Rmu_ssc0000259.1_g000061

Galactose oxidase, central domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000259.1
OG0000179
Physical Location & Seq
Reverse (-)
254506 .. 256118
1613 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000259.1_g000061.1.cds

Sequence Viewer

Length: 1440 bp
atgaacaccaagtgcgcggtaacgttgccgatcaagagtgttatcgcggagtacatggttactcgagactatgtcgattggtggtctaacgtgtaccattctacaccagtgaaggcaacgaaagaagcgcctactagtagaccactgcacaagactctgaaagcaaaagaagataagaatgtcacctgtgaaacacggccttatcacaaaaacgtgattccttgtgaagttgaatgtagcaccaacgtccctgtgcctcctgatagggctttgctcccagatagcgaccttcaagctcatccgattgacattctagaagatgatggagactctttagattctcacgtcactttggtgcatccacttaagctgaaaagacccgcaatccaagaaagaaggcgtagtgggagcagtagtagcaacaatagtgaagtgcactttaagagtcggaaaactgacaccagtcttggccctacttattgcgatctcaatgctgagtatactctgaataccgactttcttggagacattccaacttcttcacaaccgatgttgcaacgtaatgagggtgcagagattgacggtcatccactttgggggaacaatgacgcctcttcagaccctatacgtgttccttttggagcggaacttgaggcttactctttacccactaaaggaacatccactgcaaagaatgactcacagcaagttgaccctacaggtccaatcaccaagatgcatcctcccaagcctctgaacaccataaccttttcagaggcctctcttggtggagctgctattatagatgctagtaaaagacttcgtgatattcgtcaacaagctgctacagcagtttgtgaacaaattgaggatatgataatgaagcactcctcaaacaccattctttccagcaaggggaaacttgacaagctgatagctgagcttagccattatgggattgatccttcatccgtaagggataaagttgagggattgttgactagtgctgaccaatacaacctggcacggctttcttgttcatgcaaggctactccaggcacacgttatcaatgtctggctgacacaaagtcagaaattgcaaaggccacttcaattcatcatgttgactctgatcatcgccaatatgcactcaagtctttggagaaattaaaggaggagcagcgaaaattggagcaaatagtgactttactagacgagagacttctactacaggagaagaagcttgtcgacctacaaaaagagaagactcaaatccaagagacccctgaggtaaccactgtagagcttgagacgacaaaattattgcgagatatttttgagagccactggaatagctttaagggtttgacttgggtgggaagagctattctccacttcgtagtctatgatgattttttcactttcctttattacttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko04212 ko05168 map04212 map05168
Pfam Domains
Protein Families
Kelch_3 Kelch_4 Kelch_5

Protein Analysis

479

Amino Acids

53.7

Weight (kDa)

6.0

Isoelectric Point (pI)

