RchiOBHm_Chr3g0478511

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
24257733 .. 24260238
2506 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44369

Sequence Viewer

Length: 1449 bp
ATGTTGTTCGGAAGTCGTCGTAATCCGGCGTTTCCATTCTCGTCCTACATCACGGTTGATCTTCATTCAAACAAGCTTCAGGGACATTTCCCCTTGTTCTTCATTAGTAGTTATCTAGATTATTCGAGAAATAATTTCAGCTCTAGTATACCGACTGACATTGGTGACTTCATTTCTACTGAGTCTTACCTTTCTCTTTCAAGCAATAACTTTCACGGGGCCATTCCAAAATCAATATGCAATGCAAGTGGCAAGGTTCTTGATCTGTCCAATAATTCCTTAAGTGGAAACATTCCCCAATGCTTGACTCAATTGCCTCAGCTTTCGGTCATTGATTTGAAGAGAAACAACCTGAGTGGCACAATTCCGGATAATTTTTTCAACATTTGTGAGCTACAAACTCTAGACCTCAGTAACAATCAGATACAAGGCAAGTTTCCGAAATCTCTTGTCAACTGCTCAAAGTTAGAGGTTTTAAACATTGGAAACAATAACATAGCTGATACTTTTCCATGCTTTTTAATGAGCTTATCCACCTTGCATATCCTTGTTTTGCGGTCCAACAAGTTTTATGGAAACATTGGATGTCCCAAGACCAGTGGCACATGGCCTGTGCTTCAAATAATAGATTTAGCTCACAACAATTTTAGTGGTGATATGCCAGGAAGAATGTCTCTGACATGGCAGGCTATGGTGTCTAATGAGGATGATTCTCCAACTGAACTTGGATTTTTTGGATTTTCTTATCAGTGCGAGAGTCAATATAGTAGAATTTGTTATCCAGTTTATTATAAAGATGCAATTACGGCTAGTATCAAAGGTTTAGAGTTGGATGTGGTTAAGATTTTAACTATATTCACCTTGATTGACTACTCCTCCAACAAATTCAACGGATCAATACCTGAGGAAATTGGAGAGTTGAAATCACTATATGTCCTCAACTTATCAGGTAATGCTTTCACCGGAAAAATCCCATCATCATTTGGTAAGATGCGGCAATTGGAGTCCTTAGATCTCTCAAAGAACCACTTGAGCGGCCAAATTCCCCCCGAGTTTGCAAATCTCAATTTCCTTTCGCACTTGAATGTCTCATATAATCAACTGACGGGAAGGATCCCAACCAACACTCAGCTTTCGACATTTCCAAGTACCTCCTTCGAGGGTAATAAAGGATTATGGGGGCCTCCTCTGACATCGGATACAGCAATCGTATTGCCACCTCCAAAGTTGAATGGAGATGAGATTGATTGGAATGTTATCAGTGCTGAAATTGGATTTACATGTGGGTTTGGAATTGCCGTCGGGTCACTTTTGTTTTGCAAGAGATGGAGTAAATGGTACTACAGAGCCATGTTTAACATCCTGTTCAAGATATTCCCAAAGCTGGAACACAGATTTGGTAATCACAGAAGGCATGTTTACATAAATCAAAGGTATTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

482

Amino Acids

54.13

Weight (kDa)

8.41

Isoelectric Point (pI)

