Rmu_sc0001933.1_g000003

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001933.1
OG0000047
Physical Location & Seq
Reverse (-)
17021 .. 19957
2937 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001933.1_g000003.1.cds

Sequence Viewer

Length: 2937 bp
atgaaaactttgctacatttgttccttctcttgatcacattctgggtcagtatcatcatcccagcagttcacagccagtgtattaaagaccagcaactatcactgctccaattcaagaaaagcctcaatcattccacgaagcttatttcttggaatgcaagtactgattgttgttcttgggcgggcatcacttgcagccgtaatgggcgtgttctgggtcttgacataagcagcaaacatatcttagctggaattgctggaattggaattgacaattccagcagtctcttccatcttcattatcttcaaagcctcaatctggcggacaactttcttggtgattttcaatcaattccatccgcgattggaaagctggtgaacttgaggtatctgaatttatctcttaattattatggagggcaaattcccattgaaattacacgcttgacgaggttggtagttcttgatttttcttacaattatgccaagttagaagttggaagtccaaatttacacacgttggttcaaaacttcacagagcttagagagttatatcttgatggtgtcctaatatcagaacaggggagtcagtggtgccaagccatatcatcttcccttcccaacctcaacgccttgagcatgaacaattgtaatctttcaggccctcttctcgagtcccttgctaagcttcagtctctatctgtgattaggttagactggaacaacttctctgggccacttccaggattctttgccaacttttcaaacttgactgtcttgagtctccatacatgcgagttgcatggaacatttcctaaagagatctttcagttaccttctctacaaagtattgaactttcagaaaatgaccaacttgatggttccttgccagagttcccgaggaatggatctcttcagttcctatatataatcagaacaaaattttcagggttattgccaacttctattggcaatctcaaaatgttgtccaccataattatgccaggttgctatttcaccggaccgatgcccaagtcaatgacaaaccttacacaattggtttatttgtttatggctgacaacaaattggaaggttcaattccgtcattcagtggggccaagaatgttcacaccatagacctttccaacaatcgtctaacaggtactattaattccacccactggagaaaccttactaagctatcctctctcgatttgagttccaataagctcgatgggaatatcccatcatctctgttttctcttcccctattgaatactctagatctttccagcaatcaattctctggtccattccctgaaatttctaatgtgtcttcctacttgctgaatggccttgatcttgaacttgatttgagaaatcaatctgacttgagcattttggacctttcagacaaccagataaatggcaagttacccgattggatttggagtttaagtaatctcattatcctagatctttcttgcaactccctagattctctagaacttcgttcatttaaactcactaatcttactcacctttaccttcattccaaccagtttcatgggcaattcccaatgtttccatcaccttgcagtgcctcttatctagatttctccaggaattatttcaactctatcataccgactaccattggagatatgtttcccagcacaaaatttctctctctttcgagcaataacctcaatgggatcattccagaatcattgtgcaattcagaatctcttgaggttcttgatctatccaataattctttgagtggcaaggttccccaatgcttaactgcaatgacgaagcttgaagtactcaacataaggagaaacaatcttacaaatgttgatgacttctctcataattgtgggttaaaaactcttgacatcagtgaaaatcaccttcaaggccggtttctaaaatctctagtcagctgcacccagttagaggttttgaaccttggaaacaatttgataacagagccatttccatgctttttgaggaacacatccaccttgcgtgtccttgtcttgctatccaataaattttatgggcgcattggatgtcgcaagactaatggcatttggccagtacttcaaatcatagacttagctcacaacaattttagtggtgaagtacctggaacagctttgacatcttggcaggcgatgaggactagcaaagatgatgccctagggaagatcagtaaccttcgatatgcgtcgtcggttggagattattatcaagtagatacaatcttggttaccaacaaaggtatagaaatggagctggtgaatgttttaactatcttcacctccattgacttctcgtgcaacaagttcaacggatcaatacccgaggaaattggagaactccaatcattgcatgccctcaacttgtccaacaatgctttcacaggtgcagttccatcatcactcagtaacctgagtcagctagagtccttggacctctcgaaaaacaaactgagcggtcaaatcccaccggagcttacaaaactcactttccttgaattcttgaatctctcatataatcagttggtcgggaggataccaagcggtgctcaattttcaacatttgatgcagcttccttccaaggtaacaaaggattatgggggcctcctttaacagcagataacaacccagggttctcaccaccaaagctggaaggaaaccattcaaatcctggacatgagattgattgggatattatcagtcctgaaattgggtttacatgtgggtttgggattgccatcgggtcacttttgttttccaagagatggaggaaatggtattacagagctatgtatgacatgcttctaaagatattccctcagctagaacgaagacttggtcatcacaggaggcatgtttatgtacatcaaggatactggagacgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

978

Amino Acids

108.92

Weight (kDa)

6.48

Isoelectric Point (pI)

38.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 594
AccB7I CCANNNNNTGG 2 cut(s) 1182, 2814
AccBSI CCGCTC 1 cut(s) 2505
AccII CGCG 1 cut(s) 362
AciI CCGC 5 cut(s) 182, 323, 360, 2505, 2592
AclWI GGATC 3 cut(s) 916, 1724, 2371
AcoI YGGCCR 1 cut(s) 2102
AcsI RAATTY 8 cut(s) 394, 423, 508, 941, 1323, 1682, 2060, 2546
AcuI CTGAAG 2 cut(s) 674, 899
AfaI GTAC 6 cut(s) 163, 1165, 1830, 2109, 2154, 2913
AfiI CCNNNNNNNGG 7 cut(s) 319, 743, 905, 1182, 1963, 2759, 2814
AflIII ACRYGT 2 cut(s) 516, 2768
AjnI CCWGG 6 cut(s) 742, 1003, 1622, 2155, 2677, 2719
AjuI GAANNNNNNNTTGG 4 cut(s) 2411, 2443, 2868, 2900
Alw21I GWGCWC 1 cut(s) 2599
Alw26I GTCTC 4 cut(s) 290, 699, 788, 2923
AlwI GGATC 3 cut(s) 916, 1724, 2371
Ama87I CYCGRG 3 cut(s) 671, 898, 2372
AoxI GGCC 7 cut(s) 661, 734, 1116, 1354, 1924, 2102, 2651
ApeKI GCWGC 4 cut(s) 195, 231, 1950, 2618
ApoI RAATTY 8 cut(s) 394, 423, 508, 941, 1323, 1682, 2060, 2546
ArsI GACNNNNNNTTYG 2 cut(s) 2872, 2904
AseI ATTAAT 1 cut(s) 1170
Asp700I GAANNNNTTC 3 cut(s) 725, 1631, 2710
AspA2I CCTAGG 1 cut(s) 2209
AspLEI GCGC 1 cut(s) 2073
AspS9I GGNCC 8 cut(s) 662, 734, 1022, 1116, 1310, 1405, 2482, 2651
