RLG00000023639

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0000047
Physical Location & Seq
Reverse (-)
26343691 .. 26346852
3162 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023639

Sequence Viewer

Length: 2355 bp
ATGCCCACTCTGTTCCTCCATGTCTTCCTTTTCTTATTCACCACCATTGTTACTAACCTCATCCCCGCAGTTCACAGCAACTGTATTGAAGCCCAGCAACAATCATTGCTCAATTTCAAGAAAAGTCTTGAATTTGATTCTTCCGAATCCTCCAAGCTTATCACATGGAATTCGAGTACCGACTGCTGTTCTTGGCTCGGTGTAACTTGCAGCACTAGTGGGCGTGTTGTCAGACTTGACCTCAGCGGAGAGCGTTTCTCATGCAACATTGACAATTCCAGCAGTCTTTTCCAACTTCAACATCTTCAGAGCCTCAATTTGGCCGAGAACAACTTCAATGGCTCTGCAATTCCATCTGCAATTGGCAAGCTTGCAAATTTGAGGTATGTGAATTTAAGTGGAGCTGATTTTTCTGGGCAAATTCCCATTGAGGTTGCACGCCTGACAAGGCTTCATTCTCTATCCATGTTAATATTGGATCGCAACTACATCTCTAGTCCTGTTCCAAAATTCTTTGCCAATTTTTCAAGCTTGATTTCCTTGAGTCTCTCTGATTGTAACTTGCATGGGGCATTTCCCAAACAGATATTCCAGATACCTTCACTACAGTTTGTTGACCTATATGGTAATTCAGAGCTTCGTGGTTCCTTACCGGAGTTTCCAAAGAATGGATCTCTCGAATTCCTAGTCCTTAGCGGTACTAAATTTTCAGGAGTCTTGCCGGACTCTCTTGGCAACCTTAAATTGCTGTCTAGATTAGATCTTTCAGACTGCAATTTCACAGGAACAGTTCCAAAGTCACTGGCAAACCTAACACAATTGGAGGATTTGGACTTGTCATCCAACAATTTTTCTAGTCCAATTAATTCTATTCAATGGGACAAACTCATCAAGCTTGACAGTCTCCACTTGGCCAACAATCTGCTCTACGGGAGTATTCCATTGTCGCCCTTTTCTATTCCCTTGCTGCAGAGCTTAATACTTTCTGGAAATCACTTCTCTGGTCAATTGCTTGAATTTTCTAATGTCTCTTCGTACTTGCTCTCTAGTATACCAATTGACATTGGTGATTTCATTTCTTCCACGGCCTACCTTTCTCTTTCAAGCAGTAACTTGTTTGGGGAAATTCCAAAATCAATATGCAATGCAAGTGTTGTACTTCTTGATCTCTCTAATAACTCTTTGAGTGGAATCATTCCCCAGTGCTTGACTCAGACTACTCTTTCTGTCCTTGATTTGAGGAGAAACAACCTTACTGGATCTATCCCTGATACTTTTCTTGAAGGTTGTGATTTGGAAACTCTATCTCTGAGCAGAAATCAGATACAAGGTCAATTTCCAAAATCTCTAGCCAATTGTTCAAGGTTAGAGGTTTTAGACCTTGGAATCAATCAAATAACAGATGCCTTTCCCTGCCCGTTGAAGACCATATCCACCTTGCGTGTCCTTATGTTGCGATCCAACAAATTTTATGGACCCATTGGGTGTCCTGAGACCAATGGCACCTGGCCGGAGCTTCAAATCATAGACTTGGCTCATAACAGTTTCAATGGTGAAATACCAGGTACATCATTGACAACATGGCAGGCAATGATGGTTAATGCAGATAAGATCGGATATTACCTTAGCTTTTCGTGGAGACCAGGCGGTTCATTTAGGCTCGCAATTCACTATGGAGATGCAGTAACAACTACAAGCAAAGGTCTAGGGACGGATCTTGTAAAAATTTTATCTAGCTTCAATTCGATTGACTTCTCTGCTAACAAGTTCAGTGGAACAATACCCAAGGAAATAGGCCAACTGAGAACATTATATGCCCTCAATCTATCCAGCAATGCTTTCACAGGCGAAATCCCATCATCCTTTGGTAACATGAGAAGCATAGAGTCCTTAGACCTCTCACAGAACCACCTGAGAGGCCAAATTCCACCACAGTTTGCAAATCTCAATTTCCTTTCGCACTTGAATGTCTCATATAATCAACTGACGGGAAAGATTCCAACCAGCACTCAGTTTTCCACATTTCCAAATACCTCCTTCGAGGGTAACAAAGGATTATGGGGGCCTCCTCTGACATCGGATACAGCAATCGTATTGCCACCTCCGACGTTAAATGAAAGCTCAAGTGATCCGAATTCTGGAGATGAGATTGATTGGAATGTTATCAGTGCTGAAATTGGATTTACATGTGGGTTTGGAATTGTCGTCGGGTCACTCCTGTTTTGCAAGAGATGGAGGAAATGGTATTACAGAGCTATGTTTAAAATCCTGTTCAAGATATTCCCTCAGCTGGAACAAAGATTTGGTATTCACAGAAGGCATGTTTACATAAATCAAAGGTATTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

785

Amino Acids

86.56

Weight (kDa)

6.51

Isoelectric Point (pI)

34.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 71 2.1e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 86 - 208 2.9e-08 Leucine-rich repeat region
LRR_8 PF13855 153 - 210 4.6e-06 Leucine rich repeat
LRR_8 PF13855 226 - 284 7.2e-06 Leucine rich repeat
LRR_8 PF13855 407 - 466 1.2e-08 Leucine rich repeat
LRR_4 PF12799 432 - 468 5.2e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 602 - 662 2.1e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1502
AccB7I CCANNNNNTGG 1 cut(s) 668
AccI GTMKAC 1 cut(s) 1051
AciI CCGC 4 cut(s) 66, 246, 696, 1647
AclWI GGATC 6 cut(s) 486, 679, 1267, 1452, 1722, 2123
AcoI YGGCCR 3 cut(s) 321, 912, 1508
AcuI CTGAAG 1 cut(s) 290
AfaI GTAC 5 cut(s) 178, 700, 1037, 1158, 1567
AfiI CCNNNNNNNGG 4 cut(s) 319, 668, 2138, 2290
AflIII ACRYGT 1 cut(s) 2186
AhlI ACTAGT 1 cut(s) 215
AjnI CCWGG 3 cut(s) 1505, 1561, 1642
AjuI GAANNNNNNNTTGG 4 cut(s) 572, 604, 2286, 2318
Alw26I GTCTC 7 cut(s) 551, 908, 1033, 1487, 1633, 1975, 2341
AlwI GGATC 6 cut(s) 486, 679, 1267, 1452, 1722, 2123
AlwNI CAGNNNCTG 1 cut(s) 81
AoxI GGCC 7 cut(s) 321, 912, 1086, 1508, 1795, 1918, 2063
ApeKI GCWGC 2 cut(s) 210, 967
ArsI GACNNNNNNTTYG 2 cut(s) 672, 704
AseI ATTAAT 1 cut(s) 864
Asp700I GAANNNNTTC 1 cut(s) 332
AspS9I GGNCC 2 cut(s) 1475, 2063
AsuHPI GGTGA 3 cut(s) 31, 1079, 1565
AvaII GGWCC 1 cut(s) 1475
BalI TGGCCA 1 cut(s) 914
BanI GGYRCC 1 cut(s) 1502
BbsI GAAGAC 2 cut(s) 16, 1430
BbvCI CCTCAGC 2 cut(s) 242, 2286
BbvI GCAGC 2 cut(s) 222, 954
BccI CCATC 4 cut(s) 361, 1588, 1864, 2226
BceAI ACGGC 1 cut(s) 1101
BciT130I CCWGG 3 cut(s) 1507, 1563, 1644
BciVI GTATCC 1 cut(s) 2074
BcoDI GTCTC 7 cut(s) 551, 908, 1033, 1487, 1633, 1975, 2341
BcuI ACTAGT 1 cut(s) 215
BfaI CTAG 9 cut(s) 216, 495, 686, 753, 855, 1047, 1349, 1706, 1734
BfmI CTRYAG 2 cut(s) 605, 968
BfuI GTATCC 1 cut(s) 2074
BglII AGATCT 1 cut(s) 760
