pycom12g09570

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
OG0000179
Physical Location & Seq
Forward (+)
11486364 .. 11488535
2172 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g09570.6

Sequence Viewer

Length: 1830 bp
ATGATTTTGTCTAGCTTGCACCCTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTCCATGCTTTGATGATGAGTACGATAGACTGACACTGCTGGGTTTCTCGATGGGCTTCCTTGCTGCACCGCATTCTTCTCGCACGCGGACCATCTTTTACTTGTATAGTCACTTTATTCCATTCTTTACTGCATGCGGATTGCTGTTTGCTTGGTCACTGCGCAGTCTGCACTTCTTTTACTTCTACAGGTTCTTCTATAAAATGTACATGTATAGGATCGAACCGTCACCGCACAACCATTGCGCCGTCACTGCATTGCTTGTTGCCTTGCATCCCGACTGCCTTTCCTTCCTTCACAGTGAGGTTTCCTTACTTCCCAGAATCGCATGCATGCATCCATATATATATATATATAATACACTAAAAATATATATATATATATATATATATATATATATATATTGTCACATCCCAGACTCCAACCTCTCGGATATTGTCCGCTTTGGCATTTTGGGCCTGGACTATGTCGCAGCCACCCAATTACTGCACGGTTTTGTTTTTGCAGGCCGTAGCCCCAAAAGGCCTCCTCTAAAGTTAAAGCTCTGGGCATGGATATATAAGGCCCAAAGACCACGCCCTCACGGGCGATGTGGGATACTACAATCCACCCCCTTAGGAAGCCCGACGTCCTCGTCGGCACACCACGACCGTGAGTCTGGCTCTGATACCAAATTGTCACATCCCAGACTCCAACCTCTCGGATATTGTCCGCTTTGGCATTCTGGGCCTGGACTATGTCGCAGCCACCCAGCTACCGCACGCTCTGGGCATGGATATATAAGGCCCAAAAACCACGCCCTCACGGGCGATGTGGGATACTACAATCCACCCCCCTTAGGGAGCCCGACGTCCTCGTTGGCACACCACGACCGTGAGTCTAGCTCTGATACCAAATTGTCACATCCCAGACTCCAACCTCTCGGATATTGTCCGCTTTGGCATTCTGGGCCTGGACTATGTCGCAGCCACCCAGCTACCGTACGATTTTGTTCTTGCCCAAAGACCACGCCCTCACGGGCGATGTGGGATACTACATATATATATATATATATATATATATATATATATAATACAATAAAAGTGTGCCTAGTACACTTTATGCAGATTCCCATATATATAATATATATATATATATATATATATAATGTGATAAAATGTGATTATAGATATTTATATATTATGGAGCACGGTGCCAGGACTTCGCGGAGCTTCCAGAGATGTGGTAGTTGGTGGCGGAGTAGGCAGGATTGCGGGTGTACATATGCTTTTTGCTGCCTATGCCTTTTGATCATAGTTTTCCCTCGGTGGTGCGCTGCCGTGTGGTGCTGCTCAAGTTTTGTGGCTGATTTTGCTTTGTTGCGGTCATGGTATTTTTTTAATTGTTTTAAGAGCAACACCCTCACCATTCTTGCGAAGGAAAGTGATTTGCAAGATAGGGGAACAACGCTGAAGGTTTACGCCCCAATGACTGGCCCTAAGGCGCTTGCTCTTCCTACAAAAGACAACTCCATGCATATTAAGTCGTGGTCTTGTGAAGTATCTTGGGAGGTGGCAGACTTTGTTCGATCAAATACGGAGAAGAAGGCATACACCCTGAGGATTCTTATCTTGAACCCTTCGCACCATGCTCGTGACAATCATCCGGCTTCGTTTAAGCTTCTTGGTGGTCACATCCGCAGCGGAGCTATGGCTTGGAATGATGTCTTGTCGACTACCGGAGAAGCTGTTTTTGTTGAGTCTTATTGGGAGTGGCTTGAAGATGTCTTGGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

