Rroxscaffold_6G00417860

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000047
Physical Location & Seq
Reverse (-)
39459437 .. 39461986
2550 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00417860.1

Sequence Viewer

Length: 2550 bp
ATGGAACCCTTCTTCCACGGTACCATTTCCGTTACCAAAATATCTGGATCTCTTCAATACCTGGATCTATACTACACTAATTTTTCAGGGGTATTACCAAACTCTATTGGCAACCTCAAAATGCTGTCCGCAATTGATATTGGAGCCTGTAATTTCACGGGATCAATCCCTAAGTCAATGACAAACCTTACGCAATTGGTTTATTTGTCGATGGATGGGAACAACTTTGAAGGTTCAATTCCGTCATTCAGTGGGGCCAAGAATCTAAAATACATAGGCCTCTCTTCAAATGGGCTAACAGGTAATATTATTAATTGCATCCAGTGGGGAAACCTTACTAACCTATCCTCTCTCTACTTAGCTGGCAATATGCTCGATGGGAATATTCCATCATCACTGTTTTCTCTTCCCTTGCTAGATTGTATAGATCTTTCCAACAACCAATTCTCTGGTCATTTTCCTGAAATTTCTAATCTCTCATCCTACTCTGTCAAAAGCCTTTATTTGAGTGGAAACAATCTGGAAGGGCCAATACCCATGTCTATCTTTAATTTACGGAGCCTTGTTGAGCTTTTTCTTTCTTCAAATAATTTCAGTGGCTCATTTCCTCTAGATGGTCTTCAACATCTGAGAAATCTTTCTTATCTTGATCTTTCCGACAACCAATTCTCTGGTCATTTTCCTGAAATTTCTAATCTCTCATCCTACTCTGTCAAAAGCCTTTATTTGAGTGGAAACAATCTGGAAGGGCCAATACCCATGTCTATCTTTAATTTACGGAGCCTTGTTGAGCTTTCTCTTTCTTCAAATAATTTCAGTGGCTCATTTCCTCTAGATGGTCTTCAACAACTGAGAAATCTTTCTTATCTTGATCTTTCACACAATAGCTTGCTTCTTAGCCATGATGCTTCCAATTTCTCATATTCCTACTTTCCTCAGGTCAACTATTTGTTGTTGGCTTCATTAAACTTGAGAACATTCCCTGATTTCTTGAGAAATCAATCTGAATTACGTTCTTTAGATCTTTCAGATAACCAGATACAGGGCAAGATACCCAACTGGATTTGGAGGTTCAGAGATCTCCATTACCTAAATCTTTCGTGTAACTCTCTAGAAACTCTAGAAGGTCATACAATCAATCTCACTTCTATGGGACTCCTTGACCTTCATTCCAACAAGCTTCATGGGGAAATCCCAATTTCATCGTCACCTAACATTTATTATCTGGATTACTCAAGGAACAACTTCAGCTCTACCATACCAACTACCATTGGAGATATGCTTCTTCAAACTAGATTCTTCTATGTCGCAAGCAACAACCTTCAGGGGATAATTCCTGGAACAATATGCAATTTACTTTACCTTGAGGTTCTTGATCTATCCAATAATTCCTTAAGTGGCACGGTCCCTCACTGCCTGACTACAATGAGCACTCTTTCAGTACTTAATTTAAGGAGAAACAATCTTGGAAGTATAGACATGTTGTCTCACAATTGCAGTTTGCATACTCTAGACATCAGTGAGAATCTTATACAAAGTCAGTTTCTAAAATCACTTGTCAACTGCCTTCAATTACAGGTTCTAAACCTTGGAAAAAATCAAATAACAGGTCCATTTCCATGCTTTTTGAAGAACATATCCACCTTGCGTGTCCTTATCTTGCGATCCAATAAATTTTATGGAGGTATTGGATGTCCCAAGATTAATGGCACTTGGCCAATGCTTCAAATCATAGACCTCGCTCACAACAATTTTAGTGGAAATGTACTAGGGATAGCATTGACAACTTGGCAGGCAATGATGGCTAATGAAGATGAGGCCTCATCAAAGCTCAATCACCTTCAATTTCAGGACAATAACTATAGTACGATTTATCAGGATACAGTTACTGTTACCAACAAAGGTTTCGAGATAGAGCTGATAAAGATTTTAACAGTCTTCACCTCGATCGATTTCTCCTGCAAGAAGTTCAACGGATCAATACCTTATGAAATTGGAGAACTCAAATCACTGCATATCCTCAACTTGTCCAATAATGCTTTCACAGGTGCAATTCCAACATCATTAAGCAACTTGAGTCAGCTAGAGTCTTTAGACCTCTCACAGAACACCTTGAGTGGTCAAATTCCACTACAGCTTACAAAACTCACTTTCCTTTCATTCTTGAATCTGTCACGTAATCAATTGGTTGGCAGGATTCCAAGCAGTAATCAGTTTCCAACATTTCCAAAATCTTCCTTTGAAGGAAACAAAAATTTATTCGGGCCTCCTTTGACTGAAGAAAACAGAACAAGGTTGTCACCTTTGGCAACGAAAGGAAGCCATCCAAGTTCTGGAGATGAGATTGATTGGAATATCATCATTGTTGAGATTGGATTTACATGTGGGTTCGGAATTGCCATCGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTATTATAGAGCTATGTATAACATTCTTGTGAAGATATTTCCTCAGCTGGAACACAGGTTTGGTCATCACGGAAGACATGCGTTCATAGGCGAAAGGTACTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

849

Amino Acids

94.77

Weight (kDa)

6.6

Isoelectric Point (pI)

38.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 18 - 81 6.4e-08 Leucine-rich repeat region
LRR_8 PF13855 164 - 223 2.1e-07 Leucine rich repeat
LRR_14 PF23598 164 - 294 5.2e-06 Leucine-rich repeat region
LRR_8 PF13855 238 - 297 2.6e-07 Leucine rich repeat
LRR_8 PF13855 336 - 394 2.8e-06 Leucine rich repeat
LRR_4 PF12799 336 - 376 9.9e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 435 - 489 4e-08 Leucine rich repeat
LRR_14 PF23598 660 - 725 9.6e-06 Leucine-rich repeat region
LRR_8 PF13855 670 - 729 9.2e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 20
AccB1I GGYRCC 1 cut(s) 20
AccB7I CCANNNNNTGG 1 cut(s) 2333
AciI CCGC 1 cut(s) 129
AclWI GGATC 5 cut(s) 55, 72, 169, 1659, 1984
AcoI YGGCCR 1 cut(s) 1715
AcsI RAATTY 5 cut(s) 465, 687, 1673, 2124, 2254
AcuI CTGAAG 3 cut(s) 1231, 1307, 2298
AfaI GTAC 5 cut(s) 22, 1443, 1767, 1867, 2537
AfiI CCNNNNNNNGG 4 cut(s) 614, 836, 1042, 2333
AflII CTTAAG 1 cut(s) 1393
AflIII ACRYGT 2 cut(s) 1479, 2381
AhdI GACNNNNNGTC 1 cut(s) 1483
AjnI CCWGG 2 cut(s) 60, 1336
AjuI GAANNNNNNNTTGG 8 cut(s) 428, 460, 1889, 1921, 2024, 2056, 2481, 2513
AloI GAACNNNNNNTCC 1 cut(s) 29
Alw21I GWGCWC 1 cut(s) 1433
Alw26I GTCTC 2 cut(s) 1491, 2536
AlwI GGATC 5 cut(s) 55, 72, 169, 1659, 1984
AlwNI CAGNNNCTG 1 cut(s) 1889
AoxI GGCC 7 cut(s) 255, 277, 527, 749, 1715, 1818, 2264
ApoI RAATTY 5 cut(s) 465, 687, 1673, 2124, 2254
ArsI GACNNNNNNTTYG 2 cut(s) 1594, 1626
AseI ATTAAT 2 cut(s) 312, 1704
Asp700I GAANNNNTTC 3 cut(s) 637, 859, 1244
Asp718I GGTACC 1 cut(s) 20
AspS9I GGNCC 6 cut(s) 255, 527, 749, 1405, 1610, 2264
AsuHPI GGTGA 4 cut(s) 1200, 1829, 1933, 2292
