RchiOBHm_Chr3g0478181

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000047
Physical Location & Seq
Forward (+)
24015403 .. 24017976
2574 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44342

Sequence Viewer

Length: 2574 bp
ATGACAACTTTGTTCCTCCATTTCTTCCTTTTTGTAATTATTACCTGTATTACCAACCTCATCCCTGCAGTTCACAGCAATTGTATTGTAGAACAGCAACTATCACTACTCCATTTCAAGAAAAGTCTTGTATACGTAATTGATCCTCCTTCCCCCAGGCTTATCACATGGAATTCAAGTACTGATTGCTGCTCTTGGCTCGGTGTAACTTGCAGCACTAATGGGTATGTTGTCGGACTTGACCTCAGCAGCGAGTTTGTTTCATGCAGAATTGACAATTCCAGCAGTCTCTTCCAACTTCAACATCTTGAGAGCCTCAATTTGGCCAATAACGTCTTCAATGGCTCTCAAATTCCATCTGCAATCGGAGAGCTTACAAATCTGAGGTATCTAAATGTAGCCCATGGTTTCTATTCCGGGCAAATTCCCATTGAGATTTCACGCTTGGCAAGGTTGGTAAGTCTTGATCTCTCTAGAAATAGCTATGATGGGGTTTCGTTAAAACTTGAAAACCCAAATTTAAGCATGCTAATTCAGAACCTCACAGAGCTTACAGAGTTATATCTTGATTCAGTAGAGATATCAGGACAGGGGAGTGACTGGTGCGAAGCCATATCATCTTCACTGCCAAATCTGAGGGTGTTGAGCTTGTCTTTTTGTGGTCTTTCTGGCCCTATATGTGACTCCCTTGCAAAGCTTCAGTCTCCGTATGAGATTGACTTGGGAAATAACTGGTTCTATGCTCCGGTTCCAAGATCCTTTGCCAATTTTTCAAACTTGACTTCCTTGAGTCTCTCTGGTTGTAACTTGCTGGGAATATTTCCCAAAGAGGTCTTTCTTATTCCTTCCCTACAAACCATTGATATTTCTAGTAATCCGGAACTTGGTGGTTCCTTTCCAGAGTTTCCAAAGAATAGGACAAAACTTTCAACCATATCTCTTTCACATTGCAATTTCACTGGATCCCTCCCCATGTCAATTGAGAACCTTACCCAATTGGTTGACCTGGACGTGTCATGGAACAGGTTCAATAGTCCTATCAGTCCTATTCACTGGGAAGCCCTTGTTAATCTGGAAAGCCTTGACTTCAGCAACAATCTACTCTATGGGAGTATTCCATCGTCTATTGTTTCTCCTCCCTTGCTGGTTGCATTAGCACTTTCTAATAATCATTTCTCTGGTCAAGTCCCTGAATTTTTCAATACCTCTTCACAGTTACTTCGGAACCTTCTTTTGGGAAACAACAATTTGGAAGGAGAAATACCAACATCTATTTTTAATCTTAAAGGGCTTATGTATCTTGATCTTGCTTCAAACAACTTCAGTGGCTTCCCTTTCAGTGGCCCTCAGCAGCCTCGAACTCTTTCATTTCTTGATCTTTCCCACAATAGCTTGTTGTTTGATTATAATGGTACCAGTTCCCCCTTCCTTCAGATTGAGAACTTGCTATTGGCTTCTAACAAGTTGGTAGGACTCCCAGATTTCTTAAAAAATCAATCCACACTTTCGAAATTAGACCTTTCGGGAAACCAGATTCAAGGCCAGATACCTAATTGGATTTGGAGGCTCAATTCTCTTGGACTCCTAAATCTCTCTTATAATTCCATTGTAAATCTAGAACCTCTTCTTCCTAATTCTACATTTACTTTGTTTTCTCTTGACCTTAATTTCAACAAGATTCAGGGTATCCACTCCTCATATGCCTTCCTTCAGATTGGCCGCTTGGGTTTAGCTTCTAACAAGTTGAGAACATTCCCAGACTTCTTGAGAAATCAGTCCACATTAAATTACTTGGACCTTTCAAATAACCAAATTCAAGGCCAGATACCCAATTGGATTTGGAGGCTCAATTCTCTTCAAGAACTGAATCTTCCTTGTAACTACTTGGAAACTCTTGAAGCTCCATTACCTAAGGCTAATTCTTCTACTGTTGTGACGTCACTTGACCTTCATTCAAACCAGCTTCAGGGACAAATCCCATTGTTCCTACCATTTGCCCATTTTCTGGATTACTCAAGAAATAATTTTAGCTCTAGTCTACCGGCTGACATTGGCAGTTTTATCTCTAAAACTAATTTCCTCTCTCTGTCAAGAAATAACTTGCATGGAACCATTCCAAGATCAATTTGCAATACAACTGGTATGGTTCTAGATCTGTCCTATAATTCTTTGAGTGGTATAATTCCGCAATGCTTGACTCAACTTCCGCTTTCAATCCTTGATTTAAGGACAAACAACCTCACTGGCTCTATTCCTGATAATTTTCTTGAGCATTGTAAGCTACAAACTCTTGATCTCAGCAGAAATAATATACAAGGCCAGTTTCCGAAATCTCTTGTCAACTGCTCAAGTTTAGGGGTTTTAAATCTTGGAAACAATCAGATAACAGATACTTTTCCGTGCCTGTTGATGACCATATCCACCTTGCGTGTCCTTGTTTTAAGATCCAACAATCTTTATGGTAGCCTAGGATGTCCCAAGACCAACAGCACGTGGCCTGTGCTGCAAATCATAGATTTAGCACACAACCATTTGAATGGTGAAATACCGGCAACGTCTTTCGCAACATGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

857

Amino Acids

94.81

Weight (kDa)

5.45

Isoelectric Point (pI)

36.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 32 - 72 2.3e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 92 - 290 1.6e-10 Leucine-rich repeat region
LRR_14 PF23598 206 - 437 4.8e-06 Leucine-rich repeat region
LRR_8 PF13855 407 - 465 5.2e-06 Leucine rich repeat
LRR_8 PF13855 479 - 536 1.6e-06 Leucine rich repeat
LRR_8 PF13855 574 - 629 4.5e-07 Leucine rich repeat
LRR_8 PF13855 760 - 819 1.9e-07 Leucine rich repeat
LRR_4 PF12799 760 - 797 5.4e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1407, 1599
AatII GACGTC 1 cut(s) 1940
Acc65I GGTACC 1 cut(s) 1412
AccB1I GGYRCC 1 cut(s) 1412
AccB7I CCANNNNNTGG 1 cut(s) 2005
AccI GTMKAC 2 cut(s) 132, 2038
AccIII TCCGGA 1 cut(s) 877
AciI CCGC 3 cut(s) 1720, 2186, 2207
AclWI GGATC 5 cut(s) 137, 750, 957, 970, 2439
AcoI YGGCCR 2 cut(s) 324, 1717
AcsI RAATTY 6 cut(s) 172, 351, 423, 517, 1193, 1812
AcuI CTGAAG 6 cut(s) 683, 1072, 1306, 1415, 1694, 1949
AcvI CACGTG 1 cut(s) 2493
AcyI GRCGYC 1 cut(s) 1937
AfaI GTAC 2 cut(s) 181, 1414
AfiI CCNNNNNNNGG 6 cut(s) 322, 884, 1234, 1340, 1966, 2005
AflIII ACRYGT 1 cut(s) 1011
AjiI CACGTC 1 cut(s) 1012
AjnI CCWGG 2 cut(s) 155, 1005
AjuI GAANNNNNNNTTGG 6 cut(s) 320, 352, 1217, 1249, 1433, 1465
Alw26I GTCTC 3 cut(s) 293, 708, 797