AvaI CYCGRG 3 cut(s) 671, 898, 2372
AvaII GGWCC 4 cut(s) 1022, 1310, 1405, 2482
AvrII CCTAGG 1 cut(s) 2209
BalI TGGCCA 1 cut(s) 2104
BanI GGYRCC 1 cut(s) 594
BauI CACGAG 1 cut(s) 2344
BbsI GAAGAC 2 cut(s) 1329, 2887
Bbv12I GWGCWC 1 cut(s) 2599
BbvCI CCTCAGC 1 cut(s) 2868
BbvI GCAGC 4 cut(s) 207, 243, 1937, 2630
BceAI ACGGC 1 cut(s) 183
BcgI CGANNNNNNTGC 2 cut(s) 662, 696
BciT130I CCWGG 6 cut(s) 744, 1005, 1624, 2157, 2679, 2721
BciVI GTATCC 2 cut(s) 2577, 2915
BclI TGATCA 1 cut(s) 33
BcoDI GTCTC 4 cut(s) 290, 699, 788, 2923
BfuI GTATCC 2 cut(s) 2577, 2915
BglII AGATCT 3 cut(s) 822, 1285, 1477
BisI GCNGC 4 cut(s) 196, 232, 1951, 2619
BlnI CCTAGG 1 cut(s) 2209
BlpI GCTNAGC 1 cut(s) 684
BlsI GCNGC 4 cut(s) 197, 233, 1952, 2620
BmcAI AGTACT 3 cut(s) 163, 1830, 2109
Bme1390I CCNGG 6 cut(s) 744, 1005, 1624, 2157, 2679, 2721
Bme18I GGWCC 4 cut(s) 1022, 1310, 1405, 2482
BmeT110I CYCGRG 3 cut(s) 671, 898, 2372
BmgT120I GGNCC 8 cut(s) 662, 734, 1022, 1116, 1310, 1405, 2482, 2651
BmiI GGNNCC 5 cut(s) 596, 883, 1117, 1794, 2652
BmrFI CCNGG 6 cut(s) 744, 1005, 1624, 2157, 2679, 2721
BmrI ACTGGG 1 cut(s) 1951
BmsI GCATC 4 cut(s) 195, 1017, 2194, 2605
BmuI ACTGGG 1 cut(s) 1951
BpiI GAAGAC 2 cut(s) 1329, 2887
BpmI CTGGAG 2 cut(s) 1204, 1606
Bpu10I CCTNAGC 1 cut(s) 2868
Bpu1102I GCTNAGC 1 cut(s) 684
BpuEI CTTGAG 5 cut(s) 403, 655, 799, 1414, 1772
BsaBI GATNNNNATC 2 cut(s) 2256, 2786
BsaJI CCNNGG 8 cut(s) 899, 1975, 2209, 2373, 2478, 2629, 2677, 2678
BsaWI WCCGGW 2 cut(s) 1019, 2518
BsaXI ACNNNNNCTCC 2 cut(s) 1444, 1474
Bsc4I CCNNNNNNNGG 7 cut(s) 319, 743, 905, 1182, 1963, 2759, 2814
Bse118I RCCGGY 1 cut(s) 1926
Bse1I ACTGG 7 cut(s) 76, 722, 1187, 1561, 1957, 2105, 2930
Bse3DI GCAATG 2 cut(s) 1818, 2396
Bse8I GATNNNNATC 2 cut(s) 2256, 2786
BseBI CCWGG 6 cut(s) 744, 1005, 1624, 2157, 2679, 2721
BseDI CCNNGG 8 cut(s) 899, 1975, 2209, 2373, 2478, 2629, 2677, 2678
BseGI GGATG 4 cut(s) 57, 356, 2024, 2084
BseJI GATNNNNATC 2 cut(s) 2256, 2786
BseLI CCNNNNNNNGG 7 cut(s) 319, 743, 905, 1182, 1963, 2759, 2814
BseMI GCAATG 2 cut(s) 1818, 2396
BseMII CTCAG 4 cut(s) 2453, 2467, 2492, 2882
BseNI ACTGG 7 cut(s) 76, 722, 1187, 1561, 1957, 2105, 2930
BseXI GCAGC 4 cut(s) 207, 243, 1937, 2630