610

Amino Acids

70.31

Weight (kDa)

8.97

Isoelectric Point (pI)

49.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 688
AatII GACGTC 2 cut(s) 686, 908
Acc16I TGCGCA 1 cut(s) 218
AccB1I GGYRCC 1 cut(s) 1247
AccB7I CCANNNNNTGG 1 cut(s) 1526
AccI GTMKAC 1 cut(s) 1766
AccII CGCG 2 cut(s) 142, 1261
AclWI GGATC 1 cut(s) 281
AcuI CTGAAG 1 cut(s) 1526
AcyI GRCGYC 2 cut(s) 683, 905
AfaI GTAC 5 cut(s) 77, 263, 1038, 1149, 1315
AfiI CCNNNNNNNGG 3 cut(s) 893, 894, 1526
AflIII ACRYGT 1 cut(s) 264
AgsI TTSAA 2 cut(s) 1669, 1814
AhdI GACNNNNNGTC 2 cut(s) 709, 931
AjnI CCWGG 4 cut(s) 513, 784, 1006, 1250
AleI CACNNNNGTG 2 cut(s) 705, 927
AluBI AGCT 9 cut(s) 15, 598, 809, 939, 1031, 1266, 1714, 1742, 1781
AluI AGCT 9 cut(s) 15, 598, 809, 939, 1031, 1266, 1714, 1742, 1781
Alw21I GWGCWC 1 cut(s) 1245
AlwI GGATC 1 cut(s) 281
AoxI GGCC 8 cut(s) 511, 562, 578, 618, 782, 839, 1004, 1528
ApeKI GCWGC 8 cut(s) 119, 527, 798, 1020, 1329, 1370, 1383, 1734
AspLEI GCGC 4 cut(s) 219, 302, 1370, 1540
AspS9I GGNCC 7 cut(s) 144, 511, 619, 782, 840, 1004, 1529
AsuHPI GGTGA 2 cut(s) 276, 1450
AvaII GGWCC 1 cut(s) 144
AxyI CCTNAGG 4 cut(s) 670, 892, 1533, 1652
BanI GGYRCC 1 cut(s) 1247
BanII GRGCYC 1 cut(s) 902
BarI GAAGNNNNNNTAC 2 cut(s) 1628, 1660
BauI CACGAG 1 cut(s) 1686
Bbv12I GWGCWC 1 cut(s) 1245
BbvI GCAGC 8 cut(s) 106, 539, 810, 1032, 1316, 1357, 1370, 1746
BccI CCATC 2 cut(s) 100, 155
BceAI ACGGC 3 cut(s) 287, 549, 1358
BcgI CGANNNNNNTGC 4 cut(s) 116, 150, 1667, 1701
BciT130I CCWGG 4 cut(s) 515, 786, 1008, 1252
BciVI GTATCC 3 cut(s) 645, 866, 1078
BclI TGATCA 1 cut(s) 1344
BfaI CTAG 3 cut(s) 12, 936, 1145
BfmI CTRYAG 1 cut(s) 241
BfoI RGCGCY 1 cut(s) 1541
BfuI GTATCC 3 cut(s) 645, 866, 1078
BisI GCNGC 8 cut(s) 120, 528, 799, 1021, 1330, 1371, 1384, 1735
BlsI GCNGC 8 cut(s) 121, 529, 800, 1022, 1331, 1372, 1385, 1736
Bme1390I CCNGG 4 cut(s) 515, 786, 1008, 1252
Bme18I GGWCC 1 cut(s) 144
BmeRI GACNNNNNGTC 2 cut(s) 709, 931
BmgT120I GGNCC 7 cut(s) 144, 511, 619, 782, 840, 1004, 1529
BmiI GGNNCC 2 cut(s) 899, 1249
