Rmu_sc0012849.1_g000001

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012849.1
OG0000179
Physical Location & Seq
Forward (+)
2954 .. 5023
2070 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012849.1_g000001.1.cds

Sequence Viewer

Length: 1806 bp
atggctttcttcaagtgcttcaagaaagggacagtcatcatcctcgaggattcggggacactcaaggtgatggcactactttctcacatcctcgagtggactcatgtgacacctcgccaactagctatgtttcgacaacagaggtctggcaaagacaaacaaagctcaaatgtgttgtcattgaagtcttcgcatcatgatcagaacaatcctcaagtcccattcacgcttctcaatgatagtatatgcaacggtttagtgctgtggagcagtgcatttctagcaaacagagggttctcttacacagagttctactgggaatgggtagacgatatcttaagcaggaatggaaagcttattcgggaggctggtctctatcgagcgatattcgcctcactattcagctatgacctcgttgcgcctgtcatacgggctttctgtgagtattggtgtcctaggacgaataccctccacacttgtagcagggaaatgtccatctccctctgggatttggaccaaattggaggtttgcccattgccggactattttatgatgaggttgttccagctgttgaagagctttctgcaacaagcaaaaggagtcaacagagccgctatttaggagctttgcgctataaaaggcctccgaacaaaagcagcaggaacaaaagagacccacccccgaatgtgtttaacccatctgacaagatccatgagatccgacaacgaactcctgcaggccttgcagtatttgatgacttaggcatggagggtgaagatatagagcccacttatttggctgcctttgttgattgttggttgtgcctgtttgttttacccagagacaacaccgctttgattcgtcagggagtattcaaagtcaccagcaaaatgtcacagggtctaatattttgcctagcagtatcgatgttggctagcatttatcagggtttgaacgagatctctgtttccagtgatccaagtaattgttcagctgctcttccttttcattttacatacgtatggctagcagagtacttcgacacccactttcaatctccatttcccaacgacctaaggccccgtatggttcgcttctccggagaattttcagctaagtattttgaggactcacaggctctttctttgttcaatgcatgtgacaatgtgaggatggatgcatttgccaggccatacagtccacatcagtttagtcgacagtttggttatgtccaagacattcccggcagccttaagaatgacattcgcaccggcgtattggctctgacttatttgcattgggattcttgcacccgaatgaacaccaagtgcatggtaacgttgccgatccaaagtgctatcatggagtacatggttacccgagactatgtcgattggtggtctaaagtgtaccgttctacaccagtgaagacaacaaaagtagcgcctactaatggaccactgcacaagtctctgaaagcaaaagaagataagaacgttacccgtacaccactgcctcatcggaaaaatgtgattccttgtgaagttgaatatagcaccaacgtccctgggcctcctaataggactttgtttcctagtagtgattgtcatactcatccactcaacactctagaagatgatggggactctttagattctcacatcgcttccgtccatccgcttaagctaaaaaaacctgccatcaaagaaaaaagacgtagcggaagcagcggtagcaataatagtgaagtgcactttaagcgtcggaaaactgacaccagtcattcaacgctgagtttactttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

601

Amino Acids

68.24

Weight (kDa)

8.83

Isoelectric Point (pI)