BisI GCNGC 2 cut(s) 211, 968
BlsI GCNGC 2 cut(s) 212, 969
Bme1390I CCNGG 3 cut(s) 1507, 1563, 1644
Bme18I GGWCC 1 cut(s) 1475
BmgT120I GGNCC 2 cut(s) 1475, 2063
BmiI GGNNCC 4 cut(s) 646, 1477, 1504, 2064
BmrFI CCNGG 3 cut(s) 1507, 1563, 1644
BmrI ACTGGG 1 cut(s) 1195
BmsI GCATC 2 cut(s) 1393, 1669
BmuI ACTGGG 1 cut(s) 1195
BpiI GAAGAC 2 cut(s) 16, 1430
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 1 cut(s) 2160
Bpu10I CCTNAGC 4 cut(s) 242, 692, 1625, 2286
BpuEI CTTGAG 2 cut(s) 562, 2107
BsaI GGTCTC 2 cut(s) 1487, 1633
BsaJI CCNNGG 3 cut(s) 1083, 1381, 1785
BsaWI WCCGGW 1 cut(s) 652
BsaXI ACNNNNNCTCC 2 cut(s) 1668, 1698
Bsc4I CCNNNNNNNGG 4 cut(s) 319, 668, 2138, 2290
Bse1I ACTGG 3 cut(s) 807, 1201, 1261
Bse3DI GCAATG 4 cut(s) 104, 1150, 1596, 1840
BseBI CCWGG 3 cut(s) 1507, 1563, 1644
BseDI CCNNGG 3 cut(s) 1083, 1381, 1785
BseGI GGATG 3 cut(s) 60, 839, 1859
BseLI CCNNNNNNNGG 4 cut(s) 319, 668, 2138, 2290
BseMI GCAATG 4 cut(s) 104, 1150, 1596, 1840
BseMII CTCAG 8 cut(s) 256, 1226, 1301, 1482, 1793, 1904, 2024, 2300
BseNI ACTGG 3 cut(s) 807, 1201, 1261
BseRI GAGGAG 2 cut(s) 1255, 2058
BseXI GCAGC 2 cut(s) 222, 954
BseYI CCCAGC 1 cut(s) 93
BshFI GGCC 7 cut(s) 323, 914, 1088, 1510, 1797, 1920, 2065
BshNI GGYRCC 1 cut(s) 1502
BsiSI CCGG 3 cut(s) 653, 722, 1511
BslFI GGGAC 2 cut(s) 893, 1723
BslI CCNNNNNNNGG 4 cut(s) 319, 668, 2138, 2290
BsmAI GTCTC 7 cut(s) 551, 908, 1033, 1487, 1633, 1975, 2341
BsmBI CGTCTC 1 cut(s) 2341
BsmFI GGGAC 2 cut(s) 893, 1723
BsnI GGCC 7 cut(s) 323, 914, 1088, 1510, 1797, 1920, 2065
Bso31I GGTCTC 2 cut(s) 1487, 1633
Bsp143I GATC 9 cut(s) 478, 671, 760, 1165, 1259, 1457, 1611, 1714, 2128
BspACI CCGC 4 cut(s) 66, 246, 696, 1647
BspANI GGCC 7 cut(s) 323, 914, 1088, 1510, 1797, 1920, 2065
BspCNI CTCAG 8 cut(s) 255, 1225, 1302, 1483, 1794, 1905, 2023, 2299
BspLI GGNNCC 4 cut(s) 646, 1477, 1504, 2064
BspMAI CTGCAG 1 cut(s) 972
BspPI GGATC 6 cut(s) 486, 679, 1267, 1452, 1722, 2123
BspT107I GGYRCC 1 cut(s) 1502
BspTNI GGTCTC 2 cut(s) 1487, 1633
BsrDI GCAATG 4 cut(s) 104, 1150, 1596, 1840
BsrI ACTGG 3 cut(s) 807, 1201, 1261
BssECI CCNNGG 3 cut(s) 1083, 1381, 1785
BssMI GATC 9 cut(s) 478, 671, 760, 1165, 1259, 1457, 1611, 1714, 2128
BssNAI GTATAC 1 cut(s) 1052
BssT1I CCWWGG 2 cut(s) 1381, 1785
Bst1107I GTATAC 1 cut(s) 1052
