RchiOBHm_Chr3g0481181

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000047
Physical Location & Seq
Reverse (-)
27252856 .. 27256280
3425 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44615

Sequence Viewer

Length: 3291 bp
ATGCCAACTTTGTTCCTCTATTTCTTCCTTTTCTTATTCACTACCACTGTTACTAAACTCATCCCCACAGTTCACAGCAACTGTATTGAAGCCCATAGACAATCATTGCTCCATTTCAAACAAAGTCTTGTACTATTTGATTCCTCCAAATCCTCCAAGCTTATCACATGGAATTCGAGTACCGAATGCTGTTCTTGGCTCGGTGTAACTTGCAGCACTAATGGGAGTGTTGTTGGTCTTGATATCAGCAACGAGTCTATCTCATGCTACATTGACAATTCAAGCAGTCTCTTTCAACTTCAACATCTTCAGAGCCTCAATTTGGCTGATAATGACTTCAGAAGCTCCTCAATTCCACCTGCAATCGGAAAGCTTACAGAGTTGAGGTATCTGAATTTACGTGATGCTTCTTTTTCTGGGGTTATTCCCATTGAGATTTCACGCTTAACTAGGCTGATAACTCTTGATCTCTCTAGAAATGGCTACCACTCTTTAGAAGTTGAGAACCCAAATTTAAGCATGCTAATTCAAAATCTCACAGAGCTTACAGAGTTATATCTTGATTTAGTATGGATGCGAGGACTGGGGAGTGACTGGTGCGAAGCCATATCATCTTCACTTCCGAAGCTGAGGGTGTTGAGCTTTTCTGAAGGTGATCTTTCAGGCCCTATTTGTGAGTCCCTTGCAAAGCTTCAATCTCTGTATGAGATTGACTTGTCATCCAACTCCTTCTATGCTCCGGTTCCAAGAGTCTTTGCCAATTTTTCAAACTTGACTTACTTGAGTCTTTATAATTCTAACTTGCTCGGAACATTCCCTAAAGAGATCTTTCAGATACCTTCCCTGCAAACCATTCACCTTTTTGAAAATTTTGATCTTAATGGTTCATTTCCAGAATTTCCAAACAATGGGTCTCTTCGATCCTTAATTGTAGATGGGGTAAGTTTTTCAGGTGACCTACCCAACTCTATTGGAAATCTTAAAATGTTGTCAAGCATAGATATTTCAAAATGCAATTTCACTGGATCAGTTCCCAAGTCGATTGAAAACCTCACACAATTGGCTTACCTGGACATGTCAGGGAACATATTTAATAGTCCCATTAGTTCTATTCACTGGGAAACCCTTGTTAATCTAGAAACCCTCGATTTGAGCAATAATCAACTCTATGGGACTATTCCTTCATCTGTTGTTTCTCTTCCCAAACTGGAAAGATTAACACTATCCCACAATCGGTTCTCGGGTCAAGTCCCTGAATTTTCCAATACCTCTTCACACTTGCTTGACACCCTTGATTTGGAAAACAACAATTTGGAAGGACAAATACCAACATCTATCTTCAATCTTCAAGGGCTTACGTCTCTCCAACTTTCTTCAAACAACTTCAATGGCTTCCCTTTCTTGAGAAATCAGTCCATATTATTCTACTTCTTGGACCTTTCAAACAATCAGATTCAAGGCGAGATACCTAATTGGATATTGAGTCTCAAATCTCCTCTCTCCCTTGATCTTTCTGGCAACTCCTTGGCAAGTCTTGAAGCTCCTCTTCCAAATTCCACTTCTGCTTTATCTTCTCTGGACCTTCGTTCCAACAAGCTTCAAGATATCCATTCCTCATATTCCTTCCTTCAGCTTGATTATTTGGGATTAGCTTCTAACAAGTTGACAACATTCCCAGACTTCTTGAGAAATCAATCCCATTTAACCGACTTGGACCTCTCAGACAACCAGATTCAAGGACAGATACCCAATTGGATTTGGATTTTGGATTCTCTTCAAAAACTAAATCTTTCTTGTAACTCCTTGGAAAGTTTAGAAGCTCCTCTAGTTAATTCTACCTATGTTCTGTCATCGGTTGATCTTCATTCAAACCAACTTCAGGGACATTTCCCCTTGTTCTTAACTAGTAGTTATCTAGATTATTCAAGAAATAATTTTAGCTCTAGTATACCGACTGACATTGGTGACTTCATGATTGACTTTGATGACTTATTGGCTAATGGGTTTTACCTTTCTCTTTCAAGCAATAACTTTCACGGGGCCATTCCAAAATCAATATGCAATCTAAGGGTTGAGGTTCTTGATCTGTCCAATAATACCTTGAGTGGAAACATTCCCCAATGCTTGACTCAATTATTTTCGCTTTCAGTCATTGATTTGGGGAGAAACAACTTGAGTGGCACAATTCCGGATAATTTTCTCAACGGTTCTCGGCTACAAACTCTCGACCTCAGCAACAATCAGATACAAGGTCGATTTCCGAAATCTCTTGTCAACTGCTCAAGGTTAAAGGTTTTAGACATTGGAAATAATAACATAACTGATACTTTTCCATGCGTTTTAATGAGCATATCCACCTTGCGTGTCCTTGTTCTCCAGTCCAACAAGTTTTATGGAAGCATTGGATGTCCCAAGACCAATGACACCTGGCCTGTGCTTCAAATAATAGATTTAGCTCATAACAACTTCAGTGGTGATATGCCAGGAAGAATGTCTCTGTCATGGCATGCTATGGTGTCTAATGACGATGATTCTAGAACTAACGTTGAATATTCTTATTATCCGACGAGTAGGAATATGAAAACGCATAGTAGAGGTGGTGGTTCGTATTTTATCATTTATTATAGAGATGCAATTACGACTACCATCAAAGGTTTAGAGTTGGATGTGGTTAGGATTCTAACTATATTCACCTTGATTGACTACTCCTCCAACAAATTCAACGGATCAATACCTGAGGAAATCGGAGAGTTGAAATCACTATATGTCCTCAATTTATCCGGTAATACTTTCACCGGAAAAATCCCATCATCATTTGGTAAGATGCGACAGCTGGAGTCCTTAGATCTCTCAAAGAACCACTTAAGCGGCCAAATTCCCCCACAGTTTGCAAATCTAACTTTCCTTGCATTCTTGGATCTCTCAAATAATGAACTGGTCGGGAAGATCCCAACCAGCACTCAAATTTCAACATTTCCAAATACCTCCTTCGAAGGTAACAAAGGATTATGGGGGCCTCCTTTGACAGTGGATGCAGTATTGCCACCACCAATTTCAAATGGAAGCTCAAGTCATCCCAATTCTGGAGATGAGATTGATTGGGATGTTATCTGTGTTGAAATTGGATTTACATGTGGGTTTGGAATTGTCATCGGGTCACTTTTGTTTTGCAAAAGTTGGAGGAAATGGTATTACAGAACTATGCGTAGTATTCTGTTCAAGATATTCCCTCAGTTGGAGCAGAGATTTGGTAATCATAGAAGACACGTCTACGTAAACGTAAGGCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1096

Amino Acids

122.2

Weight (kDa)

5.31

Isoelectric Point (pI)

40.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 72 2.5e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 94 - 286 1.8e-11 Leucine-rich repeat region
LRR_8 PF13855 233 - 290 7e-06 Leucine rich repeat
LRR_8 PF13855 368 - 413 8.9e-07 Leucine rich repeat
LRR_4 PF12799 378 - 419 2.4e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 544 - 602 6.6e-07 Leucine rich repeat
LRR_8 PF13855 737 - 797 1.9e-09 Leucine rich repeat
LRR_4 PF12799 738 - 775 6.5e-08 Leucine Rich repeats (2 copies)
LRR_14 PF23598 910 - 975 2.7e-07 Leucine-rich repeat region
LRR_8 PF13855 920 - 979 1.1e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 792
AarI CACCTGC 1 cut(s) 367
Acc36I ACCTGC 1 cut(s) 367
AccB7I CCANNNNNTGG 1 cut(s) 908
AccI GTMKAC 2 cut(s) 1948, 3270
