pycom07g27810

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0000179
Physical Location & Seq
Reverse (-)
27364478 .. 27366842
2365 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g27810.5

Sequence Viewer

Length: 1926 bp
ATGGTATTTTTCAAATGTTTTAAGAGCAACACCATCACCATTCTCGCGAAGGAAAATGATTCGCAAGATAGGGGAACAACGCTGAAGATTTACGCCCCACTGACTGGCCTGAAGGCGCTTGCTCTTCCTACAAAAGACAACTCCATGCATATTAAGTCGTGGTCTTCTGAAGTATCTTGGAAGGTGGCAGAAATGTTAACTAGCATTATTGTTCGATCAAATACGGAGAAGGAGGGGTGGACACCGGGGATTCTTATCTTGAACCCTTCGCACCATGCTCGTGACAATCATCCGGCTTCGTTTAAGCTTCTCGGAGATCACATCCGTAGCGGAGCTATGGCTTGGCATGATGCCTTGTCGACTACCGGAGAAGCTGTTTTTGATGAGTCTTATTGGGAGTGGCTTGAAGATGTCTTGGGCCGATCTAAACATGTGCTTACTAGCATGGGCCTTTACCATGCCGTGTACGCGTCTTTGTTTAGTTATGATCTCCATCATTCTGTCCTTCATGCGTTCTTCGAGCATTGGTGTTCAGCGACTAACACGCTTCATACAGCTCAAGGAGAGATGTCAATTTCACTTTGGGATCTCCACAAGATAGGGGGATTGCCAATCCAAGGTAAGTTTTATGACGAGGTCGTTCCTAGTGCGGAGGAACTTTCTTTCTGCAATAACCGAGGATTGCCTGCGAGTTGTCGCTGTTTATTTTGGGCATATCACAAGCTTTCCCAAGATGCTCGAAATAAATCAGGCGTGAAGATTTCTTCATGGATCCGCTTCTGGTATTGGGAGGACACAAGGTACAAGAAGTCCTCGAAGAGAAGAAGTTGCAACAAAACCACTAAGCCAAAGGGAGACTCATATCCATCTGGTGCCATTGGTTCAGCTAGGCGCCGTTCCCCTGCCGAGTTGAGAGCGTTTGAGGACCTTGGCATAGCATCAGAGCATTTTGTTTTTCCAATCGGCGACGTCAACTTTGTTCGTCCTGGGGTTTTCAAAGTTGCTAGCAAGATGGCTGCAGGTGAATCTTTCAGTCTTGCTATCCCGGTTTTGGCCAATATTTATAATGGCTTGAGTGTTGTTTCGAACTCAGCAAAGGCTGAAAGACGTATGCATCTTCTTCTCTCTTATGACTTCTTCTGCTTTCATTGTATTTATTCTTATACGGAGATGGTATTTGGAGGCGACCTACCTACAGGCGAGGAGATTGGGGATCCACCTGGTACAGAGCTTATCCCAAGTTCGTCAAGTTTCGCAAGTTTGCCGTGTGTAGGTGGAGGCATGCAAGATCCCGTCATGCGTTCTATACCTTTGCCAGCTAGCTCTGAGATCTCTCTGAGAGGGCCAAACCTTAGTGGTACTGAGCAGCTTATTCATCGCATCAATCTTCGTGCGGCAATGGATATCAAGAGCCATATTGAGGGGAGGATTTCGAAATGCCCGTCGGAGGACCTTGCGTTGCTTAAGGAGGACTTATCGAAACTTATTTCTGCAATTGACAATCTTAACATTGATTCTTCATCCTTAAAGATCAAAATTGCTGAAATTATGGCCGCCTCAACTGAGTATTCTTCCTTGCGTGTTATTTCCTTGAAGAAGTTGAGTCCAGATGTTAGAGCTCACCAACTTGATGCAATAGACTTGTCACTAACTCAGGCCCGGTCTTCTCAGCAAGCTGCTTCGGGAGATTATCAATCTACAGAGACTTCTTTAGCTTCCGTCCGAGTACGTCTAGATATGTTGATGCGAGAACAAGAACAACTGGGCAGCGAGGCATCAAAACTTGAAAGTGTTCTCGGGGAGCAGGGAGCTACACTTTCTCAATGCCAAGAGGAGATTTCACGCCTAGAACAAGAGAAAGACATGGCTATGGAGTTGCCCCCAGCGGTTGAGGTGAAGACTTTGAGTCGAAAGAGCCAGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