BseYI CCCAGC 2 cut(s) 61, 1673
BsgI GTGCAG 2 cut(s) 1936, 2457
Bsh1236I CGCG 1 cut(s) 362
BshFI GGCC 7 cut(s) 663, 736, 1118, 1356, 1926, 2104, 2653
BshNI GGYRCC 1 cut(s) 594
BsiHKAI GWGCWC 1 cut(s) 2599
BsiHKCI CYCGRG 3 cut(s) 671, 898, 2372
BsiSI CCGG 3 cut(s) 1020, 1927, 2519
BslFI GGGAC 1 cut(s) 661
BslI CCNNNNNNNGG 7 cut(s) 319, 743, 905, 1182, 1963, 2759, 2814
BsmAI GTCTC 4 cut(s) 290, 699, 788, 2923
BsmBI CGTCTC 1 cut(s) 2923
BsmFI GGGAC 1 cut(s) 661
BsmI GAATGC 1 cut(s) 160
BsnI GGCC 7 cut(s) 663, 736, 1118, 1356, 1926, 2104, 2653
BsoBI CYCGRG 3 cut(s) 671, 898, 2372
Bsp1286I GDGCHC 1 cut(s) 2599
Bsp1407I TGTACA 1 cut(s) 2911
Bsp1720I GCTNAGC 1 cut(s) 684
BspACI CCGC 5 cut(s) 182, 323, 360, 2505, 2592
BspANI GGCC 7 cut(s) 663, 736, 1118, 1356, 1926, 2104, 2653
BspCNI CTCAG 4 cut(s) 2454, 2466, 2493, 2881
BspFNI CGCG 1 cut(s) 362
BspLI GGNNCC 5 cut(s) 596, 883, 1117, 1794, 2652
BspPI GGATC 3 cut(s) 916, 1724, 2371
BspT107I GGYRCC 1 cut(s) 594
BsrBI CCGCTC 1 cut(s) 2505
BsrDI GCAATG 2 cut(s) 1818, 2396
BsrFI RCCGGY 1 cut(s) 1926
BsrGI TGTACA 1 cut(s) 2911
BsrI ACTGG 7 cut(s) 76, 722, 1187, 1561, 1957, 2105, 2930
BssAI RCCGGY 1 cut(s) 1926
BssECI CCNNGG 8 cut(s) 899, 1975, 2209, 2373, 2478, 2629, 2677, 2678
BssSI CACGAG 1 cut(s) 2344
BssT1I CCWWGG 4 cut(s) 1975, 2209, 2478, 2629
Bst2BI CACGAG 1 cut(s) 2344
Bst2UI CCWGG 6 cut(s) 744, 1005, 1624, 2157, 2679, 2721
Bst4CI ACNGT 1 cut(s) 775
Bst6I CTCTTC 4 cut(s) 293, 672, 918, 1269
BstAPI GCANNNNNTGC 1 cut(s) 192
BstAUI TGTACA 1 cut(s) 2911
BstC8I GCNNGC 3 cut(s) 184, 2181, 2403
BstDEI CTNAG 9 cut(s) 244, 542, 684, 1197, 2125, 2453, 2462, 2501, 2868
BstEII GGTNACC 1 cut(s) 2278
BstF5I GGATG 4 cut(s) 57, 356, 2024, 2084
BstFNI CGCG 1 cut(s) 362
BstHHI GCGC 1 cut(s) 2073
BstMAI GTCTC 4 cut(s) 290, 699, 788, 2923
BstMWI GCNNNNNNNGC 2 cut(s) 192, 254
BstNI CCWGG 6 cut(s) 744, 1005, 1624, 2157, 2679, 2721
BstNSI RCATGY 5 cut(s) 795, 2405, 2772, 2851, 2906
BstPI GGTNACC 1 cut(s) 2278
BstSCI CCNGG 6 cut(s) 742, 1003, 1622, 2155, 2677, 2719
BstUI CGCG 1 cut(s) 362
BstV1I GCAGC 4 cut(s) 207, 243, 1937, 2630
BstV2I GAAGAC 2 cut(s) 1329, 2887
BstX2I RGATCY 4 cut(s) 822, 908, 1285, 1477
BstXI CCANNNNNNTGG 3 cut(s) 878, 1427, 1568
BstYI RGATCY 4 cut(s) 822, 908, 1285, 1477
