Rmu_sc0011242.1_g000004

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011242.1
OG0000179
Physical Location & Seq
Forward (+)
25618 .. 28775
3158 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011242.1_g000004.1.cds

Sequence Viewer

Length: 1626 bp
atggctttcttcaagtgcttcaagaacgggacatttaccatccttgaggatccggaggacactcaaagtgatgacactactataggagctttgcgctataagaggcctcctaagaaaagcaacaggaacaaaagagatctgcccccgaatgcgtttaatccatctggcaagatccatgagttccgacaacaaactcttgcagaccttgcagtatttgataaattaggcatggagggtgaagatatagagccctcctatttggttgcctttcttgcttgttggttgtgcctgtttgttttacctagagacaacatcagtttgattcgttggggagtattcaaagttgccagcaaaatggcacaaggtctaaaattttgcctagcagtactggtgttggctagcctttatcagggtttgaacgagatctctgtttccagtgattcaagtaattgttcagctgctcttccttttcattatatatacgtatggctagcagagtacttcggcactcactttcaatctccacttcccaaccacctaaggccctatatggttcgcttcttcgaagaattttcagctaagcattttggggactcacaggctctttctttgttcaatgcatgtgacaatgtgaggatgaatgcattttccagggcattttcggagagcagagtgattatcaaccacaataacatctcccatttagacttcatatatctcatcagcattcgatcagggtatctttctctcagacaggataacagactagtcattcagccatacagtccacatcggtttagtcgacagtttgtttatatccaagacattcctggcagccttaagaatgacatttgcactggcggggcagagattgatggtcatccactttgggggaacgatgacgcctcttcaaaccctatacgtgttccttctgcagcggaacttgaggcttactctttacccatgaaagaaacatccaatgcaaagaatgacttacagcaaattgaccctacaggtccacttaccaaggtgcatcctcctaagcctctgaacaccaaagccttttttgaggcatctcttggtggagctactattatagatgctagccaaaaacttcatatgataatgaagcactcctcaaagaccattctttccaggaagggggaacttgacaagctgatagctgagcttagcctttatgggattgatccttcattcgtaaggggtaaagttgagggattgctgactagtgctaaccaatacaacttggcacgacattcttgttcacgcaagggtactccaggcacatgtaatcaacgtctggctgacacagagtcagaaattgcaaaggtcacttcaacttgtcaagctaactctgatcatcgtcaatctacgctcaagtctttggagaaatcaaaggaggaacagcgaaaattggagcaaatagtgacttcactagacgagaaacttctactacatgagaagaagcttattgacttagaaagagagaagactcaaatcaaagagacccccgagttgaccactgcagagcttgagacgataaaatcattgcgagatatttttgagagccaccgcaatagcttcaagggtttaacttgggtgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

541

Amino Acids

61.02

Weight (kDa)

7.95

Isoelectric Point (pI)

41.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 802
AccIII TCCGGA 1 cut(s) 52
AciI CCGC 3 cut(s) 861, 938, 1594
AclWI GGATC 4 cut(s) 44, 57, 166, 1202
AcsI RAATTY 2 cut(s) 371, 569
AcyI GRCGYC 1 cut(s) 903