642

Amino Acids

71.08

Weight (kDa)

6.61

Isoelectric Point (pI)

53.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1065
AarI CACCTGC 1 cut(s) 1010
AatII GACGTC 1 cut(s) 972
Acc36I ACCTGC 1 cut(s) 1010
AccB1I GGYRCC 2 cut(s) 872, 891
AccB7I CCANNNNNTGG 1 cut(s) 104
AccI GTMKAC 1 cut(s) 359
AccII CGCG 2 cut(s) 47, 470
AciI CCGC 6 cut(s) 330, 650, 775, 1394, 1554, 1886
AclWI GGATC 6 cut(s) 594, 766, 779, 1208, 1221, 1283
AcoI YGGCCR 2 cut(s) 1053, 1551
AcuI CTGAAG 3 cut(s) 104, 131, 189
AcyI GRCGYC 2 cut(s) 892, 969
AfaI GTAC 5 cut(s) 467, 803, 1225, 1360, 1728
AfiI CCNNNNNNNGG 6 cut(s) 104, 617, 1051, 1271, 1420, 1447
AflII CTTAAG 1 cut(s) 1463
AflIII ACRYGT 2 cut(s) 430, 468
AgsI TTSAA 6 cut(s) 13, 262, 407, 997, 1594, 1787
AhdI GACNNNNNGTC 1 cut(s) 1905
AjnI CCWGG 2 cut(s) 985, 1219
Alw21I GWGCWC 1 cut(s) 1621
Alw26I GTCTC 2 cut(s) 849, 1697
AlwI GGATC 6 cut(s) 594, 766, 779, 1208, 1221, 1283
Ama87I CYCGRG 1 cut(s) 1796
AoxI GGCC 7 cut(s) 106, 418, 448, 1053, 1343, 1551, 1656
ApeKI GCWGC 4 cut(s) 1016, 1366, 1676, 1767
ArsI GACNNNNNNTTYG 4 cut(s) 959, 991, 1427, 1459
Asp700I GAANNNNTTC 1 cut(s) 1791
AspLEI GCGC 2 cut(s) 118, 894
AspS9I GGNCC 6 cut(s) 418, 448, 925, 1343, 1450, 1657
AsuC2I CCSGG 3 cut(s) 246, 1046, 1660
AsuHPI GGTGA 4 cut(s) 28, 1034, 1613, 1906
AsuII TTCGAA 2 cut(s) 1085, 1433
AsuNHI GCTAGC 2 cut(s) 1004, 1319
AvaI CYCGRG 1 cut(s) 1796
AvaII GGWCC 2 cut(s) 925, 1450
BalI TGGCCA 1 cut(s) 1055
BamHI GGATCC 2 cut(s) 771, 1213
BanI GGYRCC 2 cut(s) 872, 891
BanII GRGCYC 1 cut(s) 1621
BauI CACGAG 1 cut(s) 279
BbsI GAAGAC 3 cut(s) 156, 1656, 1904
Bbv12I GWGCWC 1 cut(s) 1621
BbvI GCAGC 4 cut(s) 1003, 1378, 1663, 1779
BccI CCATC 5 cut(s) 41, 501, 874, 1006, 1165
BceAI ACGGC 3 cut(s) 446, 879, 1249
BcgI CGANNNNNNTGC 2 cut(s) 260, 294
BciT130I CCWGG 2 cut(s) 987, 1221
BcnI CCSGG 3 cut(s) 246, 1046, 1660
BcoDI GTCTC 2 cut(s) 849, 1697
BfaI CTAG 8 cut(s) 201, 441, 645, 888, 1005, 1320, 1733, 1847
BfmI CTRYAG 3 cut(s) 1017, 1194, 1698
BfoI RGCGCY 2 cut(s) 119, 895
BfrI CTTAAG 1 cut(s) 1463
BfuAI ACCTGC 1 cut(s) 1010
BglII AGATCT 1 cut(s) 1329
BisI GCNGC 6 cut(s) 1017, 1367, 1395, 1554, 1677, 1768