Bst2UI CCWGG 3 cut(s) 1507, 1563, 1644
Bst4CI ACNGT 6 cut(s) 83, 609, 790, 902, 1544, 1935
Bst6I CTCTTC 1 cut(s) 1036
BstC8I GCNNGC 5 cut(s) 368, 372, 439, 1587, 1662
BstDSI CCRYGG 1 cut(s) 1083
BstF5I GGATG 3 cut(s) 60, 839, 1859
BstKTI GATC 9 cut(s) 481, 674, 763, 1168, 1262, 1460, 1614, 1717, 2131
BstMAI GTCTC 7 cut(s) 551, 908, 1033, 1487, 1633, 1975, 2341
BstMBI GATC 9 cut(s) 478, 671, 760, 1165, 1259, 1457, 1611, 1714, 2128
BstNI CCWGG 3 cut(s) 1507, 1563, 1644
BstNSI RCATGY 2 cut(s) 2190, 2324
BstSCI CCNGG 3 cut(s) 1505, 1561, 1642
BstSFI CTRYAG 2 cut(s) 605, 968
BstV1I GCAGC 2 cut(s) 222, 954
BstV2I GAAGAC 2 cut(s) 16, 1430
BstX2I RGATCY 4 cut(s) 671, 760, 1259, 1714
BstYI RGATCY 4 cut(s) 671, 760, 1259, 1714
BstZ17I GTATAC 1 cut(s) 1052
BsuI GTATCC 1 cut(s) 2074
BsuRI GGCC 7 cut(s) 323, 914, 1088, 1510, 1797, 1920, 2065
BtgI CCRYGG 1 cut(s) 1083
BtsCI GGATG 3 cut(s) 60, 839, 1859
BtsIMutI CAGTG 4 cut(s) 800, 1208, 1777, 2173
Cac8I GCNNGC 5 cut(s) 368, 372, 439, 1587, 1662
CaiI CAGNNNCTG 1 cut(s) 81
Cfr13I GGNCC 2 cut(s) 1475, 2063
CsiI ACCWGGT 1 cut(s) 1561
Csp6I GTAC 5 cut(s) 177, 699, 1036, 1157, 1566
CspCI CAANNNNNGTGG 2 cut(s) 1753, 1788
CviAII CATG 9 cut(s) 20, 165, 261, 466, 566, 1581, 1873, 2187, 2321
CviQI GTAC 5 cut(s) 177, 699, 1036, 1157, 1566
DpnI GATC 9 cut(s) 480, 673, 762, 1167, 1261, 1459, 1613, 1716, 2130
DpnII GATC 9 cut(s) 478, 671, 760, 1165, 1259, 1457, 1611, 1714, 2128
DraI TTTAAA 1 cut(s) 2263
EaeI YGGCCR 3 cut(s) 321, 912, 1508
Eam1104I CTCTTC 1 cut(s) 1036
EarI CTCTTC 1 cut(s) 1036
Eco130I CCWWGG 2 cut(s) 1381, 1785
Eco31I GGTCTC 2 cut(s) 1487, 1633
Eco47I GGWCC 1 cut(s) 1475
Eco57I CTGAAG 1 cut(s) 290
EcoO109I RGGNCCY 1 cut(s) 2063
EcoRI GAATTC 3 cut(s) 169, 680, 2134
EcoRII CCWGG 3 cut(s) 1505, 1561, 1642
EcoT14I CCWWGG 2 cut(s) 1381, 1785
ErhI CCWWGG 2 cut(s) 1381, 1785
Esp3I CGTCTC 1 cut(s) 2341
FaeI CATG 9 cut(s) 23, 168, 264, 469, 569, 1584, 1876, 2190, 2324
FaqI GGGAC 2 cut(s) 893, 1723
FatI CATG 9 cut(s) 19, 164, 260, 465, 565, 1580, 1872, 2186, 2320
FauI CCCGC 1 cut(s) 73
FblI GTMKAC 1 cut(s) 1051
Fnu4HI GCNGC 2 cut(s) 211, 968
FokI GGATG 3 cut(s) 47, 826, 1846
Fsp4HI GCNGC 2 cut(s) 211, 968
FspBI CTAG 9 cut(s) 216, 495, 686, 753, 855, 1047, 1349, 1706, 1734
GluI GCNGC 2 cut(s) 211, 968
