Rmu_sc0005044.1_g000027

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005044.1
OG0000179
Physical Location & Seq
Forward (+)
132270 .. 135443
3174 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005044.1_g000027.1.cds

Sequence Viewer

Length: 2112 bp
atggctttctttaagtgcttcaagaaagggacagtcaccatcgaccttgaggatccggatgacactcaaagtgatggcactactttgcaggtgtatccatcgttgactgggcctcaagcaatcgatgtccctccttatgaccctacagctcacatcctccagtggactcatgtggtacatcgccaactagctatgtttcgtcaaccaagatctggcagagaccaacaaaactcgcatgtactgttgctgaagtcttcgcatcatgatcagaacactcctcagactccattcacgcttctcagcgatcgtatatgcaacggttcagtgcagtggagcagtgcatttcaagtaaatgggggcttctcttacacagagttctactgggaatggtcatacgggctttctgcgagtactggtgccccacgacgaataccctccacacatctagtggagaaatatccagctccctctaggatttggaccaactcggaggtttgcccattgctggacggttttatgatgaggtggttccagctgctgaagagctttctgcaacaagcaaaaggagtcagaagagctgccgctatttgtttctcgcctaccataagctttgcaaagaaggccaagggcagaaagatccatgagatccgacaactaacttctacagacctcgcagtatttgatgacttaggcgtggagggtgaagatatagagcccacctatttggctgcctttctttcttgttggttgtgcctgtttgttttacccagagacgatactggtttgattcgttcgggagtattcaaagttgccagcaaaatgtcacagggtaactgctcggctgctcttccttttcagtatatttatgcatggctagcagagtactttggcacccactttcagtctccacttcccaacgacctaaggccccgtatggttcgcttctttggagaattttcagctaaacattttggggactcacaggcgctttctttgttcaatgcatgtgacaatgtgaggatggatgcatttgctagggtattttcagagagcagagtgatcatcaaccgcgataacatcgcccatttagacttcatatatctcattagccttcgatctaggtatctttctctcagacaggataaccgacgagcaacgaaagtagtgcctactagtggaccactgcacaagactctaaaagcaaaagaagataagaacgtcacctgtgcaacaccatctcatcacaaaaatgtgattccttgtgaagttgaatgtagcaccaacgtccctacacctcttgatagggcttttctcccagatagcgaccgtcaaactcatctggtcgacattctagaagatgatggagactctttagattctcacatcgctttggtccatccacttaagctgaaaagacccacaatccaagaaagaaggcatagtgggagcagtagtagcaataatagtgaggtacactttaagcgtaagaagactgacatcaaccttggccctacttattgtgatctcaatactaagtatactctaaataccgactttcttgatgctagccaaagacttcgtgatatccgtcaacaagctgctaccacagtttgtgaacaaattgaagatatgataatgaagcactcctcaaagaccattctttccagcaagggggaacttgacaagctgatagctaaacttagccattatgggattgatccttcatccgtaaggggaaaagttgagggattgttgactagtactgaccaatacaacctggcacggctttcttgttcacgcaaggctactccaggcacacgtaatcaacgtctggctgacacagagtcagaaattgcaaaggccatttcaattcgtcaagctgactttgatcatcgccaatctgcactcaagtctttggagaaattaaaggaggagcaacgaaaattggagcaaacaatgactttactagacgagagacttttactacgggagaagaagcttgtcgaactagaaaaagagaagactcaaatccaagagcttgagacgacaaaatcattgcgagatatttttgagagccaccgtaatagcttcaagggtttgacttgggtgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