BlsI GCNGC 6 cut(s) 1018, 1368, 1396, 1555, 1678, 1769
Bme1390I CCNGG 5 cut(s) 246, 987, 1046, 1221, 1660
Bme18I GGWCC 2 cut(s) 925, 1450
BmeRI GACNNNNNGTC 1 cut(s) 1905
BmeT110I CYCGRG 1 cut(s) 1796
BmgT120I GGNCC 6 cut(s) 418, 448, 925, 1343, 1450, 1657
BmiI GGNNCC 4 cut(s) 773, 874, 893, 1215
BmrFI CCNGG 5 cut(s) 246, 987, 1046, 1221, 1660
BmrI ACTGGG 1 cut(s) 1772
BmsI GCATC 8 cut(s) 340, 724, 947, 1123, 1389, 1621, 1734, 1784
BmtI GCTAGC 2 cut(s) 1008, 1323
BmuI ACTGGG 1 cut(s) 1772
BpiI GAAGAC 3 cut(s) 156, 1656, 1904
Bpu14I TTCGAA 2 cut(s) 1085, 1433
BpuEI CTTGAG 2 cut(s) 543, 1093
BpuMI CCSGG 3 cut(s) 246, 1046, 1660
BsaBI GATNNNNATC 2 cut(s) 254, 492
BsaHI GRCGYC 2 cut(s) 892, 969
BsaJI CCNNGG 5 cut(s) 245, 616, 676, 928, 986
BsaWI WCCGGW 1 cut(s) 365
BsaXI ACNNNNNCTCC 2 cut(s) 360, 390
Bsc4I CCNNNNNNNGG 6 cut(s) 104, 617, 1051, 1271, 1420, 1447
Bse1I ACTGG 2 cut(s) 109, 1767
Bse3DI GCAATG 1 cut(s) 1404
Bse8I GATNNNNATC 2 cut(s) 254, 492
BseBI CCWGG 2 cut(s) 987, 1221
BseDI CCNNGG 5 cut(s) 245, 616, 676, 928, 986
BseGI GGATG 3 cut(s) 289, 321, 1520
BseJI GATNNNNATC 2 cut(s) 254, 492
BseLI CCNNNNNNNGG 6 cut(s) 104, 617, 1051, 1271, 1420, 1447
BseMI GCAATG 1 cut(s) 1404
BseMII CTCAG 7 cut(s) 1104, 1317, 1328, 1353, 1554, 1667, 1682
BseNI ACTGG 2 cut(s) 109, 1767
BseRI GAGGAG 2 cut(s) 1217, 1847
BseXI GCAGC 4 cut(s) 1003, 1378, 1663, 1779
BseYI CCCAGC 1 cut(s) 1882
Bsh1236I CGCG 2 cut(s) 47, 470
BshFI GGCC 7 cut(s) 108, 420, 450, 1055, 1345, 1553, 1658
BshNI GGYRCC 2 cut(s) 872, 891
BsiHKAI GWGCWC 1 cut(s) 1621
BsiHKCI CYCGRG 1 cut(s) 1796
BsiSI CCGG 5 cut(s) 245, 293, 366, 1046, 1660
BslI CCNNNNNNNGG 6 cut(s) 104, 617, 1051, 1271, 1420, 1447
BsmAI GTCTC 2 cut(s) 849, 1697
BsnI GGCC 7 cut(s) 108, 420, 450, 1055, 1345, 1553, 1658
BsoBI CYCGRG 1 cut(s) 1796
Bsp119I TTCGAA 2 cut(s) 1085, 1433
Bsp1286I GDGCHC 1 cut(s) 1621
Bsp68I TCGCGA 1 cut(s) 47
BspACI CCGC 6 cut(s) 330, 650, 775, 1394, 1554, 1886
BspANI GGCC 7 cut(s) 108, 420, 450, 1055, 1345, 1553, 1658
BspCNI CTCAG 7 cut(s) 1103, 1318, 1329, 1354, 1555, 1666, 1681
BspFNI CGCG 2 cut(s) 47, 470
BspLI GGNNCC 4 cut(s) 773, 874, 893, 1215
BspMAI CTGCAG 1 cut(s) 1021
BspMI ACCTGC 1 cut(s) 1010