GsaI CCCAGC 1 cut(s) 97
GsuI CTGGAG 1 cut(s) 2160
HaeIII GGCC 7 cut(s) 323, 914, 1088, 1510, 1797, 1920, 2065
HapII CCGG 3 cut(s) 653, 722, 1511
Hin1II CATG 9 cut(s) 23, 168, 264, 469, 569, 1584, 1876, 2190, 2324
HincII GTYRAC 1 cut(s) 616
HindII GTYRAC 1 cut(s) 616
HindIII AAGCTT 4 cut(s) 155, 368, 529, 893
HpaII CCGG 3 cut(s) 653, 722, 1511
HphI GGTGA 3 cut(s) 31, 1079, 1565
Hpy166II GTNNAC 4 cut(s) 73, 616, 1052, 2326
Hpy8I GTNNAC 4 cut(s) 73, 616, 1052, 2326
Hpy99I CGWCG 2 cut(s) 2110, 2210
HpyAV CCTTC 4 cut(s) 609, 1277, 2047, 2310
HpyCH4III ACNGT 6 cut(s) 83, 609, 790, 902, 1544, 1935
HpyCH4IV ACGT 2 cut(s) 2108, 2350
HpySE526I ACGT 2 cut(s) 2108, 2350
Hsp92II CATG 9 cut(s) 23, 168, 264, 469, 569, 1584, 1876, 2190, 2324
Kzo9I GATC 9 cut(s) 478, 671, 760, 1165, 1259, 1457, 1611, 1714, 2128
LmnI GCTCC 2 cut(s) 401, 1513
Lsp1109I GCAGC 2 cut(s) 222, 954
LweI GCATC 2 cut(s) 1393, 1669
MabI ACCWGGT 1 cut(s) 1561
MaeI CTAG 9 cut(s) 216, 495, 686, 753, 855, 1047, 1349, 1706, 1734
MaeII ACGT 2 cut(s) 2108, 2350
MaeIII GTNAC 9 cut(s) 49, 202, 557, 798, 1109, 1684, 1868, 2045, 2211
MalI GATC 9 cut(s) 480, 673, 762, 1167, 1261, 1459, 1613, 1716, 2130
MboI GATC 9 cut(s) 478, 671, 760, 1165, 1259, 1457, 1611, 1714, 2128
MboII GAAGA 6 cut(s) 16, 132, 296, 1023, 1071, 1435
MfeI CAATTG 5 cut(s) 360, 818, 1007, 1056, 1354
MflI RGATCY 4 cut(s) 671, 760, 1259, 1714
MlsI TGGCCA 1 cut(s) 914
MluNI TGGCCA 1 cut(s) 914
MlyI GAGTC 5 cut(s) 553, 719, 723, 1204, 1895
MmeI TCCRAC 5 cut(s) 316, 867, 1485, 2024, 2129
Mox20I TGGCCA 1 cut(s) 914
MroXI GAANNNNTTC 1 cut(s) 332
MscI TGGCCA 1 cut(s) 914
MseI TTAA 8 cut(s) 395, 470, 741, 864, 977, 1599, 2111, 2262
MslI CAYNNNNRTG 1 cut(s) 1965
Msp20I TGGCCA 1 cut(s) 914
MspA1I CMGCKG 2 cut(s) 246, 2290
MspI CCGG 3 cut(s) 653, 722, 1511
MspR9I CCNGG 3 cut(s) 1507, 1563, 1644
MunI CAATTG 5 cut(s) 360, 818, 1007, 1056, 1354
MvaI CCWGG 3 cut(s) 1507, 1563, 1644
NdeII GATC 9 cut(s) 478, 671, 760, 1165, 1259, 1457, 1611, 1714, 2128
NlaIII CATG 9 cut(s) 23, 168, 264, 469, 569, 1584, 1876, 2190, 2324
NlaIV GGNNCC 4 cut(s) 646, 1477, 1504, 2064
NmeAIII GCCGAG 1 cut(s) 349
NmuCI GTSAC 2 cut(s) 798, 2211
NspI RCATGY 2 cut(s) 2190, 2324
PciI ACATGT 1 cut(s) 2186
PdmI GAANNNNTTC 1 cut(s) 332
PfeI GAWTC 5 cut(s) 137, 146, 1191, 1386, 1996
