Rmu_sc0001346.1_g000006

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001346.1
OG0000179
Physical Location & Seq
Forward (+)
10375 .. 13077
2703 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001346.1_g000006.1.cds

Sequence Viewer

Length: 1434 bp
atgtccatctccctctgggatttggaccaactcggaggtttgcccattgctgggcggttttatgatgaggtggttccagctgctgaagagcttactgtagcaagcaaagggagtcaacagagctgccgctatttgtttctcgcctaccataagctttgcaaagaaggccaagggcagaagaatgtgtttaatccatctggcaggatctatgagatccgacaacgtacttctgcagacctcgcagtatttgatgacttaggcattgagagtgaagatgtagaacccacctatttggctgcctttcttgcttgttggttgtgtctatttgttttacccagagacgacattggtttgattcgtccgggagtattcaaagttgccagcaaaatgtcacagggtgtacagttttgcctagcagtaccagtgttggccaacatctatcagggtttaagcgagatttctgtttccagcgatcctgttgaatgtagcaccaacgtccctgcgcctcctaataggactttgcttcctagtagtgattgccagactcatctacccaacactctagatgatgatggggactctttagattctcacattgctttggctcatctacctaagttgaagagacctgccatcaaagaaagaaggcgtagtggaagcagcgcggaacttgaggcttacgctttacccacgaaaggaaaatccaatgcaaagaatgactcacagcaaattgactctacaggtccacttaccatggtgcatcctcctaagcctctgaacaccatagccttttctgaggcctctcttggtggagctgctattatagatgccagccaaagacttcgtgatatgataatgaacaagggggaacttaacaagctgatagctgagcttagccattatgggattgatccttcatccgtaaggggaaaagttgaaggattgttgactagtgctgaccaatacaacctggcacgactttcttgttcacgcaaggctactctaggcacacgtattcaatgtctagctgacacagagtcagaaattgcgaaggtcacttcaatttttcaagctgactctgatcattgtcaatctgcactcaagtctttaggcacacgtattcaatgtctggctgacacagagtcagaaattgcgaaggtcacttcaatttttcaagctgactctgatcattgtcaatctgcactcaagtctttggagaaattaaaggaggagcaacgaaaattggagcaaacaatgactttactagatgagagacttctactacaggagaagaagcttgtcgacctagaaaaagagaatgctcaaatccaagagacccccgaggtgaccactgcagagcttaagacgacaaaatcattacgagatacttttgagaaccaccgcaatagcttcaagggtttgacttgggtgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

477

Amino Acids

52.43

Weight (kDa)

5.46

Isoelectric Point (pI)

