FvH4_4g15164

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000179
Physical Location & Seq
Reverse (-)
18744526 .. 18745818
1293 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g15164.t1

Sequence Viewer

Length: 1293 bp
ATGGCATTTTTCAAGAGTTTCAAGAAGGGCACAATCACTATCCTTGAAGACGCCAACGACGTTCAAAGTGATGGCACCACCTTATACACCTATCCTTCACTGACTGGGCCTCACGCCATCGAGACACCATCCTACGACGGTTCAGGTCATATTCCGCGGTGGACCTTCCAACAATCACGTTCGCTAGCCACCTTTCAACCAACCAAATCCACCAGCGAGAAGCGAAGCGCAGATGTATGGATGTTGAAGTCTGCCCATCATGATCAGAATGCTCCTCAGACACCGTTCGTACTTCTCAGCGATCGTATGTTCAATGGTTTAGTGCAATGGAGTGGGTTTCGTGCCAACGGAGCCTTCTCCTACACGGAACGTTATTGGGAGTGGTTAGAAGACATCTTAAGCCGAAATAGAGACCTCATCCACAAAACTGGCCTCTACCGAGCGGTGTTTGCATCGCTCTTCAGCTATGACCGTGTTGCGCCTGTGGTGCGGGCCTTCTGCGAGTATTGGTGCCCCAGCACGAATACTCTTCACACATCATGTGGCGAAATGTCTATTTCTTTGAGGGACTTGACATATATTTGTGGCTTGCCCATCACTGGAAGGTTTTACGACGAAGTTGTTCCACCTATCGAAGAATTTTCTGCCAAGGGTAAAGGAGGTGAATCGGTCATTCCCAAGAGTTGCAAGTTCTTATTTCTCGCATACCATAAGCTTTGCAAGGATGATAAAGGACAGAAGGTGAAGATCGTATCGTGGATCCAGTACTGGTACAAAGGAAGCGTGAGATACAAGAGGCCACCTGCCAAGAGTGTACGGAACAAGAAAGATGCGCCTCAAAACACATATAACCCATATGGCGAAATCCACGAGGTTCAAGCCCGAACTGATGACGATTCTGCACCATTTGATGACTTGGGCGTAGATGACGAAGACATAGAGTCTACTTACTTGGCTGCATTTTATGCGTGCTGGTTGTGTCTATTCGTCTTTCCCATGGACGATGCAGGCTTAATCCGACCTAGTGTGTTCAAAGTCGCCAGCAAAATGTCCCAAGGTTATCAATTCTGTGTAGCGATACCTGTGTTGGCCAACATTTATCAAGGCTTGAACGAGATTTCTGCTTCCAAGGACCCAGGGAATTGCTTGGCCACATTACCTTTTCACTACGTGTATGCGTGGTTGGCAGAGTACTTCGGCACCCATTTTTATTCTCCTCTTCCTGACAACTTTAAACCGAGCATGGTTCATTTTTCAAGGGCATTTTCGGCCAAGCATTTTGGAGATGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

431

Amino Acids

48.85

Weight (kDa)

6.86

Isoelectric Point (pI)

48.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 144 - 399 4e-21 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 811
Acc36I ACCTGC 1 cut(s) 811
AccB1I GGYRCC 3 cut(s) 74, 510, 1199
AccBSI CCGCTC 1 cut(s) 443
AccI GTMKAC 1 cut(s) 944
AccII CGCG 1 cut(s) 157
AciI CCGC 4 cut(s) 155, 157, 443, 490
AclI AACGTT 1 cut(s) 370
AclWI GGATC 2 cut(s) 754, 767
AcoI YGGCCR 3 cut(s) 1089, 1149, 1269
AcsI RAATTY 1 cut(s) 638
AcuI CTGAAG 1 cut(s) 445