41.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 85 - 186 3e-06 Leucine-rich repeat region
LRR_8 PF13855 107 - 166 5.1e-09 Leucine rich repeat
LRR_8 PF13855 131 - 190 6.1e-07 Leucine rich repeat
LRR_4 PF12799 131 - 168 9.5e-08 Leucine Rich repeats (2 copies)
LRR_14 PF23598 299 - 363 2.3e-07 Leucine-rich repeat region
LRR_8 PF13855 309 - 368 3.3e-09 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 792
AccBSI CCGCTC 1 cut(s) 1035
AccI GTMKAC 1 cut(s) 148
AccIII TCCGGA 1 cut(s) 367
AciI CCGC 3 cut(s) 556, 994, 1035
AclWI GGATC 3 cut(s) 901, 1108, 1121
AcoI YGGCCR 1 cut(s) 1036
AcsI RAATTY 3 cut(s) 771, 884, 1041
AcuI CTGAAG 1 cut(s) 62
AfaI GTAC 2 cut(s) 1150, 1340
AfiI CCNNNNNNNGG 1 cut(s) 1384
AflII CTTAAG 1 cut(s) 280
AflIII ACRYGT 1 cut(s) 1280
AjnI CCWGG 1 cut(s) 661
AjuI GAANNNNNNNTTGG 2 cut(s) 1380, 1412
AluBI AGCT 9 cut(s) 76, 141, 322, 394, 500, 528, 635, 1132, 1384
AluI AGCT 9 cut(s) 76, 141, 322, 394, 500, 528, 635, 1132, 1384
Alw26I GTCTC 3 cut(s) 678, 1093, 1435
AlwI GGATC 3 cut(s) 901, 1108, 1121
Ama87I CYCGRG 1 cut(s) 1049
Aor13HI TCCGGA 1 cut(s) 367
AoxI GGCC 4 cut(s) 219, 608, 1036, 1181
ApoI RAATTY 3 cut(s) 771, 884, 1041
AspS9I GGNCC 3 cut(s) 219, 558, 1181
AsuHPI GGTGA 4 cut(s) 176, 665, 850, 952
AvaI CYCGRG 1 cut(s) 1049
AvaII GGWCC 1 cut(s) 558
AxyI CCTNAGG 1 cut(s) 903
BamHI GGATCC 1 cut(s) 1113
BbvCI CCTCAGC 1 cut(s) 318
BccI CCATC 2 cut(s) 982, 1320
BceAI ACGGC 2 cut(s) 822, 1283
BciT130I CCWGG 1 cut(s) 663
BciVI GTATCC 1 cut(s) 1192
BcoDI GTCTC 3 cut(s) 678, 1093, 1435
BfaI CTAG 4 cut(s) 116, 144, 404, 810
BfmI CTRYAG 1 cut(s) 1342
BfrI CTTAAG 1 cut(s) 280
BfuI GTATCC 1 cut(s) 1192
BglII AGATCT 1 cut(s) 1012
BisI GCNGC 2 cut(s) 995, 1036
BlsI GCNGC 2 cut(s) 996, 1037
Bme1390I CCNGG 1 cut(s) 663
Bme18I GGWCC 1 cut(s) 558
BmeT110I CYCGRG 1 cut(s) 1049
BmgT120I GGNCC 3 cut(s) 219, 558, 1181
BmiI GGNNCC 3 cut(s) 220, 1115, 1182
BmrFI CCNGG 1 cut(s) 663
BmsI GCATC 2 cut(s) 787, 981
Bpu10I CCTNAGC 1 cut(s) 318
BpuEI CTTGAG 1 cut(s) 1051
BsaWI WCCGGW 2 cut(s) 367, 962
BsaXI ACNNNNNCTCC 2 cut(s) 860, 890
Bsc4I CCNNNNNNNGG 1 cut(s) 1384
Bse1I ACTGG 2 cut(s) 597, 782
Bse21I CCTNAGG 1 cut(s) 903