AfaI GTAC 3 cut(s) 387, 500, 1297
AfiI CCNNNNNNNGG 3 cut(s) 409, 890, 1161
AflII CTTAAG 1 cut(s) 839
AflIII ACRYGT 2 cut(s) 922, 1307
AhdI GACNNNNNGTC 1 cut(s) 1333
AhlI ACTAGT 2 cut(s) 766, 1247
AjnI CCWGG 4 cut(s) 650, 829, 1154, 1300
Alw26I GTCTC 3 cut(s) 300, 1520, 1550
AlwI GGATC 4 cut(s) 44, 57, 166, 1202
Ama87I CYCGRG 1 cut(s) 1532
Aor13HI TCCGGA 1 cut(s) 52
AoxI GGCC 2 cut(s) 104, 542
ApeKI GCWGC 3 cut(s) 458, 834, 935
ApoI RAATTY 2 cut(s) 371, 569
AspLEI GCGC 1 cut(s) 96
AspS9I GGNCC 2 cut(s) 543, 1016
AsuHPI GGTGA 1 cut(s) 248
AsuII TTCGAA 1 cut(s) 564
AsuNHI GCTAGC 3 cut(s) 398, 490, 1103
AvaI CYCGRG 1 cut(s) 1532
AvaII GGWCC 1 cut(s) 1016
AxyI CCTNAGG 1 cut(s) 539
BamHI GGATCC 1 cut(s) 49
BanII GRGCYC 1 cut(s) 252
BbsI GAAGAC 1 cut(s) 1517
BbvI GCAGC 3 cut(s) 445, 846, 947
BccI CCATC 3 cut(s) 47, 169, 869
BciT130I CCWGG 4 cut(s) 652, 831, 1156, 1302
BclI TGATCA 1 cut(s) 1378
BcoDI GTCTC 3 cut(s) 300, 1520, 1550
BcuI ACTAGT 2 cut(s) 766, 1247
BfaI CTAG 8 cut(s) 303, 380, 399, 491, 767, 1104, 1248, 1457
BfmI CTRYAG 4 cut(s) 81, 933, 1011, 1545
BfrI CTTAAG 1 cut(s) 839
BglII AGATCT 2 cut(s) 136, 423
BisI GCNGC 3 cut(s) 459, 835, 936
BlpI GCTNAGC 3 cut(s) 579, 1185, 1190
BlsI GCNGC 3 cut(s) 460, 836, 937
BmcAI AGTACT 2 cut(s) 387, 500
Bme1390I CCNGG 4 cut(s) 652, 831, 1156, 1302
Bme18I GGWCC 1 cut(s) 1016
BmeRI GACNNNNNGTC 1 cut(s) 1333
BmeT110I CYCGRG 1 cut(s) 1532
BmgT120I GGNCC 2 cut(s) 543, 1016
BmiI GGNNCC 1 cut(s) 51
BmrFI CCNGG 4 cut(s) 652, 831, 1156, 1302
BmsI GCATC 3 cut(s) 1042, 1082, 1090
BmtI GCTAGC 3 cut(s) 402, 494, 1107
BpiI GAAGAC 1 cut(s) 1517
BplI GAGNNNNNCTC 2 cut(s) 938, 970
BpmI CTGGAG 1 cut(s) 1284
Bpu10I CCTNAGC 1 cut(s) 1041
Bpu1102I GCTNAGC 3 cut(s) 579, 1185, 1190
Bpu14I TTCGAA 1 cut(s) 564
BpuEI CTTGAG 4 cut(s) 65, 965, 1382, 1574
BsaAI YACGTR 2 cut(s) 484, 923
BsaBI GATNNNNATC 1 cut(s) 879
BsaHI GRCGYC 1 cut(s) 903
BsaI GGTCTC 1 cut(s) 1520
BsaJI CCNNGG 2 cut(s) 651, 1026
BsaWI WCCGGW 1 cut(s) 52
Bsc4I CCNNNNNNNGG 3 cut(s) 409, 890, 1161
Bse1I ACTGG 3 cut(s) 393, 435, 862
Bse21I CCTNAGG 1 cut(s) 539
Bse3DI GCAATG 1 cut(s) 1568
Bse8I GATNNNNATC 1 cut(s) 879
BseAI TCCGGA 1 cut(s) 52
BseBI CCWGG 4 cut(s) 652, 831, 1156, 1302
BseDI CCNNGG 2 cut(s) 651, 1026
