pycom10g02180

spliceosomal complex assembly

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0000179
Physical Location & Seq
Forward (+)
2382430 .. 2384046
1617 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g02180.2

Sequence Viewer

Length: 1476 bp
ATGGCTGCAGGTGAATCTTTCAGTCTTGCTATCCCGGTTTTGGCCAATATTTATAACGGCTTGAGTGTTGTTTCGAACTCGGCAAACACTGAAGATCGTGCTGCGGTTCTTCCCTACCACTATGTGTATGGTTGGTTGGGTGAGTACTTCGGTACTCATTTTTTTTCTTCAACTCCAAACAAGTCAGGGCCTTTGATGACGAAGTATTCTGGCGTGCTTTCTTCGAAGAGCCTCGATGATTCCCAGGCGCAAGCACTATTTAGAAGCTGCGAAGGCTTGAAGATGGACTATCTGGCGAGAGTTGGCTCGGTGCGGCGAGGCATCATGGACGATTCGCATCTTCGCTTCTCAGACTTATCTTACCTTATAAGTCTTCGCTCAGGGTATGTTTCTTTGCGGCAAGAAGATCGATGCATTGTTCAGCCGTATAGTCCCCACCGTTTCAGCAGGCAATTTGGTTTTGTCCAACATGTGCCAGGCAAGCTGAAGGAAAAAAACCAATTAGACTCCTTGCAAGCCGTGTATATGCATTGGGAGTCTTGTACCCGTGCATGTACAAATGCTTCTGTCACCCTGCCGGCCAAAGACGAGTTCAAGAGTAGTCCAGTAACCCGTGCTTACGTAAGTTGGTGGTCAAAGGTATATTATGAGAATTTGGGGATGGCAAGTGGTACCAATTCTTCTCATTCACACCTTAATGTATTGAAGGAGGGGTGTTCTGTGGTTCCTACACAACTGATATCTTTTGATTGCGCGAGTGCTGCTACTTTGCAAGATAGACCAGTGGTTTTAGTCCCTCAATGCCCACGCTTGTCTTCTCAACATCTGGATGTATCTGAAGAGGCTGGTGATGAAGTTGATTCGCACGAAGATGGACTTGTTTTGCGGCAGGGTCAACAAGTTTTAAATAAGCGACGTCTTGAAGGCGCTCAGGCCGATAGCGATGTCAATTTTCGTCATAAGAAGAAAGAAGTGTTTAGGCTCCCTCAACTTGATGGCAGTATTTATTCTTATACGGAGATGCTATTTGGAGGCGACCTACCTACAGGCGAGGAGATTGGGGATCCACCTGGTACAGAGCTTATCCCAAGTTCGTCAAGTTTCGCAAGTTTGCCGTGTGTAGGTGGAGGTATGCAAGATCCCGTCATGCGTTTTATACCTTTGCCAGCTAGCTCTGAGATCTCTCTGAGAGGGCCAAACCTTAGTGGTACTGAGCAGCTTATTCATCGCATCAATCTTCATGCGGCAATGGATATCAAGAGCCATATTGAGGGGAGGATTTCAAAATGCCCATCGGAGGACCTTGCGTTGCTTAAGGAGGACTTGTCGAAACTTATTTCTGCAATTGACAATCTTAACATTGATTCTTCATCCTTGAAGATCAAGATTGCCGAACTTATGGCCGCCTCAACTGAGTATTCTTCCTTGCGTGTTATTTCCTCGAAGAAGTTGAGTCCAGATGTTAGAGCTCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_2 gag_pre-integrs rve zf-CCHC

Protein Analysis

492

Amino Acids

54.04

Weight (kDa)

6.22

Isoelectric Point (pI)

