 1253, 1645, 2321, 2396
AsuC2I CCSGG 2 cut(s) 1464, 1693
AsuHPI GGTGA 4 cut(s) 1412, 2117, 2231, 2349
AvaII GGWCC 3 cut(s) 1147, 1253, 1645
AxyI CCTNAGG 1 cut(s) 2043
BalI TGGCCA 2 cut(s) 6, 1924
BamHI GGATCC 1 cut(s) 2253
BanI GGYRCC 1 cut(s) 381
BanII GRGCYC 1 cut(s) 2061
BbsI GAAGAC 1 cut(s) 390
Bbv12I GWGCWC 2 cut(s) 1965, 2061
BbvI GCAGC 1 cut(s) 2300
BccI CCATC 8 cut(s) 289, 341, 899, 1927, 1934, 2122, 2377, 2481
BciT130I CCWGG 3 cut(s) 1110, 1846, 1902
BclI TGATCA 1 cut(s) 429
BcnI CCSGG 2 cut(s) 1464, 1693
BcoDI GTCTC 6 cut(s) 187, 215, 242, 899, 1491, 2593
BfaI CTAG 5 cut(s) 1247, 1352, 1419, 1688, 2541
BglII AGATCT 1 cut(s) 609
BisI GCNGC 1 cut(s) 2289
BlsI GCNGC 1 cut(s) 2290
BmcAI AGTACT 1 cut(s) 1569
Bme1390I CCNGG 5 cut(s) 1110, 1464, 1693, 1846, 1902
Bme18I GGWCC 3 cut(s) 1147, 1253, 1645
BmeRI GACNNNNNGTC 1 cut(s) 862
BmgBI CACGTC 1 cut(s) 2576
BmgT120I GGNCC 7 cut(s) 449, 938, 1147, 1253, 1645, 2321, 2396
BmiI GGNNCC 7 cut(s) 317, 383, 670, 1254, 1843, 2255, 2322
BmrFI CCNGG 5 cut(s) 1110, 1464, 1693, 1846, 1902
BmsI GCATC 3 cut(s) 1529, 2426, 2448
BpiI GAAGAC 1 cut(s) 390
BpmI CTGGAG 1 cut(s) 23
Bpu10I CCTNAGC 2 cut(s) 974, 2171
BpuEI CTTGAG 3 cut(s) 442, 1138, 1941
BpuMI CCSGG 2 cut(s) 1464, 1693
BsaBI GATNNNNATC 1 cut(s) 1543
BsaI GGTCTC 1 cut(s) 899
BsaJI CCNNGG 6 cut(s) 664, 968, 1108, 1648, 1720, 2566
BsaXI ACNNNNNCTCC 2 cut(s) 1186, 1216
Bsc4I CCNNNNNNNGG 6 cut(s) 692, 1312, 2176, 2333, 2394, 2545
Bse1I ACTGG 7 cut(s) 40, 141, 383, 811, 1190, 1337, 2305
Bse21I CCTNAGG 1 cut(s) 2043
Bse3DI GCAATG 3 cut(s) 32, 1483, 2098
Bse8I GATNNNNATC 1 cut(s) 1543
BseBI CCWGG 3 cut(s) 1110, 1846, 1902
BseDI CCNNGG 6 cut(s) 664, 968, 1108, 1648, 1720, 2566
BseGI GGATG 4 cut(s) 1829, 2073, 2114, 2441
BseJI GATNNNNATC 1 cut(s) 1543
BseLI CCNNNNNNNGG 6 cut(s) 692, 1312, 2176, 2333, 2394, 2545
BseMI GCAATG 3 cut(s) 32, 1483, 2098
BseMII CTCAG 4 cut(s) 198, 501, 2162, 2391
BseNI ACTGG 7 cut(s) 40, 141, 383, 811, 1190, 1337, 2305
BseXI GCAGC 1 cut(s) 2300
BsgI GTGCAG 1 cut(s) 2534