BseGI GGATG 5 cut(s) 39, 642, 880, 974, 1033
BseJI GATNNNNATC 1 cut(s) 879
BseLI CCNNNNNNNGG 3 cut(s) 409, 890, 1161
BseMI GCAATG 1 cut(s) 1568
BseMII CTCAG 2 cut(s) 763, 1176
BseNI ACTGG 3 cut(s) 393, 435, 862
BseRI GAGGAG 1 cut(s) 1126
BseXI GCAGC 3 cut(s) 445, 846, 947
BshFI GGCC 2 cut(s) 106, 544
BsiHKCI CYCGRG 1 cut(s) 1532
BsiSI CCGG 1 cut(s) 53
BslFI GGGAC 2 cut(s) 43, 605
BslI CCNNNNNNNGG 3 cut(s) 409, 890, 1161
BsmAI GTCTC 3 cut(s) 300, 1520, 1550
BsmBI CGTCTC 1 cut(s) 1550
BsmFI GGGAC 2 cut(s) 43, 605
BsmI GAATGC 3 cut(s) 154, 646, 726
BsnI GGCC 2 cut(s) 106, 544
Bso31I GGTCTC 1 cut(s) 1520
BsoBI CYCGRG 1 cut(s) 1532
Bsp119I TTCGAA 1 cut(s) 564
Bsp1286I GDGCHC 1 cut(s) 252
Bsp13I TCCGGA 1 cut(s) 52
Bsp143I GATC 7 cut(s) 49, 136, 171, 423, 731, 1207, 1378
Bsp1720I GCTNAGC 3 cut(s) 579, 1185, 1190
BspACI CCGC 3 cut(s) 861, 938, 1594
BspANI GGCC 2 cut(s) 106, 544
BspCNI CTCAG 2 cut(s) 762, 1177
BspEI TCCGGA 1 cut(s) 52
BspLI GGNNCC 1 cut(s) 51
BspMAI CTGCAG 2 cut(s) 937, 1549
BspOI GCTAGC 3 cut(s) 402, 494, 1107
BspPI GGATC 4 cut(s) 44, 57, 166, 1202
BspQI GCTCTTC 1 cut(s) 468
BspT104I TTCGAA 1 cut(s) 564
BspTI CTTAAG 1 cut(s) 839
BspTNI GGTCTC 1 cut(s) 1520
BsrDI GCAATG 1 cut(s) 1568
BsrI ACTGG 3 cut(s) 393, 435, 862
BssECI CCNNGG 2 cut(s) 651, 1026
BssMI GATC 7 cut(s) 49, 136, 171, 423, 731, 1207, 1378
BssNI GRCGYC 1 cut(s) 903
BssT1I CCWWGG 1 cut(s) 1026
Bst2UI CCWGG 4 cut(s) 652, 831, 1156, 1302
Bst4CI ACNGT 2 cut(s) 785, 807
Bst6I CTCTTC 2 cut(s) 468, 913
BstACI GRCGYC 1 cut(s) 903
BstAFI CTTAAG 1 cut(s) 839
BstAPI GCANNNNNTGC 1 cut(s) 206
BstBAI YACGTR 2 cut(s) 484, 923
BstBI TTCGAA 1 cut(s) 564
BstC8I GCNNGC 4 cut(s) 349, 400, 492, 1105
BstDEI CTNAG 8 cut(s) 111, 539, 579, 749, 1041, 1185, 1190, 1498
BstENI CCTNNNNNAGG 1 cut(s) 407
BstF5I GGATG 5 cut(s) 39, 642, 880, 974, 1033
BstHHI GCGC 1 cut(s) 96
BstKTI GATC 7 cut(s) 52, 139, 174, 426, 734, 1210, 1381
BstMAI GTCTC 3 cut(s) 300, 1520, 1550
BstMBI GATC 7 cut(s) 49, 136, 171, 423, 731, 1207, 1378
BstMWI GCNNNNNNNGC 2 cut(s) 206, 272
BstNI CCWGG 4 cut(s) 652, 831, 1156, 1302
BstNSI RCATGY 2 cut(s) 624, 1311
BstSCI CCNGG 4 cut(s) 650, 829, 1154, 1300
BstSFI CTRYAG 4 cut(s) 81, 933, 1011, 1545
BstSNI TACGTA 1 cut(s) 484