48.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 44
Acc36I ACCTGC 1 cut(s) 1705
AccI GTMKAC 2 cut(s) 327, 1216
AccIII TCCGGA 1 cut(s) 1100
AciI CCGC 5 cut(s) 613, 852, 1679, 1722, 1731
AclI AACGTT 2 cut(s) 1340, 1497
AclWI GGATC 4 cut(s) 703, 712, 971, 1342
AcsI RAATTY 1 cut(s) 1106
AdeI CACNNNGTG 1 cut(s) 1329
AfaI GTAC 4 cut(s) 1037, 1370, 1412, 1507
AfiI CCNNNNNNNGG 2 cut(s) 539, 1454
AflII CTTAAG 3 cut(s) 337, 1253, 1682
AjnI CCWGG 2 cut(s) 1187, 1567
AjuI GAANNNNNNNTTGG 2 cut(s) 973, 1005
Alw21I GWGCWC 1 cut(s) 1755
Alw26I GTCTC 5 cut(s) 377, 666, 837, 1377, 1476
Alw44I GTGCAC 1 cut(s) 1751
AlwI GGATC 4 cut(s) 703, 712, 971, 1342
Ama87I CYCGRG 3 cut(s) 44, 92, 1380
Aor13HI TCCGGA 1 cut(s) 1100
AoxI GGCC 5 cut(s) 641, 739, 1079, 1190, 1571
ApaLI GTGCAC 1 cut(s) 1751
ApeKI GCWGC 5 cut(s) 657, 800, 995, 1248, 1728
ApoI RAATTY 1 cut(s) 1106
ArsI GACNNNNNNTTYG 2 cut(s) 161, 193
AspA2I CCTAGG 1 cut(s) 455
AspLEI GCGC 3 cut(s) 421, 633, 1447
AspS9I GGNCC 4 cut(s) 514, 1080, 1457, 1571
AsuC2I CCSGG 1 cut(s) 1245
AsuHPI GGTGA 3 cut(s) 79, 785, 874
AsuNHI GCTAGC 2 cut(s) 935, 1027
AvaI CYCGRG 3 cut(s) 44, 92, 1380
AvaII GGWCC 2 cut(s) 514, 1457
AvrII CCTAGG 1 cut(s) 455
AxyI CCTNAGG 1 cut(s) 1076
BaeGI GKGCMC 1 cut(s) 1755
BanII GRGCYC 1 cut(s) 789
BbsI GAAGAC 2 cut(s) 180, 1436
Bbv12I GWGCWC 1 cut(s) 1755
BbvI GCAGC 5 cut(s) 669, 787, 982, 1260, 1740
BccI CCATC 7 cut(s) 64, 503, 706, 1168, 1634, 1683, 1709
BciT130I CCWGG 2 cut(s) 1189, 1569
BclI TGATCA 1 cut(s) 199
BcnI CCSGG 1 cut(s) 1245
BcoDI GTCTC 5 cut(s) 377, 666, 837, 1377, 1476
BfaI CTAG 8 cut(s) 122, 281, 456, 917, 936, 1028, 1596, 1631
BfmI CTRYAG 1 cut(s) 735
BfoI RGCGCY 1 cut(s) 1448
BfrI CTTAAG 3 cut(s) 337, 1253, 1682
BfuAI ACCTGC 1 cut(s) 1705
BglII AGATCT 1 cut(s) 960
BisI GCNGC 6 cut(s) 613, 658, 801, 996, 1249, 1729
BlnI CCTAGG 1 cut(s) 455
BlsI GCNGC 6 cut(s) 614, 659, 802, 997, 1250, 1730
BmcAI AGTACT 1 cut(s) 1037
Bme1390I CCNGG 3 cut(s) 1189, 1245, 1569
Bme18I GGWCC 2 cut(s) 514, 1457
BmeT110I CYCGRG 3 cut(s) 44, 92, 1380
BmgT120I GGNCC 4 cut(s) 514, 1080, 1457, 1571
BmiI GGNNCC 1 cut(s) 1082
BmrFI CCNGG 3 cut(s) 1189, 1245, 1569
BmrI ACTGGG 1 cut(s) 325
BmsI GCATC 2 cut(s) 202, 1168
BmtI GCTAGC 2 cut(s) 939, 1031