BmrFI CCNGG 4 cut(s) 515, 786, 1008, 1252
BmsI GCATC 2 cut(s) 337, 400
BplI GAGNNNNNCTC 4 cut(s) 701, 733, 923, 955
BpuEI CTTGAG 1 cut(s) 1372
BsaBI GATNNNNATC 1 cut(s) 1661
BsaHI GRCGYC 2 cut(s) 683, 905
BsaJI CCNNGG 1 cut(s) 1358
BsaWI WCCGGW 1 cut(s) 1772
BsaXI ACNNNNNCTCC 2 cut(s) 1767, 1797
Bsc4I CCNNNNNNNGG 3 cut(s) 893, 894, 1526
Bse1I ACTGG 1 cut(s) 1531
Bse21I CCTNAGG 4 cut(s) 670, 892, 1533, 1652
Bse3DI GCAATG 2 cut(s) 295, 311
Bse8I GATNNNNATC 1 cut(s) 1661
BseBI CCWGG 4 cut(s) 515, 786, 1008, 1252
BseDI CCNNGG 1 cut(s) 1358
BseGI GGATG 7 cut(s) 328, 391, 465, 736, 958, 1696, 1728
BseJI GATNNNNATC 1 cut(s) 1661
BseLI CCNNNNNNNGG 3 cut(s) 893, 894, 1526
BseMI GCAATG 2 cut(s) 295, 311
BseMII CTCAG 1 cut(s) 1643
BseNI ACTGG 1 cut(s) 1531
BseRI GAGGAG 1 cut(s) 573
BseXI GCAGC 8 cut(s) 106, 539, 810, 1032, 1316, 1357, 1370, 1746
BseYI CCCAGC 3 cut(s) 94, 805, 1027
BsgI GTGCAG 3 cut(s) 105, 209, 527
Bsh1236I CGCG 2 cut(s) 142, 1261
Bsh1285I CGRYCG 2 cut(s) 706, 928
BshFI GGCC 8 cut(s) 513, 564, 580, 620, 784, 841, 1006, 1530
BshNI GGYRCC 1 cut(s) 1247
BsiEI CGRYCG 2 cut(s) 706, 928
BsiHKAI GWGCWC 1 cut(s) 1245
BsiSI CCGG 2 cut(s) 1700, 1773
BsiWI CGTACG 1 cut(s) 1036
BslI CCNNNNNNNGG 3 cut(s) 893, 894, 1526
BsmI GAATGC 3 cut(s) 127, 775, 997
BsnI GGCC 8 cut(s) 513, 564, 580, 620, 784, 841, 1006, 1530
Bsp1286I GDGCHC 2 cut(s) 902, 1245
Bsp1407I TGTACA 2 cut(s) 261, 1313
Bsp143I GATC 3 cut(s) 273, 1344, 1622
BspANI GGCC 8 cut(s) 513, 564, 580, 620, 784, 841, 1006, 1530
BspCNI CTCAG 1 cut(s) 1644
BspFNI CGCG 2 cut(s) 142, 1261
BspLI GGNNCC 2 cut(s) 899, 1249
BspPI GGATC 1 cut(s) 281
BspQI GCTCTTC 1 cut(s) 1551
BspT107I GGYRCC 1 cut(s) 1247
BsrDI GCAATG 2 cut(s) 295, 311
BsrGI TGTACA 2 cut(s) 261, 1313
BsrI ACTGG 1 cut(s) 1531
BssECI CCNNGG 1 cut(s) 1358
BssMI GATC 3 cut(s) 273, 1344, 1622
BssNI GRCGYC 2 cut(s) 683, 905
BssSI CACGAG 1 cut(s) 1686
Bst2BI CACGAG 1 cut(s) 1686
Bst2UI CCWGG 4 cut(s) 515, 786, 1008, 1252
Bst4CI ACNGT 7 cut(s) 282, 356, 548, 707, 929, 1036, 1247
Bst6I CTCTTC 1 cut(s) 1551