BstV1I GCAGC 3 cut(s) 445, 846, 947
BstV2I GAAGAC 1 cut(s) 1517
BstX2I RGATCY 4 cut(s) 49, 136, 171, 423
BstXI CCANNNNNNTGG 1 cut(s) 355
BstYI RGATCY 4 cut(s) 49, 136, 171, 423
Bsu36I CCTNAGG 1 cut(s) 539
BsuRI GGCC 2 cut(s) 106, 544
BtsCI GGATG 5 cut(s) 39, 642, 880, 974, 1033
BtsI GCAGTG 1 cut(s) 1542
BtsIMutI CAGTG 3 cut(s) 442, 855, 1542
Cac8I GCNNGC 4 cut(s) 349, 400, 492, 1105
CfoI GCGC 1 cut(s) 96
Cfr13I GGNCC 2 cut(s) 543, 1016
CseI GACGC 1 cut(s) 911
Csp6I GTAC 3 cut(s) 386, 499, 1296
CviAII CATG 6 cut(s) 176, 229, 621, 964, 1308, 1478
CviQI GTAC 3 cut(s) 386, 499, 1296
DdeI CTNAG 8 cut(s) 111, 539, 579, 749, 1041, 1185, 1190, 1498
DpnI GATC 7 cut(s) 51, 138, 173, 425, 733, 1209, 1380
DpnII GATC 7 cut(s) 49, 136, 171, 423, 731, 1207, 1378
DriI GACNNNNNGTC 1 cut(s) 1333
Eam1104I CTCTTC 2 cut(s) 468, 913
Eam1105I GACNNNNNGTC 1 cut(s) 1333
EarI CTCTTC 2 cut(s) 468, 913
Eco105I TACGTA 1 cut(s) 484
Eco130I CCWWGG 1 cut(s) 1026
Eco147I AGGCCT 1 cut(s) 106
Eco24I GRGCYC 1 cut(s) 252
Eco31I GGTCTC 1 cut(s) 1520
Eco47I GGWCC 1 cut(s) 1016
Eco81I CCTNAGG 1 cut(s) 539
Eco88I CYCGRG 1 cut(s) 1532
EcoNI CCTNNNNNAGG 1 cut(s) 407
EcoO109I RGGNCCY 1 cut(s) 543
EcoRII CCWGG 4 cut(s) 650, 829, 1154, 1300
EcoT14I CCWWGG 1 cut(s) 1026
EcoT22I ATGCAT 2 cut(s) 622, 646
EcoT38I GRGCYC 1 cut(s) 252
ErhI CCWWGG 1 cut(s) 1026
Esp3I CGTCTC 1 cut(s) 1550
FaeI CATG 6 cut(s) 179, 232, 624, 967, 1311, 1481
FalI AAGNNNNNCTT 2 cut(s) 977, 1009
FaqI GGGAC 2 cut(s) 43, 605
FatI CATG 6 cut(s) 175, 228, 620, 963, 1307, 1477
FauI CCCGC 1 cut(s) 854
FauNDI CATATG 1 cut(s) 1119
FbaI TGATCA 1 cut(s) 1378
FblI GTMKAC 1 cut(s) 802
Fnu4HI GCNGC 3 cut(s) 459, 835, 936
FokI GGATG 5 cut(s) 26, 649, 867, 961, 1020
FriOI GRGCYC 1 cut(s) 252
Fsp4HI GCNGC 3 cut(s) 459, 835, 936
FspBI CTAG 8 cut(s) 303, 380, 399, 491, 767, 1104, 1248, 1457
GlaI GCGC 1 cut(s) 95
GluI GCNGC 3 cut(s) 459, 835, 936
GsuI CTGGAG 1 cut(s) 1284
HaeIII GGCC 2 cut(s) 106, 544
HapII CCGG 1 cut(s) 53
HgaI GACGC 1 cut(s) 911
HhaI GCGC 1 cut(s) 96
Hin1I GRCGYC 1 cut(s) 903
Hin1II CATG 6 cut(s) 179, 232, 624, 967, 1311, 1481
Hin6I GCGC 1 cut(s) 94
HinP1I GCGC 1 cut(s) 94
HincII GTYRAC 2 cut(s) 803, 1539
HindII GTYRAC 2 cut(s) 803, 1539
HindIII AAGCTT 1 cut(s) 1487