AcyI GRCGYC 1 cut(s) 51
AdeI CACNNNGTG 1 cut(s) 1171
AfaI GTAC 5 cut(s) 291, 767, 773, 816, 1193
AfiI CCNNNNNNNGG 1 cut(s) 599
AflII CTTAAG 1 cut(s) 397
AflIII ACRYGT 1 cut(s) 1170
AhdI GACNNNNNGTC 1 cut(s) 940
AjnI CCWGG 1 cut(s) 1135
AjuI GAANNNNNNNTTGG 2 cut(s) 338, 370
AluBI AGCT 2 cut(s) 465, 715
AluI AGCT 2 cut(s) 465, 715
Alw26I GTCTC 2 cut(s) 116, 405
AlwI GGATC 2 cut(s) 754, 767
AoxI GGCC 7 cut(s) 107, 430, 492, 797, 1089, 1149, 1269
ApeKI GCWGC 1 cut(s) 956
ApoI RAATTY 1 cut(s) 638
Asp700I GAANNNNTTC 1 cut(s) 621
AspLEI GCGC 3 cut(s) 230, 481, 835
AspS9I GGNCC 4 cut(s) 107, 162, 492, 1132
AsuHPI GGTGA 2 cut(s) 674, 754
AsuNHI GCTAGC 1 cut(s) 184
AvaII GGWCC 2 cut(s) 162, 1132
BaeGI GKGCMC 2 cut(s) 32, 515
BaeI ACNNNNGTAYC 2 cut(s) 1070, 1103
BalI TGGCCA 2 cut(s) 1091, 1151
BamHI GGATCC 1 cut(s) 759
BanI GGYRCC 3 cut(s) 74, 510, 1199
BauI CACGAG 1 cut(s) 869
BbsI GAAGAC 3 cut(s) 54, 396, 939
BbvI GCAGC 1 cut(s) 943
BccI CCATC 5 cut(s) 65, 125, 136, 264, 602
BcgI CGANNNNNNTGC 2 cut(s) 1103, 1137
BciT130I CCWGG 1 cut(s) 1137
BclI TGATCA 1 cut(s) 262
BcoDI GTCTC 2 cut(s) 116, 405
BfaI CTAG 2 cut(s) 185, 1023
BfrI CTTAAG 1 cut(s) 397
BfuAI ACCTGC 1 cut(s) 811
BisI GCNGC 1 cut(s) 957
BlsI GCNGC 1 cut(s) 958
BmcAI AGTACT 2 cut(s) 767, 1193
Bme1390I CCNGG 1 cut(s) 1137
Bme18I GGWCC 2 cut(s) 162, 1132
BmeRI GACNNNNNGTC 1 cut(s) 940
BmgT120I GGNCC 4 cut(s) 107, 162, 492, 1132
BmiI GGNNCC 6 cut(s) 76, 352, 512, 761, 1134, 1201
BmrFI CCNGG 1 cut(s) 1137
BmrI ACTGGG 1 cut(s) 114
BmsI GCATC 4 cut(s) 461, 820, 994, 1276
BmtI GCTAGC 1 cut(s) 188
BmuI ACTGGG 1 cut(s) 114
BpiI GAAGAC 3 cut(s) 54, 396, 939
BsaAI YACGTR 1 cut(s) 1171
BsaHI GRCGYC 1 cut(s) 51
BsaI GGTCTC 1 cut(s) 405
BsaJI CCNNGG 7 cut(s) 155, 648, 996, 1054, 1128, 1135, 1136
Bsc4I CCNNNNNNNGG 1 cut(s) 599
Bse1I ACTGG 5 cut(s) 109, 433, 604, 763, 773
Bse3DI GCAATG 1 cut(s) 332
BseBI CCWGG 1 cut(s) 1137
BseDI CCNNGG 7 cut(s) 155, 648, 996, 1054, 1128, 1135, 1136
BseGI GGATG 4 cut(s) 128, 246, 417, 730
BseLI CCNNNNNNNGG 1 cut(s) 599
BseMI GCAATG 1 cut(s) 332
BseMII CTCAG 2 cut(s) 290, 310