BshFI GGCC 9 cut(s) 6, 21, 248, 450, 834, 940, 1924, 2323, 2398
BshNI GGYRCC 1 cut(s) 381
BsiHKAI GWGCWC 2 cut(s) 1965, 2061
BsiSI CCGG 2 cut(s) 1463, 1693
BslFI GGGAC 3 cut(s) 385, 1329, 1812
BslI CCNNNNNNNGG 6 cut(s) 692, 1312, 2176, 2333, 2394, 2545
BsmAI GTCTC 6 cut(s) 187, 215, 242, 899, 1491, 2593
BsmFI GGGAC 3 cut(s) 385, 1329, 1812
BsnI GGCC 9 cut(s) 6, 21, 248, 450, 834, 940, 1924, 2323, 2398
Bso31I GGTCTC 1 cut(s) 899
Bsp1286I GDGCHC 2 cut(s) 1965, 2061
Bsp1407I TGTACA 1 cut(s) 774
BspACI CCGC 1 cut(s) 2175
BspANI GGCC 9 cut(s) 6, 21, 248, 450, 834, 940, 1924, 2323, 2398
BspCNI CTCAG 4 cut(s) 197, 500, 2163, 2392
BspLI GGNNCC 7 cut(s) 317, 383, 670, 1254, 1843, 2255, 2322
BspPI GGATC 9 cut(s) 703, 817, 1463, 1474, 1791, 1943, 2041, 2248, 2261
BspT107I GGYRCC 1 cut(s) 381
BspTNI GGTCTC 1 cut(s) 899
BsrBI CCGCTC 1 cut(s) 2175
BsrDI GCAATG 3 cut(s) 32, 1483, 2098
BsrGI TGTACA 1 cut(s) 774
BsrI ACTGG 7 cut(s) 40, 141, 383, 811, 1190, 1337, 2305
BssECI CCNNGG 6 cut(s) 664, 968, 1108, 1648, 1720, 2566
BssT1I CCWWGG 3 cut(s) 664, 968, 1720
Bst2UI CCWGG 3 cut(s) 1110, 1846, 1902
Bst4CI ACNGT 2 cut(s) 1473, 2458
Bst6I CTCTTC 2 cut(s) 705, 1494
BstAUI TGTACA 1 cut(s) 774
BstC8I GCNNGC 2 cut(s) 1597, 2196
BstDEI CTNAG 8 cut(s) 184, 487, 572, 974, 2043, 2149, 2171, 2400
BstENI CCTNNNNNAGG 1 cut(s) 2331
BstF5I GGATG 4 cut(s) 1829, 2073, 2114, 2441
BstHHI GCGC 1 cut(s) 367
BstMAI GTCTC 6 cut(s) 187, 215, 242, 899, 1491, 2593
BstMWI GCNNNNNNNGC 1 cut(s) 979
BstNI CCWGG 3 cut(s) 1110, 1846, 1902
BstSCI CCNGG 5 cut(s) 1108, 1462, 1691, 1844, 1900
BstV1I GCAGC 1 cut(s) 2300
BstV2I GAAGAC 1 cut(s) 390
BstX2I RGATCY 3 cut(s) 609, 695, 2253
BstXI CCANNNNNNTGG 2 cut(s) 1169, 1889
BstYI RGATCY 3 cut(s) 609, 695, 2253
Bsu36I CCTNAGG 1 cut(s) 2043
BsuRI GGCC 9 cut(s) 6, 21, 248, 450, 834, 940, 1924, 2323, 2398
BtrI CACGTC 1 cut(s) 2576
BtsCI GGATG 4 cut(s) 1829, 2073, 2114, 2441
BtsI GCAGTG 3 cut(s) 178, 401, 1716
BtsIMutI CAGTG 8 cut(s) 148, 178, 401, 804, 1469, 1716, 2035, 2298
Cac8I GCNNGC 2 cut(s) 1597, 2196
CfoI GCGC 1 cut(s) 367