39.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 644
AccI GTMKAC 3 cut(s) 139, 500, 1248
AccII CGCG 2 cut(s) 17, 47
AciI CCGC 4 cut(s) 17, 47, 381, 644
AclI AACGTT 1 cut(s) 23
AclWI GGATC 1 cut(s) 956
AcuI CTGAAG 1 cut(s) 600
AcyI GRCGYC 1 cut(s) 609
AdeI CACNNNGTG 1 cut(s) 12
AfaI GTAC 2 cut(s) 53, 95
AfiI CCNNNNNNNGG 3 cut(s) 596, 674, 915
AflII CTTAAG 1 cut(s) 365
AflIII ACRYGT 3 cut(s) 90, 628, 1061
AgsI TTSAA 3 cut(s) 233, 293, 1113
AhdI GACNNNNNGTC 1 cut(s) 1087
AhlI ACTAGT 2 cut(s) 134, 1001
AjiI CACGTC 1 cut(s) 346
AjnI CCWGG 2 cut(s) 1020, 1054
AleI CACNNNNGTG 1 cut(s) 353
Alw21I GWGCWC 1 cut(s) 438
Alw26I GTCTC 6 cut(s) 60, 321, 519, 1213, 1274, 1304
Alw44I GTGCAC 1 cut(s) 434
AlwI GGATC 1 cut(s) 956
Ama87I CYCGRG 1 cut(s) 63
AoxI GGCC 4 cut(s) 197, 469, 777, 1104
ApaLI GTGCAC 1 cut(s) 434
ApeKI GCWGC 3 cut(s) 794, 842, 1180
AspLEI GCGC 2 cut(s) 17, 130
AspS9I GGNCC 2 cut(s) 470, 722
AsuHPI GGTGA 2 cut(s) 175, 721
AvaI CYCGRG 1 cut(s) 63
AvaII GGWCC 1 cut(s) 722
AxyI CCTNAGG 1 cut(s) 1287
BaeGI GKGCMC 1 cut(s) 438
BbsI GAAGAC 1 cut(s) 1271
Bbv12I GWGCWC 1 cut(s) 438
BbvI GCAGC 3 cut(s) 781, 829, 1192
BccI CCATC 1 cut(s) 317
BceAI ACGGC 2 cut(s) 212, 1043
BcgI CGANNNNNNTGC 2 cut(s) 473, 507
BciT130I CCWGG 2 cut(s) 1022, 1056
BclI TGATCA 1 cut(s) 1132
BcoDI GTCTC 6 cut(s) 60, 321, 519, 1213, 1274, 1304
BcuI ACTAGT 2 cut(s) 134, 1001
BfaI CTAG 5 cut(s) 135, 314, 810, 1002, 1211
BfmI CTRYAG 4 cut(s) 717, 846, 1229, 1299
BfoI RGCGCY 1 cut(s) 131
BfrI CTTAAG 1 cut(s) 365
BisI GCNGC 3 cut(s) 795, 843, 1181
BlpI GCTNAGC 2 cut(s) 939, 944
BlsI GCNGC 3 cut(s) 796, 844, 1182
Bme1390I CCNGG 2 cut(s) 1022, 1056
Bme18I GGWCC 1 cut(s) 722
BmeRI GACNNNNNGTC 1 cut(s) 1087
BmeT110I CYCGRG 1 cut(s) 63
BmgBI CACGTC 1 cut(s) 346
BmgT120I GGNCC 2 cut(s) 470, 722
BmrFI CCNGG 2 cut(s) 1022, 1056
BmsI GCATC 4 cut(s) 367, 726, 748, 796
BoxI GACNNNNGTC 1 cut(s) 462
BpiI GAAGAC 1 cut(s) 1271
BplI GAGNNNNNCTC 4 cut(s) 644, 676, 1374, 1406
BpmI CTGGAG 1 cut(s) 1038
Bpu1102I GCTNAGC 2 cut(s) 939, 944
BpuEI CTTGAG 3 cut(s) 671, 1136, 1328
BsaAI YACGTR 1 cut(s) 629
BsaHI GRCGYC 1 cut(s) 609
BsaI GGTCTC 1 cut(s) 1274
BsaXI ACNNNNNCTCC 2 cut(s) 400, 430
Bsc4I CCNNNNNNNGG 3 cut(s) 596, 674, 915
Bse1I ACTGG 3 cut(s) 107, 462, 1352
Bse21I CCTNAGG 1 cut(s) 1287
BseBI CCWGG 2 cut(s) 1022, 1056
BseGI GGATG 6 cut(s) 298, 358, 586, 680, 739, 968
BseLI CCNNNNNNNGG 3 cut(s) 596, 674, 915
BseMII CTCAG 3 cut(s) 486, 930, 1278
BseNI ACTGG 3 cut(s) 107, 462, 1352
BseRI GAGGAG 2 cut(s) 880, 1190
BseSI GKGCMC 1 cut(s) 438
BseXI GCAGC 3 cut(s) 781, 829, 1192