BmuI ACTGGG 1 cut(s) 325
BoxI GACNNNNGTC 1 cut(s) 1779
BpiI GAAGAC 2 cut(s) 180, 1436
BpuEI CTTGAG 2 cut(s) 47, 198
BpuMI CCSGG 1 cut(s) 1245
Bsa29I ATCGAT 1 cut(s) 926
BsaAI YACGTR 1 cut(s) 1021
BsaI GGTCTC 2 cut(s) 377, 666
BsaJI CCNNGG 3 cut(s) 455, 1567, 1568
BsaWI WCCGGW 1 cut(s) 1100
Bsc4I CCNNNNNNNGG 2 cut(s) 539, 1454
Bse118I RCCGGY 1 cut(s) 1271
Bse1I ACTGG 4 cut(s) 320, 972, 1424, 1779
Bse21I CCTNAGG 1 cut(s) 1076
Bse3DI GCAATG 1 cut(s) 534
BseAI TCCGGA 1 cut(s) 1100
BseBI CCWGG 2 cut(s) 1189, 1569
BseCI ATCGAT 1 cut(s) 926
BseDI CCNNGG 3 cut(s) 455, 1567, 1568
BseGI GGATG 6 cut(s) 39, 87, 1179, 1183, 1615, 1675
BseLI CCNNNNNNNGG 2 cut(s) 539, 1454
BseMI GCAATG 1 cut(s) 534
BseMII CTCAG 1 cut(s) 1784
BseNI ACTGG 4 cut(s) 320, 972, 1424, 1779
BseSI GKGCMC 1 cut(s) 1755
BseXI GCAGC 5 cut(s) 669, 787, 982, 1260, 1740
BsgI GTGCAG 1 cut(s) 1448
BshFI GGCC 5 cut(s) 643, 741, 1081, 1192, 1573
BshVI ATCGAT 1 cut(s) 926
BsiHKAI GWGCWC 1 cut(s) 1755
BsiHKCI CYCGRG 3 cut(s) 44, 92, 1380
BsiSI CCGG 4 cut(s) 540, 1101, 1245, 1272
BslFI GGGAC 5 cut(s) 43, 70, 203, 1550, 1658
BslI CCNNNNNNNGG 2 cut(s) 539, 1454
BsmAI GTCTC 5 cut(s) 377, 666, 837, 1377, 1476
BsmFI GGGAC 5 cut(s) 43, 70, 203, 1550, 1658
BsnI GGCC 5 cut(s) 643, 741, 1081, 1192, 1573
Bso31I GGTCTC 2 cut(s) 377, 666
BsoBI CYCGRG 3 cut(s) 44, 92, 1380
Bsp1286I GDGCHC 2 cut(s) 789, 1755
Bsp13I TCCGGA 1 cut(s) 1100
Bsp143I GATC 6 cut(s) 199, 708, 717, 960, 976, 1347
BspACI CCGC 5 cut(s) 613, 852, 1679, 1722, 1731
BspANI GGCC 5 cut(s) 643, 741, 1081, 1192, 1573
BspCNI CTCAG 1 cut(s) 1785
BspDI ATCGAT 1 cut(s) 926
BspEI TCCGGA 1 cut(s) 1100
BspHI TCATGA 1 cut(s) 196
BspLI GGNNCC 1 cut(s) 1082
BspMAI CTGCAG 1 cut(s) 739
BspMI ACCTGC 1 cut(s) 1705
BspOI GCTAGC 2 cut(s) 939, 1031
BspPI GGATC 4 cut(s) 703, 712, 971, 1342
BspQI GCTCTTC 2 cut(s) 570, 1005
BspTI CTTAAG 3 cut(s) 337, 1253, 1682
BspTNI GGTCTC 2 cut(s) 377, 666
BsrDI GCAATG 1 cut(s) 534
BsrFI RCCGGY 1 cut(s) 1271
BsrI ACTGG 4 cut(s) 320, 972, 1424, 1779
BssAI RCCGGY 1 cut(s) 1271
BssECI CCNNGG 3 cut(s) 455, 1567, 1568
BssMI GATC 6 cut(s) 199, 708, 717, 960, 976, 1347
BssT1I CCWWGG 1 cut(s) 455
Bst2UI CCWGG 2 cut(s) 1189, 1569