HinfI GANTC 5 cut(s) 322, 440, 593, 1334, 1513
HpaII CCGG 1 cut(s) 53
HphI GGTGA 1 cut(s) 248
Hpy166II GTNNAC 5 cut(s) 788, 803, 1019, 1286, 1539
Hpy188I TCNGA 6 cut(s) 185, 664, 752, 1050, 1339, 1378
Hpy188III TCNNGA 2 cut(s) 22, 53
Hpy8I GTNNAC 5 cut(s) 788, 803, 1019, 1286, 1539
HpyAV CCTTC 3 cut(s) 939, 1153, 1221
HpyCH4III ACNGT 2 cut(s) 785, 807
HpyCH4IV ACGT 3 cut(s) 483, 922, 1318
HpyF10VI GCNNNNNNNGC 2 cut(s) 206, 272
HpyF3I CTNAG 8 cut(s) 111, 539, 579, 749, 1041, 1185, 1190, 1498
HpySE526I ACGT 3 cut(s) 483, 922, 1318
Hsp92I GRCGYC 1 cut(s) 903
Hsp92II CATG 6 cut(s) 179, 232, 624, 967, 1311, 1481
HspAI GCGC 1 cut(s) 94
Kpn2I TCCGGA 1 cut(s) 52
Ksp22I TGATCA 1 cut(s) 1378
Kzo9I GATC 7 cut(s) 49, 136, 171, 423, 731, 1207, 1378
LguI GCTCTTC 1 cut(s) 468
LmnI GCTCC 3 cut(s) 86, 1085, 1438
Lsp1109I GCAGC 3 cut(s) 445, 846, 947
LweI GCATC 3 cut(s) 1042, 1082, 1090
MaeI CTAG 8 cut(s) 303, 380, 399, 491, 767, 1104, 1248, 1457
MaeII ACGT 3 cut(s) 483, 922, 1318
MaeIII GTNAC 3 cut(s) 623, 1351, 1447
MalI GATC 7 cut(s) 51, 138, 173, 425, 733, 1209, 1380
MboI GATC 7 cut(s) 49, 136, 171, 423, 731, 1207, 1378
MboII GAAGA 7 cut(s) 251, 455, 553, 578, 900, 1495, 1522
MflI RGATCY 4 cut(s) 49, 136, 171, 423
MhlI GDGCHC 1 cut(s) 252
MluCI AATT 7 cut(s) 221, 371, 448, 569, 1002, 1341, 1433
MlyI GAGTC 3 cut(s) 587, 1343, 1507
MmeI TCCRAC 1 cut(s) 208
Mph1103I ATGCAT 2 cut(s) 622, 646
MroI TCCGGA 1 cut(s) 52
MseI TTAA 3 cut(s) 156, 840, 1613
MspA1I CMGCKG 2 cut(s) 458, 938
MspCI CTTAAG 1 cut(s) 839
MspI CCGG 1 cut(s) 53
MspR9I CCNGG 4 cut(s) 652, 831, 1156, 1302
Mva1269I GAATGC 3 cut(s) 154, 646, 726
MvaI CCWGG 4 cut(s) 652, 831, 1156, 1302
MwoI GCNNNNNNNGC 2 cut(s) 206, 272
NdeI CATATG 1 cut(s) 1119
NdeII GATC 7 cut(s) 49, 136, 171, 423, 731, 1207, 1378
NheI GCTAGC 3 cut(s) 398, 490, 1103
NlaIII CATG 6 cut(s) 179, 232, 624, 967, 1311, 1481
NlaIV GGNNCC 1 cut(s) 51
NmuCI GTSAC 3 cut(s) 623, 1351, 1447
NsiI ATGCAT 2 cut(s) 622, 646
NspI RCATGY 2 cut(s) 624, 1311
NspV TTCGAA 1 cut(s) 564
PceI AGGCCT 1 cut(s) 106
PciI ACATGT 1 cut(s) 1307
PciSI GCTCTTC 1 cut(s) 468
PcsI WCGNNNNNNNCGW 1 cut(s) 799
PctI GAATGC 3 cut(s) 154, 646, 726
PfeI GAWTC 2 cut(s) 322, 440
PfoI TCCNGGA 1 cut(s) 1154
PkrI GCNGC 3 cut(s) 460, 836, 937