BseNI ACTGG 5 cut(s) 109, 433, 604, 763, 773
BseRI GAGGAG 2 cut(s) 264, 1206
BseSI GKGCMC 2 cut(s) 32, 515
BseXI GCAGC 1 cut(s) 943
BseYI CCCAGC 1 cut(s) 515
BsgI GTGCAG 1 cut(s) 885
Bsh1236I CGCG 1 cut(s) 157
Bsh1285I CGRYCG 1 cut(s) 304
BshFI GGCC 7 cut(s) 109, 432, 494, 799, 1091, 1151, 1271
BshNI GGYRCC 3 cut(s) 74, 510, 1199
BsiEI CGRYCG 1 cut(s) 304
BslFI GGGAC 2 cut(s) 581, 1036
BslI CCNNNNNNNGG 1 cut(s) 599
BsmAI GTCTC 2 cut(s) 116, 405
BsmFI GGGAC 2 cut(s) 581, 1036
BsmI GAATGC 1 cut(s) 274
BsnI GGCC 7 cut(s) 109, 432, 494, 799, 1091, 1151, 1271
Bso31I GGTCTC 1 cut(s) 405
Bsp1286I GDGCHC 2 cut(s) 32, 515
Bsp143I GATC 4 cut(s) 262, 301, 747, 759
Bsp19I CCATGG 1 cut(s) 996
BspACI CCGC 4 cut(s) 155, 157, 443, 490
BspANI GGCC 7 cut(s) 109, 432, 494, 799, 1091, 1151, 1271
BspCNI CTCAG 2 cut(s) 289, 309
BspFNI CGCG 1 cut(s) 157
BspHI TCATGA 1 cut(s) 259
BspLI GGNNCC 6 cut(s) 76, 352, 512, 761, 1134, 1201
BspMI ACCTGC 1 cut(s) 811
BspOI GCTAGC 1 cut(s) 188
BspPI GGATC 2 cut(s) 754, 767
BspQI GCTCTTC 1 cut(s) 464
BspT107I GGYRCC 3 cut(s) 74, 510, 1199
BspTI CTTAAG 1 cut(s) 397
BspTNI GGTCTC 1 cut(s) 405
BsrBI CCGCTC 1 cut(s) 443
BsrDI GCAATG 1 cut(s) 332
BsrI ACTGG 5 cut(s) 109, 433, 604, 763, 773
BssECI CCNNGG 7 cut(s) 155, 648, 996, 1054, 1128, 1135, 1136
BssMI GATC 4 cut(s) 262, 301, 747, 759
BssNI GRCGYC 1 cut(s) 51
BssSI CACGAG 1 cut(s) 869
BssT1I CCWWGG 4 cut(s) 648, 996, 1054, 1128
Bst2BI CACGAG 1 cut(s) 869
Bst2UI CCWGG 1 cut(s) 1137
Bst4CI ACNGT 3 cut(s) 140, 285, 473
Bst6I CTCTTC 3 cut(s) 464, 534, 1224
BstACI GRCGYC 1 cut(s) 51
BstAFI CTTAAG 1 cut(s) 397
BstAPI GCANNNNNTGC 1 cut(s) 965
BstBAI YACGTR 1 cut(s) 1171
BstC8I GCNNGC 6 cut(s) 186, 492, 590, 970, 1009, 1042
BstDEI CTNAG 2 cut(s) 276, 296
BstDSI CCRYGG 2 cut(s) 155, 996
BstF5I GGATG 4 cut(s) 128, 246, 417, 730
BstFNI CGCG 1 cut(s) 157
BstHHI GCGC 3 cut(s) 230, 481, 835
BstKTI GATC 4 cut(s) 265, 304, 750, 762
BstMAI GTCTC 2 cut(s) 116, 405
BstMBI GATC 4 cut(s) 262, 301, 747, 759
BstMCI CGRYCG 1 cut(s) 304
BstMWI GCNNNNNNNGC 6 cut(s) 350, 449, 487, 965, 1184, 1268
BstNI CCWGG 1 cut(s) 1137