AccIII TCCGGA 1 cut(s) 2188
AciI CCGC 1 cut(s) 2868
AclI AACGTT 1 cut(s) 2544
AclWI GGATC 5 cut(s) 915, 1033, 2734, 2925, 2941
AcoI YGGCCR 1 cut(s) 2869
AcuI CTGAAG 6 cut(s) 293, 322, 669, 1613, 1862, 2452
AfaI GTAC 2 cut(s) 132, 181
AfiI CCNNNNNNNGG 8 cut(s) 322, 365, 908, 1233, 1297, 1879, 3083, 3235
AflII CTTAAG 1 cut(s) 2863
AflIII ACRYGT 3 cut(s) 1074, 3131, 3265
AhlI ACTAGT 1 cut(s) 1904
AjiI CACGTC 1 cut(s) 3268
AjnI CCWGG 3 cut(s) 1068, 2426, 2482
AjuI GAANNNNNNNTTGG 2 cut(s) 1543, 1575
Alw26I GTCTC 5 cut(s) 293, 918, 1365, 1490, 2499
AlwI GGATC 5 cut(s) 915, 1033, 2734, 2925, 2941
AlwNI CAGNNNCTG 1 cut(s) 81
Ama87I CYCGRG 1 cut(s) 1240
Aor13HI TCCGGA 1 cut(s) 2188
AoxI GGCC 5 cut(s) 664, 2040, 2429, 2869, 3014
ApeKI GCWGC 1 cut(s) 213
ArsI GACNNNNNNTTYG 2 cut(s) 896, 928
AspS9I GGNCC 6 cut(s) 665, 1435, 1579, 1714, 2040, 3014
AsuHPI GGTGA 7 cut(s) 665, 848, 965, 1976, 2486, 2683, 2785
AsuII TTCGAA 1 cut(s) 2991
AvaI CYCGRG 1 cut(s) 1240
AvaII GGWCC 3 cut(s) 1435, 1579, 1714
AxyI CCTNAGG 1 cut(s) 2736
BarI GAAGNNNNNNTAC 2 cut(s) 1308, 1340
BbsI GAAGAC 1 cut(s) 3268
BbvCI CCTCAGC 2 cut(s) 629, 2231
BbvI GCAGC 1 cut(s) 225
BccI CCATC 3 cut(s) 929, 2654, 2815
BciT130I CCWGG 3 cut(s) 1070, 2428, 2484
BcoDI GTCTC 5 cut(s) 293, 918, 1365, 1490, 2499
BcuI ACTAGT 1 cut(s) 1904
BfaI CTAG 8 cut(s) 450, 474, 1136, 1826, 1905, 1916, 1944, 2535
BfrI CTTAAG 1 cut(s) 2863
BfuAI ACCTGC 1 cut(s) 367
BglII AGATCT 2 cut(s) 825, 2845
BisI GCNGC 2 cut(s) 214, 2869
BlsI GCNGC 2 cut(s) 215, 2870
Bme1390I CCNGG 3 cut(s) 1070, 2428, 2484
Bme18I GGWCC 3 cut(s) 1435, 1579, 1714
BmeT110I CYCGRG 1 cut(s) 1240
BmgBI CACGTC 1 cut(s) 3268
BmgT120I GGNCC 6 cut(s) 665, 1435, 1579, 1714, 2040, 3014
BmiI GGNNCC 3 cut(s) 744, 2041, 3015
BmrFI CCNGG 3 cut(s) 1070, 2428, 2484
BmrI ACTGGG 2 cut(s) 593, 1126
BmsI GCATC 5 cut(s) 394, 564, 2620, 2814, 3022
BmuI ACTGGG 2 cut(s) 593, 1126
BpiI GAAGAC 1 cut(s) 3268
BplI GAGNNNNNCTC 2 cut(s) 245, 277
BpmI CTGGAG 3 cut(s) 2360, 2855, 3105
Bpu10I CCTNAGC 2 cut(s) 629, 2231
Bpu14I TTCGAA 1 cut(s) 2991
BpuEI CTTGAG 7 cut(s) 802, 1423, 1705, 2122, 2194, 2266, 3052
BsaAI YACGTR 2 cut(s) 401, 3274
BsaI GGTCTC 1 cut(s) 918
BsaJI CCNNGG 2 cut(s) 1524, 1803