703

Amino Acids

79.88

Weight (kDa)

8.74

Isoelectric Point (pI)

44.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 79
Acc36I ACCTGC 1 cut(s) 79
AccB1I GGYRCC 2 cut(s) 416, 890
AccB7I CCANNNNNTGG 1 cut(s) 212
AccI GTMKAC 2 cut(s) 1344, 1538
AccII CGCG 1 cut(s) 1071
AccIII TCCGGA 1 cut(s) 55
AciI CCGC 2 cut(s) 582, 1069
AclWI GGATC 5 cut(s) 47, 60, 631, 640, 1712
AcsI RAATTY 1 cut(s) 953
AcuI CTGAAG 2 cut(s) 269, 560
AfaI GTAC 6 cut(s) 177, 240, 412, 884, 1473, 1762
AfiI CCNNNNNNNGG 4 cut(s) 212, 505, 1175, 1671
AflII CTTAAG 1 cut(s) 1403
AflIII ACRYGT 1 cut(s) 1817
AgsI TTSAA 8 cut(s) 22, 347, 805, 1000, 1271, 1625, 1869, 2092
AhdI GACNNNNNGTC 1 cut(s) 1843
AhlI ACTAGT 2 cut(s) 1172, 1757
AjnI CCWGG 2 cut(s) 1776, 1810
Alw26I GTCTC 6 cut(s) 213, 765, 909, 1359, 1969, 2036
AlwI GGATC 5 cut(s) 47, 60, 631, 640, 1712
AlwNI CAGNNNCTG 1 cut(s) 538
Aor13HI TCCGGA 1 cut(s) 55
AoxI GGCC 5 cut(s) 110, 621, 926, 1507, 1860
ApeKI GCWGC 5 cut(s) 535, 578, 728, 842, 1598
ApoI RAATTY 1 cut(s) 953
AspLEI GCGC 1 cut(s) 988
AspS9I GGNCC 6 cut(s) 110, 480, 927, 1178, 1393, 1508
AsuHPI GGTGA 3 cut(s) 28, 713, 1213
AsuNHI GCTAGC 2 cut(s) 874, 1565
AvaII GGWCC 3 cut(s) 480, 1178, 1393
AxyI CCTNAGG 1 cut(s) 923
BaeGI GKGCMC 1 cut(s) 421
BamHI GGATCC 1 cut(s) 52
BanI GGYRCC 2 cut(s) 416, 890
BanII GRGCYC 1 cut(s) 717
BbsI GAAGAC 3 cut(s) 246, 1496, 2027
BbvI GCAGC 5 cut(s) 522, 565, 715, 829, 1585
BccI CCATC 7 cut(s) 47, 68, 106, 1015, 1243, 1355, 1404
BceAI ACGGC 1 cut(s) 1799
BcgI CGANNNNNNTGC 2 cut(s) 1147, 1181
BciT130I CCWGG 2 cut(s) 1778, 1812
BciVI GTATCC 1 cut(s) 105
BclI TGATCA 3 cut(s) 265, 1059, 1888
BcoDI GTCTC 6 cut(s) 213, 765, 909, 1359, 1969, 2036
BcuI ACTAGT 2 cut(s) 1172, 1757
BfmI CTRYAG 2 cut(s) 144, 663
BfoI RGCGCY 1 cut(s) 989
BfrI CTTAAG 1 cut(s) 1403
BfuAI ACCTGC 1 cut(s) 79
BfuI GTATCC 1 cut(s) 105
BglII AGATCT 1 cut(s) 209
BisI GCNGC 6 cut(s) 536, 579, 582, 729, 843, 1599
BlsI GCNGC 6 cut(s) 537, 580, 583, 730, 844, 1600
BmcAI AGTACT 3 cut(s) 412, 884, 1762
Bme1390I CCNGG 2 cut(s) 1778, 1812
Bme18I GGWCC 3 cut(s) 480, 1178, 1393
BmeRI GACNNNNNGTC 1 cut(s) 1843
BmgT120I GGNCC 6 cut(s) 110, 480, 927, 1178, 1393, 1508
BmiI GGNNCC 5 cut(s) 54, 418, 530, 892, 929
BmrFI CCNGG 2 cut(s) 1778, 1812
BmrI ACTGGG 2 cut(s) 117, 391
BmsI GCATC 3 cut(s) 268, 1015, 1552
BmtI GCTAGC 2 cut(s) 878, 1569
BmuI ACTGGG 2 cut(s) 117, 391
BpiI GAAGAC 3 cut(s) 246, 1496, 2027