BstSCI CCNGG 1 cut(s) 1135
BstSLI GKGCMC 2 cut(s) 32, 515
BstUI CGCG 1 cut(s) 157
BstV1I GCAGC 1 cut(s) 943
BstV2I GAAGAC 3 cut(s) 54, 396, 939
BstX2I RGATCY 1 cut(s) 759
BstXI CCANNNNNNTGG 1 cut(s) 428
BstYI RGATCY 1 cut(s) 759
BsuRI GGCC 7 cut(s) 109, 432, 494, 799, 1091, 1151, 1271
BtgI CCRYGG 2 cut(s) 155, 996
BtgZI GCGATG 1 cut(s) 438
BtsCI GGATG 4 cut(s) 128, 246, 417, 730
BtsIMutI CAGTG 2 cut(s) 98, 597
BveI ACCTGC 1 cut(s) 811
Cac8I GCNNGC 6 cut(s) 186, 492, 590, 970, 1009, 1042
CciI TCATGA 1 cut(s) 259
CfoI GCGC 3 cut(s) 230, 481, 835
Cfr13I GGNCC 4 cut(s) 107, 162, 492, 1132
Cfr42I CCGCGG 1 cut(s) 158
CseI GACGC 1 cut(s) 59
Csp6I GTAC 5 cut(s) 290, 766, 772, 815, 1192
CviAII CATG 4 cut(s) 260, 540, 997, 1243
CviQI GTAC 5 cut(s) 290, 766, 772, 815, 1192
DdeI CTNAG 2 cut(s) 276, 296
DpnI GATC 4 cut(s) 264, 303, 749, 761
DpnII GATC 4 cut(s) 262, 301, 747, 759
DraI TTTAAA 1 cut(s) 1234
DraIII CACNNNGTG 1 cut(s) 1171
DriI GACNNNNNGTC 1 cut(s) 940
EaeI YGGCCR 3 cut(s) 1089, 1149, 1269
Eam1104I CTCTTC 3 cut(s) 464, 534, 1224
Eam1105I GACNNNNNGTC 1 cut(s) 940
EarI CTCTTC 3 cut(s) 464, 534, 1224
Eco130I CCWWGG 4 cut(s) 648, 996, 1054, 1128
Eco31I GGTCTC 1 cut(s) 405
Eco47I GGWCC 2 cut(s) 162, 1132
Eco57I CTGAAG 1 cut(s) 445
EcoO109I RGGNCCY 1 cut(s) 1132
EcoRII CCWGG 1 cut(s) 1135
EcoT14I CCWWGG 4 cut(s) 648, 996, 1054, 1128
EcoT22I ATGCAT 1 cut(s) 1291
ErhI CCWWGG 4 cut(s) 648, 996, 1054, 1128
FaeI CATG 4 cut(s) 263, 543, 1000, 1246
FaqI GGGAC 2 cut(s) 581, 1036
FatI CATG 4 cut(s) 259, 539, 996, 1242
FauI CCCGC 1 cut(s) 483
FauNDI CATATG 1 cut(s) 856
FbaI TGATCA 1 cut(s) 262
FblI GTMKAC 1 cut(s) 944
Fnu4HI GCNGC 1 cut(s) 957
FokI GGATG 4 cut(s) 115, 253, 404, 737
Fsp4HI GCNGC 1 cut(s) 957
FspBI CTAG 2 cut(s) 185, 1023
GlaI GCGC 3 cut(s) 229, 480, 834
GluI GCNGC 1 cut(s) 957
GsaI CCCAGC 1 cut(s) 519
HaeIII GGCC 7 cut(s) 109, 432, 494, 799, 1091, 1151, 1271
HgaI GACGC 1 cut(s) 59
HhaI GCGC 3 cut(s) 230, 481, 835
Hin1I GRCGYC 1 cut(s) 51
Hin1II CATG 4 cut(s) 263, 543, 1000, 1246
Hin6I GCGC 3 cut(s) 228, 479, 833
HinP1I GCGC 3 cut(s) 228, 479, 833