BsaWI WCCGGW 4 cut(s) 739, 2188, 2780, 2795
BsaXI ACNNNNNCTCC 2 cut(s) 2693, 2723
Bsc4I CCNNNNNNNGG 8 cut(s) 322, 365, 908, 1233, 1297, 1879, 3083, 3235
Bse1I ACTGG 7 cut(s) 588, 599, 1027, 1121, 1212, 2377, 2940
Bse21I CCTNAGG 1 cut(s) 2736
Bse3DI GCAATG 1 cut(s) 104
BseAI TCCGGA 1 cut(s) 2188
BseBI CCWGG 3 cut(s) 1070, 2428, 2484
BseDI CCNNGG 2 cut(s) 1524, 1803
BseGI GGATG 8 cut(s) 60, 579, 719, 2411, 2671, 3037, 3073, 3109
BseLI CCNNNNNNNGG 8 cut(s) 322, 365, 908, 1233, 1297, 1879, 3083, 3235
BseMI GCAATG 1 cut(s) 104
BseMII CTCAG 5 cut(s) 620, 1734, 2245, 2727, 3245
BseNI ACTGG 7 cut(s) 588, 599, 1027, 1121, 1212, 2377, 2940
BseRI GAGGAG 5 cut(s) 337, 1485, 1533, 1812, 2698
BseXI GCAGC 1 cut(s) 225
BshFI GGCC 5 cut(s) 666, 2042, 2431, 2871, 3016
BsiHKCI CYCGRG 1 cut(s) 1240
BsiSI CCGG 4 cut(s) 740, 2189, 2781, 2796
BslFI GGGAC 6 cut(s) 664, 1083, 1186, 1235, 1896, 2394
BslI CCNNNNNNNGG 8 cut(s) 322, 365, 908, 1233, 1297, 1879, 3083, 3235
BsmAI GTCTC 5 cut(s) 293, 918, 1365, 1490, 2499
BsmBI CGTCTC 1 cut(s) 1365
BsmFI GGGAC 6 cut(s) 664, 1083, 1186, 1235, 1896, 2394
BsmI GAATGC 2 cut(s) 191, 2909
BsnI GGCC 5 cut(s) 666, 2042, 2431, 2871, 3016
Bso31I GGTCTC 1 cut(s) 918
BsoBI CYCGRG 1 cut(s) 1240
Bsp119I TTCGAA 1 cut(s) 2991
Bsp13I TCCGGA 1 cut(s) 2188
BspACI CCGC 1 cut(s) 2868
BspANI GGCC 5 cut(s) 666, 2042, 2431, 2871, 3016
BspCNI CTCAG 5 cut(s) 621, 1733, 2244, 2728, 3244
BspEI TCCGGA 1 cut(s) 2188
BspHI TCATGA 1 cut(s) 1971
BspLI GGNNCC 3 cut(s) 744, 2041, 3015
BspMI ACCTGC 1 cut(s) 367
BspPI GGATC 5 cut(s) 915, 1033, 2734, 2925, 2941
BspT104I TTCGAA 1 cut(s) 2991
BspTI CTTAAG 1 cut(s) 2863
BspTNI GGTCTC 1 cut(s) 918
BsrDI GCAATG 1 cut(s) 104
BsrI ACTGG 7 cut(s) 588, 599, 1027, 1121, 1212, 2377, 2940
BssECI CCNNGG 2 cut(s) 1524, 1803
BssNAI GTATAC 1 cut(s) 1949
BssT1I CCWWGG 2 cut(s) 1524, 1803
Bst1107I GTATAC 1 cut(s) 1949
Bst2UI CCWGG 3 cut(s) 1070, 2428, 2484
Bst4CI ACNGT 6 cut(s) 49, 70, 83, 2207, 2886, 3028
Bst6I CTCTTC 5 cut(s) 921, 1203, 1276, 1551, 1779
BstAFI CTTAAG 1 cut(s) 2863
BstBAI YACGTR 2 cut(s) 401, 3274
BstBI TTCGAA 1 cut(s) 2991
BstC8I GCNNGC 2 cut(s) 521, 2508
BstDEI CTNAG 7 cut(s) 629, 1720, 2066, 2231, 2736, 2842, 3231
BstEII GGTNACC 1 cut(s) 953