Bse3DI GCAATG 1 cut(s) 247
BseAI TCCGGA 1 cut(s) 367
BseBI CCWGG 1 cut(s) 663
BseGI GGATG 4 cut(s) 590, 712, 838, 1359
BseLI CCNNNNNNNGG 1 cut(s) 1384
BseMI GCAATG 1 cut(s) 247
BseMII CTCAG 6 cut(s) 171, 332, 344, 424, 894, 1142
BseNI ACTGG 2 cut(s) 597, 782
BseRI GAGGAG 2 cut(s) 865, 1176
BshFI GGCC 4 cut(s) 221, 610, 1038, 1183
BsiHKCI CYCGRG 1 cut(s) 1049
BsiSI CCGG 3 cut(s) 26, 368, 963
BslFI GGGAC 2 cut(s) 96, 573
BslI CCNNNNNNNGG 1 cut(s) 1384
BsmAI GTCTC 3 cut(s) 678, 1093, 1435
BsmBI CGTCTC 1 cut(s) 1435
BsmFI GGGAC 2 cut(s) 96, 573
BsnI GGCC 4 cut(s) 221, 610, 1038, 1183
BsoBI CYCGRG 1 cut(s) 1049
Bsp13I TCCGGA 1 cut(s) 367
Bsp143I GATC 5 cut(s) 58, 262, 893, 1012, 1113
BspACI CCGC 3 cut(s) 556, 994, 1035
BspANI GGCC 4 cut(s) 221, 610, 1038, 1183
BspCNI CTCAG 6 cut(s) 172, 331, 345, 423, 895, 1141
BspEI TCCGGA 1 cut(s) 367
BspLI GGNNCC 3 cut(s) 220, 1115, 1182
BspPI GGATC 3 cut(s) 901, 1108, 1121
BspTI CTTAAG 1 cut(s) 280
BsrBI CCGCTC 1 cut(s) 1035
BsrDI GCAATG 1 cut(s) 247
BsrI ACTGG 2 cut(s) 597, 782
BssMI GATC 5 cut(s) 58, 262, 893, 1012, 1113
BssNAI GTATAC 1 cut(s) 149
Bst1107I GTATAC 1 cut(s) 149
Bst2UI CCWGG 1 cut(s) 663
Bst4CI ACNGT 1 cut(s) 55
Bst6I CTCTTC 1 cut(s) 335
BstAFI CTTAAG 1 cut(s) 280
BstC8I GCNNGC 1 cut(s) 687
BstDEI CTNAG 7 cut(s) 180, 318, 353, 410, 903, 1009, 1128
BstF5I GGATG 4 cut(s) 590, 712, 838, 1359
BstKTI GATC 5 cut(s) 61, 265, 896, 1015, 1116
BstMAI GTCTC 3 cut(s) 678, 1093, 1435
BstMBI GATC 5 cut(s) 58, 262, 893, 1012, 1113
BstMWI GCNNNNNNNGC 1 cut(s) 806
BstNI CCWGG 1 cut(s) 663
BstNSI RCATGY 2 cut(s) 1284, 1418
BstSCI CCNGG 1 cut(s) 661
BstSFI CTRYAG 1 cut(s) 1342
BstX2I RGATCY 2 cut(s) 1012, 1113
BstYI RGATCY 2 cut(s) 1012, 1113
BstZ17I GTATAC 1 cut(s) 149
Bsu36I CCTNAGG 1 cut(s) 903
BsuI GTATCC 1 cut(s) 1192
BsuRI GGCC 4 cut(s) 221, 610, 1038, 1183
BtsCI GGATG 4 cut(s) 590, 712, 838, 1359
BtsIMutI CAGTG 3 cut(s) 604, 755, 1267
Cac8I GCNNGC 1 cut(s) 687
Cfr13I GGNCC 3 cut(s) 219, 558, 1181
Csp6I GTAC 2 cut(s) 1149, 1339
CspCI CAANNNNNGTGG 8 cut(s) 229, 264, 337, 372, 580, 615, 631, 666
CviAII CATG 6 cut(s) 513, 606, 681, 1281, 1351, 1415
CviQI GTAC 2 cut(s) 1149, 1339