BpmI CTGGAG 2 cut(s) 143, 1794
BpuEI CTTGAG 4 cut(s) 68, 99, 1892, 2060
Bsa29I ATCGAT 1 cut(s) 123
BsaAI YACGTR 1 cut(s) 1820
BsaI GGTCTC 1 cut(s) 213
BsaJI CCNNGG 2 cut(s) 624, 1504
BsaWI WCCGGW 1 cut(s) 55
BsaXI ACNNNNNCTCC 2 cut(s) 1438, 1468
Bsc4I CCNNNNNNNGG 4 cut(s) 212, 505, 1175, 1671
Bse1I ACTGG 5 cut(s) 112, 160, 386, 418, 784
Bse21I CCTNAGG 1 cut(s) 923
Bse3DI GCAATG 2 cut(s) 500, 2054
BseAI TCCGGA 1 cut(s) 55
BseBI CCWGG 2 cut(s) 1778, 1812
BseCI ATCGAT 1 cut(s) 123
BseDI CCNNGG 2 cut(s) 624, 1504
BseGI GGATG 6 cut(s) 64, 153, 1026, 1030, 1396, 1724
BseLI CCNNNNNNNGG 4 cut(s) 212, 505, 1175, 1671
BseMI GCAATG 2 cut(s) 500, 2054
BseMII CTCAG 3 cut(s) 293, 313, 1147
BseNI ACTGG 5 cut(s) 112, 160, 386, 418, 784
BseRI GAGGAG 3 cut(s) 267, 1636, 1946
BseSI GKGCMC 1 cut(s) 421
BseXI GCAGC 5 cut(s) 522, 565, 715, 829, 1585
BsgI GTGCAG 3 cut(s) 347, 1169, 1887
Bsh1236I CGCG 1 cut(s) 1071
Bsh1285I CGRYCG 2 cut(s) 307, 1327
BshFI GGCC 5 cut(s) 112, 623, 928, 1509, 1862
BshNI GGYRCC 2 cut(s) 416, 890
BshVI ATCGAT 1 cut(s) 123
BsiEI CGRYCG 2 cut(s) 307, 1327
BsiSI CCGG 1 cut(s) 56
BslFI GGGAC 4 cut(s) 43, 113, 989, 1271
BslI CCNNNNNNNGG 4 cut(s) 212, 505, 1175, 1671
BsmAI GTCTC 6 cut(s) 213, 765, 909, 1359, 1969, 2036
BsmBI CGTCTC 2 cut(s) 765, 2036
BsmFI GGGAC 4 cut(s) 43, 113, 989, 1271
BsnI GGCC 5 cut(s) 112, 623, 928, 1509, 1862
Bso31I GGTCTC 1 cut(s) 213
Bsp1286I GDGCHC 2 cut(s) 421, 717
Bsp13I TCCGGA 1 cut(s) 55
BspACI CCGC 2 cut(s) 582, 1069
BspANI GGCC 5 cut(s) 112, 623, 928, 1509, 1862
BspCNI CTCAG 3 cut(s) 292, 312, 1146
BspDI ATCGAT 1 cut(s) 123
BspEI TCCGGA 1 cut(s) 55
BspFNI CGCG 1 cut(s) 1071
BspHI TCATGA 1 cut(s) 262
BspLI GGNNCC 5 cut(s) 54, 418, 530, 892, 929
BspMI ACCTGC 1 cut(s) 79
BspOI GCTAGC 2 cut(s) 878, 1569
BspPI GGATC 5 cut(s) 47, 60, 631, 640, 1712
BspQI GCTCTTC 3 cut(s) 536, 568, 852
BspT107I GGYRCC 2 cut(s) 416, 890
BspTI CTTAAG 1 cut(s) 1403
BspTNI GGTCTC 1 cut(s) 213
BsrDI GCAATG 2 cut(s) 500, 2054
BsrI ACTGG 5 cut(s) 112, 160, 386, 418, 784
BssECI CCNNGG 2 cut(s) 624, 1504
BssNAI GTATAC 1 cut(s) 1539
BssT1I CCWWGG 2 cut(s) 624, 1504
Bst1107I GTATAC 1 cut(s) 1539
Bst2UI CCWGG 2 cut(s) 1778, 1812
Bst4CI ACNGT 7 cut(s) 34, 243, 320, 512, 1328, 1609, 2081
Bst6I CTCTTC 3 cut(s) 536, 568, 852
BstAFI CTTAAG 1 cut(s) 1403
BstBAI YACGTR 1 cut(s) 1820
BstC8I GCNNGC 3 cut(s) 814, 876, 1567
BstDEI CTNAG 7 cut(s) 279, 299, 688, 923, 1133, 1533, 1700