BstF5I GGATG 8 cut(s) 60, 579, 719, 2411, 2671, 3037, 3073, 3109
BstMAI GTCTC 5 cut(s) 293, 918, 1365, 1490, 2499
BstNI CCWGG 3 cut(s) 1070, 2428, 2484
BstNSI RCATGY 4 cut(s) 523, 1078, 2510, 3135
BstPI GGTNACC 1 cut(s) 953
BstSCI CCNGG 3 cut(s) 1068, 2426, 2482
BstSNI TACGTA 1 cut(s) 3274
BstV1I GCAGC 1 cut(s) 225
BstV2I GAAGAC 1 cut(s) 3268
BstX2I RGATCY 4 cut(s) 825, 2845, 2917, 2946
BstYI RGATCY 4 cut(s) 825, 2845, 2917, 2946
BstZ17I GTATAC 1 cut(s) 1949
Bsu36I CCTNAGG 1 cut(s) 2736
BsuRI GGCC 5 cut(s) 666, 2042, 2431, 2871, 3016
BtrI CACGTC 1 cut(s) 3268
BtsCI GGATG 8 cut(s) 60, 579, 719, 2411, 2671, 3037, 3073, 3109
BtsIMutI CAGTG 5 cut(s) 45, 1020, 1114, 2476, 3033
BveI ACCTGC 1 cut(s) 367
Cac8I GCNNGC 2 cut(s) 521, 2508
CaiI CAGNNNCTG 1 cut(s) 81
CciI TCATGA 1 cut(s) 1971
Cfr13I GGNCC 6 cut(s) 665, 1435, 1579, 1714, 2040, 3014
Csp6I GTAC 2 cut(s) 131, 180
CspCI CAANNNNNGTGG 4 cut(s) 2158, 2193, 2452, 2487
CviAII CATG 9 cut(s) 168, 264, 520, 1075, 1972, 2334, 2502, 2507, 3132
CviQI GTAC 2 cut(s) 131, 180
DdeI CTNAG 7 cut(s) 629, 1720, 2066, 2231, 2736, 2842, 3231
EaeI YGGCCR 1 cut(s) 2869
Eam1104I CTCTTC 5 cut(s) 921, 1203, 1276, 1551, 1779
EarI CTCTTC 5 cut(s) 921, 1203, 1276, 1551, 1779
Eco105I TACGTA 1 cut(s) 3274
Eco130I CCWWGG 2 cut(s) 1524, 1803
Eco31I GGTCTC 1 cut(s) 918
Eco32I GATATC 2 cut(s) 244, 1606
Eco47I GGWCC 3 cut(s) 1435, 1579, 1714
Eco57I CTGAAG 6 cut(s) 293, 322, 669, 1613, 1862, 2452
Eco81I CCTNAGG 1 cut(s) 2736
Eco88I CYCGRG 1 cut(s) 1240
Eco91I GGTNACC 1 cut(s) 953
EcoO109I RGGNCCY 2 cut(s) 665, 3014
EcoO65I GGTNACC 1 cut(s) 953
EcoRI GAATTC 1 cut(s) 172
EcoRII CCWGG 3 cut(s) 1068, 2426, 2482
EcoRV GATATC 2 cut(s) 244, 1606
EcoT14I CCWWGG 2 cut(s) 1524, 1803
ErhI CCWWGG 2 cut(s) 1524, 1803
Esp3I CGTCTC 1 cut(s) 1365
FaeI CATG 9 cut(s) 171, 267, 523, 1078, 1975, 2337, 2505, 2510, 3135
FalI AAGNNNNNCTT 6 cut(s) 642, 674, 1530, 1562, 2846, 2878
FaqI GGGAC 6 cut(s) 664, 1083, 1186, 1235, 1896, 2394
FatI CATG 9 cut(s) 167, 263, 519, 1074, 1971, 2333, 2501, 2506, 3131
FblI GTMKAC 2 cut(s) 1948, 3270
Fnu4HI GCNGC 2 cut(s) 214, 2869
FokI GGATG 8 cut(s) 47, 586, 706, 2418, 2678, 3044, 3060, 3116
Fsp4HI GCNGC 2 cut(s) 214, 2869