BsuI GTATCC 2 cut(s) 2577, 2915
BsuRI GGCC 7 cut(s) 663, 736, 1118, 1356, 1926, 2104, 2653
BtgZI GCGATG 1 cut(s) 2198
BtsCI GGATG 4 cut(s) 57, 356, 2024, 2084
BtsI GCAGTG 2 cut(s) 101, 1606
BtsIMutI CAGTG 7 cut(s) 83, 101, 596, 1117, 1180, 1606, 1912
Cac8I GCNNGC 3 cut(s) 184, 2181, 2403
CfoI GCGC 1 cut(s) 2073
Cfr10I RCCGGY 1 cut(s) 1926
Cfr13I GGNCC 8 cut(s) 662, 734, 1022, 1116, 1310, 1405, 2482, 2651
CpoI CGGWCCG 1 cut(s) 1022
CseI GACGC 1 cut(s) 2226
Csp6I GTAC 6 cut(s) 162, 1164, 1829, 2108, 2153, 2912
CspCI CAANNNNNGTGG 2 cut(s) 2125, 2160
CspI CGGWCCG 1 cut(s) 1022
CviQI GTAC 6 cut(s) 162, 1164, 1829, 2108, 2153, 2912
DdeI CTNAG 9 cut(s) 244, 542, 684, 1197, 2125, 2453, 2462, 2501, 2868
DraI TTTAAA 1 cut(s) 1522
EaeI YGGCCR 1 cut(s) 2102
Eam1104I CTCTTC 4 cut(s) 293, 672, 918, 1269
EarI CTCTTC 4 cut(s) 293, 672, 918, 1269
EciI GGCGGA 1 cut(s) 338
Eco130I CCWWGG 4 cut(s) 1975, 2209, 2478, 2629
Eco47I GGWCC 4 cut(s) 1022, 1310, 1405, 2482
Eco57I CTGAAG 2 cut(s) 674, 899
Eco88I CYCGRG 3 cut(s) 671, 898, 2372
Eco91I GGTNACC 1 cut(s) 2278
EcoO109I RGGNCCY 2 cut(s) 662, 2651
EcoO65I GGTNACC 1 cut(s) 2278
EcoRI GAATTC 1 cut(s) 2546
EcoRII CCWGG 6 cut(s) 742, 1003, 1622, 2155, 2677, 2719
EcoT14I CCWWGG 4 cut(s) 1975, 2209, 2478, 2629
ErhI CCWWGG 4 cut(s) 1975, 2209, 2478, 2629
Esp3I CGTCTC 1 cut(s) 2923
FaqI GGGAC 1 cut(s) 661
FauI CCCGC 1 cut(s) 175
FbaI TGATCA 1 cut(s) 33
Fnu4HI GCNGC 4 cut(s) 196, 232, 1951, 2619
FokI GGATG 4 cut(s) 44, 343, 2011, 2091
Fsp4HI GCNGC 4 cut(s) 196, 232, 1951, 2619
GlaI GCGC 1 cut(s) 2072
GluI GCNGC 4 cut(s) 196, 232, 1951, 2619
GsaI CCCAGC 2 cut(s) 65, 1677
GsuI CTGGAG 2 cut(s) 1204, 1606
HaeIII GGCC 7 cut(s) 663, 736, 1118, 1356, 1926, 2104, 2653
HapII CCGG 3 cut(s) 1020, 1927, 2519
HgaI GACGC 1 cut(s) 2226
HhaI GCGC 1 cut(s) 2073
Hin6I GCGC 1 cut(s) 2071
HinP1I GCGC 1 cut(s) 2071
HindIII AAGCTT 3 cut(s) 140, 686, 1820
HpaII CCGG 3 cut(s) 1020, 1927, 2519
Hpy166II GTNNAC 5 cut(s) 70, 379, 990, 1129, 2766
Hpy188I TCNGA 7 cut(s) 393, 577, 862, 935, 1390, 1414, 1744
Hpy8I GTNNAC 5 cut(s) 70, 379, 990, 1129, 2766
Hpy99I CGWCG 2 cut(s) 2242, 2245
HpyAV CCTTC 9 cut(s) 35, 626, 846, 1085, 1559, 1928, 2237, 2635, 2696
HpyCH4III ACNGT 1 cut(s) 775