BsgI GTGCAG 2 cut(s) 131, 591
Bsh1236I CGCG 2 cut(s) 17, 47
BshFI GGCC 4 cut(s) 199, 471, 779, 1106
BsiHKAI GWGCWC 1 cut(s) 438
BsiHKCI CYCGRG 1 cut(s) 63
BslFI GGGAC 1 cut(s) 233
BslI CCNNNNNNNGG 3 cut(s) 596, 674, 915
BsmAI GTCTC 6 cut(s) 60, 321, 519, 1213, 1274, 1304
BsmBI CGTCTC 1 cut(s) 1304
BsmFI GGGAC 1 cut(s) 233
BsnI GGCC 4 cut(s) 199, 471, 779, 1106
Bso31I GGTCTC 1 cut(s) 1274
BsoBI CYCGRG 1 cut(s) 63
Bsp1286I GDGCHC 1 cut(s) 438
Bsp143I GATC 4 cut(s) 30, 484, 961, 1132
Bsp1720I GCTNAGC 2 cut(s) 939, 944
BspACI CCGC 4 cut(s) 17, 47, 381, 644
BspANI GGCC 4 cut(s) 199, 471, 779, 1106
BspCNI CTCAG 3 cut(s) 487, 931, 1279
BspFNI CGCG 2 cut(s) 17, 47
BspPI GGATC 1 cut(s) 956
BspQI GCTCTTC 1 cut(s) 1375
BspTI CTTAAG 1 cut(s) 365
BspTNI GGTCTC 1 cut(s) 1274
BsrBI CCGCTC 1 cut(s) 644
BsrI ACTGG 3 cut(s) 107, 462, 1352
BssMI GATC 4 cut(s) 30, 484, 961, 1132
BssNAI GTATAC 1 cut(s) 501
BssNI GRCGYC 1 cut(s) 609
Bst1107I GTATAC 1 cut(s) 501
Bst2UI CCWGG 2 cut(s) 1022, 1056
Bst4CI ACNGT 2 cut(s) 584, 1300
Bst6I CTCTTC 2 cut(s) 619, 1375
BstACI GRCGYC 1 cut(s) 609
BstAFI CTTAAG 1 cut(s) 365
BstBAI YACGTR 1 cut(s) 629
BstDEI CTNAG 4 cut(s) 495, 939, 944, 1287
BstEII GGTNACC 1 cut(s) 1291
BstF5I GGATG 6 cut(s) 298, 358, 586, 680, 739, 968
BstFNI CGCG 2 cut(s) 17, 47
BstH2I RGCGCY 1 cut(s) 131
BstHHI GCGC 2 cut(s) 17, 130
BstKTI GATC 4 cut(s) 33, 487, 964, 1135
BstMAI GTCTC 6 cut(s) 60, 321, 519, 1213, 1274, 1304
BstMBI GATC 4 cut(s) 30, 484, 961, 1132
BstMWI GCNNNNNNNGC 2 cut(s) 417, 848
BstNI CCWGG 2 cut(s) 1022, 1056
BstPAI GACNNNNGTC 1 cut(s) 462
BstPI GGTNACC 1 cut(s) 1291
BstSCI CCNGG 2 cut(s) 1020, 1054
BstSFI CTRYAG 4 cut(s) 717, 846, 1229, 1299
BstSLI GKGCMC 1 cut(s) 438
BstUI CGCG 2 cut(s) 17, 47
BstV1I GCAGC 3 cut(s) 781, 829, 1192
BstV2I GAAGAC 1 cut(s) 1271
BstZ17I GTATAC 1 cut(s) 501
Bsu36I CCTNAGG 1 cut(s) 1287
BsuRI GGCC 4 cut(s) 199, 471, 779, 1106
BtgZI GCGATG 1 cut(s) 1121
BtrI CACGTC 1 cut(s) 346
BtsCI GGATG 6 cut(s) 298, 358, 586, 680, 739, 968
BtsI GCAGTG 2 cut(s) 143, 684
BtsIMutI CAGTG 5 cut(s) 114, 143, 684, 1296, 1345
CfoI GCGC 2 cut(s) 17, 130
Cfr13I GGNCC 2 cut(s) 470, 722
CseI GACGC 1 cut(s) 617
Csp6I GTAC 2 cut(s) 52, 94
CviAII CATG 3 cut(s) 55, 1041, 1121
CviQI GTAC 2 cut(s) 52, 94
DdeI CTNAG 4 cut(s) 495, 939, 944, 1287
DpnI GATC 4 cut(s) 32, 486, 963, 1134
DpnII GATC 4 cut(s) 30, 484, 961, 1132
DraIII CACNNNGTG 1 cut(s) 12
DriI GACNNNNNGTC 1 cut(s) 1087
Eam1104I CTCTTC 2 cut(s) 619, 1375
Eam1105I GACNNNNNGTC 1 cut(s) 1087
EarI CTCTTC 2 cut(s) 619, 1375
Eco147I AGGCCT 1 cut(s) 779