Cfr13I GGNCC 7 cut(s) 449, 938, 1147, 1253, 1645, 2321, 2396
CseI GACGC 1 cut(s) 988
CsiI ACCWGGT 1 cut(s) 1844
Csp6I GTAC 3 cut(s) 105, 775, 1568
CspCI CAANNNNNGTGG 2 cut(s) 2011, 2046
CviAII CATG 7 cut(s) 2, 93, 590, 1169, 1528, 1920, 2464
CviQI GTAC 3 cut(s) 105, 775, 1568
DdeI CTNAG 8 cut(s) 184, 487, 572, 974, 2043, 2149, 2171, 2400
DriI GACNNNNNGTC 1 cut(s) 862
EaeI YGGCCR 2 cut(s) 4, 1922
Eam1104I CTCTTC 2 cut(s) 705, 1494
Eam1105I GACNNNNNGTC 1 cut(s) 862
EarI CTCTTC 2 cut(s) 705, 1494
Ecl136II GAGCTC 1 cut(s) 2059
Eco130I CCWWGG 3 cut(s) 664, 968, 1720
Eco147I AGGCCT 1 cut(s) 834
Eco24I GRGCYC 1 cut(s) 2061
Eco31I GGTCTC 1 cut(s) 899
Eco47I GGWCC 3 cut(s) 1147, 1253, 1645
Eco53kI GAGCTC 1 cut(s) 2059
Eco57I CTGAAG 3 cut(s) 491, 1295, 2011
Eco81I CCTNAGG 1 cut(s) 2043
EcoICRI GAGCTC 1 cut(s) 2059
EcoNI CCTNNNNNAGG 1 cut(s) 2331
EcoO109I RGGNCCY 4 cut(s) 449, 938, 1253, 2321
EcoRI GAATTC 1 cut(s) 97
EcoRII CCWGG 3 cut(s) 1108, 1844, 1900
EcoT14I CCWWGG 3 cut(s) 664, 968, 1720
EcoT22I ATGCAT 1 cut(s) 2441
EcoT38I GRGCYC 1 cut(s) 2061
ErhI CCWWGG 3 cut(s) 664, 968, 1720
FaeI CATG 6 cut(s) 96, 593, 1172, 1531, 1923, 2467
FalI AAGNNNNNCTT 2 cut(s) 596, 628
FaqI GGGAC 3 cut(s) 385, 1329, 1812
FatI CATG 6 cut(s) 92, 589, 1168, 1527, 1919, 2463
FauI CCCGC 1 cut(s) 2168
FauNDI CATATG 1 cut(s) 1390
FbaI TGATCA 1 cut(s) 429
Fnu4HI GCNGC 1 cut(s) 2289
FokI GGATG 4 cut(s) 1836, 2060, 2101, 2448
FriOI GRGCYC 1 cut(s) 2061
Fsp4HI GCNGC 1 cut(s) 2289
FspBI CTAG 5 cut(s) 1247, 1352, 1419, 1688, 2541
GlaI GCGC 1 cut(s) 366
GluI GCNGC 1 cut(s) 2289
GsuI CTGGAG 1 cut(s) 23
HaeIII GGCC 9 cut(s) 6, 21, 248, 450, 834, 940, 1924, 2323, 2398
HapII CCGG 2 cut(s) 1463, 1693
HgaI GACGC 1 cut(s) 988
HhaI GCGC 1 cut(s) 367
Hin1II CATG 6 cut(s) 96, 593, 1172, 1531, 1923, 2467
Hin6I GCGC 1 cut(s) 365
HinP1I GCGC 1 cut(s) 365
HindIII AAGCTT 2 cut(s) 473, 1853
HinfI GANTC 9 cut(s) 65, 176, 1104, 1165, 1320, 1531, 1806, 1984, 2144
HpaII CCGG 2 cut(s) 1463, 1693
HphI GGTGA 4 cut(s) 1412, 2117, 2231, 2349