DdeI CTNAG 7 cut(s) 180, 318, 353, 410, 903, 1009, 1128
DpnI GATC 5 cut(s) 60, 264, 895, 1014, 1115
DpnII GATC 5 cut(s) 58, 262, 893, 1012, 1113
DraI TTTAAA 1 cut(s) 477
EaeI YGGCCR 1 cut(s) 1036
Eam1104I CTCTTC 1 cut(s) 335
EarI CTCTTC 1 cut(s) 335
Eco47I GGWCC 1 cut(s) 558
Eco57I CTGAAG 1 cut(s) 62
Eco81I CCTNAGG 1 cut(s) 903
Eco88I CYCGRG 1 cut(s) 1049
EcoO109I RGGNCCY 1 cut(s) 1181
EcoRII CCWGG 1 cut(s) 661
Esp3I CGTCTC 1 cut(s) 1435
FaeI CATG 6 cut(s) 516, 609, 684, 1284, 1354, 1418
FalI AAGNNNNNCTT 2 cut(s) 1013, 1045
FaqI GGGAC 2 cut(s) 96, 573
FatI CATG 6 cut(s) 512, 605, 680, 1280, 1350, 1414
FblI GTMKAC 1 cut(s) 148
Fnu4HI GCNGC 2 cut(s) 995, 1036
FokI GGATG 4 cut(s) 597, 719, 845, 1346
Fsp4HI GCNGC 2 cut(s) 995, 1036
FspBI CTAG 4 cut(s) 116, 144, 404, 810
GluI GCNGC 2 cut(s) 995, 1036
HaeIII GGCC 4 cut(s) 221, 610, 1038, 1183
HapII CCGG 3 cut(s) 26, 368, 963
Hin1II CATG 6 cut(s) 516, 609, 684, 1284, 1354, 1418
HincII GTYRAC 1 cut(s) 454
HindII GTYRAC 1 cut(s) 454
HindIII AAGCTT 1 cut(s) 74
HinfI GANTC 5 cut(s) 182, 307, 710, 757, 1004
HpaII CCGG 3 cut(s) 26, 368, 963
HphI GGTGA 4 cut(s) 176, 665, 850, 952
Hpy166II GTNNAC 3 cut(s) 149, 454, 1420
Hpy188I TCNGA 6 cut(s) 11, 423, 441, 678, 1191, 1198
Hpy188III TCNNGA 6 cut(s) 116, 126, 260, 368, 404, 1369
Hpy8I GTNNAC 3 cut(s) 149, 454, 1420
Hpy99I CGWCG 2 cut(s) 21, 1304
HpyAV CCTTC 3 cut(s) 1104, 1165, 1404
HpyCH4III ACNGT 1 cut(s) 55
HpyCH4IV ACGT 1 cut(s) 1444
HpyCH4V TGCA 6 cut(s) 240, 245, 541, 800, 1058, 1320
HpyF10VI GCNNNNNNNGC 1 cut(s) 806
HpyF3I CTNAG 7 cut(s) 180, 318, 353, 410, 903, 1009, 1128
HpySE526I ACGT 1 cut(s) 1444
Hsp92II CATG 6 cut(s) 516, 609, 684, 1284, 1354, 1418
Kpn2I TCCGGA 1 cut(s) 367
Kzo9I GATC 5 cut(s) 58, 262, 893, 1012, 1113
LweI GCATC 2 cut(s) 787, 981
MaeI CTAG 4 cut(s) 116, 144, 404, 810
MaeII ACGT 1 cut(s) 1444
MaeIII GTNAC 3 cut(s) 164, 413, 1305
MalI GATC 5 cut(s) 60, 264, 895, 1014, 1115
MbiI CCGCTC 1 cut(s) 1035
MboI GATC 5 cut(s) 58, 262, 893, 1012, 1113
MboII GAAGA 4 cut(s) 53, 91, 352, 678
MfeI CAATTG 2 cut(s) 311, 998
MflI RGATCY 2 cut(s) 1012, 1113
MlyI GAGTC 4 cut(s) 191, 301, 766, 1013
MmeI TCCRAC 4 cut(s) 585, 740, 810, 903