Bst4CI ACNGT 5 cut(s) 34, 254, 1199, 1221, 1415
Bst6I CTCTTC 2 cut(s) 570, 1005
BstAFI CTTAAG 3 cut(s) 337, 1253, 1682
BstAPI GCANNNNNTGC 1 cut(s) 743
BstBAI YACGTR 1 cut(s) 1021
BstC8I GCNNGC 3 cut(s) 739, 937, 1029
BstDEI CTNAG 4 cut(s) 760, 1076, 1116, 1793
BstEII GGTNACC 1 cut(s) 1375
BstF5I GGATG 6 cut(s) 39, 87, 1179, 1183, 1615, 1675
BstH2I RGCGCY 1 cut(s) 1448
BstHHI GCGC 3 cut(s) 421, 633, 1447
BstKTI GATC 6 cut(s) 202, 711, 720, 963, 979, 1350
BstMAI GTCTC 5 cut(s) 377, 666, 837, 1377, 1476
BstMBI GATC 6 cut(s) 199, 708, 717, 960, 976, 1347
BstMWI GCNNNNNNNGC 6 cut(s) 281, 389, 743, 1728, 1734, 1759
BstNI CCWGG 2 cut(s) 1189, 1569
BstNSI RCATGY 1 cut(s) 1161
BstPAI GACNNNNGTC 1 cut(s) 1779
BstPI GGTNACC 1 cut(s) 1375
BstSCI CCNGG 3 cut(s) 1187, 1243, 1567
BstSFI CTRYAG 1 cut(s) 735
BstSLI GKGCMC 1 cut(s) 1755
BstSNI TACGTA 1 cut(s) 1021
BstV1I GCAGC 5 cut(s) 669, 787, 982, 1260, 1740
BstV2I GAAGAC 2 cut(s) 180, 1436
BstX2I RGATCY 3 cut(s) 708, 717, 960
BstXI CCANNNNNNTGG 2 cut(s) 796, 1333
BstYI RGATCY 3 cut(s) 708, 717, 960
Bsu15I ATCGAT 1 cut(s) 926
Bsu36I CCTNAGG 1 cut(s) 1076
BsuRI GGCC 5 cut(s) 643, 741, 1081, 1192, 1573
BsuTUI ATCGAT 1 cut(s) 926
BtgZI GCGATG 1 cut(s) 1648
BtsCI GGATG 6 cut(s) 39, 87, 1179, 1183, 1615, 1675
BtsI GCAGTG 3 cut(s) 277, 1460, 1511
BtsIMutI CAGTG 5 cut(s) 277, 979, 1431, 1460, 1511
BveI ACCTGC 1 cut(s) 1705
Cac8I GCNNGC 3 cut(s) 739, 937, 1029
CciI TCATGA 1 cut(s) 196
CfoI GCGC 3 cut(s) 421, 633, 1447
Cfr10I RCCGGY 1 cut(s) 1271
Cfr13I GGNCC 4 cut(s) 514, 1080, 1457, 1571
ClaI ATCGAT 1 cut(s) 926
CseI GACGC 1 cut(s) 1751
Csp6I GTAC 4 cut(s) 1036, 1369, 1411, 1506
CviAII CATG 8 cut(s) 104, 197, 713, 766, 1158, 1333, 1363, 1372
CviQI GTAC 4 cut(s) 1036, 1369, 1411, 1506
DdeI CTNAG 4 cut(s) 760, 1076, 1116, 1793
DpnI GATC 6 cut(s) 201, 710, 719, 962, 978, 1349
DpnII GATC 6 cut(s) 199, 708, 717, 960, 976, 1347
DraIII CACNNNGTG 1 cut(s) 1329
Eam1104I CTCTTC 2 cut(s) 570, 1005
EarI CTCTTC 2 cut(s) 570, 1005
Eco105I TACGTA 1 cut(s) 1021
Eco130I CCWWGG 1 cut(s) 455
Eco147I AGGCCT 2 cut(s) 643, 741
Eco24I GRGCYC 1 cut(s) 789
Eco31I GGTCTC 2 cut(s) 377, 666
Eco32I GATATC 1 cut(s) 334
Eco47I GGWCC 2 cut(s) 514, 1457
Eco81I CCTNAGG 1 cut(s) 1076