HindIII AAGCTT 1 cut(s) 713
HinfI GANTC 3 cut(s) 665, 896, 941
HphI GGTGA 2 cut(s) 674, 754
Hpy166II GTNNAC 3 cut(s) 162, 815, 945
Hpy188I TCNGA 3 cut(s) 267, 279, 1019
Hpy188III TCNNGA 5 cut(s) 13, 22, 121, 260, 1223
Hpy8I GTNNAC 3 cut(s) 162, 815, 945
Hpy99I CGWCG 3 cut(s) 62, 140, 617
HpyAV CCTTC 7 cut(s) 19, 105, 175, 364, 505, 597, 733
HpyCH4III ACNGT 3 cut(s) 140, 285, 473
HpyCH4IV ACGT 4 cut(s) 60, 178, 370, 1170
HpyCH4V TGCA 8 cut(s) 325, 452, 687, 720, 902, 959, 1007, 1289
HpyF10VI GCNNNNNNNGC 6 cut(s) 350, 449, 487, 965, 1184, 1268
HpyF3I CTNAG 2 cut(s) 276, 296
HpySE526I ACGT 4 cut(s) 60, 178, 370, 1170
Hsp92I GRCGYC 1 cut(s) 51
Hsp92II CATG 4 cut(s) 263, 543, 1000, 1246
HspAI GCGC 3 cut(s) 228, 479, 833
Ksp22I TGATCA 1 cut(s) 262
KspI CCGCGG 1 cut(s) 158
Kzo9I GATC 4 cut(s) 262, 301, 747, 759
LguI GCTCTTC 1 cut(s) 464
LmnI GCTCC 2 cut(s) 277, 350
Lsp1109I GCAGC 1 cut(s) 943
LweI GCATC 4 cut(s) 461, 820, 994, 1276
MaeI CTAG 2 cut(s) 185, 1023
MaeII ACGT 4 cut(s) 60, 178, 370, 1170
MalI GATC 4 cut(s) 264, 303, 749, 761
MbiI CCGCTC 1 cut(s) 443
MboI GATC 4 cut(s) 262, 301, 747, 759
MboII GAAGA 8 cut(s) 59, 401, 451, 521, 647, 757, 944, 1211
MflI RGATCY 1 cut(s) 759
MhlI GDGCHC 2 cut(s) 32, 515
MlsI TGGCCA 2 cut(s) 1091, 1151
MluCI AATT 3 cut(s) 638, 1064, 1141
MluNI TGGCCA 2 cut(s) 1091, 1151
MlyI GAGTC 1 cut(s) 950
MmeI TCCRAC 2 cut(s) 193, 1042
Mox20I TGGCCA 2 cut(s) 1091, 1151
Mph1103I ATGCAT 1 cut(s) 1291
MroXI GAANNNNTTC 1 cut(s) 621
MscI TGGCCA 2 cut(s) 1091, 1151
MseI TTAA 3 cut(s) 398, 1013, 1233
Msp20I TGGCCA 2 cut(s) 1091, 1151
MspA1I CMGCKG 1 cut(s) 157
MspCI CTTAAG 1 cut(s) 397
MspR9I CCNGG 1 cut(s) 1137
Mva1269I GAATGC 1 cut(s) 274
MvaI CCWGG 1 cut(s) 1137
MvnI CGCG 1 cut(s) 157
MwoI GCNNNNNNNGC 6 cut(s) 350, 449, 487, 965, 1184, 1268
NcoI CCATGG 1 cut(s) 996
NdeI CATATG 1 cut(s) 856
NdeII GATC 4 cut(s) 262, 301, 747, 759
NheI GCTAGC 1 cut(s) 184
NlaIII CATG 4 cut(s) 263, 543, 1000, 1246
NlaIV GGNNCC 6 cut(s) 76, 352, 512, 761, 1134, 1201
NsiI ATGCAT 1 cut(s) 1291
PagI TCATGA 1 cut(s) 259
PaqCI CACCTGC 1 cut(s) 811