AvaII GGWCC 2 cut(s) 1405, 1610
AxyI CCTNAGG 1 cut(s) 936
BalI TGGCCA 1 cut(s) 1717
BanI GGYRCC 1 cut(s) 20
BarI GAAGNNNNNNTAC 4 cut(s) 516, 548, 738, 770
BbsI GAAGAC 4 cut(s) 611, 833, 1930, 2518
Bbv12I GWGCWC 1 cut(s) 1433
BbvCI CCTCAGC 1 cut(s) 2481
BcgI CGANNNNNNTGC 2 cut(s) 355, 389
BciT130I CCWGG 2 cut(s) 62, 1338
BciVI GTATCC 1 cut(s) 1873
BcoDI GTCTC 2 cut(s) 1491, 2536
BfaI CTAG 9 cut(s) 416, 611, 833, 1112, 1121, 1293, 1511, 1769, 2084
BfmI CTRYAG 2 cut(s) 1861, 2132
BfrI CTTAAG 1 cut(s) 1393
BfuI GTATCC 1 cut(s) 1873
BglII AGATCT 3 cut(s) 427, 1021, 1078
BmcAI AGTACT 1 cut(s) 1443
Bme1390I CCNGG 2 cut(s) 62, 1338
Bme18I GGWCC 2 cut(s) 1405, 1610
BmeRI GACNNNNNGTC 1 cut(s) 1483
BmgT120I GGNCC 6 cut(s) 255, 527, 749, 1405, 1610, 2264
BmiI GGNNCC 7 cut(s) 6, 22, 145, 256, 560, 782, 1407
BmrFI CCNGG 2 cut(s) 62, 1338
BmsI GCATC 2 cut(s) 327, 895
BpiI GAAGAC 4 cut(s) 611, 833, 1930, 2518
BpmI CTGGAG 1 cut(s) 2355
Bpu10I CCTNAGC 1 cut(s) 2481
BpuEI CTTGAG 6 cut(s) 991, 1012, 1219, 1385, 2095, 2134
Bsa29I ATCGAT 1 cut(s) 1950
BsaAI YACGTR 1 cut(s) 2177
BsaJI CCNNGG 2 cut(s) 16, 1588
Bsc4I CCNNNNNNNGG 4 cut(s) 614, 836, 1042, 2333
Bse1I ACTGG 3 cut(s) 322, 1064, 2543
Bse21I CCTNAGG 1 cut(s) 936
Bse3DI GCAATG 1 cut(s) 1803
BseBI CCWGG 2 cut(s) 62, 1338
BseCI ATCGAT 1 cut(s) 1950
BseDI CCNNGG 2 cut(s) 16, 1588
BseGI GGATG 6 cut(s) 220, 318, 479, 701, 1697, 2323
BseLI CCNNNNNNNGG 4 cut(s) 614, 836, 1042, 2333
BseMI GCAATG 1 cut(s) 1803
BseMII CTCAG 4 cut(s) 620, 842, 950, 2495
BseNI ACTGG 3 cut(s) 322, 1064, 2543
Bsh1285I CGRYCG 1 cut(s) 1950
BshFI GGCC 7 cut(s) 257, 279, 529, 751, 1717, 1820, 2266
BshNI GGYRCC 1 cut(s) 20
BshVI ATCGAT 1 cut(s) 1950
BsiEI CGRYCG 1 cut(s) 1950
BsiHKAI GWGCWC 1 cut(s) 1433
BslFI GGGAC 3 cut(s) 1167, 1391, 1680
BslI CCNNNNNNNGG 4 cut(s) 614, 836, 1042, 2333
BsmAI GTCTC 2 cut(s) 1491, 2536
BsmBI CGTCTC 1 cut(s) 2536
BsmFI GGGAC 3 cut(s) 1167, 1391, 1680
BsnI GGCC 7 cut(s) 257, 279, 529, 751, 1717, 1820, 2266
Bsp1286I GDGCHC 1 cut(s) 1433
BspACI CCGC 1 cut(s) 129
BspANI GGCC 7 cut(s) 257, 279, 529, 751, 1717, 1820, 2266
BspCNI CTCAG 4 cut(s) 621, 843, 949, 2494
BspDI ATCGAT 1 cut(s) 1950
BspLI GGNNCC 7 cut(s) 6, 22, 145, 256, 560, 782, 1407
BspPI GGATC 5 cut(s) 55, 72, 169, 1659, 1984
BspT107I GGYRCC 1 cut(s) 20