48.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 637
AccI GTMKAC 1 cut(s) 1302
AccII CGCG 1 cut(s) 665
AciI CCGC 4 cut(s) 55, 127, 665, 1402
AclWI GGATC 4 cut(s) 208, 212, 467, 905
AcoI YGGCCR 1 cut(s) 429
AcuI CTGAAG 1 cut(s) 105
AdeI CACNNNGTG 1 cut(s) 398
AfaI GTAC 3 cut(s) 226, 402, 420
AfiI CCNNNNNNNGG 3 cut(s) 50, 51, 695
AflII CTTAAG 1 cut(s) 1361
AflIII ACRYGT 2 cut(s) 1010, 1115
AhdI GACNNNNNGTC 2 cut(s) 1036, 1141
AhlI ACTAGT 1 cut(s) 950
AjnI CCWGG 1 cut(s) 969
Alw26I GTCTC 4 cut(s) 333, 619, 1267, 1328
AlwI GGATC 4 cut(s) 208, 212, 467, 905
AlwNI CAGNNNCTG 1 cut(s) 83
Ama87I CYCGRG 1 cut(s) 1340
AoxI GGCC 3 cut(s) 166, 429, 798
ApeKI GCWGC 5 cut(s) 80, 123, 296, 660, 815
AspLEI GCGC 2 cut(s) 505, 665
AspS9I GGNCC 2 cut(s) 25, 743
AsuC2I CCSGG 1 cut(s) 363
AsuHPI GGTGA 1 cut(s) 1357
AvaI CYCGRG 1 cut(s) 1340
AvaII GGWCC 2 cut(s) 25, 743
BalI TGGCCA 1 cut(s) 431
BbvI GCAGC 5 cut(s) 67, 110, 283, 672, 802
BccI CCATC 4 cut(s) 14, 202, 566, 641
BciT130I CCWGG 1 cut(s) 971
BclI TGATCA 2 cut(s) 1081, 1186
BcnI CCSGG 1 cut(s) 363
BcoDI GTCTC 4 cut(s) 333, 619, 1267, 1328
BcuI ACTAGT 1 cut(s) 950
BfaI CTAG 8 cut(s) 413, 528, 563, 951, 1004, 1025, 1265, 1307
BfmI CTRYAG 5 cut(s) 96, 231, 738, 1283, 1353
BfrI CTTAAG 1 cut(s) 1361
BfuAI ACCTGC 1 cut(s) 637
BisI GCNGC 6 cut(s) 81, 124, 127, 297, 661, 816
BlpI GCTNAGC 2 cut(s) 888, 893
BlsI GCNGC 6 cut(s) 82, 125, 128, 298, 662, 817
Bme1390I CCNGG 2 cut(s) 363, 971
Bme18I GGWCC 2 cut(s) 25, 743
BmeRI GACNNNNNGTC 2 cut(s) 1036, 1141
BmeT110I CYCGRG 1 cut(s) 1340
BmgT120I GGNCC 2 cut(s) 25, 743
BmiI GGNNCC 1 cut(s) 75
BmrFI CCNGG 2 cut(s) 363, 971
BmsI GCATC 2 cut(s) 769, 817
Bpu10I CCTNAGC 1 cut(s) 768
Bpu1102I GCTNAGC 2 cut(s) 888, 893
BpuEI CTTGAG 3 cut(s) 692, 1085, 1190
BpuMI CCSGG 1 cut(s) 363
BsaAI YACGTR 2 cut(s) 1013, 1118
BsaI GGTCTC 2 cut(s) 619, 1328
BsaJI CCNNGG 3 cut(s) 169, 753, 1341
Bsc4I CCNNNNNNNGG 3 cut(s) 50, 51, 695
Bse1I ACTGG 1 cut(s) 422
Bse3DI GCAATG 2 cut(s) 45, 594
BseBI CCWGG 1 cut(s) 971
BseDI CCNNGG 3 cut(s) 169, 753, 1341
BseGI GGATG 2 cut(s) 760, 917
BseLI CCNNNNNNNGG 3 cut(s) 50, 51, 695
BseMI GCAATG 2 cut(s) 45, 594
BseMII CTCAG 2 cut(s) 786, 879
BseNI ACTGG 1 cut(s) 422
BseRI GAGGAG 1 cut(s) 1244
BseXI GCAGC 5 cut(s) 67, 110, 283, 672, 802
BseYI CCCAGC 1 cut(s) 50
BsgI GTGCAG 2 cut(s) 1080, 1185
Bsh1236I CGCG 1 cut(s) 665
BshFI GGCC 3 cut(s) 168, 431, 800
BsiHKCI CYCGRG 1 cut(s) 1340
BsiSI CCGG 1 cut(s) 362
BslFI GGGAC 2 cut(s) 482, 590
BslI CCNNNNNNNGG 3 cut(s) 50, 51, 695
BsmAI GTCTC 4 cut(s) 333, 619, 1267, 1328
BsmBI CGTCTC 1 cut(s) 333
BsmFI GGGAC 2 cut(s) 482, 590