BstF5I GGATG 6 cut(s) 64, 153, 1026, 1030, 1396, 1724
BstFNI CGCG 1 cut(s) 1071
BstH2I RGCGCY 1 cut(s) 989
BstHHI GCGC 1 cut(s) 988
BstMAI GTCTC 6 cut(s) 213, 765, 909, 1359, 1969, 2036
BstMCI CGRYCG 2 cut(s) 307, 1327
BstMWI GCNNNNNNNGC 3 cut(s) 620, 875, 1455
BstNI CCWGG 2 cut(s) 1778, 1812
BstNSI RCATGY 2 cut(s) 239, 1008
BstSCI CCNGG 2 cut(s) 1776, 1810
BstSFI CTRYAG 2 cut(s) 144, 663
BstSLI GKGCMC 1 cut(s) 421
BstUI CGCG 1 cut(s) 1071
BstV1I GCAGC 5 cut(s) 522, 565, 715, 829, 1585
BstV2I GAAGAC 3 cut(s) 246, 1496, 2027
BstX2I RGATCY 4 cut(s) 52, 209, 636, 645
BstXI CCANNNNNNTGG 1 cut(s) 724
BstYI RGATCY 4 cut(s) 52, 209, 636, 645
BstZ17I GTATAC 1 cut(s) 1539
Bsu15I ATCGAT 1 cut(s) 123
Bsu36I CCTNAGG 1 cut(s) 923
BsuI GTATCC 1 cut(s) 105
BsuRI GGCC 5 cut(s) 112, 623, 928, 1509, 1862
BsuTUI ATCGAT 1 cut(s) 123
BtgZI GCGATG 4 cut(s) 164, 1063, 1369, 1877
BtsCI GGATG 6 cut(s) 64, 153, 1026, 1030, 1396, 1724
BtsI GCAGTG 3 cut(s) 335, 343, 1181
BtsIMutI CAGTG 5 cut(s) 167, 330, 335, 343, 1181
BveI ACCTGC 1 cut(s) 79
Cac8I GCNNGC 3 cut(s) 814, 876, 1567
CaiI CAGNNNCTG 1 cut(s) 538
CciI TCATGA 1 cut(s) 262
CfoI GCGC 1 cut(s) 988
Cfr13I GGNCC 6 cut(s) 110, 480, 927, 1178, 1393, 1508
ClaI ATCGAT 1 cut(s) 123
Csp6I GTAC 6 cut(s) 176, 239, 411, 883, 1472, 1761
CviAII CATG 6 cut(s) 170, 236, 263, 641, 870, 1005
CviQI GTAC 6 cut(s) 176, 239, 411, 883, 1472, 1761
DdeI CTNAG 7 cut(s) 279, 299, 688, 923, 1133, 1533, 1700
DriI GACNNNNNGTC 1 cut(s) 1843
Eam1104I CTCTTC 3 cut(s) 536, 568, 852
Eam1105I GACNNNNNGTC 1 cut(s) 1843
EarI CTCTTC 3 cut(s) 536, 568, 852
Eco130I CCWWGG 2 cut(s) 624, 1504
Eco24I GRGCYC 1 cut(s) 717
Eco31I GGTCTC 1 cut(s) 213
Eco32I GATATC 1 cut(s) 1585
Eco47I GGWCC 3 cut(s) 480, 1178, 1393
Eco57I CTGAAG 2 cut(s) 269, 560
Eco81I CCTNAGG 1 cut(s) 923
EcoO109I RGGNCCY 1 cut(s) 927
EcoRII CCWGG 2 cut(s) 1776, 1810
EcoRV GATATC 1 cut(s) 1585
EcoT14I CCWWGG 2 cut(s) 624, 1504
EcoT22I ATGCAT 3 cut(s) 871, 1006, 1030
EcoT38I GRGCYC 1 cut(s) 717
ErhI CCWWGG 2 cut(s) 624, 1504
Esp3I CGTCTC 2 cut(s) 765, 2036
FaeI CATG 6 cut(s) 173, 239, 266, 644, 873, 1008
FaqI GGGAC 4 cut(s) 43, 113, 989, 1271
FatI CATG 6 cut(s) 169, 235, 262, 640, 869, 1004
FbaI TGATCA 3 cut(s) 265, 1059, 1888
FblI GTMKAC 2 cut(s) 1344, 1538
Fnu4HI GCNGC 6 cut(s) 536, 579, 582, 729, 843, 1599
FokI GGATG 6 cut(s) 71, 140, 1033, 1037, 1383, 1711
FriOI GRGCYC 1 cut(s) 717
Fsp4HI GCNGC 6 cut(s) 536, 579, 582, 729, 843, 1599