54.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 54, 368
AatII GACGTC 1 cut(s) 919
Acc65I GGTACC 1 cut(s) 671
AccB1I GGYRCC 1 cut(s) 671
AccII CGCG 1 cut(s) 755
AciI CCGC 6 cut(s) 104, 313, 397, 886, 1244, 1404
AclWI GGATC 3 cut(s) 1058, 1071, 1133
AcoI YGGCCR 3 cut(s) 42, 579, 1401
AcsI RAATTY 1 cut(s) 652
AcuI CTGAAG 3 cut(s) 111, 506, 858
AcyI GRCGYC 1 cut(s) 916
AdeI CACNNNGTG 1 cut(s) 124
AfaI GTAC 7 cut(s) 146, 154, 544, 556, 673, 1075, 1210
AfiI CCNNNNNNNGG 4 cut(s) 40, 1121, 1270, 1297
AflII CTTAAG 1 cut(s) 1313
AflIII ACRYGT 1 cut(s) 469
AgsI TTSAA 7 cut(s) 171, 280, 595, 706, 923, 1284, 1378
AjnI CCWGG 3 cut(s) 243, 475, 1069
AjuI GAANNNNNNNTTGG 2 cut(s) 575, 607
AluBI AGCT 7 cut(s) 267, 484, 1081, 1169, 1173, 1219, 1469
AluI AGCT 7 cut(s) 267, 484, 1081, 1169, 1173, 1219, 1469
Alw21I GWGCWC 1 cut(s) 1471
AlwI GGATC 3 cut(s) 1058, 1071, 1133
AoxI GGCC 6 cut(s) 42, 188, 579, 933, 1193, 1401
ApeKI GCWGC 5 cut(s) 5, 101, 267, 761, 1216
ApoI RAATTY 1 cut(s) 652
Asp718I GGTACC 1 cut(s) 671
AspLEI GCGC 3 cut(s) 250, 755, 929
AspS9I GGNCC 3 cut(s) 188, 1193, 1300
AsuC2I CCSGG 1 cut(s) 35
AsuHPI GGTGA 4 cut(s) 23, 152, 562, 860
AsuII TTCGAA 2 cut(s) 74, 224
AsuNHI GCTAGC 1 cut(s) 1169
AvaII GGWCC 1 cut(s) 1300
BalI TGGCCA 1 cut(s) 44
BamHI GGATCC 1 cut(s) 1063
BanI GGYRCC 1 cut(s) 671
BanII GRGCYC 1 cut(s) 1471
BarI GAAGNNNNNNTAC 4 cut(s) 547, 579, 664, 696
BbsI GAAGAC 2 cut(s) 365, 807
Bbv12I GWGCWC 1 cut(s) 1471
BbvI GCAGC 4 cut(s) 88, 254, 748, 1228
BccI CCATC 5 cut(s) 277, 655, 866, 989, 1300
BceAI ACGGC 4 cut(s) 73, 409, 503, 1099
BcgI CGANNNNNNTGC 2 cut(s) 389, 423
BciT130I CCWGG 3 cut(s) 245, 477, 1071
BcnI CCSGG 1 cut(s) 35
BfaI CTAG 1 cut(s) 1170
BfmI CTRYAG 2 cut(s) 6, 1044
BfoI RGCGCY 1 cut(s) 930
BfrI CTTAAG 1 cut(s) 1313
BglII AGATCT 1 cut(s) 1179
BmcAI AGTACT 1 cut(s) 146
Bme1390I CCNGG 4 cut(s) 35, 245, 477, 1071
Bme18I GGWCC 1 cut(s) 1300
BmgT120I GGNCC 3 cut(s) 188, 1193, 1300
BmiI GGNNCC 4 cut(s) 673, 726, 983, 1065
BmrFI CCNGG 4 cut(s) 35, 245, 477, 1071
BmsI GCATC 5 cut(s) 330, 346, 401, 1011, 1239
BmtI GCTAGC 1 cut(s) 1173
BpiI GAAGAC 2 cut(s) 365, 807
Bpu10I CCTNAGC 2 cut(s) 379, 930
Bpu14I TTCGAA 2 cut(s) 74, 224
BpuEI CTTGAG 1 cut(s) 82
BpuMI CCSGG 1 cut(s) 35
Bsa29I ATCGAT 1 cut(s) 409
BsaAI YACGTR 1 cut(s) 622
BsaBI GATNNNNATC 1 cut(s) 336
BsaHI GRCGYC 1 cut(s) 916
