Rorug03G0054200

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
4188834 .. 4190592
1759 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0054200.1

Sequence Viewer

Length: 882 bp
ATGAAAGTTCGAAATCGATTTTGCGTAGCAGAGCATCCCCTGTTTGTGAAAAAGATGGACCAAATGGGGAACTGGATGGATCAGCAAGGACATGGGCAACCCCAATCGATGGGGATGGTAGGTAGTGGAGGTCAGTTGGCATATGGGACTGCTCCGTATCAGCATACTCAAATGGTAGGGAGTCCAAATCCTGCTACAGTTGGTGCGCCAGTTGGAGGCATTCAATCTAGTAGTCAATCTGCCGGAGCTCAGCTTCAACAGCATCAACTTGCTTATCAGCACATTCACCAGCAGCAGCAGCAACAACTTCAACAACAACTGCAGAGTTTCTGGGCAAATCAGTTTCAAGAGATTGAGAAGGTAACTGATTTCAAGAACCATAGCCTTCCTCTAGCAAGGATCAAGAAGATTATGAAAGCTGATGAGGATGTGAGAATGATATCAGCTGAGGCACCTGTGATCTTTGCAAGGGCATGTGAAATGTTCATCTTGGAGTTGACCTTGCGGTCTTGGAATCACACAGAAGAGAATAAAAGGAGGACACTTCAAAAGAATGACATTGCAGCTGCAATCACGAGGACTGATATCTTTGATTTCTTGGTAGACATCGTGCCGAGAGAGGATCTGAAAGATGAAGTCCTTGCATCCATTCCAAGGGGAACGGTTTCTGTTGGGGCTGCTGATGCACTTCCTCCATACTGCTATATGCCACCTCAGCATGGACCTCAGGTGGGGGCTCCTGGGATGATCATGGGCAAGCCTATGATGGACCCATCTATGTATGGGCAACAGTCTCACCCCTACATGGCTCCGCAAATGTGGCCGCAAGCACCGGAGCAGCAGCAGCAGCAGCAACAGCAACAGTCACCATCTGATCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

293

Amino Acids

32.87

Weight (kDa)

6.4

Isoelectric Point (pI)