BspOI GCTAGC 2 cut(s) 1008, 1323
BspPI GGATC 6 cut(s) 594, 766, 779, 1208, 1221, 1283
BspQI GCTCTTC 1 cut(s) 129
BspT104I TTCGAA 2 cut(s) 1085, 1433
BspT107I GGYRCC 2 cut(s) 872, 891
BspTI CTTAAG 1 cut(s) 1463
BsrDI GCAATG 1 cut(s) 1404
BsrI ACTGG 2 cut(s) 109, 1767
BssECI CCNNGG 5 cut(s) 245, 616, 676, 928, 986
BssNI GRCGYC 2 cut(s) 892, 969
BssSI CACGAG 1 cut(s) 279
BssT1I CCWWGG 2 cut(s) 616, 928
Bst2BI CACGAG 1 cut(s) 279
Bst2UI CCWGG 2 cut(s) 987, 1221
Bst6I CTCTTC 2 cut(s) 129, 812
BstACI GRCGYC 2 cut(s) 892, 969
BstAFI CTTAAG 1 cut(s) 1463
BstBI TTCGAA 2 cut(s) 1085, 1433
BstC8I GCNNGC 7 cut(s) 120, 687, 1006, 1283, 1317, 1321, 1674
BstDEI CTNAG 9 cut(s) 843, 1090, 1326, 1337, 1352, 1362, 1563, 1653, 1668
BstF5I GGATG 3 cut(s) 289, 321, 1520
BstFNI CGCG 2 cut(s) 47, 470
BstH2I RGCGCY 2 cut(s) 119, 895
BstHHI GCGC 2 cut(s) 118, 894
BstMAI GTCTC 2 cut(s) 849, 1697
BstMWI GCNNNNNNNGC 1 cut(s) 467
BstNI CCWGG 2 cut(s) 987, 1221
BstNSI RCATGY 2 cut(s) 434, 1285
BstSCI CCNGG 5 cut(s) 244, 985, 1044, 1219, 1658
BstSFI CTRYAG 3 cut(s) 1017, 1194, 1698
BstUI CGCG 2 cut(s) 47, 470
BstV1I GCAGC 4 cut(s) 1003, 1378, 1663, 1779
BstV2I GAAGAC 3 cut(s) 156, 1656, 1904
BstX2I RGATCY 5 cut(s) 586, 771, 1213, 1288, 1329
BstYI RGATCY 5 cut(s) 586, 771, 1213, 1288, 1329
BsuRI GGCC 7 cut(s) 108, 420, 450, 1055, 1345, 1553, 1658
BtgZI GCGATG 1 cut(s) 1361
BtsCI GGATG 3 cut(s) 289, 321, 1520
BtsIMutI CAGTG 1 cut(s) 98
BtuMI TCGCGA 1 cut(s) 47
BveI ACCTGC 1 cut(s) 1010
Cac8I GCNNGC 7 cut(s) 120, 687, 1006, 1283, 1317, 1321, 1674
CfoI GCGC 2 cut(s) 118, 894
Cfr13I GGNCC 6 cut(s) 418, 448, 925, 1343, 1450, 1657
CseI GACGC 1 cut(s) 459
CsiI ACCWGGT 1 cut(s) 1219
Csp6I GTAC 5 cut(s) 466, 802, 1224, 1359, 1727
CviQI GTAC 5 cut(s) 466, 802, 1224, 1359, 1727
DdeI CTNAG 9 cut(s) 843, 1090, 1326, 1337, 1352, 1362, 1563, 1653, 1668
DinI GGCGCC 1 cut(s) 893
DriI GACNNNNNGTC 1 cut(s) 1905
EaeI YGGCCR 2 cut(s) 1053, 1551
Eam1104I CTCTTC 2 cut(s) 129, 812
Eam1105I GACNNNNNGTC 1 cut(s) 1905
EarI CTCTTC 2 cut(s) 129, 812
Ecl136II GAGCTC 1 cut(s) 1619
Eco130I CCWWGG 2 cut(s) 616, 928
Eco24I GRGCYC 1 cut(s) 1621
Eco32I GATATC 1 cut(s) 1405
Eco47I GGWCC 2 cut(s) 925, 1450