Eco88I CYCGRG 3 cut(s) 44, 92, 1380
Eco91I GGTNACC 1 cut(s) 1375
EcoO109I RGGNCCY 1 cut(s) 1080
EcoO65I GGTNACC 1 cut(s) 1375
EcoRII CCWGG 2 cut(s) 1187, 1567
EcoRV GATATC 1 cut(s) 334
EcoT14I CCWWGG 1 cut(s) 455
EcoT22I ATGCAT 2 cut(s) 1159, 1183
EcoT38I GRGCYC 1 cut(s) 789
ErhI CCWWGG 1 cut(s) 455
FaeI CATG 8 cut(s) 107, 200, 716, 769, 1161, 1336, 1366, 1375
FaqI GGGAC 5 cut(s) 43, 70, 203, 1550, 1658
FatI CATG 8 cut(s) 103, 196, 712, 765, 1157, 1332, 1362, 1371
FbaI TGATCA 1 cut(s) 199
FblI GTMKAC 2 cut(s) 327, 1216
Fnu4HI GCNGC 6 cut(s) 613, 658, 801, 996, 1249, 1729
FokI GGATG 6 cut(s) 26, 74, 1186, 1190, 1602, 1662
FriOI GRGCYC 1 cut(s) 789
Fsp4HI GCNGC 6 cut(s) 613, 658, 801, 996, 1249, 1729
FspBI CTAG 8 cut(s) 122, 281, 456, 917, 936, 1028, 1596, 1631
GlaI GCGC 3 cut(s) 420, 632, 1446
GluI GCNGC 6 cut(s) 613, 658, 801, 996, 1249, 1729
HaeII RGCGCY 1 cut(s) 1448
HaeIII GGCC 5 cut(s) 643, 741, 1081, 1192, 1573
HapII CCGG 4 cut(s) 540, 1101, 1245, 1272
HgaI GACGC 1 cut(s) 1751
HhaI GCGC 3 cut(s) 421, 633, 1447
Hin1II CATG 8 cut(s) 107, 200, 716, 769, 1161, 1336, 1366, 1375
Hin6I GCGC 3 cut(s) 419, 631, 1445
HinP1I GCGC 3 cut(s) 419, 631, 1445
HincII GTYRAC 2 cut(s) 605, 1217
HindII GTYRAC 2 cut(s) 605, 1217
HindIII AAGCTT 1 cut(s) 353
HinfI GANTC 9 cut(s) 50, 100, 601, 859, 1130, 1304, 1534, 1646, 1655
HpaII CCGG 4 cut(s) 540, 1101, 1245, 1272
HphI GGTGA 3 cut(s) 79, 785, 874
Hpy166II GTNNAC 9 cut(s) 99, 328, 605, 1202, 1217, 1411, 1508, 1753, 1799
Hpy188I TCNGA 8 cut(s) 204, 648, 703, 722, 1287, 1476, 1524, 1767
Hpy188III TCNNGA 5 cut(s) 22, 197, 362, 1101, 1631
Hpy8I GTNNAC 9 cut(s) 99, 328, 605, 1202, 1217, 1411, 1508, 1753, 1799
Hpy99I CGWCG 1 cut(s) 1767
HpyCH4III ACNGT 5 cut(s) 34, 254, 1199, 1221, 1415
HpyCH4IV ACGT 5 cut(s) 1020, 1340, 1497, 1563, 1717
HpyF10VI GCNNNNNNNGC 6 cut(s) 281, 389, 743, 1728, 1734, 1759
HpyF3I CTNAG 4 cut(s) 760, 1076, 1116, 1793
HpySE526I ACGT 5 cut(s) 1020, 1340, 1497, 1563, 1717
Hsp92II CATG 8 cut(s) 107, 200, 716, 769, 1161, 1336, 1366, 1375
HspAI GCGC 3 cut(s) 419, 631, 1445
Kpn2I TCCGGA 1 cut(s) 1100
Ksp22I TGATCA 1 cut(s) 199
Kzo9I GATC 6 cut(s) 199, 708, 717, 960, 976, 1347
LguI GCTCTTC 2 cut(s) 570, 1005