BsmI GAATGC 1 cut(s) 1324
BsnI GGCC 3 cut(s) 168, 431, 800
Bso31I GGTCTC 2 cut(s) 619, 1328
BsoBI CYCGRG 1 cut(s) 1340
Bsp1407I TGTACA 1 cut(s) 400
Bsp143I GATC 6 cut(s) 204, 213, 472, 910, 1081, 1186
Bsp1720I GCTNAGC 2 cut(s) 888, 893
Bsp19I CCATGG 1 cut(s) 753
BspACI CCGC 4 cut(s) 55, 127, 665, 1402
BspANI GGCC 3 cut(s) 168, 431, 800
BspCNI CTCAG 2 cut(s) 787, 880
BspFNI CGCG 1 cut(s) 665
BspLI GGNNCC 1 cut(s) 75
BspMAI CTGCAG 2 cut(s) 235, 1357
BspMI ACCTGC 1 cut(s) 637
BspPI GGATC 4 cut(s) 208, 212, 467, 905
BspQI GCTCTTC 1 cut(s) 81
BspTI CTTAAG 1 cut(s) 1361
BspTNI GGTCTC 2 cut(s) 619, 1328
BsrDI GCAATG 2 cut(s) 45, 594
BsrGI TGTACA 1 cut(s) 400
BsrI ACTGG 1 cut(s) 422
BssECI CCNNGG 3 cut(s) 169, 753, 1341
BssMI GATC 6 cut(s) 204, 213, 472, 910, 1081, 1186
BssT1I CCWWGG 2 cut(s) 169, 753
Bst2UI CCWGG 1 cut(s) 971
Bst4CI ACNGT 2 cut(s) 97, 405
Bst6I CTCTTC 2 cut(s) 81, 617
BstAFI CTTAAG 1 cut(s) 1361
BstAUI TGTACA 1 cut(s) 400
BstBAI YACGTR 2 cut(s) 1013, 1118
BstC8I GCNNGC 3 cut(s) 103, 382, 832
BstDEI CTNAG 6 cut(s) 256, 615, 768, 795, 888, 893
BstDSI CCRYGG 1 cut(s) 753
BstEII GGTNACC 1 cut(s) 1345
BstF5I GGATG 2 cut(s) 760, 917
BstFNI CGCG 1 cut(s) 665
BstHHI GCGC 2 cut(s) 505, 665
BstKTI GATC 6 cut(s) 207, 216, 475, 913, 1084, 1189
BstMAI GTCTC 4 cut(s) 333, 619, 1267, 1328
BstMBI GATC 6 cut(s) 204, 213, 472, 910, 1081, 1186
BstMWI GCNNNNNNNGC 3 cut(s) 165, 239, 305
BstNI CCWGG 1 cut(s) 971
BstPI GGTNACC 1 cut(s) 1345
BstSCI CCNGG 2 cut(s) 361, 969
BstSFI CTRYAG 5 cut(s) 96, 231, 738, 1283, 1353
BstUI CGCG 1 cut(s) 665
BstV1I GCAGC 5 cut(s) 67, 110, 283, 672, 802
BstX2I RGATCY 2 cut(s) 204, 213
BstXI CCANNNNNNTGG 1 cut(s) 292
BstYI RGATCY 2 cut(s) 204, 213
BsuRI GGCC 3 cut(s) 168, 431, 800
BtgI CCRYGG 1 cut(s) 753
BtsCI GGATG 2 cut(s) 760, 917
BtsI GCAGTG 1 cut(s) 1350
BtsIMutI CAGTG 2 cut(s) 429, 1350
BveI ACCTGC 1 cut(s) 637
Cac8I GCNNGC 3 cut(s) 103, 382, 832
CaiI CAGNNNCTG 1 cut(s) 83
CfoI GCGC 2 cut(s) 505, 665
Cfr13I GGNCC 2 cut(s) 25, 743
Csp6I GTAC 3 cut(s) 225, 401, 419
CviAII CATG 1 cut(s) 754
CviQI GTAC 3 cut(s) 225, 401, 419
DdeI CTNAG 6 cut(s) 256, 615, 768, 795, 888, 893
DpnI GATC 6 cut(s) 206, 215, 474, 912, 1083, 1188
DpnII GATC 6 cut(s) 204, 213, 472, 910, 1081, 1186
DraIII CACNNNGTG 1 cut(s) 398
DriI GACNNNNNGTC 2 cut(s) 1036, 1141
EaeI YGGCCR 1 cut(s) 429
Eam1104I CTCTTC 2 cut(s) 81, 617
Eam1105I GACNNNNNGTC 2 cut(s) 1036, 1141
EarI CTCTTC 2 cut(s) 81, 617
Eco130I CCWWGG 2 cut(s) 169, 753
Eco147I AGGCCT 1 cut(s) 800
Eco31I GGTCTC 2 cut(s) 619, 1328
Eco47I GGWCC 2 cut(s) 25, 743
Eco57I CTGAAG 1 cut(s) 105