Eco53kI GAGCTC 1 cut(s) 1619
Eco57I CTGAAG 3 cut(s) 104, 131, 189
Eco88I CYCGRG 1 cut(s) 1796
EcoICRI GAGCTC 1 cut(s) 1619
EcoO109I RGGNCCY 2 cut(s) 925, 1450
EcoRII CCWGG 2 cut(s) 985, 1219
EcoRV GATATC 1 cut(s) 1405
EcoT14I CCWWGG 2 cut(s) 616, 928
EcoT22I ATGCAT 2 cut(s) 150, 1116
EcoT38I GRGCYC 1 cut(s) 1621
EgeI GGCGCC 1 cut(s) 893
EheI GGCGCC 1 cut(s) 893
ErhI CCWWGG 2 cut(s) 616, 928
FalI AAGNNNNNCTT 2 cut(s) 1457, 1489
FblI GTMKAC 1 cut(s) 359
Fnu4HI GCNGC 6 cut(s) 1017, 1367, 1395, 1554, 1677, 1768
FokI GGATG 3 cut(s) 276, 308, 1507
FriOI GRGCYC 1 cut(s) 1621
Fsp4HI GCNGC 6 cut(s) 1017, 1367, 1395, 1554, 1677, 1768
FspBI CTAG 8 cut(s) 201, 441, 645, 888, 1005, 1320, 1733, 1847
GlaI GCGC 2 cut(s) 117, 893
GluI GCNGC 6 cut(s) 1017, 1367, 1395, 1554, 1677, 1768
GsaI CCCAGC 1 cut(s) 1886
HaeII RGCGCY 2 cut(s) 119, 895
HaeIII GGCC 7 cut(s) 108, 420, 450, 1055, 1345, 1553, 1658
HapII CCGG 5 cut(s) 245, 293, 366, 1046, 1660
HgaI GACGC 1 cut(s) 459
HhaI GCGC 2 cut(s) 118, 894
Hin1I GRCGYC 2 cut(s) 892, 969
Hin6I GCGC 2 cut(s) 116, 892
HinP1I GCGC 2 cut(s) 116, 892
HincII GTYRAC 3 cut(s) 198, 360, 973
HindII GTYRAC 3 cut(s) 198, 360, 973
HindIII AAGCTT 2 cut(s) 305, 722
HinfI GANTC 8 cut(s) 59, 250, 386, 857, 1025, 1514, 1603, 1906
HpaI GTTAAC 1 cut(s) 198
HpaII CCGG 5 cut(s) 245, 293, 366, 1046, 1660
HphI GGTGA 4 cut(s) 28, 1034, 1613, 1906
Hpy166II GTNNAC 5 cut(s) 198, 240, 360, 466, 973
Hpy188I TCNGA 7 cut(s) 169, 314, 943, 1327, 1338, 1447, 1724
Hpy188III TCNNGA 7 cut(s) 46, 259, 281, 1408, 1607, 1683, 1733
Hpy8I GTNNAC 5 cut(s) 198, 240, 360, 466, 973
Hpy99I CGWCG 2 cut(s) 971, 1447
HpyAV CCTTC 6 cut(s) 43, 106, 175, 223, 276, 515
HpyCH4IV ACGT 3 cut(s) 969, 1108, 1729
HpyCH4V TGCA 8 cut(s) 148, 669, 831, 1019, 1114, 1285, 1493, 1634
HpyF10VI GCNNNNNNNGC 1 cut(s) 467
HpyF3I CTNAG 9 cut(s) 843, 1090, 1326, 1337, 1352, 1362, 1563, 1653, 1668
HpySE526I ACGT 3 cut(s) 969, 1108, 1729
Hsp92I GRCGYC 2 cut(s) 892, 969
HspAI GCGC 2 cut(s) 116, 892
KasI GGCGCC 1 cut(s) 891
KspAI GTTAAC 1 cut(s) 198
LguI GCTCTTC 1 cut(s) 129
LmnI GCTCC 3 cut(s) 332, 1801, 1808
Lsp1109I GCAGC 4 cut(s) 1003, 1378, 1663, 1779
LweI GCATC 8 cut(s) 340, 724, 947, 1123, 1389, 1621, 1734, 1784