BspTI CTTAAG 1 cut(s) 1393
BsrDI GCAATG 1 cut(s) 1803
BsrI ACTGG 3 cut(s) 322, 1064, 2543
BssECI CCNNGG 2 cut(s) 16, 1588
BssT1I CCWWGG 1 cut(s) 1588
Bst2UI CCWGG 2 cut(s) 62, 1338
Bst4CI ACNGT 6 cut(s) 20, 399, 1405, 1885, 1891, 1936
Bst6I CTCTTC 3 cut(s) 57, 289, 411
BstAFI CTTAAG 1 cut(s) 1393
BstBAI YACGTR 1 cut(s) 2177
BstC8I GCNNGC 4 cut(s) 364, 890, 1312, 1794
BstDEI CTNAG 7 cut(s) 171, 358, 629, 851, 896, 936, 2481
BstDSI CCRYGG 1 cut(s) 16
BstF5I GGATG 6 cut(s) 220, 318, 479, 701, 1697, 2323
BstMAI GTCTC 2 cut(s) 1491, 2536
BstMCI CGRYCG 1 cut(s) 1950
BstMWI GCNNNNNNNGC 1 cut(s) 1802
BstNI CCWGG 2 cut(s) 62, 1338
BstNSI RCATGY 3 cut(s) 1483, 2385, 2519
BstSCI CCNGG 2 cut(s) 60, 1336
BstSFI CTRYAG 2 cut(s) 1861, 2132
BstV2I GAAGAC 4 cut(s) 611, 833, 1930, 2518
BstX2I RGATCY 5 cut(s) 47, 64, 427, 1021, 1078
BstXI CCANNNNNNTGG 2 cut(s) 449, 671
BstYI RGATCY 5 cut(s) 47, 64, 427, 1021, 1078
Bsu15I ATCGAT 1 cut(s) 1950
Bsu36I CCTNAGG 1 cut(s) 936
BsuI GTATCC 1 cut(s) 1873
BsuRI GGCC 7 cut(s) 257, 279, 529, 751, 1717, 1820, 2266
BsuTUI ATCGAT 1 cut(s) 1950
BtgI CCRYGG 1 cut(s) 16
BtsCI GGATG 6 cut(s) 220, 318, 479, 701, 1697, 2323
BtsI GCAGTG 2 cut(s) 1411, 2009
BtsIMutI CAGTG 8 cut(s) 256, 329, 395, 601, 823, 1411, 1525, 2009
Cac8I GCNNGC 4 cut(s) 364, 890, 1312, 1794
CaiI CAGNNNCTG 1 cut(s) 1889
Cfr13I GGNCC 6 cut(s) 255, 527, 749, 1405, 1610, 2264
ClaI ATCGAT 1 cut(s) 1950
Csp6I GTAC 5 cut(s) 21, 1442, 1766, 1866, 2536
CspCI CAANNNNNGTGG 2 cut(s) 1738, 1773
CviAII CATG 8 cut(s) 538, 760, 902, 1184, 1480, 1620, 2382, 2516
CviQI GTAC 5 cut(s) 21, 1442, 1766, 1866, 2536
DdeI CTNAG 7 cut(s) 171, 358, 629, 851, 896, 936, 2481
DriI GACNNNNNGTC 1 cut(s) 1483
EaeI YGGCCR 1 cut(s) 1715
Eam1104I CTCTTC 3 cut(s) 57, 289, 411
Eam1105I GACNNNNNGTC 1 cut(s) 1483
EarI CTCTTC 3 cut(s) 57, 289, 411
Eco130I CCWWGG 1 cut(s) 1588
Eco147I AGGCCT 2 cut(s) 279, 1820
Eco47I GGWCC 2 cut(s) 1405, 1610
Eco57I CTGAAG 3 cut(s) 1231, 1307, 2298
Eco81I CCTNAGG 1 cut(s) 936
EcoRII CCWGG 2 cut(s) 60, 1336
EcoT14I CCWWGG 1 cut(s) 1588
ErhI CCWWGG 1 cut(s) 1588
Esp3I CGTCTC 1 cut(s) 2536
FaeI CATG 8 cut(s) 541, 763, 905, 1187, 1483, 1623, 2385, 2519
FaqI GGGAC 3 cut(s) 1167, 1391, 1680
FatI CATG 8 cut(s) 537, 759, 901, 1183, 1479, 1619, 2381, 2515