Eco31I GGTCTC 1 cut(s) 1274
Eco47I GGWCC 1 cut(s) 722
Eco57I CTGAAG 1 cut(s) 600
Eco81I CCTNAGG 1 cut(s) 1287
Eco88I CYCGRG 1 cut(s) 63
Eco91I GGTNACC 1 cut(s) 1291
EcoO65I GGTNACC 1 cut(s) 1291
EcoRII CCWGG 2 cut(s) 1020, 1054
EcoT22I ATGCAT 1 cut(s) 741
Esp3I CGTCTC 1 cut(s) 1304
FaeI CATG 3 cut(s) 58, 1044, 1124
FaqI GGGAC 1 cut(s) 233
FatI CATG 3 cut(s) 54, 1040, 1120
FauI CCCGC 1 cut(s) 388
FbaI TGATCA 1 cut(s) 1132
FblI GTMKAC 3 cut(s) 139, 500, 1248
Fnu4HI GCNGC 3 cut(s) 795, 843, 1181
FokI GGATG 6 cut(s) 285, 345, 573, 667, 726, 955
Fsp4HI GCNGC 3 cut(s) 795, 843, 1181
FspBI CTAG 5 cut(s) 135, 314, 810, 1002, 1211
GlaI GCGC 2 cut(s) 16, 129
GluI GCNGC 3 cut(s) 795, 843, 1181
GsuI CTGGAG 1 cut(s) 1038
HaeII RGCGCY 1 cut(s) 131
HaeIII GGCC 4 cut(s) 199, 471, 779, 1106
HgaI GACGC 1 cut(s) 617
HhaI GCGC 2 cut(s) 17, 130
Hin1I GRCGYC 1 cut(s) 609
Hin1II CATG 3 cut(s) 58, 1044, 1124
Hin6I GCGC 2 cut(s) 15, 128
HinP1I GCGC 2 cut(s) 15, 128
HincII GTYRAC 5 cut(s) 712, 836, 999, 1126, 1249
HindII GTYRAC 5 cut(s) 712, 836, 999, 1126, 1249
HindIII AAGCTT 1 cut(s) 1241
HinfI GANTC 8 cut(s) 154, 217, 329, 338, 445, 698, 1127, 1267
HphI GGTGA 2 cut(s) 175, 721
Hpy188I TCNGA 9 cut(s) 159, 303, 450, 507, 619, 756, 775, 1093, 1132
Hpy188III TCNNGA 5 cut(s) 34, 65, 260, 314, 824
HpyAV CCTTC 4 cut(s) 106, 299, 390, 975
HpyCH4III ACNGT 2 cut(s) 584, 1300
HpyCH4IV ACGT 8 cut(s) 23, 90, 213, 246, 345, 559, 628, 1063
HpyF10VI GCNNNNNNNGC 2 cut(s) 417, 848
HpyF3I CTNAG 4 cut(s) 495, 939, 944, 1287
HpySE526I ACGT 8 cut(s) 23, 90, 213, 246, 345, 559, 628, 1063
Hsp92I GRCGYC 1 cut(s) 609
Hsp92II CATG 3 cut(s) 58, 1044, 1124
HspAI GCGC 2 cut(s) 15, 128
Ksp22I TGATCA 1 cut(s) 1132
Kzo9I GATC 4 cut(s) 30, 484, 961, 1132
LguI GCTCTTC 1 cut(s) 1375
LmnI GCTCC 6 cut(s) 279, 408, 641, 791, 1177, 1192
Lsp1109I GCAGC 3 cut(s) 781, 829, 1192
LweI GCATC 4 cut(s) 367, 726, 748, 796
MaeI CTAG 5 cut(s) 135, 314, 810, 1002, 1211
MaeII ACGT 8 cut(s) 23, 90, 213, 246, 345, 559, 628, 1063
MaeIII GTNAC 6 cut(s) 19, 58, 181, 346, 1201, 1291
MalI GATC 4 cut(s) 32, 486, 963, 1134
MbiI CCGCTC 1 cut(s) 644
MboI GATC 4 cut(s) 30, 484, 961, 1132
MboII GAAGA 7 cut(s) 182, 329, 531, 606, 1249, 1276, 1392
MhlI GDGCHC 1 cut(s) 438
MluCI AATT 6 cut(s) 864, 1095, 1113, 1166, 1187, 1319
MlyI GAGTC 6 cut(s) 148, 323, 454, 692, 1121, 1261
MmeI TCCRAC 2 cut(s) 428, 557
Mph1103I ATGCAT 1 cut(s) 741
MseI TTAA 4 cut(s) 366, 441, 1169, 1359
MslI CAYNNNNRTG 2 cut(s) 353, 734
MspCI CTTAAG 1 cut(s) 365
MspR9I CCNGG 2 cut(s) 1022, 1056
MvaI CCWGG 2 cut(s) 1022, 1056
MvnI CGCG 2 cut(s) 17, 47