Hpy166II GTNNAC 1 cut(s) 856
Hpy188I TCNGA 8 cut(s) 315, 551, 1132, 1269, 1609, 1734, 1983, 2374
Hpy8I GTNNAC 1 cut(s) 856
Hpy99I CGWCG 1 cut(s) 2577
HpyAV CCTTC 8 cut(s) 11, 824, 929, 1024, 1304, 2303, 2550, 2586
HpyCH4III ACNGT 2 cut(s) 1473, 2458
HpyCH4IV ACGT 3 cut(s) 2207, 2279, 2575
HpyF10VI GCNNNNNNNGC 1 cut(s) 979
HpyF3I CTNAG 8 cut(s) 184, 487, 572, 974, 2043, 2149, 2171, 2400
HpySE526I ACGT 3 cut(s) 2207, 2279, 2575
Hsp92II CATG 6 cut(s) 96, 593, 1172, 1531, 1923, 2467
HspAI GCGC 1 cut(s) 365
Ksp22I TGATCA 1 cut(s) 429
LmnI GCTCC 4 cut(s) 42, 325, 666, 674
Lsp1109I GCAGC 1 cut(s) 2300
LweI GCATC 3 cut(s) 1529, 2426, 2448
MabI ACCWGGT 1 cut(s) 1844
MaeI CTAG 5 cut(s) 1247, 1352, 1419, 1688, 2541
MaeII ACGT 3 cut(s) 2207, 2279, 2575
MaeIII GTNAC 6 cut(s) 130, 437, 585, 1240, 2126, 2355
MbiI CCGCTC 1 cut(s) 2175
MfeI CAATTG 2 cut(s) 433, 842
MflI RGATCY 3 cut(s) 609, 695, 2253
MhlI GDGCHC 2 cut(s) 1965, 2061
MlsI TGGCCA 2 cut(s) 6, 1924
MluNI TGGCCA 2 cut(s) 6, 1924
MmeI TCCRAC 3 cut(s) 912, 1326, 1357
Mox20I TGGCCA 2 cut(s) 6, 1924
Mph1103I ATGCAT 1 cut(s) 2441
MroXI GAANNNNTTC 2 cut(s) 1370, 2522
MscI TGGCCA 2 cut(s) 6, 1924
MseI TTAA 7 cut(s) 651, 960, 1023, 1572, 1577, 1715, 2420
MslI CAYNNNNRTG 3 cut(s) 345, 573, 1887
Msp20I TGGCCA 2 cut(s) 6, 1924
MspI CCGG 2 cut(s) 1463, 1693
MspR9I CCNGG 5 cut(s) 1110, 1464, 1693, 1846, 1902
MunI CAATTG 2 cut(s) 433, 842
MvaI CCWGG 3 cut(s) 1110, 1846, 1902
MwoI GCNNNNNNNGC 1 cut(s) 979
NciI CCSGG 2 cut(s) 1464, 1693
NdeI CATATG 1 cut(s) 1390
NlaIII CATG 6 cut(s) 96, 593, 1172, 1531, 1923, 2467
NlaIV GGNNCC 7 cut(s) 317, 383, 670, 1254, 1843, 2255, 2322
NmeAIII GCCGAG 1 cut(s) 2591
NmuCI GTSAC 1 cut(s) 2355
NsiI ATGCAT 1 cut(s) 2441
OliI CACNNNNGTG 1 cut(s) 573
PceI AGGCCT 1 cut(s) 834
PdmI GAANNNNTTC 2 cut(s) 1370, 2522
PfeI GAWTC 9 cut(s) 65, 176, 1104, 1165, 1320, 1531, 1806, 1984, 2144
PfoI TCCNGGA 2 cut(s) 1462, 1900
PkrI GCNGC 1 cut(s) 2290
PpuMI RGGWCCY 1 cut(s) 1253
Psp124BI GAGCTC 1 cut(s) 2061
Psp1406I AACGTT 1 cut(s) 2279
Psp5II RGGWCCY 1 cut(s) 1253