67.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Histone PF00125 119 - 191 1.5e-17 Core histone H2A/H2B/H3/H4 domain
CBFD_NFYB_HMF PF00808 128 - 191 3.9e-17 Histone-like transcription factor (CBF/NF-Y) and archaeal histone
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 505
AccB1I GGYRCC 1 cut(s) 451
AccB7I CCANNNNNTGG 1 cut(s) 109
AccI GTMKAC 1 cut(s) 603
AciI CCGC 3 cut(s) 505, 812, 824
AclWI GGATC 3 cut(s) 87, 407, 630
AcoI YGGCCR 1 cut(s) 821
AfiI CCNNNNNNNGG 6 cut(s) 109, 215, 654, 719, 731, 805
AgsI TTSAA 6 cut(s) 224, 257, 311, 347, 373, 548
AjnI CCWGG 1 cut(s) 739
AluBI AGCT 5 cut(s) 248, 253, 419, 446, 566
AluI AGCT 5 cut(s) 248, 253, 419, 446, 566
Alw21I GWGCWC 1 cut(s) 250
Alw26I GTCTC 1 cut(s) 798
AlwI GGATC 3 cut(s) 87, 407, 630
AoxI GGCC 1 cut(s) 821
Asp700I GAANNNNTTC 1 cut(s) 664
AspLEI GCGC 1 cut(s) 208
AspS9I GGNCC 3 cut(s) 58, 722, 769
AsuHPI GGTGA 3 cut(s) 278, 788, 858
AsuII TTCGAA 1 cut(s) 10
AvaII GGWCC 3 cut(s) 58, 722, 769
AxyI CCTNAGG 1 cut(s) 726
BanI GGYRCC 1 cut(s) 451
BanII GRGCYC 2 cut(s) 250, 739
BauI CACGAG 1 cut(s) 574
Bbv12I GWGCWC 1 cut(s) 250
BbvCI CCTCAGC 2 cut(s) 447, 714
BccI CCATC 7 cut(s) 49, 70, 103, 109, 760, 781, 877
BciT130I CCWGG 1 cut(s) 741
BclI TGATCA 2 cut(s) 747, 874
BcoDI GTCTC 1 cut(s) 798
BfaI CTAG 2 cut(s) 228, 392
BfmI CTRYAG 2 cut(s) 195, 320
BlpI GCTNAGC 1 cut(s) 249
Bme1390I CCNGG 1 cut(s) 741
Bme18I GGWCC 3 cut(s) 58, 722, 769
BmgT120I GGNCC 3 cut(s) 58, 722, 769
BmiI GGNNCC 4 cut(s) 453, 738, 771, 810
BmrFI CCNGG 1 cut(s) 741
BmsI GCATC 4 cut(s) 43, 271, 653, 673
Bpu10I CCTNAGC 2 cut(s) 447, 714
Bpu1102I GCTNAGC 1 cut(s) 249
Bpu14I TTCGAA 1 cut(s) 10
Bsa29I ATCGAT 2 cut(s) 16, 107
BsaJI CCNNGG 2 cut(s) 653, 740
BsaWI WCCGGW 1 cut(s) 832
Bsc4I CCNNNNNNNGG 6 cut(s) 109, 215, 654, 719, 731, 805
Bse1I ACTGG 2 cut(s) 77, 209
Bse21I CCTNAGG 1 cut(s) 726
Bse3DI GCAATG 1 cut(s) 558
BseBI CCWGG 1 cut(s) 741
BseCI ATCGAT 2 cut(s) 16, 107
BseDI CCNNGG 2 cut(s) 653, 740
BseGI GGATG 6 cut(s) 34, 81, 120, 433, 644, 750
BseLI CCNNNNNNNGG 6 cut(s) 109, 215, 654, 719, 731, 805
BseMI GCAATG 1 cut(s) 558
BseMII CTCAG 4 cut(s) 263, 438, 728, 740
BseNI ACTGG 2 cut(s) 77, 209
BshFI GGCC 1 cut(s) 823
BshNI GGYRCC 1 cut(s) 451
BshVI ATCGAT 2 cut(s) 16, 107
BsiHKAI GWGCWC 1 cut(s) 250
BsiSI CCGG 2 cut(s) 243, 833
BslFI GGGAC 1 cut(s) 160
BslI CCNNNNNNNGG 6 cut(s) 109, 215, 654, 719, 731, 805
BsmAI GTCTC 1 cut(s) 798
BsmFI GGGAC 1 cut(s) 160
BsmI GAATGC 1 cut(s) 219
BsnI GGCC 1 cut(s) 823
Bsp119I TTCGAA 1 cut(s) 10
Bsp1286I GDGCHC 2 cut(s) 250, 739
Bsp143I GATC 6 cut(s) 79, 399, 459, 622, 747, 874
Bsp1720I GCTNAGC 1 cut(s) 249
BspACI CCGC 3 cut(s) 505, 812, 824
BspANI GGCC 1 cut(s) 823