AlwI GGATC 5 cut(s) 137, 750, 957, 970, 2439
Aor13HI TCCGGA 1 cut(s) 877
AoxI GGCC 8 cut(s) 324, 670, 1342, 1540, 1717, 1819, 2317, 2495
ApeKI GCWGC 5 cut(s) 189, 213, 249, 1351, 2503
ApoI RAATTY 6 cut(s) 172, 351, 423, 517, 1193, 1812
ArsI GACNNNNNNTTYG 2 cut(s) 686, 718
Asp700I GAANNNNTTC 3 cut(s) 1025, 1363, 1623
Asp718I GGTACC 1 cut(s) 1412
AspA2I CCTAGG 1 cut(s) 2467
AspS9I GGNCC 3 cut(s) 671, 1343, 1795
AsuC2I CCSGG 1 cut(s) 418
AsuHPI GGTGA 1 cut(s) 2552
AsuII TTCGAA 1 cut(s) 1508
AvaII GGWCC 1 cut(s) 1795
AvrII CCTAGG 1 cut(s) 2467
AxyI CCTNAGG 1 cut(s) 1911
BalI TGGCCA 1 cut(s) 326
BamHI GGATCC 1 cut(s) 962
BanI GGYRCC 1 cut(s) 1412
BarI GAAGNNNNNNTAC 4 cut(s) 1245, 1277, 1890, 1922
BbrPI CACGTG 1 cut(s) 2493
BbsI GAAGAC 1 cut(s) 328
BbvCI CCTCAGC 2 cut(s) 245, 1347
BbvI GCAGC 5 cut(s) 176, 225, 261, 1363, 2490
BccI CCATC 3 cut(s) 364, 482, 1126
BciT130I CCWGG 2 cut(s) 157, 1007
BciVI GTATCC 1 cut(s) 1697
BcnI CCSGG 1 cut(s) 418
BcoDI GTCTC 3 cut(s) 293, 708, 797
BfaI CTAG 6 cut(s) 474, 870, 1616, 2034, 2150, 2468
BfmI CTRYAG 1 cut(s) 66
BfuI GTATCC 1 cut(s) 1697
BglII AGATCT 1 cut(s) 2152
BisI GCNGC 6 cut(s) 190, 214, 250, 1352, 1720, 2504
BlnI CCTAGG 1 cut(s) 2467
BlsI GCNGC 6 cut(s) 191, 215, 251, 1353, 1721, 2505
BmcAI AGTACT 1 cut(s) 181
Bme1390I CCNGG 3 cut(s) 157, 418, 1007
Bme18I GGWCC 1 cut(s) 1795
BmgBI CACGTC 1 cut(s) 1012
BmgT120I GGNCC 3 cut(s) 671, 1343, 1795
BmiI GGNNCC 6 cut(s) 750, 892, 964, 1226, 1414, 2110
BmrFI CCNGG 3 cut(s) 157, 418, 1007
BmrI ACTGGG 1 cut(s) 1063
BmuI ACTGGG 1 cut(s) 1063
BpiI GAAGAC 1 cut(s) 328
Bpu10I CCTNAGC 2 cut(s) 245, 1347
Bpu14I TTCGAA 1 cut(s) 1508
BpuEI CTTGAG 6 cut(s) 329, 808, 1786, 1999, 2288, 2332
BpuMI CCSGG 1 cut(s) 418
BsaAI YACGTR 2 cut(s) 136, 2493
BsaHI GRCGYC 1 cut(s) 1937
BsaJI CCNNGG 3 cut(s) 155, 403, 2467
BsaWI WCCGGW 2 cut(s) 745, 877
Bsc4I CCNNNNNNNGG 6 cut(s) 322, 884, 1234, 1340, 1966, 2005
Bse118I RCCGGY 2 cut(s) 2041, 2548
Bse1I ACTGG 8 cut(s) 605, 737, 964, 1058, 1416, 2143, 2248, 2320
Bse21I CCTNAGG 1 cut(s) 1911
Bse3DI GCAATG 2 cut(s) 946, 2195
BseAI TCCGGA 1 cut(s) 877
BseBI CCWGG 2 cut(s) 157, 1007