BsaJI CCNNGG 1 cut(s) 243
BsaXI ACNNNNNCTCC 2 cut(s) 1310, 1340
Bsc4I CCNNNNNNNGG 4 cut(s) 40, 1121, 1270, 1297
Bse118I RCCGGY 1 cut(s) 577
Bse1I ACTGG 2 cut(s) 605, 782
Bse3DI GCAATG 1 cut(s) 1254
Bse8I GATNNNNATC 1 cut(s) 336
BseBI CCWGG 3 cut(s) 245, 477, 1071
BseCI ATCGAT 1 cut(s) 409
BseDI CCNNGG 1 cut(s) 243
BseGI GGATG 3 cut(s) 666, 835, 1370
BseJI GATNNNNATC 1 cut(s) 336
BseLI CCNNNNNNNGG 4 cut(s) 40, 1121, 1270, 1297
BseMI GCAATG 1 cut(s) 1254
BseMII CTCAG 7 cut(s) 363, 393, 944, 1167, 1178, 1203, 1404
BseNI ACTGG 2 cut(s) 605, 782
BseRI GAGGAG 1 cut(s) 1067
BseXI GCAGC 4 cut(s) 88, 254, 748, 1228
Bsh1236I CGCG 1 cut(s) 755
BshFI GGCC 6 cut(s) 44, 190, 581, 935, 1195, 1403
BshNI GGYRCC 1 cut(s) 671
BshVI ATCGAT 1 cut(s) 409
BsiHKAI GWGCWC 1 cut(s) 1471
BsiSI CCGG 2 cut(s) 35, 578
BslFI GGGAC 2 cut(s) 417, 779
BslI CCNNNNNNNGG 4 cut(s) 40, 1121, 1270, 1297
BsmFI GGGAC 2 cut(s) 417, 779
BsnI GGCC 6 cut(s) 44, 190, 581, 935, 1195, 1403
Bsp119I TTCGAA 2 cut(s) 74, 224
Bsp1286I GDGCHC 1 cut(s) 1471
Bsp1407I TGTACA 1 cut(s) 554
Bsp143I GATC 6 cut(s) 94, 406, 1063, 1138, 1179, 1380
BspACI CCGC 6 cut(s) 104, 313, 397, 886, 1244, 1404
BspANI GGCC 6 cut(s) 44, 190, 581, 935, 1195, 1403
BspCNI CTCAG 7 cut(s) 362, 392, 943, 1168, 1179, 1204, 1405
BspDI ATCGAT 1 cut(s) 409
BspFNI CGCG 1 cut(s) 755
BspLI GGNNCC 4 cut(s) 673, 726, 983, 1065
BspMAI CTGCAG 1 cut(s) 10
BspOI GCTAGC 1 cut(s) 1173
BspPI GGATC 3 cut(s) 1058, 1071, 1133
BspQI GCTCTTC 1 cut(s) 221
BspT104I TTCGAA 2 cut(s) 74, 224
BspT107I GGYRCC 1 cut(s) 671
BspTI CTTAAG 1 cut(s) 1313
BsrDI GCAATG 1 cut(s) 1254
BsrFI RCCGGY 1 cut(s) 577
BsrGI TGTACA 1 cut(s) 554
BsrI ACTGG 2 cut(s) 605, 782
BssAI RCCGGY 1 cut(s) 577
BssECI CCNNGG 1 cut(s) 243
BssMI GATC 6 cut(s) 94, 406, 1063, 1138, 1179, 1380
BssNI GRCGYC 1 cut(s) 916
Bst2UI CCWGG 3 cut(s) 245, 477, 1071
Bst4CI ACNGT 1 cut(s) 440
Bst6I CTCTTC 2 cut(s) 221, 834
BstACI GRCGYC 1 cut(s) 916
BstAFI CTTAAG 1 cut(s) 1313
BstAUI TGTACA 1 cut(s) 554
BstBAI YACGTR 1 cut(s) 622
BstBI TTCGAA 2 cut(s) 74, 224
BstC8I GCNNGC 8 cut(s) 215, 252, 449, 482, 516, 579, 1167, 1171
BstDEI CTNAG 8 cut(s) 349, 379, 930, 1176, 1187, 1202, 1212, 1413
BstF5I GGATG 3 cut(s) 666, 835, 1370
BstFNI CGCG 1 cut(s) 755
BstH2I RGCGCY 1 cut(s) 930
BstHHI GCGC 3 cut(s) 250, 755, 929
BstKTI GATC 6 cut(s) 97, 409, 1066, 1141, 1182, 1383