MwoI GCNNNNNNNGC 2 cut(s) 417, 848
NdeII GATC 4 cut(s) 30, 484, 961, 1132
NlaIII CATG 3 cut(s) 58, 1044, 1124
NmuCI GTSAC 3 cut(s) 181, 346, 1201
NsiI ATGCAT 1 cut(s) 741
OliI CACNNNNGTG 1 cut(s) 353
PaeR7I CTCGAG 1 cut(s) 63
PceI AGGCCT 1 cut(s) 779
PciSI GCTCTTC 1 cut(s) 1375
PcsI WCGNNNNNNNCGW 1 cut(s) 829
PfeI GAWTC 2 cut(s) 217, 338
PflFI GACNNNGTC 1 cut(s) 71
PkrI GCNGC 3 cut(s) 796, 844, 1182
PleI GAGTC 6 cut(s) 148, 323, 453, 692, 1121, 1261
PpsI GAGTC 6 cut(s) 148, 323, 453, 692, 1121, 1261
Ppu21I YACGTR 1 cut(s) 629
PshAI GACNNNNGTC 1 cut(s) 462
Psp1406I AACGTT 1 cut(s) 23
Psp6I CCWGG 2 cut(s) 1020, 1054
PspEI GGTNACC 1 cut(s) 1291
PspGI CCWGG 2 cut(s) 1020, 1054
PspPI GGNCC 2 cut(s) 470, 722
PsyI GACNNNGTC 1 cut(s) 71
RsaI GTAC 2 cut(s) 53, 95
RsaNI GTAC 2 cut(s) 52, 94
RseI CAYNNNNRTG 2 cut(s) 353, 734
SalI GTCGAC 1 cut(s) 1247
SapI GCTCTTC 1 cut(s) 1375
SaqAI TTAA 4 cut(s) 366, 441, 1169, 1359
SatI GCNGC 3 cut(s) 795, 843, 1181
Sau3AI GATC 4 cut(s) 30, 484, 961, 1132
Sau96I GGNCC 2 cut(s) 470, 722
SchI GAGTC 6 cut(s) 148, 323, 454, 692, 1121, 1261
ScrFI CCNGG 2 cut(s) 1022, 1056
SduI GDGCHC 1 cut(s) 438
SfaNI GCATC 4 cut(s) 367, 726, 748, 796
SfcI CTRYAG 4 cut(s) 717, 846, 1229, 1299
Sfr274I CTCGAG 1 cut(s) 63
SinI GGWCC 1 cut(s) 722
SlaI CTCGAG 1 cut(s) 63
SmiMI CAYNNNNRTG 2 cut(s) 353, 734
SmlI CTYRAG 5 cut(s) 63, 365, 650, 1151, 1307
SmoI CTYRAG 5 cut(s) 63, 365, 650, 1151, 1307
SpeI ACTAGT 2 cut(s) 134, 1001
Sse9I AATT 6 cut(s) 864, 1095, 1113, 1166, 1187, 1319
SseBI AGGCCT 1 cut(s) 779
SsiI CCGC 4 cut(s) 17, 47, 381, 644
SspMI CTAG 5 cut(s) 135, 314, 810, 1002, 1211
StuI AGGCCT 1 cut(s) 779
StyD4I CCNGG 2 cut(s) 1020, 1054
TaaI ACNGT 2 cut(s) 584, 1300
TaiI ACGT 8 cut(s) 26, 93, 216, 249, 348, 562, 631, 1066
TaqI TCGA 3 cut(s) 64, 75, 1248
TasI AATT 6 cut(s) 864, 1095, 1113, 1166, 1187, 1319
TatI WGTACW 1 cut(s) 51
TfiI GAWTC 2 cut(s) 217, 338
Tru1I TTAA 4 cut(s) 366, 441, 1169, 1359
Tru9I TTAA 4 cut(s) 366, 441, 1169, 1359
TscAI CASTG 5 cut(s) 114, 150, 691, 1303, 1352
TseFI GTSAC 3 cut(s) 181, 346, 1201
TseI GCWGC 3 cut(s) 794, 842, 1180
Tsp45I GTSAC 3 cut(s) 181, 346, 1201
TspDTI ATGAA 5 cut(s) 17, 896, 957, 1029, 1106
TspGWI ACGGA 1 cut(s) 961
TspRI CASTG 5 cut(s) 114, 150, 691, 1303, 1352
Tth111I GACNNNGTC 1 cut(s) 71
Vha464I CTTAAG 1 cut(s) 365
VneI GTGCAC 1 cut(s) 434
VpaK11BI GGWCC 1 cut(s) 722
XbaI TCTAGA 1 cut(s) 313
XhoI CTCGAG 1 cut(s) 63
XmiI GTMKAC 3 cut(s) 139, 500, 1248
XspI CTAG 5 cut(s) 135, 314, 810, 1002, 1211
Zsp2I ATGCAT 1 cut(s) 741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.