BseDI CCNNGG 3 cut(s) 155, 403, 2467
BseGI GGATG 2 cut(s) 60, 2477
BseLI CCNNNNNNNGG 6 cut(s) 322, 884, 1234, 1340, 1966, 2005
BseMI GCAATG 2 cut(s) 946, 2195
BseMII CTCAG 5 cut(s) 259, 374, 626, 1361, 2311
BseNI ACTGG 8 cut(s) 605, 737, 964, 1058, 1416, 2143, 2248, 2320
BseRI GAGGAG 2 cut(s) 1125, 1684
BseXI GCAGC 5 cut(s) 176, 225, 261, 1363, 2490
BseYI CCCAGC 1 cut(s) 811
BshFI GGCC 8 cut(s) 326, 672, 1344, 1542, 1719, 1821, 2319, 2497
BshNI GGYRCC 1 cut(s) 1412
BsiSI CCGG 5 cut(s) 417, 746, 878, 2042, 2549
BslFI GGGAC 3 cut(s) 1172, 1983, 2460
BslI CCNNNNNNNGG 6 cut(s) 322, 884, 1234, 1340, 1966, 2005
BsmAI GTCTC 3 cut(s) 293, 708, 797
BsmFI GGGAC 3 cut(s) 1172, 1983, 2460
BsnI GGCC 8 cut(s) 326, 672, 1344, 1542, 1719, 1821, 2319, 2497
Bsp119I TTCGAA 1 cut(s) 1508
Bsp13I TCCGGA 1 cut(s) 877
Bsp19I CCATGG 1 cut(s) 403
BspACI CCGC 3 cut(s) 1720, 2186, 2207
BspANI GGCC 8 cut(s) 326, 672, 1344, 1542, 1719, 1821, 2319, 2497
BspCNI CTCAG 5 cut(s) 258, 375, 627, 1360, 2310
BspEI TCCGGA 1 cut(s) 877
BspLI GGNNCC 6 cut(s) 750, 892, 964, 1226, 1414, 2110
BspMAI CTGCAG 1 cut(s) 70
BspPI GGATC 5 cut(s) 137, 750, 957, 970, 2439
BspT104I TTCGAA 1 cut(s) 1508
BspT107I GGYRCC 1 cut(s) 1412
BsrDI GCAATG 2 cut(s) 946, 2195
BsrFI RCCGGY 2 cut(s) 2041, 2548
BsrI ACTGG 8 cut(s) 605, 737, 964, 1058, 1416, 2143, 2248, 2320
BssAI RCCGGY 2 cut(s) 2041, 2548
BssECI CCNNGG 3 cut(s) 155, 403, 2467
BssNAI GTATAC 1 cut(s) 133
BssNI GRCGYC 1 cut(s) 1937
BssT1I CCWWGG 2 cut(s) 403, 2467
Bst1107I GTATAC 1 cut(s) 133
Bst2UI CCWGG 2 cut(s) 157, 1007
Bst4CI ACNGT 2 cut(s) 1215, 1930
Bst6I CTCTTC 4 cut(s) 296, 1213, 1629, 1860
BstACI GRCGYC 1 cut(s) 1937
BstBAI YACGTR 2 cut(s) 136, 2493
BstBI TTCGAA 1 cut(s) 1508
BstC8I GCNNGC 1 cut(s) 527
BstDEI CTNAG 6 cut(s) 245, 383, 635, 1347, 1911, 2297
BstDSI CCRYGG 1 cut(s) 403
BstF5I GGATG 2 cut(s) 60, 2477
BstMAI GTCTC 3 cut(s) 293, 708, 797
BstMWI GCNNNNNNNGC 2 cut(s) 2278, 2503
BstNI CCWGG 2 cut(s) 157, 1007
BstNSI RCATGY 1 cut(s) 529
BstSCI CCNGG 3 cut(s) 155, 416, 1005
BstSFI CTRYAG 1 cut(s) 66
BstSNI TACGTA 1 cut(s) 136