BstMBI GATC 6 cut(s) 94, 406, 1063, 1138, 1179, 1380
BstMWI GCNNNNNNNGC 3 cut(s) 273, 481, 761
BstNI CCWGG 3 cut(s) 245, 477, 1071
BstNSI RCATGY 2 cut(s) 473, 555
BstSCI CCNGG 4 cut(s) 33, 243, 475, 1069
BstSFI CTRYAG 2 cut(s) 6, 1044
BstSNI TACGTA 1 cut(s) 622
BstUI CGCG 1 cut(s) 755
BstV1I GCAGC 4 cut(s) 88, 254, 748, 1228
BstV2I GAAGAC 2 cut(s) 365, 807
BstX2I RGATCY 3 cut(s) 1063, 1138, 1179
BstYI RGATCY 3 cut(s) 1063, 1138, 1179
Bsu15I ATCGAT 1 cut(s) 409
BsuRI GGCC 6 cut(s) 44, 190, 581, 935, 1195, 1403
BsuTUI ATCGAT 1 cut(s) 409
BtgZI GCGATG 2 cut(s) 957, 1211
BtsCI GGATG 3 cut(s) 666, 835, 1370
BtsIMutI CAGTG 2 cut(s) 87, 789
Cac8I GCNNGC 8 cut(s) 215, 252, 449, 482, 516, 579, 1167, 1171
CfoI GCGC 3 cut(s) 250, 755, 929
Cfr10I RCCGGY 1 cut(s) 577
Cfr13I GGNCC 3 cut(s) 188, 1193, 1300
ClaI ATCGAT 1 cut(s) 409
CsiI ACCWGGT 1 cut(s) 1069
Csp6I GTAC 7 cut(s) 145, 153, 543, 555, 672, 1074, 1209
CviAII CATG 5 cut(s) 325, 470, 552, 1147, 1241
CviQI GTAC 7 cut(s) 145, 153, 543, 555, 672, 1074, 1209
DdeI CTNAG 8 cut(s) 349, 379, 930, 1176, 1187, 1202, 1212, 1413
DpnI GATC 6 cut(s) 96, 408, 1065, 1140, 1181, 1382
DpnII GATC 6 cut(s) 94, 406, 1063, 1138, 1179, 1380
DraI TTTAAA 1 cut(s) 906
DraIII CACNNNGTG 1 cut(s) 124
EaeI YGGCCR 3 cut(s) 42, 579, 1401
Eam1104I CTCTTC 2 cut(s) 221, 834
EarI CTCTTC 2 cut(s) 221, 834
Ecl136II GAGCTC 1 cut(s) 1469
Eco105I TACGTA 1 cut(s) 622
Eco24I GRGCYC 1 cut(s) 1471
Eco32I GATATC 2 cut(s) 741, 1255
Eco47I GGWCC 1 cut(s) 1300
Eco53kI GAGCTC 1 cut(s) 1469
Eco57I CTGAAG 3 cut(s) 111, 506, 858
EcoICRI GAGCTC 1 cut(s) 1469
EcoO109I RGGNCCY 2 cut(s) 188, 1300
EcoRII CCWGG 3 cut(s) 243, 475, 1069
EcoRV GATATC 2 cut(s) 741, 1255
EcoT22I ATGCAT 2 cut(s) 416, 531
EcoT38I GRGCYC 1 cut(s) 1471
FaeI CATG 5 cut(s) 328, 473, 555, 1150, 1244
FalI AAGNNNNNCTT 4 cut(s) 861, 893, 1307, 1339
FaqI GGGAC 2 cut(s) 417, 779
FatI CATG 5 cut(s) 324, 469, 551, 1146, 1240
FokI GGATG 3 cut(s) 673, 842, 1357
FriOI GRGCYC 1 cut(s) 1471
FspBI CTAG 1 cut(s) 1170
GlaI GCGC 3 cut(s) 249, 754, 928
HaeII RGCGCY 1 cut(s) 930
HaeIII GGCC 6 cut(s) 44, 190, 581, 935, 1195, 1403
HapII CCGG 2 cut(s) 35, 578
HhaI GCGC 3 cut(s) 250, 755, 929
Hin1I GRCGYC 1 cut(s) 916
Hin1II CATG 5 cut(s) 328, 473, 555, 1150, 1244
Hin6I GCGC 3 cut(s) 248, 753, 927
HinP1I GCGC 3 cut(s) 248, 753, 927
HincII GTYRAC 1 cut(s) 896
HindII GTYRAC 1 cut(s) 896