MabI ACCWGGT 1 cut(s) 1219
MaeI CTAG 8 cut(s) 201, 441, 645, 888, 1005, 1320, 1733, 1847
MaeII ACGT 3 cut(s) 969, 1108, 1729
MaeIII GTNAC 2 cut(s) 281, 1644
MfeI CAATTG 1 cut(s) 1494
MflI RGATCY 5 cut(s) 586, 771, 1213, 1288, 1329
MhlI GDGCHC 1 cut(s) 1621
MlsI TGGCCA 1 cut(s) 1055
MluCI AATT 4 cut(s) 573, 1494, 1536, 1545
MluI ACGCGT 1 cut(s) 468
MluNI TGGCCA 1 cut(s) 1055
Mly113I GGCGCC 1 cut(s) 892
MlyI GAGTC 4 cut(s) 395, 851, 1612, 1915
MmeI TCCRAC 1 cut(s) 1425
Mox20I TGGCCA 1 cut(s) 1055
Mph1103I ATGCAT 2 cut(s) 150, 1116
MroXI GAANNNNTTC 1 cut(s) 1791
MscI TGGCCA 1 cut(s) 1055
MseI TTAA 7 cut(s) 21, 153, 197, 303, 1464, 1506, 1526
MslI CAYNNNNRTG 2 cut(s) 279, 1868
Msp20I TGGCCA 1 cut(s) 1055
MspA1I CMGCKG 1 cut(s) 1886
MspCI CTTAAG 1 cut(s) 1463
MspI CCGG 5 cut(s) 245, 293, 366, 1046, 1660
MspR9I CCNGG 5 cut(s) 246, 987, 1046, 1221, 1660
MunI CAATTG 1 cut(s) 1494
MvaI CCWGG 2 cut(s) 987, 1221
MvnI CGCG 2 cut(s) 47, 470
MwoI GCNNNNNNNGC 1 cut(s) 467
NarI GGCGCC 1 cut(s) 892
NciI CCSGG 3 cut(s) 246, 1046, 1660
NheI GCTAGC 2 cut(s) 1004, 1319
NlaIV GGNNCC 4 cut(s) 773, 874, 893, 1215
NmeAIII GCCGAG 1 cut(s) 931
NmuCI GTSAC 2 cut(s) 281, 1644
NruI TCGCGA 1 cut(s) 47
NsiI ATGCAT 2 cut(s) 150, 1116
NspI RCATGY 2 cut(s) 434, 1285
NspV TTCGAA 2 cut(s) 1085, 1433
PaeI GCATGC 1 cut(s) 1285
PaqCI CACCTGC 1 cut(s) 1010
PciI ACATGT 1 cut(s) 430
PciSI GCTCTTC 1 cut(s) 129
PcsI WCGNNNNNNNCGW 1 cut(s) 1439
PdmI GAANNNNTTC 1 cut(s) 1791
PfeI GAWTC 4 cut(s) 59, 250, 1025, 1514
PflFI GACNNNGTC 1 cut(s) 635
PflMI CCANNNNNTGG 1 cut(s) 104
PkrI GCNGC 6 cut(s) 1018, 1368, 1396, 1555, 1678, 1769
PleI GAGTC 4 cut(s) 394, 851, 1611, 1914
PluTI GGCGCC 1 cut(s) 895
PpsI GAGTC 4 cut(s) 394, 851, 1611, 1914
PpuMI RGGWCCY 2 cut(s) 925, 1450
PscI ACATGT 1 cut(s) 430
PsiI TTATAA 1 cut(s) 1065
Psp124BI GAGCTC 1 cut(s) 1621
Psp5II RGGWCCY 2 cut(s) 925, 1450
Psp6I CCWGG 2 cut(s) 985, 1219
PspFI CCCAGC 1 cut(s) 1882
PspGI CCWGG 2 cut(s) 985, 1219
PspN4I GGNNCC 4 cut(s) 773, 874, 893, 1215
PspPI GGNCC 6 cut(s) 418, 448, 925, 1343, 1450, 1657
PspPPI RGGWCCY 2 cut(s) 925, 1450
PstI CTGCAG 1 cut(s) 1021
PsuI RGATCY 5 cut(s) 586, 771, 1213, 1288, 1329