PflMI CCANNNNNTGG 1 cut(s) 668
PkrI GCNGC 2 cut(s) 212, 969
PleI GAGTC 5 cut(s) 552, 719, 722, 1204, 1894
PpsI GAGTC 5 cut(s) 552, 719, 722, 1204, 1894
PscI ACATGT 1 cut(s) 2186
PshBI ATTAAT 1 cut(s) 864
Psp6I CCWGG 3 cut(s) 1505, 1561, 1642
PspFI CCCAGC 1 cut(s) 93
PspGI CCWGG 3 cut(s) 1505, 1561, 1642
PspN4I GGNNCC 4 cut(s) 646, 1477, 1504, 2064
PspPI GGNCC 2 cut(s) 1475, 2063
PstI CTGCAG 1 cut(s) 972
PstNI CAGNNNCTG 1 cut(s) 81
PsuI RGATCY 4 cut(s) 671, 760, 1259, 1714
PvuII CAGCTG 1 cut(s) 2290
RsaI GTAC 5 cut(s) 178, 700, 1037, 1158, 1567
RsaNI GTAC 5 cut(s) 177, 699, 1036, 1157, 1566
RseI CAYNNNNRTG 1 cut(s) 1965
SaqAI TTAA 8 cut(s) 395, 470, 741, 864, 977, 1599, 2111, 2262
SatI GCNGC 2 cut(s) 211, 968
Sau3AI GATC 9 cut(s) 478, 671, 760, 1165, 1259, 1457, 1611, 1714, 2128
Sau96I GGNCC 2 cut(s) 1475, 2063
SchI GAGTC 5 cut(s) 553, 719, 723, 1204, 1895
ScrFI CCNGG 3 cut(s) 1507, 1563, 1644
SexAI ACCWGGT 1 cut(s) 1561
SfaNI GCATC 2 cut(s) 1393, 1669
SfcI CTRYAG 2 cut(s) 605, 968
SinI GGWCC 1 cut(s) 1475
SmiMI CAYNNNNRTG 1 cut(s) 1965
SmlI CTYRAG 2 cut(s) 541, 2122
SmoI CTYRAG 2 cut(s) 541, 2122
SpeI ACTAGT 1 cut(s) 215
SsiI CCGC 4 cut(s) 66, 246, 696, 1647
SspI AATATT 1 cut(s) 474
SspMI CTAG 9 cut(s) 216, 495, 686, 753, 855, 1047, 1349, 1706, 1734
StyD4I CCNGG 3 cut(s) 1505, 1561, 1642
StyI CCWWGG 2 cut(s) 1381, 1785
TaaI ACNGT 6 cut(s) 83, 609, 790, 902, 1544, 1935
TaiI ACGT 2 cut(s) 2111, 2353
TaqI TCGA 4 cut(s) 173, 678, 1745, 2040
TatI WGTACW 1 cut(s) 1156
TfiI GAWTC 5 cut(s) 137, 146, 1191, 1386, 1996
Tru1I TTAA 8 cut(s) 395, 470, 741, 864, 977, 1599, 2111, 2262
Tru9I TTAA 8 cut(s) 395, 470, 741, 864, 977, 1599, 2111, 2262
TscAI CASTG 4 cut(s) 807, 1208, 1777, 2173
TseFI GTSAC 2 cut(s) 798, 2211
TseI GCWGC 2 cut(s) 210, 967
Tsp45I GTSAC 2 cut(s) 798, 2211
TspDTI ATGAA 4 cut(s) 443, 1063, 1641, 2130
TspGWI ACGGA 1 cut(s) 1727
TspRI CASTG 4 cut(s) 807, 1208, 1777, 2173
Van91I CCANNNNNTGG 1 cut(s) 668
VpaK11BI GGWCC 1 cut(s) 1475
VspI ATTAAT 1 cut(s) 864
XbaI TCTAGA 1 cut(s) 752
XceI RCATGY 2 cut(s) 2190, 2324
XcmI CCANNNNNNNNNTGG 1 cut(s) 472
XmiI GTMKAC 1 cut(s) 1051
XmnI GAANNNNTTC 1 cut(s) 332
XspI CTAG 9 cut(s) 216, 495, 686, 753, 855, 1047, 1349, 1706, 1734
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.