HinfI GANTC 8 cut(s) 14, 239, 332, 506, 536, 860, 1364, 1453
HpaII CCGG 2 cut(s) 35, 578
HphI GGTGA 4 cut(s) 23, 152, 562, 860
Hpy166II GTNNAC 1 cut(s) 896
Hpy188I TCNGA 5 cut(s) 352, 838, 1177, 1188, 1297
Hpy188III TCNNGA 6 cut(s) 595, 827, 920, 1258, 1384, 1457
Hpy8I GTNNAC 1 cut(s) 896
Hpy99I CGWCG 1 cut(s) 918
HpyAV CCTTC 4 cut(s) 266, 481, 700, 917
HpyCH4III ACNGT 1 cut(s) 440
HpyCH4IV ACGT 2 cut(s) 621, 916
HpyCH4V TGCA 8 cut(s) 8, 414, 514, 529, 551, 772, 1135, 1343
HpyF10VI GCNNNNNNNGC 3 cut(s) 273, 481, 761
HpyF3I CTNAG 8 cut(s) 349, 379, 930, 1176, 1187, 1202, 1212, 1413
HpySE526I ACGT 2 cut(s) 621, 916
Hsp92I GRCGYC 1 cut(s) 916
Hsp92II CATG 5 cut(s) 328, 473, 555, 1150, 1244
HspAI GCGC 3 cut(s) 248, 753, 927
KpnI GGTACC 1 cut(s) 675
KroI GCCGGC 1 cut(s) 577
KroNI GCCGGC 1 cut(s) 579
Kzo9I GATC 6 cut(s) 94, 406, 1063, 1138, 1179, 1380
LguI GCTCTTC 1 cut(s) 221
LmnI GCTCC 1 cut(s) 987
Lsp1109I GCAGC 4 cut(s) 88, 254, 748, 1228
LweI GCATC 5 cut(s) 330, 346, 401, 1011, 1239
MabI ACCWGGT 1 cut(s) 1069
MaeI CTAG 1 cut(s) 1170
MaeII ACGT 2 cut(s) 621, 916
MaeIII GTNAC 2 cut(s) 568, 607
MalI GATC 6 cut(s) 96, 408, 1065, 1140, 1181, 1382
MboI GATC 6 cut(s) 94, 406, 1063, 1138, 1179, 1380
MfeI CAATTG 1 cut(s) 1344
MflI RGATCY 3 cut(s) 1063, 1138, 1179
MhlI GDGCHC 1 cut(s) 1471
MlsI TGGCCA 1 cut(s) 44
MluCI AATT 6 cut(s) 452, 500, 652, 676, 949, 1344
MluNI TGGCCA 1 cut(s) 44
MlyI GAGTC 3 cut(s) 500, 545, 1462
MmeI TCCRAC 1 cut(s) 490
Mox20I TGGCCA 1 cut(s) 44
Mph1103I ATGCAT 2 cut(s) 416, 531
MroNI GCCGGC 1 cut(s) 577
MscI TGGCCA 1 cut(s) 44
MseI TTAA 4 cut(s) 696, 905, 1314, 1356
MslI CAYNNNNRTG 3 cut(s) 696, 828, 870
Msp20I TGGCCA 1 cut(s) 44
MspCI CTTAAG 1 cut(s) 1313
MspI CCGG 2 cut(s) 35, 578
MspR9I CCNGG 4 cut(s) 35, 245, 477, 1071
MunI CAATTG 1 cut(s) 1344
MvaI CCWGG 3 cut(s) 245, 477, 1071
MvnI CGCG 1 cut(s) 755
MwoI GCNNNNNNNGC 3 cut(s) 273, 481, 761
NaeI GCCGGC 1 cut(s) 579
NciI CCSGG 1 cut(s) 35
NdeII GATC 6 cut(s) 94, 406, 1063, 1138, 1179, 1380
NgoMIV GCCGGC 1 cut(s) 577
NheI GCTAGC 1 cut(s) 1169
NlaIII CATG 5 cut(s) 328, 473, 555, 1150, 1244
NlaIV GGNNCC 4 cut(s) 673, 726, 983, 1065
NmeAIII GCCGAG 1 cut(s) 59
NmuCI GTSAC 1 cut(s) 568
NsiI ATGCAT 2 cut(s) 416, 531
NspI RCATGY 2 cut(s) 473, 555
NspV TTCGAA 2 cut(s) 74, 224
PciI ACATGT 1 cut(s) 469
PciSI GCTCTTC 1 cut(s) 221
PdiI GCCGGC 1 cut(s) 579