FokI GGATG 6 cut(s) 227, 305, 466, 688, 1704, 2310
FspBI CTAG 9 cut(s) 416, 611, 833, 1112, 1121, 1293, 1511, 1769, 2084
GsuI CTGGAG 1 cut(s) 2355
HaeIII GGCC 7 cut(s) 257, 279, 529, 751, 1717, 1820, 2266
Hin1II CATG 8 cut(s) 541, 763, 905, 1187, 1483, 1623, 2385, 2519
HincII GTYRAC 2 cut(s) 943, 1561
HindII GTYRAC 2 cut(s) 943, 1561
HindIII AAGCTT 1 cut(s) 1178
HinfI GANTC 8 cut(s) 262, 1155, 1296, 1525, 2077, 2087, 2167, 2197
HphI GGTGA 4 cut(s) 1200, 1829, 1933, 2292
Hpy166II GTNNAC 2 cut(s) 943, 1561
Hpy188I TCNGA 6 cut(s) 630, 658, 1006, 1030, 1076, 2393
Hpy8I GTNNAC 2 cut(s) 943, 1561
HpyCH4III ACNGT 6 cut(s) 20, 399, 1405, 1885, 1891, 1936
HpyCH4IV ACGT 3 cut(s) 1012, 2176, 2545
HpyCH4V TGCA 8 cut(s) 318, 1350, 1497, 1504, 1962, 2014, 2051, 2421
HpyF10VI GCNNNNNNNGC 1 cut(s) 1802
HpyF3I CTNAG 7 cut(s) 171, 358, 629, 851, 896, 936, 2481
HpySE526I ACGT 3 cut(s) 1012, 2176, 2545
Hsp92II CATG 8 cut(s) 541, 763, 905, 1187, 1483, 1623, 2385, 2519
KpnI GGTACC 1 cut(s) 24
LmnI GCTCC 3 cut(s) 143, 558, 780
LweI GCATC 2 cut(s) 327, 895
MaeI CTAG 9 cut(s) 416, 611, 833, 1112, 1121, 1293, 1511, 1769, 2084
MaeII ACGT 3 cut(s) 1012, 2176, 2545
MaeIII GTNAC 8 cut(s) 31, 1103, 1206, 1885, 1891, 2172, 2298, 2406
MfeI CAATTG 4 cut(s) 132, 194, 1492, 2183
MflI RGATCY 5 cut(s) 47, 64, 427, 1021, 1078
MhlI GDGCHC 1 cut(s) 1433
MlsI TGGCCA 1 cut(s) 1717
MluNI TGGCCA 1 cut(s) 1717
MlyI GAGTC 3 cut(s) 1149, 2086, 2096
MmeI TCCRAC 5 cut(s) 459, 681, 1197, 2081, 2243
Mox20I TGGCCA 1 cut(s) 1717
MroXI GAANNNNTTC 3 cut(s) 637, 859, 1244
MscI TGGCCA 1 cut(s) 1717
MslI CAYNNNNRTG 3 cut(s) 1148, 1618, 2465
Msp20I TGGCCA 1 cut(s) 1717
MspA1I CMGCKG 1 cut(s) 2485
MspCI CTTAAG 1 cut(s) 1393
MspR9I CCNGG 2 cut(s) 62, 1338
MunI CAATTG 4 cut(s) 132, 194, 1492, 2183
MvaI CCWGG 2 cut(s) 62, 1338
MwoI GCNNNNNNNGC 1 cut(s) 1802
NlaIII CATG 8 cut(s) 541, 763, 905, 1187, 1483, 1623, 2385, 2519
NlaIV GGNNCC 7 cut(s) 6, 22, 145, 256, 560, 782, 1407
NmuCI GTSAC 4 cut(s) 1206, 2172, 2298, 2406
NspI RCATGY 3 cut(s) 1483, 2385, 2519
PceI AGGCCT 2 cut(s) 279, 1820
PciI ACATGT 2 cut(s) 1479, 2381
PdmI GAANNNNTTC 3 cut(s) 637, 859, 1244
PfeI GAWTC 5 cut(s) 262, 1296, 1525, 2167, 2197
PflMI CCANNNNNTGG 1 cut(s) 2333
PfoI TCCNGGA 1 cut(s) 1336
Ple19I CGATCG 1 cut(s) 1950
PleI GAGTC 3 cut(s) 1149, 2085, 2095