BspCNI CTCAG 4 cut(s) 262, 439, 727, 739
BspDI ATCGAT 2 cut(s) 16, 107
BspLI GGNNCC 4 cut(s) 453, 738, 771, 810
BspMAI CTGCAG 1 cut(s) 324
BspPI GGATC 3 cut(s) 87, 407, 630
BspT104I TTCGAA 1 cut(s) 10
BspT107I GGYRCC 1 cut(s) 451
BsrDI GCAATG 1 cut(s) 558
BsrI ACTGG 2 cut(s) 77, 209
BssECI CCNNGG 2 cut(s) 653, 740
BssMI GATC 6 cut(s) 79, 399, 459, 622, 747, 874
BssSI CACGAG 1 cut(s) 574
BssT1I CCWWGG 1 cut(s) 653
Bst2BI CACGAG 1 cut(s) 574
Bst2UI CCWGG 1 cut(s) 741
Bst4CI ACNGT 4 cut(s) 199, 664, 792, 864
Bst6I CTCTTC 1 cut(s) 519
BstBI TTCGAA 1 cut(s) 10
BstC8I GCNNGC 2 cut(s) 758, 828
BstDEI CTNAG 4 cut(s) 249, 447, 714, 726
BstF5I GGATG 6 cut(s) 34, 81, 120, 433, 644, 750
BstHHI GCGC 1 cut(s) 208
BstKTI GATC 6 cut(s) 82, 402, 462, 625, 750, 877
BstMAI GTCTC 1 cut(s) 798
BstMBI GATC 6 cut(s) 79, 399, 459, 622, 747, 874
BstMWI GCNNNNNNNGC 9 cut(s) 259, 298, 683, 715, 820, 844, 847, 850, 856
BstNI CCWGG 1 cut(s) 741
BstNSI RCATGY 1 cut(s) 477
BstSCI CCNGG 1 cut(s) 739
BstSFI CTRYAG 2 cut(s) 195, 320
BstX2I RGATCY 1 cut(s) 622
BstYI RGATCY 1 cut(s) 622
Bsu15I ATCGAT 2 cut(s) 16, 107
Bsu36I CCTNAGG 1 cut(s) 726
BsuRI GGCC 1 cut(s) 823
BsuTUI ATCGAT 2 cut(s) 16, 107
BtsCI GGATG 6 cut(s) 34, 81, 120, 433, 644, 750
Cac8I GCNNGC 2 cut(s) 758, 828
CfoI GCGC 1 cut(s) 208
Cfr13I GGNCC 3 cut(s) 58, 722, 769
ClaI ATCGAT 2 cut(s) 16, 107
CviAII CATG 5 cut(s) 92, 474, 719, 751, 805
DdeI CTNAG 4 cut(s) 249, 447, 714, 726
DpnI GATC 6 cut(s) 81, 401, 461, 624, 749, 876
DpnII GATC 6 cut(s) 79, 399, 459, 622, 747, 874
DrdI GACNNNNNNGTC 1 cut(s) 505
DseDI GACNNNNNNGTC 1 cut(s) 505
EaeI YGGCCR 1 cut(s) 821
Eam1104I CTCTTC 1 cut(s) 519
EarI CTCTTC 1 cut(s) 519
Ecl136II GAGCTC 1 cut(s) 248
Eco130I CCWWGG 1 cut(s) 653
Eco24I GRGCYC 2 cut(s) 250, 739
Eco32I GATATC 2 cut(s) 441, 586
Eco47I GGWCC 3 cut(s) 58, 722, 769
Eco53kI GAGCTC 1 cut(s) 248
Eco81I CCTNAGG 1 cut(s) 726
EcoICRI GAGCTC 1 cut(s) 248
EcoRII CCWGG 1 cut(s) 739
EcoRV GATATC 2 cut(s) 441, 586
EcoT14I CCWWGG 1 cut(s) 653
EcoT38I GRGCYC 2 cut(s) 250, 739
ErhI CCWWGG 1 cut(s) 653
FaeI CATG 5 cut(s) 95, 477, 722, 754, 808
FaqI GGGAC 1 cut(s) 160
FatI CATG 5 cut(s) 91, 473, 718, 750, 804
FauNDI CATATG 1 cut(s) 142
FbaI TGATCA 2 cut(s) 747, 874
FblI GTMKAC 1 cut(s) 603
FokI GGATG 6 cut(s) 21, 88, 127, 440, 631, 757
FriOI GRGCYC 2 cut(s) 250, 739
FspBI CTAG 2 cut(s) 228, 392
GlaI GCGC 1 cut(s) 207
HaeIII GGCC 1 cut(s) 823
HapII CCGG 2 cut(s) 243, 833
HhaI GCGC 1 cut(s) 208
Hin1II CATG 5 cut(s) 95, 477, 722, 754, 808
Hin6I GCGC 1 cut(s) 206
HinP1I GCGC 1 cut(s) 206
HincII GTYRAC 1 cut(s) 498
HindII GTYRAC 1 cut(s) 498
HinfI GANTC 2 cut(s) 181, 514
HpaII CCGG 2 cut(s) 243, 833
HphI GGTGA 3 cut(s) 278, 788, 858