BstV1I GCAGC 5 cut(s) 176, 225, 261, 1363, 2490
BstV2I GAAGAC 1 cut(s) 328
BstX2I RGATCY 4 cut(s) 755, 962, 2152, 2444
BstXI CCANNNNNNTGG 1 cut(s) 2537
BstYI RGATCY 4 cut(s) 755, 962, 2152, 2444
BstZ17I GTATAC 1 cut(s) 133
Bsu36I CCTNAGG 1 cut(s) 1911
BsuI GTATCC 1 cut(s) 1697
BsuRI GGCC 8 cut(s) 326, 672, 1344, 1542, 1719, 1821, 2319, 2497
BtgI CCRYGG 1 cut(s) 403
BtrI CACGTC 1 cut(s) 1012
BtsCI GGATG 2 cut(s) 60, 2477
BtsI GCAGTG 1 cut(s) 623
BtsIMutI CAGTG 6 cut(s) 623, 957, 1051, 1330, 1345, 2241
Cac8I GCNNGC 1 cut(s) 527
Cfr10I RCCGGY 2 cut(s) 2041, 2548
Cfr13I GGNCC 3 cut(s) 671, 1343, 1795
Csp6I GTAC 2 cut(s) 180, 1413
CspCI CAANNNNNGTGG 2 cut(s) 1306, 1341
CviAII CATG 8 cut(s) 168, 264, 404, 526, 973, 1017, 2105, 2568
CviQI GTAC 2 cut(s) 180, 1413
DdeI CTNAG 6 cut(s) 245, 383, 635, 1347, 1911, 2297
DraI TTTAAA 1 cut(s) 2364
EaeI YGGCCR 2 cut(s) 324, 1717
Eam1104I CTCTTC 4 cut(s) 296, 1213, 1629, 1860
EarI CTCTTC 4 cut(s) 296, 1213, 1629, 1860
Eco105I TACGTA 1 cut(s) 136
Eco130I CCWWGG 2 cut(s) 403, 2467
Eco32I GATATC 1 cut(s) 582
Eco47I GGWCC 1 cut(s) 1795
Eco57I CTGAAG 6 cut(s) 683, 1072, 1306, 1415, 1694, 1949
Eco72I CACGTG 1 cut(s) 2493
Eco81I CCTNAGG 1 cut(s) 1911
EcoRI GAATTC 1 cut(s) 172
EcoRII CCWGG 2 cut(s) 155, 1005
EcoRV GATATC 1 cut(s) 582
EcoT14I CCWWGG 2 cut(s) 403, 2467
ErhI CCWWGG 2 cut(s) 403, 2467
FaeI CATG 8 cut(s) 171, 267, 407, 529, 976, 1020, 2108, 2571
FaqI GGGAC 3 cut(s) 1172, 1983, 2460
FatI CATG 8 cut(s) 167, 263, 403, 525, 972, 1016, 2104, 2567
FauNDI CATATG 1 cut(s) 1699
FblI GTMKAC 2 cut(s) 132, 2038
Fnu4HI GCNGC 6 cut(s) 190, 214, 250, 1352, 1720, 2504
FokI GGATG 2 cut(s) 47, 2484
Fsp4HI GCNGC 6 cut(s) 190, 214, 250, 1352, 1720, 2504
FspBI CTAG 6 cut(s) 474, 870, 1616, 2034, 2150, 2468
GluI GCNGC 6 cut(s) 190, 214, 250, 1352, 1720, 2504
GsaI CCCAGC 1 cut(s) 815
HaeIII GGCC 8 cut(s) 326, 672, 1344, 1542, 1719, 1821, 2319, 2497
HapII CCGG 5 cut(s) 417, 746, 878, 2042, 2549
Hin1I GRCGYC 1 cut(s) 1937
Hin1II CATG 8 cut(s) 171, 267, 407, 529, 976, 1020, 2108, 2571
HincII GTYRAC 2 cut(s) 1003, 2341
HindII GTYRAC 2 cut(s) 1003, 2341
HindIII AAGCTT 1 cut(s) 695