FspBI CTAG 8 cut(s) 450, 474, 1136, 1826, 1905, 1916, 1944, 2535
GluI GCNGC 2 cut(s) 214, 2869
GsuI CTGGAG 3 cut(s) 2360, 2855, 3105
HaeIII GGCC 5 cut(s) 666, 2042, 2431, 2871, 3016
HapII CCGG 4 cut(s) 740, 2189, 2781, 2796
Hin1II CATG 9 cut(s) 171, 267, 523, 1078, 1975, 2337, 2505, 2510, 3135
HincII GTYRAC 2 cut(s) 1665, 2275
HindII GTYRAC 2 cut(s) 1665, 2275
HindIII AAGCTT 4 cut(s) 158, 371, 689, 1595
HpaII CCGG 4 cut(s) 740, 2189, 2781, 2796
HphI GGTGA 7 cut(s) 665, 848, 965, 1976, 2486, 2683, 2785
Hpy166II GTNNAC 6 cut(s) 73, 1665, 1949, 2275, 3271, 3277
Hpy8I GTNNAC 6 cut(s) 73, 1665, 1949, 2275, 3271, 3277
Hpy99I CGWCG 1 cut(s) 2569
HpyCH4III ACNGT 6 cut(s) 49, 70, 83, 2207, 2886, 3028
HpyCH4IV ACGT 6 cut(s) 400, 1358, 2544, 3267, 3273, 3279
HpyF3I CTNAG 7 cut(s) 629, 1720, 2066, 2231, 2736, 2842, 3231
HpySE526I ACGT 6 cut(s) 400, 1358, 2544, 3267, 3273, 3279
Hsp92II CATG 9 cut(s) 171, 267, 523, 1078, 1975, 2337, 2505, 2510, 3135
Kpn2I TCCGGA 1 cut(s) 2188
LmnI GCTCC 6 cut(s) 114, 350, 742, 1546, 1825, 3238
Lsp1109I GCAGC 1 cut(s) 225
LweI GCATC 5 cut(s) 394, 564, 2620, 2814, 3022
MaeI CTAG 8 cut(s) 450, 474, 1136, 1826, 1905, 1916, 1944, 2535
MaeII ACGT 6 cut(s) 400, 1358, 2544, 3267, 3273, 3279
MaeIII GTNAC 8 cut(s) 49, 205, 590, 953, 1796, 1964, 2996, 3156
MfeI CAATTG 2 cut(s) 1058, 1750
MflI RGATCY 4 cut(s) 825, 2845, 2917, 2946
MlyI GAGTC 7 cut(s) 263, 686, 759, 793, 1492, 2122, 2846
MmeI TCCRAC 9 cut(s) 747, 1390, 1614, 2406, 2588, 2643, 2736, 3158, 3216
MroI TCCGGA 1 cut(s) 2188
MspA1I CMGCKG 1 cut(s) 2833
MspCI CTTAAG 1 cut(s) 2863
MspI CCGG 4 cut(s) 740, 2189, 2781, 2796
MspR9I CCNGG 3 cut(s) 1070, 2428, 2484
MunI CAATTG 2 cut(s) 1058, 1750
Mva1269I GAATGC 2 cut(s) 191, 2909
MvaI CCWGG 3 cut(s) 1070, 2428, 2484
NlaIII CATG 9 cut(s) 171, 267, 523, 1078, 1975, 2337, 2505, 2510, 3135
NlaIV GGNNCC 3 cut(s) 744, 2041, 3015
NmeAIII GCCGAG 1 cut(s) 2191
NmuCI GTSAC 4 cut(s) 590, 953, 1964, 3156
NspI RCATGY 4 cut(s) 523, 1078, 2510, 3135
NspV TTCGAA 1 cut(s) 2991
PaeI GCATGC 2 cut(s) 523, 2510
PagI TCATGA 1 cut(s) 1971
PaqCI CACCTGC 1 cut(s) 367
PciI ACATGT 2 cut(s) 1074, 3131
PctI GAATGC 2 cut(s) 191, 2909
PfeI GAWTC 6 cut(s) 140, 1453, 1732, 1769, 2531, 2677
PflMI CCANNNNNTGG 1 cut(s) 908