Psp6I CCWGG 3 cut(s) 1108, 1844, 1900
PspGI CCWGG 3 cut(s) 1108, 1844, 1900
PspN4I GGNNCC 7 cut(s) 317, 383, 670, 1254, 1843, 2255, 2322
PspPI GGNCC 7 cut(s) 449, 938, 1147, 1253, 1645, 2321, 2396
PspPPI RGGWCCY 1 cut(s) 1253
PsuI RGATCY 3 cut(s) 609, 695, 2253
RsaI GTAC 3 cut(s) 106, 776, 1569
RsaNI GTAC 3 cut(s) 105, 775, 1568
RseI CAYNNNNRTG 3 cut(s) 345, 573, 1887
SacI GAGCTC 1 cut(s) 2061
SaqAI TTAA 7 cut(s) 651, 960, 1023, 1572, 1577, 1715, 2420
SatI GCNGC 1 cut(s) 2289
Sau96I GGNCC 7 cut(s) 449, 938, 1147, 1253, 1645, 2321, 2396
ScaI AGTACT 1 cut(s) 1569
ScrFI CCNGG 5 cut(s) 1110, 1464, 1693, 1846, 1902
SduI GDGCHC 2 cut(s) 1965, 2061
SexAI ACCWGGT 1 cut(s) 1844
SfaNI GCATC 3 cut(s) 1529, 2426, 2448
SinI GGWCC 3 cut(s) 1147, 1253, 1645
SmiMI CAYNNNNRTG 3 cut(s) 345, 573, 1887
SmlI CTYRAG 3 cut(s) 421, 1117, 1956
SmoI CTYRAG 3 cut(s) 421, 1117, 1956
SseBI AGGCCT 1 cut(s) 834
SsiI CCGC 1 cut(s) 2175
SspMI CTAG 5 cut(s) 1247, 1352, 1419, 1688, 2541
SstI GAGCTC 1 cut(s) 2061
StuI AGGCCT 1 cut(s) 834
StyD4I CCNGG 5 cut(s) 1108, 1462, 1691, 1844, 1900
StyI CCWWGG 3 cut(s) 664, 968, 1720
TaaI ACNGT 2 cut(s) 1473, 2458
TaiI ACGT 3 cut(s) 2210, 2282, 2578
TaqI TCGA 4 cut(s) 639, 1040, 1537, 2582
TatI WGTACW 2 cut(s) 774, 1567
TfiI GAWTC 9 cut(s) 65, 176, 1104, 1165, 1320, 1531, 1806, 1984, 2144
Tru1I TTAA 7 cut(s) 651, 960, 1023, 1572, 1577, 1715, 2420
Tru9I TTAA 7 cut(s) 651, 960, 1023, 1572, 1577, 1715, 2420
TscAI CASTG 8 cut(s) 148, 178, 408, 811, 1476, 1716, 2035, 2305
TseFI GTSAC 1 cut(s) 2355
TseI GCWGC 1 cut(s) 2288
Tsp45I GTSAC 1 cut(s) 2355
TspDTI ATGAA 7 cut(s) 329, 453, 467, 965, 1157, 1286, 2322
TspRI CASTG 8 cut(s) 148, 178, 408, 811, 1476, 1716, 2035, 2305
VpaK11BI GGWCC 3 cut(s) 1147, 1253, 1645
XagI CCTNNNNNAGG 1 cut(s) 2331
XbaI TCTAGA 2 cut(s) 1246, 1351
XcmI CCANNNNNNNNNTGG 1 cut(s) 898
XmnI GAANNNNTTC 2 cut(s) 1370, 2522
XspI CTAG 5 cut(s) 1247, 1352, 1419, 1688, 2541
ZrmI AGTACT 1 cut(s) 1569
Zsp2I ATGCAT 1 cut(s) 2441
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.