PpsI GAGTC 3 cut(s) 1149, 2085, 2095
Ppu21I YACGTR 1 cut(s) 2177
PscI ACATGT 2 cut(s) 1479, 2381
PshBI ATTAAT 2 cut(s) 312, 1704
Psp6I CCWGG 2 cut(s) 60, 1336
PspGI CCWGG 2 cut(s) 60, 1336
PspN4I GGNNCC 7 cut(s) 6, 22, 145, 256, 560, 782, 1407
PspPI GGNCC 6 cut(s) 255, 527, 749, 1405, 1610, 2264
PstNI CAGNNNCTG 1 cut(s) 1889
PsuI RGATCY 5 cut(s) 47, 64, 427, 1021, 1078
PvuI CGATCG 1 cut(s) 1950
PvuII CAGCTG 1 cut(s) 2485
RsaI GTAC 5 cut(s) 22, 1443, 1767, 1867, 2537
RsaNI GTAC 5 cut(s) 21, 1442, 1766, 1866, 2536
RseI CAYNNNNRTG 3 cut(s) 1148, 1618, 2465
Sau96I GGNCC 6 cut(s) 255, 527, 749, 1405, 1610, 2264
ScaI AGTACT 1 cut(s) 1443
SchI GAGTC 3 cut(s) 1149, 2086, 2096
ScrFI CCNGG 2 cut(s) 62, 1338
SduI GDGCHC 1 cut(s) 1433
SfaNI GCATC 2 cut(s) 327, 895
SfcI CTRYAG 2 cut(s) 1861, 2132
SinI GGWCC 2 cut(s) 1405, 1610
SmiMI CAYNNNNRTG 3 cut(s) 1148, 1618, 2465
SmlI CTYRAG 7 cut(s) 970, 991, 1234, 1364, 1393, 2074, 2113
SmoI CTYRAG 7 cut(s) 970, 991, 1234, 1364, 1393, 2074, 2113
SseBI AGGCCT 2 cut(s) 279, 1820
SsiI CCGC 1 cut(s) 129
SspI AATATT 2 cut(s) 307, 385
SspMI CTAG 9 cut(s) 416, 611, 833, 1112, 1121, 1293, 1511, 1769, 2084
StuI AGGCCT 2 cut(s) 279, 1820
StyD4I CCNGG 2 cut(s) 60, 1336
StyI CCWWGG 1 cut(s) 1588
TaaI ACNGT 6 cut(s) 20, 399, 1405, 1885, 1891, 1936
TaiI ACGT 3 cut(s) 1015, 2179, 2548
TaqI TCGA 5 cut(s) 209, 375, 1908, 1946, 1950
TatI WGTACW 2 cut(s) 1441, 1765
TfiI GAWTC 5 cut(s) 262, 1296, 1525, 2167, 2197
TscAI CASTG 8 cut(s) 256, 329, 402, 601, 823, 1418, 1525, 2016
TseFI GTSAC 4 cut(s) 1206, 2172, 2298, 2406
Tsp45I GTSAC 4 cut(s) 1206, 2172, 2298, 2406
TspDTI ATGAA 8 cut(s) 951, 1157, 1172, 1191, 1824, 2004, 2148, 2512
TspGWI ACGGA 6 cut(s) 19, 231, 571, 793, 1989, 2523
TspRI CASTG 8 cut(s) 256, 329, 402, 601, 823, 1418, 1525, 2016
Van91I CCANNNNNTGG 1 cut(s) 2333
Vha464I CTTAAG 1 cut(s) 1393
VpaK11BI GGWCC 2 cut(s) 1405, 1610
VspI ATTAAT 2 cut(s) 312, 1704
XapI RAATTY 5 cut(s) 465, 687, 1673, 2124, 2254
XbaI TCTAGA 5 cut(s) 610, 832, 1111, 1120, 1510
XceI RCATGY 3 cut(s) 1483, 2385, 2519
XcmI CCANNNNNNNNNTGG 1 cut(s) 2330
XmnI GAANNNNTTC 3 cut(s) 637, 859, 1244
XspI CTAG 9 cut(s) 416, 611, 833, 1112, 1121, 1293, 1511, 1769, 2084
ZrmI AGTACT 1 cut(s) 1443
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.