PleI GAGTC 3 cut(s) 587, 1342, 1507
PpsI GAGTC 3 cut(s) 587, 1342, 1507
Ppu21I YACGTR 2 cut(s) 484, 923
PscI ACATGT 1 cut(s) 1307
Psp6I CCWGG 4 cut(s) 650, 829, 1154, 1300
PspGI CCWGG 4 cut(s) 650, 829, 1154, 1300
PspN4I GGNNCC 1 cut(s) 51
PspPI GGNCC 2 cut(s) 543, 1016
PstI CTGCAG 2 cut(s) 937, 1549
PsuI RGATCY 4 cut(s) 49, 136, 171, 423
PvuII CAGCTG 1 cut(s) 458
RsaI GTAC 3 cut(s) 387, 500, 1297
RsaNI GTAC 3 cut(s) 386, 499, 1296
SalI GTCGAC 1 cut(s) 801
SapI GCTCTTC 1 cut(s) 468
SaqAI TTAA 3 cut(s) 156, 840, 1613
SatI GCNGC 3 cut(s) 459, 835, 936
Sau3AI GATC 7 cut(s) 49, 136, 171, 423, 731, 1207, 1378
Sau96I GGNCC 2 cut(s) 543, 1016
ScaI AGTACT 2 cut(s) 387, 500
SchI GAGTC 3 cut(s) 587, 1343, 1507
ScrFI CCNGG 4 cut(s) 652, 831, 1156, 1302
SduI GDGCHC 1 cut(s) 252
SfaNI GCATC 3 cut(s) 1042, 1082, 1090
SfcI CTRYAG 4 cut(s) 81, 933, 1011, 1545
SfuI TTCGAA 1 cut(s) 564
SinI GGWCC 1 cut(s) 1016
SmlI CTYRAG 5 cut(s) 44, 839, 944, 1397, 1553
SmoI CTYRAG 5 cut(s) 44, 839, 944, 1397, 1553
SnaBI TACGTA 1 cut(s) 484
SpeI ACTAGT 2 cut(s) 766, 1247
Sse9I AATT 7 cut(s) 221, 371, 448, 569, 1002, 1341, 1433
SseBI AGGCCT 1 cut(s) 106
SsiI CCGC 3 cut(s) 861, 938, 1594
SspMI CTAG 8 cut(s) 303, 380, 399, 491, 767, 1104, 1248, 1457
StuI AGGCCT 1 cut(s) 106
StyD4I CCNGG 4 cut(s) 650, 829, 1154, 1300
StyI CCWWGG 1 cut(s) 1026
TaaI ACNGT 2 cut(s) 785, 807
TaiI ACGT 3 cut(s) 486, 925, 1321
TaqI TCGA 3 cut(s) 564, 730, 802
TasI AATT 7 cut(s) 221, 371, 448, 569, 1002, 1341, 1433
TatI WGTACW 2 cut(s) 385, 498
TfiI GAWTC 2 cut(s) 322, 440
Tru1I TTAA 3 cut(s) 156, 840, 1613
Tru9I TTAA 3 cut(s) 156, 840, 1613
TscAI CASTG 3 cut(s) 442, 862, 1549
TseFI GTSAC 3 cut(s) 623, 1351, 1447
TseI GCWGC 3 cut(s) 458, 834, 935
Tsp45I GTSAC 3 cut(s) 623, 1351, 1447
TspDTI ATGAA 7 cut(s) 461, 653, 700, 980, 1106, 1142, 1203
TspRI CASTG 3 cut(s) 442, 862, 1549
Vha464I CTTAAG 1 cut(s) 839
VpaK11BI GGWCC 1 cut(s) 1016
XagI CCTNNNNNAGG 1 cut(s) 407
XapI RAATTY 2 cut(s) 371, 569
XceI RCATGY 2 cut(s) 624, 1311
XcmI CCANNNNNNNNNTGG 1 cut(s) 827
XmiI GTMKAC 1 cut(s) 802
XspI CTAG 8 cut(s) 303, 380, 399, 491, 767, 1104, 1248, 1457
ZrmI AGTACT 2 cut(s) 387, 500
Zsp2I ATGCAT 2 cut(s) 622, 646
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.