LmnI GCTCC 2 cut(s) 267, 623
Lsp1109I GCAGC 5 cut(s) 669, 787, 982, 1260, 1740
LweI GCATC 2 cut(s) 202, 1168
MaeI CTAG 8 cut(s) 122, 281, 456, 917, 936, 1028, 1596, 1631
MaeII ACGT 5 cut(s) 1020, 1340, 1497, 1563, 1717
MaeIII GTNAC 7 cut(s) 106, 880, 894, 1160, 1336, 1375, 1498
MalI GATC 6 cut(s) 201, 710, 719, 962, 978, 1349
MboI GATC 6 cut(s) 199, 708, 717, 960, 976, 1347
MboII GAAGA 7 cut(s) 180, 587, 788, 992, 1441, 1499, 1646
MflI RGATCY 3 cut(s) 708, 717, 960
MhlI GDGCHC 2 cut(s) 789, 1755
MluCI AATT 3 cut(s) 519, 985, 1106
MlyI GAGTC 4 cut(s) 94, 610, 1124, 1640
MmeI TCCRAC 2 cut(s) 745, 1745
Mph1103I ATGCAT 2 cut(s) 1159, 1183
MroI TCCGGA 1 cut(s) 1100
MseI TTAA 5 cut(s) 338, 693, 1254, 1683, 1758
MslI CAYNNNNRTG 2 cut(s) 1021, 1316
MspA1I CMGCKG 3 cut(s) 569, 995, 1731
MspCI CTTAAG 3 cut(s) 337, 1253, 1682
MspI CCGG 4 cut(s) 540, 1101, 1245, 1272
MspR9I CCNGG 3 cut(s) 1189, 1245, 1569
MvaI CCWGG 2 cut(s) 1189, 1569
MwoI GCNNNNNNNGC 6 cut(s) 281, 389, 743, 1728, 1734, 1759
NciI CCSGG 1 cut(s) 1245
NdeII GATC 6 cut(s) 199, 708, 717, 960, 976, 1347
NheI GCTAGC 2 cut(s) 935, 1027
NlaIII CATG 8 cut(s) 107, 200, 716, 769, 1161, 1336, 1366, 1375
NlaIV GGNNCC 1 cut(s) 1082
NmuCI GTSAC 4 cut(s) 106, 880, 894, 1160
NsiI ATGCAT 2 cut(s) 1159, 1183
NspI RCATGY 1 cut(s) 1161
PaeR7I CTCGAG 2 cut(s) 44, 92
PagI TCATGA 1 cut(s) 196
PasI CCCWGGG 1 cut(s) 1568
PceI AGGCCT 2 cut(s) 643, 741
PciSI GCTCTTC 2 cut(s) 570, 1005
PfeI GAWTC 5 cut(s) 50, 859, 1304, 1534, 1655
PflFI GACNNNGTC 1 cut(s) 1388
PkrI GCNGC 6 cut(s) 614, 659, 802, 997, 1250, 1730
PleI GAGTC 4 cut(s) 94, 609, 1124, 1640
PpsI GAGTC 4 cut(s) 94, 609, 1124, 1640
Ppu21I YACGTR 1 cut(s) 1021
PshAI GACNNNNGTC 1 cut(s) 1779
Psp1406I AACGTT 2 cut(s) 1340, 1497
Psp6I CCWGG 2 cut(s) 1187, 1567
PspEI GGTNACC 1 cut(s) 1375
PspGI CCWGG 2 cut(s) 1187, 1567
PspN4I GGNNCC 1 cut(s) 1082
PspPI GGNCC 4 cut(s) 514, 1080, 1457, 1571
PspXI VCTCGAGB 2 cut(s) 44, 92
PstI CTGCAG 1 cut(s) 739
PsuI RGATCY 3 cut(s) 708, 717, 960
PsyI GACNNNGTC 1 cut(s) 1388
PvuII CAGCTG 2 cut(s) 569, 995
RsaI GTAC 4 cut(s) 1037, 1370, 1412, 1507
RsaNI GTAC 4 cut(s) 1036, 1369, 1411, 1506
RseI CAYNNNNRTG 2 cut(s) 1021, 1316
SalI GTCGAC 1 cut(s) 1215
SapI GCTCTTC 2 cut(s) 570, 1005