GlaI GCGC 1 cut(s) 987
GluI GCNGC 6 cut(s) 536, 579, 582, 729, 843, 1599
GsuI CTGGAG 2 cut(s) 143, 1794
HaeII RGCGCY 1 cut(s) 989
HaeIII GGCC 5 cut(s) 112, 623, 928, 1509, 1862
HapII CCGG 1 cut(s) 56
HhaI GCGC 1 cut(s) 988
Hin1II CATG 6 cut(s) 173, 239, 266, 644, 873, 1008
Hin6I GCGC 1 cut(s) 986
HinP1I GCGC 1 cut(s) 986
HincII GTYRAC 5 cut(s) 105, 203, 1345, 1592, 1755
HindII GTYRAC 5 cut(s) 105, 203, 1345, 1592, 1755
HindIII AAGCTT 2 cut(s) 607, 1997
HpaII CCGG 1 cut(s) 56
HphI GGTGA 3 cut(s) 28, 713, 1213
Hpy188I TCNGA 8 cut(s) 270, 282, 490, 572, 650, 1048, 1136, 1849
Hpy188III TCNNGA 8 cut(s) 22, 56, 263, 795, 1298, 1352, 1559, 1580
Hpy99I CGWCG 2 cut(s) 429, 1152
HpyAV CCTTC 4 cut(s) 613, 1121, 1428, 1731
HpyCH4III ACNGT 7 cut(s) 34, 243, 320, 512, 1328, 1609, 2081
HpyCH4IV ACGT 4 cut(s) 1218, 1284, 1819, 1828
HpyF10VI GCNNNNNNNGC 3 cut(s) 620, 875, 1455
HpyF3I CTNAG 7 cut(s) 279, 299, 688, 923, 1133, 1533, 1700
HpySE526I ACGT 4 cut(s) 1218, 1284, 1819, 1828
Hsp92II CATG 6 cut(s) 173, 239, 266, 644, 873, 1008
HspAI GCGC 1 cut(s) 986
Kpn2I TCCGGA 1 cut(s) 55
Ksp22I TGATCA 3 cut(s) 265, 1059, 1888
LguI GCTCTTC 3 cut(s) 536, 568, 852
LmnI GCTCC 5 cut(s) 333, 469, 1446, 1933, 1948
Lsp1109I GCAGC 5 cut(s) 522, 565, 715, 829, 1585
LweI GCATC 3 cut(s) 268, 1015, 1552
MaeII ACGT 4 cut(s) 1218, 1284, 1819, 1828
MaeIII GTNAC 5 cut(s) 34, 822, 830, 1007, 1219
MflI RGATCY 4 cut(s) 52, 209, 636, 645
MhlI GDGCHC 2 cut(s) 421, 717
MluCI AATT 6 cut(s) 953, 1620, 1851, 1869, 1922, 1943
MlyI GAGTC 8 cut(s) 160, 277, 576, 971, 1186, 1361, 1853, 2017
MmeI TCCRAC 1 cut(s) 673
Mph1103I ATGCAT 3 cut(s) 871, 1006, 1030
MroI TCCGGA 1 cut(s) 55
MseI TTAA 4 cut(s) 12, 1404, 1479, 1925
MslI CAYNNNNRTG 1 cut(s) 1248
MspA1I CMGCKG 1 cut(s) 535
MspCI CTTAAG 1 cut(s) 1403
MspI CCGG 1 cut(s) 56
MspR9I CCNGG 2 cut(s) 1778, 1812
MvaI CCWGG 2 cut(s) 1778, 1812
MvnI CGCG 1 cut(s) 1071
MwoI GCNNNNNNNGC 3 cut(s) 620, 875, 1455
NheI GCTAGC 2 cut(s) 874, 1565
NlaIII CATG 6 cut(s) 173, 239, 266, 644, 873, 1008
NlaIV GGNNCC 5 cut(s) 54, 418, 530, 892, 929
NmeAIII GCCGAG 1 cut(s) 818
NmuCI GTSAC 4 cut(s) 34, 822, 1007, 1219
NsiI ATGCAT 3 cut(s) 871, 1006, 1030
NspI RCATGY 2 cut(s) 239, 1008
PagI TCATGA 1 cut(s) 262
PaqCI CACCTGC 1 cut(s) 79
PciSI GCTCTTC 3 cut(s) 536, 568, 852
PcsI WCGNNNNNNNCGW 2 cut(s) 1585, 1825
PfeI GAWTC 3 cut(s) 787, 1255, 1376
PflMI CCANNNNNTGG 1 cut(s) 212
PkrI GCNGC 6 cut(s) 537, 580, 583, 730, 844, 1600