PsyI GACNNNGTC 1 cut(s) 635
RruI TCGCGA 1 cut(s) 47
RsaI GTAC 5 cut(s) 467, 803, 1225, 1360, 1728
RsaNI GTAC 5 cut(s) 466, 802, 1224, 1359, 1727
RseI CAYNNNNRTG 2 cut(s) 279, 1868
SacI GAGCTC 1 cut(s) 1621
SalI GTCGAC 1 cut(s) 358
SapI GCTCTTC 1 cut(s) 129
SaqAI TTAA 7 cut(s) 21, 153, 197, 303, 1464, 1506, 1526
SatI GCNGC 6 cut(s) 1017, 1367, 1395, 1554, 1677, 1768
Sau96I GGNCC 6 cut(s) 418, 448, 925, 1343, 1450, 1657
SchI GAGTC 4 cut(s) 395, 851, 1612, 1915
ScrFI CCNGG 5 cut(s) 246, 987, 1046, 1221, 1660
SduI GDGCHC 1 cut(s) 1621
SexAI ACCWGGT 1 cut(s) 1219
SfaNI GCATC 8 cut(s) 340, 724, 947, 1123, 1389, 1621, 1734, 1784
SfcI CTRYAG 3 cut(s) 1017, 1194, 1698
SfoI GGCGCC 1 cut(s) 893
SfuI TTCGAA 2 cut(s) 1085, 1433
SinI GGWCC 2 cut(s) 925, 1450
SmiMI CAYNNNNRTG 2 cut(s) 279, 1868
SmlI CTYRAG 3 cut(s) 558, 1072, 1463
SmoI CTYRAG 3 cut(s) 558, 1072, 1463
SphI GCATGC 1 cut(s) 1285
Sse9I AATT 4 cut(s) 573, 1494, 1536, 1545
SsiI CCGC 6 cut(s) 330, 650, 775, 1394, 1554, 1886
SspDI GGCGCC 1 cut(s) 891
SspI AATATT 1 cut(s) 1060
SspMI CTAG 8 cut(s) 201, 441, 645, 888, 1005, 1320, 1733, 1847
SstI GAGCTC 1 cut(s) 1621
StyD4I CCNGG 5 cut(s) 244, 985, 1044, 1219, 1658
StyI CCWWGG 2 cut(s) 616, 928
TaiI ACGT 3 cut(s) 972, 1111, 1732
TaqI TCGA 9 cut(s) 214, 359, 519, 739, 815, 1085, 1433, 1478, 1909
TasI AATT 4 cut(s) 573, 1494, 1536, 1545
TauI GCSGC 2 cut(s) 1397, 1556
TfiI GAWTC 4 cut(s) 59, 250, 1025, 1514
Tru1I TTAA 7 cut(s) 21, 153, 197, 303, 1464, 1506, 1526
Tru9I TTAA 7 cut(s) 21, 153, 197, 303, 1464, 1506, 1526
TscAI CASTG 1 cut(s) 105
TseFI GTSAC 2 cut(s) 281, 1644
TseI GCWGC 4 cut(s) 1016, 1366, 1676, 1767
Tsp45I GTSAC 2 cut(s) 281, 1644
TspDTI ATGAA 6 cut(s) 497, 539, 756, 1136, 1364, 1509
TspGWI ACGGA 4 cut(s) 239, 314, 1181, 1708
TspRI CASTG 1 cut(s) 105
Tth111I GACNNNGTC 1 cut(s) 635
Van91I CCANNNNNTGG 1 cut(s) 104
Vha464I CTTAAG 1 cut(s) 1463
VpaK11BI GGWCC 2 cut(s) 925, 1450
XbaI TCTAGA 1 cut(s) 1732
XceI RCATGY 2 cut(s) 434, 1285
XmiI GTMKAC 1 cut(s) 359
XmnI GAANNNNTTC 1 cut(s) 1791
XspI CTAG 8 cut(s) 201, 441, 645, 888, 1005, 1320, 1733, 1847
ZraI GACGTC 1 cut(s) 970
Zsp2I ATGCAT 2 cut(s) 150, 1116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.