HpyCH4IV ACGT 2 cut(s) 518, 2932
HpyF10VI GCNNNNNNNGC 2 cut(s) 192, 254
HpyF3I CTNAG 9 cut(s) 244, 542, 684, 1197, 2125, 2453, 2462, 2501, 2868
HpySE526I ACGT 2 cut(s) 518, 2932
HspAI GCGC 1 cut(s) 2071
Ksp22I TGATCA 1 cut(s) 33
LmnI GCTCC 3 cut(s) 111, 2302, 2521
Lsp1109I GCAGC 4 cut(s) 207, 243, 1937, 2630
LweI GCATC 4 cut(s) 195, 1017, 2194, 2605
MaeII ACGT 2 cut(s) 518, 2932
MaeIII GTNAC 7 cut(s) 831, 1434, 2222, 2278, 2456, 2633, 2793
MbiI CCGCTC 1 cut(s) 2505
MfeI CAATTG 2 cut(s) 646, 1055
MflI RGATCY 4 cut(s) 822, 908, 1285, 1477
MhlI GDGCHC 1 cut(s) 2599
MlsI TGGCCA 1 cut(s) 2104
MluNI TGGCCA 1 cut(s) 2104
MlyI GAGTC 5 cut(s) 595, 683, 790, 2473, 2483
MmeI TCCRAC 5 cut(s) 478, 1170, 1581, 2227, 2442
Mox20I TGGCCA 1 cut(s) 2104
MroXI GAANNNNTTC 3 cut(s) 725, 1631, 2710
MscI TGGCCA 1 cut(s) 2104
MseI TTAA 9 cut(s) 84, 405, 1170, 1457, 1521, 1805, 1889, 2318, 2660
MslI CAYNNNNRTG 4 cut(s) 998, 1881, 2005, 2907
Msp20I TGGCCA 1 cut(s) 2104
MspA1I CMGCKG 1 cut(s) 1950
MspI CCGG 3 cut(s) 1020, 1927, 2519
MspR9I CCNGG 6 cut(s) 744, 1005, 1624, 2157, 2679, 2721
MunI CAATTG 2 cut(s) 646, 1055
Mva1269I GAATGC 1 cut(s) 160
MvaI CCWGG 6 cut(s) 744, 1005, 1624, 2157, 2679, 2721
MvnI CGCG 1 cut(s) 362
MwoI GCNNNNNNNGC 2 cut(s) 192, 254
NlaIV GGNNCC 5 cut(s) 596, 883, 1117, 1794, 2652
NmuCI GTSAC 1 cut(s) 2793
NspI RCATGY 5 cut(s) 795, 2405, 2772, 2851, 2906
PaeI GCATGC 1 cut(s) 2405
PaeR7I CTCGAG 1 cut(s) 671
PasI CCCWGGG 1 cut(s) 2678
PciI ACATGT 1 cut(s) 2768
PctI GAATGC 1 cut(s) 160
PdmI GAANNNNTTC 3 cut(s) 725, 1631, 2710
PfeI GAWTC 5 cut(s) 747, 1499, 1727, 1745, 2554
PflFI GACNNNGTC 1 cut(s) 2886
PflMI CCANNNNNTGG 2 cut(s) 1182, 2814
PfoI TCCNGGA 3 cut(s) 742, 1622, 2719
PkrI GCNGC 4 cut(s) 197, 233, 1952, 2620
PleI GAGTC 5 cut(s) 594, 682, 789, 2472, 2482
PpsI GAGTC 5 cut(s) 594, 682, 789, 2472, 2482
PscI ACATGT 1 cut(s) 2768
PshBI ATTAAT 1 cut(s) 1170
Psp6I CCWGG 6 cut(s) 742, 1003, 1622, 2155, 2677, 2719
PspEI GGTNACC 1 cut(s) 2278
PspFI CCCAGC 2 cut(s) 61, 1673
PspGI CCWGG 6 cut(s) 742, 1003, 1622, 2155, 2677, 2719
PspN4I GGNNCC 5 cut(s) 596, 883, 1117, 1794, 2652
PspPI GGNCC 8 cut(s) 662, 734, 1022, 1116, 1310, 1405, 2482, 2651
PsuI RGATCY 4 cut(s) 822, 908, 1285, 1477
PsyI GACNNNGTC 1 cut(s) 2886