PasI CCCWGGG 1 cut(s) 1136
PciSI GCTCTTC 1 cut(s) 464
PcsI WCGNNNNNNNCGW 1 cut(s) 57
PctI GAATGC 1 cut(s) 274
PdmI GAANNNNTTC 1 cut(s) 621
PfeI GAWTC 2 cut(s) 665, 896
PkrI GCNGC 1 cut(s) 958
Ple19I CGATCG 1 cut(s) 304
PleI GAGTC 1 cut(s) 949
PpsI GAGTC 1 cut(s) 949
Ppu21I YACGTR 1 cut(s) 1171
PpuMI RGGWCCY 1 cut(s) 1132
Psp1406I AACGTT 1 cut(s) 370
Psp5II RGGWCCY 1 cut(s) 1132
Psp6I CCWGG 1 cut(s) 1135
PspFI CCCAGC 1 cut(s) 515
PspGI CCWGG 1 cut(s) 1135
PspN4I GGNNCC 6 cut(s) 76, 352, 512, 761, 1134, 1201
PspPI GGNCC 4 cut(s) 107, 162, 492, 1132
PspPPI RGGWCCY 1 cut(s) 1132
PsuI RGATCY 1 cut(s) 759
PvuI CGATCG 1 cut(s) 304
RsaI GTAC 5 cut(s) 291, 767, 773, 816, 1193
RsaNI GTAC 5 cut(s) 290, 766, 772, 815, 1192
SacII CCGCGG 1 cut(s) 158
SapI GCTCTTC 1 cut(s) 464
SaqAI TTAA 3 cut(s) 398, 1013, 1233
SatI GCNGC 1 cut(s) 957
Sau3AI GATC 4 cut(s) 262, 301, 747, 759
Sau96I GGNCC 4 cut(s) 107, 162, 492, 1132
ScaI AGTACT 2 cut(s) 767, 1193
SchI GAGTC 1 cut(s) 950
ScrFI CCNGG 1 cut(s) 1137
SduI GDGCHC 2 cut(s) 32, 515
SfaNI GCATC 4 cut(s) 461, 820, 994, 1276
Sfr303I CCGCGG 1 cut(s) 158
SgrBI CCGCGG 1 cut(s) 158
SinI GGWCC 2 cut(s) 162, 1132
SmlI CTYRAG 1 cut(s) 397
SmoI CTYRAG 1 cut(s) 397
Sse9I AATT 3 cut(s) 638, 1064, 1141
SsiI CCGC 4 cut(s) 155, 157, 443, 490
SspMI CTAG 2 cut(s) 185, 1023
StyD4I CCNGG 1 cut(s) 1135
StyI CCWWGG 4 cut(s) 648, 996, 1054, 1128
TaaI ACNGT 3 cut(s) 140, 285, 473
TaiI ACGT 4 cut(s) 63, 181, 373, 1173
TaqI TCGA 2 cut(s) 120, 633
TaqII GACCGA 1 cut(s) 658
TasI AATT 3 cut(s) 638, 1064, 1141
TatI WGTACW 2 cut(s) 765, 1191
TfiI GAWTC 2 cut(s) 665, 896
Tru1I TTAA 3 cut(s) 398, 1013, 1233
Tru9I TTAA 3 cut(s) 398, 1013, 1233
TscAI CASTG 2 cut(s) 105, 604
TseI GCWGC 1 cut(s) 956
TspDTI ATGAA 1 cut(s) 1238
TspGWI ACGGA 3 cut(s) 363, 380, 832
TspRI CASTG 2 cut(s) 105, 604
Vha464I CTTAAG 1 cut(s) 397
VpaK11BI GGWCC 2 cut(s) 162, 1132
XapI RAATTY 1 cut(s) 638
XmiI GTMKAC 1 cut(s) 944
XmnI GAANNNNTTC 1 cut(s) 621
XspI CTAG 2 cut(s) 185, 1023
ZrmI AGTACT 2 cut(s) 767, 1193
Zsp2I ATGCAT 1 cut(s) 1291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.