HinfI GANTC 9 cut(s) 569, 683, 790, 1473, 1534, 1581, 1678, 1867, 2197
HpaII CCGG 5 cut(s) 417, 746, 878, 2042, 2549
HphI GGTGA 1 cut(s) 2552
Hpy166II GTNNAC 6 cut(s) 73, 133, 1003, 1779, 2039, 2341
Hpy8I GTNNAC 6 cut(s) 73, 133, 1003, 1779, 2039, 2341
HpyAV CCTTC 9 cut(s) 159, 855, 1238, 1247, 1435, 1439, 1714, 1718, 1958
HpyCH4III ACNGT 2 cut(s) 1215, 1930
HpyCH4IV ACGT 6 cut(s) 135, 333, 1011, 1937, 2492, 2555
HpyF10VI GCNNNNNNNGC 2 cut(s) 2278, 2503
HpyF3I CTNAG 6 cut(s) 245, 383, 635, 1347, 1911, 2297
HpySE526I ACGT 6 cut(s) 135, 333, 1011, 1937, 2492, 2555
Hsp92I GRCGYC 1 cut(s) 1937
Hsp92II CATG 8 cut(s) 171, 267, 407, 529, 976, 1020, 2108, 2571
Kpn2I TCCGGA 1 cut(s) 877
KpnI GGTACC 1 cut(s) 1416
LmnI GCTCC 2 cut(s) 748, 1906
Lsp1109I GCAGC 5 cut(s) 176, 225, 261, 1363, 2490
MaeI CTAG 6 cut(s) 474, 870, 1616, 2034, 2150, 2468
MaeII ACGT 6 cut(s) 135, 333, 1011, 1937, 2492, 2555
MaeIII GTNAC 8 cut(s) 205, 596, 680, 803, 1215, 1877, 1933, 1938
MfeI CAATTG 4 cut(s) 79, 978, 995, 1831
MflI RGATCY 4 cut(s) 755, 962, 2152, 2444
MlsI TGGCCA 1 cut(s) 326
MluNI TGGCCA 1 cut(s) 326
MlyI GAGTC 5 cut(s) 677, 799, 1467, 1575, 2191
MmeI TCCRAC 3 cut(s) 214, 319, 2472
Mox20I TGGCCA 1 cut(s) 326
MroI TCCGGA 1 cut(s) 877
MroXI GAANNNNTTC 3 cut(s) 1025, 1363, 1623
MscI TGGCCA 1 cut(s) 326
MslI CAYNNNNRTG 1 cut(s) 2535
Msp20I TGGCCA 1 cut(s) 326
MspI CCGG 5 cut(s) 417, 746, 878, 2042, 2549
MspR9I CCNGG 3 cut(s) 157, 418, 1007
MunI CAATTG 4 cut(s) 79, 978, 995, 1831
MvaI CCWGG 2 cut(s) 157, 1007
MwoI GCNNNNNNNGC 2 cut(s) 2278, 2503
NciI CCSGG 1 cut(s) 418
NcoI CCATGG 1 cut(s) 403
NdeI CATATG 1 cut(s) 1699
NlaIII CATG 8 cut(s) 171, 267, 407, 529, 976, 1020, 2108, 2571
NlaIV GGNNCC 6 cut(s) 750, 892, 964, 1226, 1414, 2110
NmuCI GTSAC 4 cut(s) 596, 680, 1933, 1938
NspI RCATGY 1 cut(s) 529
NspV TTCGAA 1 cut(s) 1508
PaeI GCATGC 1 cut(s) 529
PdmI GAANNNNTTC 3 cut(s) 1025, 1363, 1623
PfeI GAWTC 4 cut(s) 569, 1534, 1678, 1867
PflMI CCANNNNNTGG 1 cut(s) 2005
PkrI GCNGC 6 cut(s) 191, 215, 251, 1353, 1721, 2505
PleI GAGTC 5 cut(s) 677, 798, 1467, 1575, 2191
PmaCI CACGTG 1 cut(s) 2493