PvuII CAGCTG 1 cut(s) 1950
RsaI GTAC 6 cut(s) 163, 1165, 1830, 2109, 2154, 2913
RsaNI GTAC 6 cut(s) 162, 1164, 1829, 2108, 2153, 2912
RseI CAYNNNNRTG 4 cut(s) 998, 1881, 2005, 2907
Rsr2I CGGWCCG 1 cut(s) 1022
RsrII CGGWCCG 1 cut(s) 1022
SaqAI TTAA 9 cut(s) 84, 405, 1170, 1457, 1521, 1805, 1889, 2318, 2660
SatI GCNGC 4 cut(s) 196, 232, 1951, 2619
Sau96I GGNCC 8 cut(s) 662, 734, 1022, 1116, 1310, 1405, 2482, 2651
ScaI AGTACT 3 cut(s) 163, 1830, 2109
SchI GAGTC 5 cut(s) 595, 683, 790, 2473, 2483
ScrFI CCNGG 6 cut(s) 744, 1005, 1624, 2157, 2679, 2721
SduI GDGCHC 1 cut(s) 2599
SfaNI GCATC 4 cut(s) 195, 1017, 2194, 2605
Sfr274I CTCGAG 1 cut(s) 671
SinI GGWCC 4 cut(s) 1022, 1310, 1405, 2482
SlaI CTCGAG 1 cut(s) 671
SmiMI CAYNNNNRTG 4 cut(s) 998, 1881, 2005, 2907
SmlI CTYRAG 6 cut(s) 382, 634, 671, 778, 1393, 1751
SmoI CTYRAG 6 cut(s) 382, 634, 671, 778, 1393, 1751
SphI GCATGC 1 cut(s) 2405
SsiI CCGC 5 cut(s) 182, 323, 360, 2505, 2592
StyD4I CCNGG 6 cut(s) 742, 1003, 1622, 2155, 2677, 2719
StyI CCWWGG 4 cut(s) 1975, 2209, 2478, 2629
TaaI ACNGT 1 cut(s) 775
TaiI ACGT 2 cut(s) 521, 2935
TaqI TCGA 6 cut(s) 672, 1212, 1233, 1697, 2230, 2489
TaqII GACCGA 1 cut(s) 1039
TatI WGTACW 4 cut(s) 161, 1828, 2107, 2911
TfiI GAWTC 5 cut(s) 747, 1499, 1727, 1745, 2554
Tru1I TTAA 9 cut(s) 84, 405, 1170, 1457, 1521, 1805, 1889, 2318, 2660
Tru9I TTAA 9 cut(s) 84, 405, 1170, 1457, 1521, 1805, 1889, 2318, 2660
TscAI CASTG 7 cut(s) 83, 108, 596, 1117, 1187, 1606, 1912
TseFI GTSAC 1 cut(s) 2793
TseI GCWGC 4 cut(s) 195, 231, 1950, 2618
Tsp45I GTSAC 1 cut(s) 2793
TspDTI ATGAA 6 cut(s) 17, 287, 656, 1506, 1541, 1556
TspGWI ACGGA 2 cut(s) 1092, 2376
TspRI CASTG 7 cut(s) 83, 108, 596, 1117, 1187, 1606, 1912
Tth111I GACNNNGTC 1 cut(s) 2886
Van91I CCANNNNNTGG 2 cut(s) 1182, 2814
VpaK11BI GGWCC 4 cut(s) 1022, 1310, 1405, 2482
VspI ATTAAT 1 cut(s) 1170
XapI RAATTY 8 cut(s) 394, 423, 508, 941, 1323, 1682, 2060, 2546
XbaI TCTAGA 3 cut(s) 1282, 1504, 1612
XceI RCATGY 5 cut(s) 795, 2405, 2772, 2851, 2906
XcmI CCANNNNNNNNNTGG 1 cut(s) 2717
XhoI CTCGAG 1 cut(s) 671
XmaJI CCTAGG 1 cut(s) 2209
XmnI GAANNNNTTC 3 cut(s) 725, 1631, 2710
ZrmI AGTACT 3 cut(s) 163, 1830, 2109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.