Eco88I CYCGRG 1 cut(s) 1340
Eco91I GGTNACC 1 cut(s) 1345
EcoO65I GGTNACC 1 cut(s) 1345
EcoRII CCWGG 1 cut(s) 969
EcoT14I CCWWGG 2 cut(s) 169, 753
ErhI CCWWGG 2 cut(s) 169, 753
Esp3I CGTCTC 1 cut(s) 333
FaeI CATG 1 cut(s) 757
FaiI YATR 8 cut(s) 63, 150, 210, 755, 785, 824, 851, 903
FaqI GGGAC 2 cut(s) 482, 590
FatI CATG 1 cut(s) 753
FbaI TGATCA 2 cut(s) 1081, 1186
FblI GTMKAC 1 cut(s) 1302
Fnu4HI GCNGC 6 cut(s) 81, 124, 127, 297, 661, 816
FokI GGATG 2 cut(s) 747, 904
Fsp4HI GCNGC 6 cut(s) 81, 124, 127, 297, 661, 816
FspBI CTAG 8 cut(s) 413, 528, 563, 951, 1004, 1025, 1265, 1307
GlaI GCGC 2 cut(s) 504, 664
GluI GCNGC 6 cut(s) 81, 124, 127, 297, 661, 816
GsaI CCCAGC 1 cut(s) 54
HaeIII GGCC 3 cut(s) 168, 431, 800
HapII CCGG 1 cut(s) 362
HhaI GCGC 2 cut(s) 505, 665
Hin1II CATG 1 cut(s) 757
Hin6I GCGC 2 cut(s) 503, 663
HinP1I GCGC 2 cut(s) 503, 663
HincII GTYRAC 3 cut(s) 116, 948, 1303
HindII GTYRAC 3 cut(s) 116, 948, 1303
HindIII AAGCTT 2 cut(s) 152, 1295
HpaII CCGG 1 cut(s) 362
HphI GGTGA 1 cut(s) 1357
Hpy166II GTNNAC 6 cut(s) 116, 401, 746, 948, 989, 1303
Hpy188I TCNGA 8 cut(s) 35, 218, 777, 796, 1042, 1081, 1147, 1186
Hpy188III TCNNGA 2 cut(s) 563, 845
Hpy8I GTNNAC 6 cut(s) 116, 401, 746, 948, 989, 1303
HpyAV CCTTC 6 cut(s) 158, 639, 924, 932, 1045, 1150
HpyCH4III ACNGT 2 cut(s) 97, 405
HpyCH4IV ACGT 4 cut(s) 223, 495, 1012, 1117
HpyCH4V TGCA 7 cut(s) 159, 233, 710, 760, 1097, 1202, 1355
HpyF10VI GCNNNNNNNGC 3 cut(s) 165, 239, 305
HpyF3I CTNAG 6 cut(s) 256, 615, 768, 795, 888, 893
HpySE526I ACGT 4 cut(s) 223, 495, 1012, 1117
Hsp92II CATG 1 cut(s) 757
HspAI GCGC 2 cut(s) 503, 663
Ksp22I TGATCA 2 cut(s) 1081, 1186
Kzo9I GATC 6 cut(s) 204, 213, 472, 910, 1081, 1186
LguI GCTCTTC 1 cut(s) 81
LmnI GCTCC 3 cut(s) 812, 1231, 1246
Lsp1109I GCAGC 5 cut(s) 67, 110, 283, 672, 802
LweI GCATC 2 cut(s) 769, 817
MaeI CTAG 8 cut(s) 413, 528, 563, 951, 1004, 1025, 1265, 1307
MaeII ACGT 4 cut(s) 223, 495, 1012, 1117
MaeIII GTNAC 4 cut(s) 390, 1054, 1159, 1345
MalI GATC 6 cut(s) 206, 215, 474, 912, 1083, 1188
MboI GATC 6 cut(s) 204, 213, 472, 910, 1081, 1186
MboII GAAGA 5 cut(s) 98, 190, 284, 634, 1303
MflI RGATCY 2 cut(s) 204, 213
MlsI TGGCCA 1 cut(s) 431
MluCI AATT 7 cut(s) 729, 1044, 1062, 1149, 1167, 1220, 1241
MluNI TGGCCA 1 cut(s) 431
MlyI GAGTC 9 cut(s) 121, 538, 572, 713, 728, 1046, 1070, 1151, 1175
MmeI TCCRAC 1 cut(s) 241
Mox20I TGGCCA 1 cut(s) 431
MscI TGGCCA 1 cut(s) 431
MseI TTAA 5 cut(s) 189, 449, 873, 1223, 1362
Msp20I TGGCCA 1 cut(s) 431
MspA1I CMGCKG 1 cut(s) 80
MspCI CTTAAG 1 cut(s) 1361
MspI CCGG 1 cut(s) 362
MspR9I CCNGG 2 cut(s) 363, 971