Ple19I CGATCG 1 cut(s) 307
PleI GAGTC 8 cut(s) 160, 277, 575, 971, 1186, 1361, 1852, 2017
PpsI GAGTC 8 cut(s) 160, 277, 575, 971, 1186, 1361, 1852, 2017
Ppu21I YACGTR 1 cut(s) 1820
Psp6I CCWGG 2 cut(s) 1776, 1810
PspGI CCWGG 2 cut(s) 1776, 1810
PspN4I GGNNCC 5 cut(s) 54, 418, 530, 892, 929
PspPI GGNCC 6 cut(s) 110, 480, 927, 1178, 1393, 1508
PstNI CAGNNNCTG 1 cut(s) 538
PsuI RGATCY 4 cut(s) 52, 209, 636, 645
PvuI CGATCG 1 cut(s) 307
PvuII CAGCTG 1 cut(s) 535
RsaI GTAC 6 cut(s) 177, 240, 412, 884, 1473, 1762
RsaNI GTAC 6 cut(s) 176, 239, 411, 883, 1472, 1761
RseI CAYNNNNRTG 1 cut(s) 1248
SalI GTCGAC 1 cut(s) 1343
SapI GCTCTTC 3 cut(s) 536, 568, 852
SaqAI TTAA 4 cut(s) 12, 1404, 1479, 1925
SatI GCNGC 6 cut(s) 536, 579, 582, 729, 843, 1599
Sau96I GGNCC 6 cut(s) 110, 480, 927, 1178, 1393, 1508
ScaI AGTACT 3 cut(s) 412, 884, 1762
SchI GAGTC 8 cut(s) 160, 277, 576, 971, 1186, 1361, 1853, 2017
ScrFI CCNGG 2 cut(s) 1778, 1812
SduI GDGCHC 2 cut(s) 421, 717
SfaNI GCATC 3 cut(s) 268, 1015, 1552
SfcI CTRYAG 2 cut(s) 144, 663
SinI GGWCC 3 cut(s) 480, 1178, 1393
SmiMI CAYNNNNRTG 1 cut(s) 1248
SmlI CTYRAG 5 cut(s) 47, 114, 1403, 1907, 2039
SmoI CTYRAG 5 cut(s) 47, 114, 1403, 1907, 2039
SpeI ACTAGT 2 cut(s) 1172, 1757
Sse9I AATT 6 cut(s) 953, 1620, 1851, 1869, 1922, 1943
SsiI CCGC 2 cut(s) 582, 1069
StyD4I CCNGG 2 cut(s) 1776, 1810
StyI CCWWGG 2 cut(s) 624, 1504
TaaI ACNGT 7 cut(s) 34, 243, 320, 512, 1328, 1609, 2081
TaiI ACGT 4 cut(s) 1221, 1287, 1822, 1831
TaqI TCGA 5 cut(s) 42, 123, 1114, 1344, 2004
TasI AATT 6 cut(s) 953, 1620, 1851, 1869, 1922, 1943
TatI WGTACW 4 cut(s) 238, 410, 882, 1760
TauI GCSGC 1 cut(s) 584
TfiI GAWTC 3 cut(s) 787, 1255, 1376
Tru1I TTAA 4 cut(s) 12, 1404, 1479, 1925
Tru9I TTAA 4 cut(s) 12, 1404, 1479, 1925
TscAI CASTG 5 cut(s) 167, 330, 335, 343, 1188
TseFI GTSAC 4 cut(s) 34, 822, 1007, 1219
TseI GCWGC 5 cut(s) 535, 578, 728, 842, 1598
Tsp45I GTSAC 4 cut(s) 34, 822, 1007, 1219
TspDTI ATGAA 3 cut(s) 1084, 1652, 1713
TspGWI ACGGA 2 cut(s) 1577, 1717
TspRI CASTG 5 cut(s) 167, 330, 335, 343, 1188
Van91I CCANNNNNTGG 1 cut(s) 212
Vha464I CTTAAG 1 cut(s) 1403
VpaK11BI GGWCC 3 cut(s) 480, 1178, 1393
XapI RAATTY 1 cut(s) 953
XbaI TCTAGA 1 cut(s) 1351
XceI RCATGY 2 cut(s) 239, 1008
XcmI CCANNNNNNNNNTGG 1 cut(s) 445
XmiI GTMKAC 2 cut(s) 1344, 1538
ZrmI AGTACT 3 cut(s) 412, 884, 1762
Zsp2I ATGCAT 3 cut(s) 871, 1006, 1030
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.