SaqAI TTAA 5 cut(s) 338, 693, 1254, 1683, 1758
SatI GCNGC 6 cut(s) 613, 658, 801, 996, 1249, 1729
Sau3AI GATC 6 cut(s) 199, 708, 717, 960, 976, 1347
Sau96I GGNCC 4 cut(s) 514, 1080, 1457, 1571
SbfI CCTGCAGG 1 cut(s) 739
ScaI AGTACT 1 cut(s) 1037
SchI GAGTC 4 cut(s) 94, 610, 1124, 1640
ScrFI CCNGG 3 cut(s) 1189, 1245, 1569
SdaI CCTGCAGG 1 cut(s) 739
SduI GDGCHC 2 cut(s) 789, 1755
SfaNI GCATC 2 cut(s) 202, 1168
SfcI CTRYAG 1 cut(s) 735
Sfr274I CTCGAG 2 cut(s) 44, 92
SgrAI CRCCGGYG 1 cut(s) 1271
SinI GGWCC 2 cut(s) 514, 1457
SlaI CTCGAG 2 cut(s) 44, 92
SmiMI CAYNNNNRTG 2 cut(s) 1021, 1316
SmlI CTYRAG 7 cut(s) 44, 62, 92, 213, 337, 1253, 1682
SmoI CTYRAG 7 cut(s) 44, 62, 92, 213, 337, 1253, 1682
SnaBI TACGTA 1 cut(s) 1021
Sse8387I CCTGCAGG 1 cut(s) 739
Sse9I AATT 3 cut(s) 519, 985, 1106
SseBI AGGCCT 2 cut(s) 643, 741
SsiI CCGC 5 cut(s) 613, 852, 1679, 1722, 1731
SspI AATATT 1 cut(s) 909
SspMI CTAG 8 cut(s) 122, 281, 456, 917, 936, 1028, 1596, 1631
StuI AGGCCT 2 cut(s) 643, 741
StyD4I CCNGG 3 cut(s) 1187, 1243, 1567
StyI CCWWGG 1 cut(s) 455
TaaI ACNGT 5 cut(s) 34, 254, 1199, 1221, 1415
TaiI ACGT 5 cut(s) 1023, 1343, 1500, 1566, 1720
TaqI TCGA 8 cut(s) 45, 93, 133, 379, 926, 1041, 1216, 1392
TasI AATT 3 cut(s) 519, 985, 1106
TatI WGTACW 2 cut(s) 1035, 1368
TauI GCSGC 1 cut(s) 615
TfiI GAWTC 5 cut(s) 50, 859, 1304, 1534, 1655
Tru1I TTAA 5 cut(s) 338, 693, 1254, 1683, 1758
Tru9I TTAA 5 cut(s) 338, 693, 1254, 1683, 1758
TscAI CASTG 5 cut(s) 277, 979, 1431, 1467, 1518
TseFI GTSAC 4 cut(s) 106, 880, 894, 1160
TseI GCWGC 5 cut(s) 657, 800, 995, 1248, 1728
Tsp45I GTSAC 4 cut(s) 106, 880, 894, 1160
TspDTI ATGAA 2 cut(s) 998, 1334
TspGWI ACGGA 1 cut(s) 1660
TspRI CASTG 5 cut(s) 277, 979, 1431, 1467, 1518
Tth111I GACNNNGTC 1 cut(s) 1388
Vha464I CTTAAG 3 cut(s) 337, 1253, 1682
VneI GTGCAC 1 cut(s) 1751
VpaK11BI GGWCC 2 cut(s) 514, 1457
XapI RAATTY 1 cut(s) 1106
XbaI TCTAGA 1 cut(s) 1630
XceI RCATGY 1 cut(s) 1161
XhoI CTCGAG 2 cut(s) 44, 92
XmaJI CCTAGG 1 cut(s) 455
XmiI GTMKAC 2 cut(s) 327, 1216
XspI CTAG 8 cut(s) 122, 281, 456, 917, 936, 1028, 1596, 1631
ZrmI AGTACT 1 cut(s) 1037
Zsp2I ATGCAT 2 cut(s) 1159, 1183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.