Hpy166II GTNNAC 2 cut(s) 498, 604
Hpy188I TCNGA 2 cut(s) 627, 874
Hpy188III TCNNGA 4 cut(s) 347, 373, 403, 574
Hpy8I GTNNAC 2 cut(s) 498, 604
HpyAV CCTTC 2 cut(s) 352, 395
HpyCH4III ACNGT 4 cut(s) 199, 664, 792, 864
HpyCH4V TGCA 6 cut(s) 322, 467, 563, 569, 644, 686
HpyF10VI GCNNNNNNNGC 9 cut(s) 259, 298, 683, 715, 820, 844, 847, 850, 856
HpyF3I CTNAG 4 cut(s) 249, 447, 714, 726
Hsp92II CATG 5 cut(s) 95, 477, 722, 754, 808
HspAI GCGC 1 cut(s) 206
Ksp22I TGATCA 2 cut(s) 747, 874
Kzo9I GATC 6 cut(s) 79, 399, 459, 622, 747, 874
LmnI GCTCC 5 cut(s) 157, 245, 742, 814, 835
LweI GCATC 4 cut(s) 43, 271, 653, 673
MaeI CTAG 2 cut(s) 228, 392
MaeIII GTNAC 2 cut(s) 361, 864
MalI GATC 6 cut(s) 81, 401, 461, 624, 749, 876
MboI GATC 6 cut(s) 79, 399, 459, 622, 747, 874
MboII GAAGA 2 cut(s) 418, 536
MflI RGATCY 1 cut(s) 622
MhlI GDGCHC 2 cut(s) 250, 739
MlyI GAGTC 1 cut(s) 190
MmeI TCCRAC 1 cut(s) 193
MroXI GAANNNNTTC 1 cut(s) 664
MspA1I CMGCKG 2 cut(s) 446, 566
MspI CCGG 2 cut(s) 243, 833
MspR9I CCNGG 1 cut(s) 741
Mva1269I GAATGC 1 cut(s) 219
MvaI CCWGG 1 cut(s) 741
MwoI GCNNNNNNNGC 9 cut(s) 259, 298, 683, 715, 820, 844, 847, 850, 856
NdeI CATATG 1 cut(s) 142
NdeII GATC 6 cut(s) 79, 399, 459, 622, 747, 874
NlaIII CATG 5 cut(s) 95, 477, 722, 754, 808
NlaIV GGNNCC 4 cut(s) 453, 738, 771, 810
NmeAIII GCCGAG 1 cut(s) 639
NmuCI GTSAC 1 cut(s) 864
NspI RCATGY 1 cut(s) 477
NspV TTCGAA 1 cut(s) 10
PctI GAATGC 1 cut(s) 219
PdmI GAANNNNTTC 1 cut(s) 664
PfeI GAWTC 1 cut(s) 514
PflMI CCANNNNNTGG 1 cut(s) 109
PleI GAGTC 1 cut(s) 189
PpsI GAGTC 1 cut(s) 189
Psp124BI GAGCTC 1 cut(s) 250
Psp6I CCWGG 1 cut(s) 739
PspGI CCWGG 1 cut(s) 739
PspN4I GGNNCC 4 cut(s) 453, 738, 771, 810
PspPI GGNCC 3 cut(s) 58, 722, 769
PstI CTGCAG 1 cut(s) 324
PsuI RGATCY 1 cut(s) 622
PvuII CAGCTG 2 cut(s) 446, 566
SacI GAGCTC 1 cut(s) 250
Sau3AI GATC 6 cut(s) 79, 399, 459, 622, 747, 874
Sau96I GGNCC 3 cut(s) 58, 722, 769
SchI GAGTC 1 cut(s) 190
ScrFI CCNGG 1 cut(s) 741
SduI GDGCHC 2 cut(s) 250, 739
SfaNI GCATC 4 cut(s) 43, 271, 653, 673
SfcI CTRYAG 2 cut(s) 195, 320
SfuI TTCGAA 1 cut(s) 10
SinI GGWCC 3 cut(s) 58, 722, 769
SsiI CCGC 3 cut(s) 505, 812, 824
SspMI CTAG 2 cut(s) 228, 392
SstI GAGCTC 1 cut(s) 250
StyD4I CCNGG 1 cut(s) 739
StyI CCWWGG 1 cut(s) 653
TaaI ACNGT 4 cut(s) 199, 664, 792, 864
TaqI TCGA 3 cut(s) 10, 16, 107
TauI GCSGC 1 cut(s) 826
TfiI GAWTC 1 cut(s) 514
TseFI GTSAC 1 cut(s) 864
Tsp45I GTSAC 1 cut(s) 864
TspDTI ATGAA 4 cut(s) 17, 428, 475, 648
TspGWI ACGGA 1 cut(s) 144
Van91I CCANNNNNTGG 1 cut(s) 109
VpaK11BI GGWCC 3 cut(s) 58, 722, 769
XceI RCATGY 1 cut(s) 477
XmiI GTMKAC 1 cut(s) 603
XmnI GAANNNNTTC 1 cut(s) 664
XspI CTAG 2 cut(s) 228, 392
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.