PkrI GCNGC 2 cut(s) 215, 2870
PleI GAGTC 7 cut(s) 262, 685, 758, 792, 1491, 2122, 2845
PpsI GAGTC 7 cut(s) 262, 685, 758, 792, 1491, 2122, 2845
Ppu21I YACGTR 2 cut(s) 401, 3274
PscI ACATGT 2 cut(s) 1074, 3131
PsiI TTATAA 1 cut(s) 792
Psp1406I AACGTT 1 cut(s) 2544
Psp6I CCWGG 3 cut(s) 1068, 2426, 2482
PspEI GGTNACC 1 cut(s) 953
PspGI CCWGG 3 cut(s) 1068, 2426, 2482
PspN4I GGNNCC 3 cut(s) 744, 2041, 3015
PspPI GGNCC 6 cut(s) 665, 1435, 1579, 1714, 2040, 3014
PstNI CAGNNNCTG 1 cut(s) 81
PsuI RGATCY 4 cut(s) 825, 2845, 2917, 2946
PvuII CAGCTG 1 cut(s) 2833
RsaI GTAC 2 cut(s) 132, 181
RsaNI GTAC 2 cut(s) 131, 180
SatI GCNGC 2 cut(s) 214, 2869
Sau96I GGNCC 6 cut(s) 665, 1435, 1579, 1714, 2040, 3014
SchI GAGTC 7 cut(s) 263, 686, 759, 793, 1492, 2122, 2846
ScrFI CCNGG 3 cut(s) 1070, 2428, 2484
SfaNI GCATC 5 cut(s) 394, 564, 2620, 2814, 3022
SfuI TTCGAA 1 cut(s) 2991
SinI GGWCC 3 cut(s) 1435, 1579, 1714
SmlI CTYRAG 8 cut(s) 781, 1402, 1684, 2101, 2173, 2281, 2863, 3067
SmoI CTYRAG 8 cut(s) 781, 1402, 1684, 2101, 2173, 2281, 2863, 3067
SnaBI TACGTA 1 cut(s) 3274
SpeI ACTAGT 1 cut(s) 1904
SphI GCATGC 2 cut(s) 523, 2510
SsiI CCGC 1 cut(s) 2868
SspI AATATT 1 cut(s) 2552
SspMI CTAG 8 cut(s) 450, 474, 1136, 1826, 1905, 1916, 1944, 2535
StyD4I CCNGG 3 cut(s) 1068, 2426, 2482
StyI CCWWGG 2 cut(s) 1524, 1803
TaaI ACNGT 6 cut(s) 49, 70, 83, 2207, 2886, 3028
TaiI ACGT 6 cut(s) 403, 1361, 2547, 3270, 3276, 3282
TaqI TCGA 7 cut(s) 176, 919, 1040, 1146, 2226, 2254, 2991
TatI WGTACW 1 cut(s) 130
TauI GCSGC 1 cut(s) 2871
TfiI GAWTC 6 cut(s) 140, 1453, 1732, 1769, 2531, 2677
TscAI CASTG 5 cut(s) 52, 1027, 1121, 2476, 3033
TseFI GTSAC 4 cut(s) 590, 953, 1964, 3156
TseI GCWGC 1 cut(s) 213
Tsp45I GTSAC 4 cut(s) 590, 953, 1964, 3156
TspDTI ATGAA 6 cut(s) 876, 1173, 1853, 1960, 2594, 2946
TspGWI ACGGA 1 cut(s) 2739
TspRI CASTG 5 cut(s) 52, 1027, 1121, 2476, 3033
Van91I CCANNNNNTGG 1 cut(s) 908
Vha464I CTTAAG 1 cut(s) 2863
VpaK11BI GGWCC 3 cut(s) 1435, 1579, 1714
XbaI TCTAGA 4 cut(s) 473, 1135, 1915, 2534
XceI RCATGY 4 cut(s) 523, 1078, 2510, 3135
XmiI GTMKAC 2 cut(s) 1948, 3270
XspI CTAG 8 cut(s) 450, 474, 1136, 1826, 1905, 1916, 1944, 2535
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.