Mva1269I GAATGC 1 cut(s) 1324
MvaI CCWGG 1 cut(s) 971
MvnI CGCG 1 cut(s) 665
MwoI GCNNNNNNNGC 3 cut(s) 165, 239, 305
NciI CCSGG 1 cut(s) 363
NcoI CCATGG 1 cut(s) 753
NdeII GATC 6 cut(s) 204, 213, 472, 910, 1081, 1186
NlaIII CATG 1 cut(s) 757
NlaIV GGNNCC 1 cut(s) 75
NmuCI GTSAC 4 cut(s) 390, 1054, 1159, 1345
PceI AGGCCT 1 cut(s) 800
PciSI GCTCTTC 1 cut(s) 81
PctI GAATGC 1 cut(s) 1324
PfeI GAWTC 2 cut(s) 355, 587
PfoI TCCNGGA 1 cut(s) 361
PkrI GCNGC 6 cut(s) 82, 125, 128, 298, 662, 817
PleI GAGTC 9 cut(s) 120, 538, 572, 713, 728, 1045, 1070, 1150, 1175
PpsI GAGTC 9 cut(s) 120, 538, 572, 713, 728, 1045, 1070, 1150, 1175
Ppu21I YACGTR 2 cut(s) 1013, 1118
Psp6I CCWGG 1 cut(s) 969
PspEI GGTNACC 1 cut(s) 1345
PspFI CCCAGC 1 cut(s) 50
PspGI CCWGG 1 cut(s) 969
PspN4I GGNNCC 1 cut(s) 75
PspPI GGNCC 2 cut(s) 25, 743
PstI CTGCAG 2 cut(s) 235, 1357
PstNI CAGNNNCTG 1 cut(s) 83
PsuI RGATCY 2 cut(s) 204, 213
PvuII CAGCTG 1 cut(s) 80
RsaI GTAC 3 cut(s) 226, 402, 420
RsaNI GTAC 3 cut(s) 225, 401, 419
SalI GTCGAC 1 cut(s) 1301
SapI GCTCTTC 1 cut(s) 81
SaqAI TTAA 5 cut(s) 189, 449, 873, 1223, 1362
SatI GCNGC 6 cut(s) 81, 124, 127, 297, 661, 816
Sau3AI GATC 6 cut(s) 204, 213, 472, 910, 1081, 1186
Sau96I GGNCC 2 cut(s) 25, 743
SchI GAGTC 9 cut(s) 121, 538, 572, 713, 728, 1046, 1070, 1151, 1175
ScrFI CCNGG 2 cut(s) 363, 971
SfaNI GCATC 2 cut(s) 769, 817
SfcI CTRYAG 5 cut(s) 96, 231, 738, 1283, 1353
SinI GGWCC 2 cut(s) 25, 743
SmlI CTYRAG 4 cut(s) 671, 1100, 1205, 1361
SmoI CTYRAG 4 cut(s) 671, 1100, 1205, 1361
SpeI ACTAGT 1 cut(s) 950
Sse9I AATT 7 cut(s) 729, 1044, 1062, 1149, 1167, 1220, 1241
SseBI AGGCCT 1 cut(s) 800
SsiI CCGC 4 cut(s) 55, 127, 665, 1402
SspMI CTAG 8 cut(s) 413, 528, 563, 951, 1004, 1025, 1265, 1307
StuI AGGCCT 1 cut(s) 800
StyD4I CCNGG 2 cut(s) 361, 969
StyI CCWWGG 2 cut(s) 169, 753
TaaI ACNGT 2 cut(s) 97, 405
TaiI ACGT 4 cut(s) 226, 498, 1015, 1120
TaqI TCGA 1 cut(s) 1302
TasI AATT 7 cut(s) 729, 1044, 1062, 1149, 1167, 1220, 1241
TatI WGTACW 1 cut(s) 400
TauI GCSGC 1 cut(s) 129
TfiI GAWTC 2 cut(s) 355, 587
Tru1I TTAA 5 cut(s) 189, 449, 873, 1223, 1362
Tru9I TTAA 5 cut(s) 189, 449, 873, 1223, 1362
TscAI CASTG 2 cut(s) 429, 1357
TseFI GTSAC 4 cut(s) 390, 1054, 1159, 1345
TseI GCWGC 5 cut(s) 80, 123, 296, 660, 815
Tsp45I GTSAC 4 cut(s) 390, 1054, 1159, 1345
TspDTI ATGAA 2 cut(s) 872, 906
TspGWI ACGGA 1 cut(s) 910
TspRI CASTG 2 cut(s) 429, 1357
Vha464I CTTAAG 1 cut(s) 1361
VpaK11BI GGWCC 2 cut(s) 25, 743
XbaI TCTAGA 1 cut(s) 562
XmiI GTMKAC 1 cut(s) 1302
XspI CTAG 8 cut(s) 413, 528, 563, 951, 1004, 1025, 1265, 1307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.