PfeI GAWTC 5 cut(s) 14, 239, 332, 860, 1364
PleI GAGTC 3 cut(s) 500, 544, 1461
PpsI GAGTC 3 cut(s) 500, 544, 1461
Ppu21I YACGTR 1 cut(s) 622
PpuMI RGGWCCY 1 cut(s) 1300
PscI ACATGT 1 cut(s) 469
PsiI TTATAA 2 cut(s) 54, 368
Psp124BI GAGCTC 1 cut(s) 1471
Psp5II RGGWCCY 1 cut(s) 1300
Psp6I CCWGG 3 cut(s) 243, 475, 1069
PspGI CCWGG 3 cut(s) 243, 475, 1069
PspN4I GGNNCC 4 cut(s) 673, 726, 983, 1065
PspPI GGNCC 3 cut(s) 188, 1193, 1300
PspPPI RGGWCCY 1 cut(s) 1300
PstI CTGCAG 1 cut(s) 10
PsuI RGATCY 3 cut(s) 1063, 1138, 1179
RsaI GTAC 7 cut(s) 146, 154, 544, 556, 673, 1075, 1210
RsaNI GTAC 7 cut(s) 145, 153, 543, 555, 672, 1074, 1209
RseI CAYNNNNRTG 3 cut(s) 696, 828, 870
SacI GAGCTC 1 cut(s) 1471
SapI GCTCTTC 1 cut(s) 221
SaqAI TTAA 4 cut(s) 696, 905, 1314, 1356
Sau3AI GATC 6 cut(s) 94, 406, 1063, 1138, 1179, 1380
Sau96I GGNCC 3 cut(s) 188, 1193, 1300
ScaI AGTACT 1 cut(s) 146
SchI GAGTC 3 cut(s) 500, 545, 1462
ScrFI CCNGG 4 cut(s) 35, 245, 477, 1071
SduI GDGCHC 1 cut(s) 1471
SexAI ACCWGGT 1 cut(s) 1069
SfaNI GCATC 5 cut(s) 330, 346, 401, 1011, 1239
SfcI CTRYAG 2 cut(s) 6, 1044
SfuI TTCGAA 2 cut(s) 74, 224
SinI GGWCC 1 cut(s) 1300
SmiMI CAYNNNNRTG 3 cut(s) 696, 828, 870
SmlI CTYRAG 2 cut(s) 61, 1313
SmoI CTYRAG 2 cut(s) 61, 1313
SnaBI TACGTA 1 cut(s) 622
Sse9I AATT 6 cut(s) 452, 500, 652, 676, 949, 1344
SsiI CCGC 6 cut(s) 104, 313, 397, 886, 1244, 1404
SspI AATATT 1 cut(s) 49
SspMI CTAG 1 cut(s) 1170
SstI GAGCTC 1 cut(s) 1471
StyD4I CCNGG 4 cut(s) 33, 243, 475, 1069
TaaI ACNGT 1 cut(s) 440
TaiI ACGT 2 cut(s) 624, 919
TaqI TCGA 6 cut(s) 74, 224, 234, 409, 1328, 1442
TasI AATT 6 cut(s) 452, 500, 652, 676, 949, 1344
TatI WGTACW 2 cut(s) 144, 554
TauI GCSGC 5 cut(s) 316, 400, 889, 1247, 1406
TfiI GAWTC 5 cut(s) 14, 239, 332, 860, 1364
Tru1I TTAA 4 cut(s) 696, 905, 1314, 1356
Tru9I TTAA 4 cut(s) 696, 905, 1314, 1356
TscAI CASTG 2 cut(s) 94, 789
TseFI GTSAC 1 cut(s) 568
TseI GCWGC 5 cut(s) 5, 101, 267, 761, 1216
Tsp45I GTSAC 1 cut(s) 568
TspDTI ATGAA 4 cut(s) 867, 1214, 1229, 1359
TspGWI ACGGA 1 cut(s) 1031
TspRI CASTG 2 cut(s) 94, 789
Vha464I CTTAAG 1 cut(s) 1313
VpaK11BI GGWCC 1 cut(s) 1300
XapI RAATTY 1 cut(s) 652
XceI RCATGY 2 cut(s) 473, 555
XcmI CCANNNNNNNNNTGG 1 cut(s) 125
XspI CTAG 1 cut(s) 1170
ZraI GACGTC 1 cut(s) 917
ZrmI AGTACT 1 cut(s) 146
Zsp2I ATGCAT 2 cut(s) 416, 531
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.