PmlI CACGTG 1 cut(s) 2493
PpsI GAGTC 5 cut(s) 677, 798, 1467, 1575, 2191
Ppu21I YACGTR 2 cut(s) 136, 2493
PsiI TTATAA 2 cut(s) 1407, 1599
Psp6I CCWGG 2 cut(s) 155, 1005
PspCI CACGTG 1 cut(s) 2493
PspFI CCCAGC 1 cut(s) 811
PspGI CCWGG 2 cut(s) 155, 1005
PspN4I GGNNCC 6 cut(s) 750, 892, 964, 1226, 1414, 2110
PspPI GGNCC 3 cut(s) 671, 1343, 1795
PstI CTGCAG 1 cut(s) 70
PsuI RGATCY 4 cut(s) 755, 962, 2152, 2444
RsaI GTAC 2 cut(s) 181, 1414
RsaNI GTAC 2 cut(s) 180, 1413
RseI CAYNNNNRTG 1 cut(s) 2535
SatI GCNGC 6 cut(s) 190, 214, 250, 1352, 1720, 2504
Sau96I GGNCC 3 cut(s) 671, 1343, 1795
ScaI AGTACT 1 cut(s) 181
SchI GAGTC 5 cut(s) 677, 799, 1467, 1575, 2191
ScrFI CCNGG 3 cut(s) 157, 418, 1007
SfcI CTRYAG 1 cut(s) 66
SfuI TTCGAA 1 cut(s) 1508
SinI GGWCC 1 cut(s) 1795
SmiMI CAYNNNNRTG 1 cut(s) 2535
SmlI CTYRAG 6 cut(s) 308, 787, 1765, 2014, 2267, 2347
SmoI CTYRAG 6 cut(s) 308, 787, 1765, 2014, 2267, 2347
SnaBI TACGTA 1 cut(s) 136
SphI GCATGC 1 cut(s) 529
SsiI CCGC 3 cut(s) 1720, 2186, 2207
SspI AATATT 1 cut(s) 819
SspMI CTAG 6 cut(s) 474, 870, 1616, 2034, 2150, 2468
StyD4I CCNGG 3 cut(s) 155, 416, 1005
StyI CCWWGG 2 cut(s) 403, 2467
TaaI ACNGT 2 cut(s) 1215, 1930
TaiI ACGT 6 cut(s) 138, 336, 1014, 1940, 2495, 2558
TaqI TCGA 2 cut(s) 1357, 1508
TatI WGTACW 1 cut(s) 179
TauI GCSGC 1 cut(s) 1722
TfiI GAWTC 4 cut(s) 569, 1534, 1678, 1867
TscAI CASTG 6 cut(s) 630, 964, 1058, 1330, 1345, 2248
TseFI GTSAC 4 cut(s) 596, 680, 1933, 1938
TseI GCWGC 5 cut(s) 189, 213, 249, 1351, 2503
Tsp45I GTSAC 4 cut(s) 596, 680, 1933, 1938
TspDTI ATGAA 3 cut(s) 252, 1356, 1940
TspGWI ACGGA 2 cut(s) 696, 2388
TspRI CASTG 6 cut(s) 630, 964, 1058, 1330, 1345, 2248
Van91I CCANNNNNTGG 1 cut(s) 2005
VpaK11BI GGWCC 1 cut(s) 1795
XapI RAATTY 6 cut(s) 172, 351, 423, 517, 1193, 1812
XbaI TCTAGA 3 cut(s) 473, 1615, 2149
XceI RCATGY 1 cut(s) 529
XmaJI CCTAGG 1 cut(s) 2467
XmiI GTMKAC 2 cut(s) 132, 2038
XmnI GAANNNNTTC 3 cut(s) 1025, 1363, 1623
XspI CTAG 6 cut(s) 474, 870, 1616, 2034, 2150, 2468
ZraI GACGTC 1 cut(s) 1938
ZrmI AGTACT 1 cut(s) 181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.