MroI TCCGGA 1 cut(s) 367
MseI TTAA 6 cut(s) 281, 476, 521, 840, 848, 1356
MslI CAYNNNNRTG 1 cut(s) 1083
MspCI CTTAAG 1 cut(s) 280
MspI CCGG 3 cut(s) 26, 368, 963
MspR9I CCNGG 1 cut(s) 663
MunI CAATTG 2 cut(s) 311, 998
MvaI CCWGG 1 cut(s) 663
MwoI GCNNNNNNNGC 1 cut(s) 806
NdeII GATC 5 cut(s) 58, 262, 893, 1012, 1113
NlaIII CATG 6 cut(s) 516, 609, 684, 1284, 1354, 1418
NlaIV GGNNCC 3 cut(s) 220, 1115, 1182
NmuCI GTSAC 2 cut(s) 164, 1305
NspI RCATGY 2 cut(s) 1284, 1418
PciI ACATGT 1 cut(s) 1280
PfeI GAWTC 1 cut(s) 710
PkrI GCNGC 2 cut(s) 996, 1037
PleI GAGTC 4 cut(s) 190, 301, 765, 1012
PpsI GAGTC 4 cut(s) 190, 301, 765, 1012
PscI ACATGT 1 cut(s) 1280
PsiI TTATAA 1 cut(s) 792
Psp6I CCWGG 1 cut(s) 661
PspGI CCWGG 1 cut(s) 661
PspN4I GGNNCC 3 cut(s) 220, 1115, 1182
PspPI GGNCC 3 cut(s) 219, 558, 1181
PsuI RGATCY 2 cut(s) 1012, 1113
RsaI GTAC 2 cut(s) 1150, 1340
RsaNI GTAC 2 cut(s) 1149, 1339
RseI CAYNNNNRTG 1 cut(s) 1083
SaqAI TTAA 6 cut(s) 281, 476, 521, 840, 848, 1356
SatI GCNGC 2 cut(s) 995, 1036
Sau3AI GATC 5 cut(s) 58, 262, 893, 1012, 1113
Sau96I GGNCC 3 cut(s) 219, 558, 1181
SchI GAGTC 4 cut(s) 191, 301, 766, 1013
ScrFI CCNGG 1 cut(s) 663
SfaNI GCATC 2 cut(s) 787, 981
SfcI CTRYAG 1 cut(s) 1342
SinI GGWCC 1 cut(s) 558
SmiMI CAYNNNNRTG 1 cut(s) 1083
SmlI CTYRAG 2 cut(s) 280, 1030
SmoI CTYRAG 2 cut(s) 280, 1030
SsiI CCGC 3 cut(s) 556, 994, 1035
SspMI CTAG 4 cut(s) 116, 144, 404, 810
StyD4I CCNGG 1 cut(s) 661
TaaI ACNGT 1 cut(s) 55
TaiI ACGT 1 cut(s) 1447
TaqI TCGA 3 cut(s) 125, 1136, 1158
TaqII GACCGA 1 cut(s) 316
TauI GCSGC 2 cut(s) 997, 1038
TfiI GAWTC 1 cut(s) 710
Tru1I TTAA 6 cut(s) 281, 476, 521, 840, 848, 1356
Tru9I TTAA 6 cut(s) 281, 476, 521, 840, 848, 1356
TscAI CASTG 3 cut(s) 604, 755, 1267
TseFI GTSAC 2 cut(s) 164, 1305
Tsp45I GTSAC 2 cut(s) 164, 1305
TspDTI ATGAA 3 cut(s) 53, 91, 160
TspGWI ACGGA 1 cut(s) 906
TspRI CASTG 3 cut(s) 604, 755, 1267
Vha464I CTTAAG 1 cut(s) 280
VpaK11BI GGWCC 1 cut(s) 558
XapI RAATTY 3 cut(s) 771, 884, 1041
XbaI TCTAGA 2 cut(s) 115, 403
XceI RCATGY 2 cut(s) 1284, 1418
XmiI GTMKAC 1 cut(s) 148
XspI CTAG 4 cut(s) 116, 144, 404, 810
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.