BstACI GRCGYC 2 cut(s) 683, 905
BstAUI TGTACA 2 cut(s) 261, 1313
BstC8I GCNNGC 8 cut(s) 17, 140, 190, 385, 389, 562, 817, 1542
BstDEI CTNAG 4 cut(s) 670, 892, 1533, 1652
BstF5I GGATG 7 cut(s) 328, 391, 465, 736, 958, 1696, 1728
BstFNI CGCG 2 cut(s) 142, 1261
BstH2I RGCGCY 1 cut(s) 1541
BstHHI GCGC 4 cut(s) 219, 302, 1370, 1540
BstKTI GATC 3 cut(s) 276, 1347, 1625
BstMBI GATC 3 cut(s) 273, 1344, 1622
BstMCI CGRYCG 2 cut(s) 706, 928
BstMWI GCNNNNNNNGC 8 cut(s) 223, 308, 510, 781, 1003, 1297, 1335, 1406
BstNI CCWGG 4 cut(s) 515, 786, 1008, 1252
BstNSI RCATGY 4 cut(s) 192, 268, 387, 391
BstSCI CCNGG 4 cut(s) 513, 784, 1006, 1250
BstSFI CTRYAG 1 cut(s) 241
BstUI CGCG 2 cut(s) 142, 1261
BstV1I GCAGC 8 cut(s) 106, 539, 810, 1032, 1316, 1357, 1370, 1746
BstXI CCANNNNNNTGG 1 cut(s) 1277
Bsu36I CCTNAGG 4 cut(s) 670, 892, 1533, 1652
BsuI GTATCC 3 cut(s) 645, 866, 1078
BsuRI GGCC 8 cut(s) 513, 564, 580, 620, 784, 841, 1006, 1530
BtgZI GCGATG 3 cut(s) 658, 879, 1091
BtsCI GGATG 7 cut(s) 328, 391, 465, 736, 958, 1696, 1728
BtsI GCAGTG 3 cut(s) 89, 212, 306
BtsIMutI CAGTG 4 cut(s) 89, 212, 306, 361
Cac8I GCNNGC 8 cut(s) 17, 140, 190, 385, 389, 562, 817, 1542
CfoI GCGC 4 cut(s) 219, 302, 1370, 1540
Cfr13I GGNCC 7 cut(s) 144, 511, 619, 782, 840, 1004, 1529
Csp6I GTAC 5 cut(s) 76, 262, 1037, 1148, 1314
CspCI CAANNNNNGTGG 2 cut(s) 1377, 1412
CviQI GTAC 5 cut(s) 76, 262, 1037, 1148, 1314
DdeI CTNAG 4 cut(s) 670, 892, 1533, 1652
DpnI GATC 3 cut(s) 275, 1346, 1624
DpnII GATC 3 cut(s) 273, 1344, 1622
DrdI GACNNNNNNGTC 1 cut(s) 688
DriI GACNNNNNGTC 2 cut(s) 709, 931
DseDI GACNNNNNNGTC 1 cut(s) 688
Eam1104I CTCTTC 1 cut(s) 1551
Eam1105I GACNNNNNGTC 2 cut(s) 709, 931
EarI CTCTTC 1 cut(s) 1551
EciI GGCGGA 1 cut(s) 1306
Eco147I AGGCCT 1 cut(s) 580
Eco24I GRGCYC 1 cut(s) 902
Eco47I GGWCC 1 cut(s) 144
Eco57I CTGAAG 1 cut(s) 1526
Eco81I CCTNAGG 4 cut(s) 670, 892, 1533, 1652
EcoRII CCWGG 4 cut(s) 513, 784, 1006, 1250
EcoT22I ATGCAT 3 cut(s) 389, 393, 1572
EcoT38I GRGCYC 1 cut(s) 902
FauI CCCGC 1 cut(s) 1301
FauNDI CATATG 1 cut(s) 1318
FbaI TGATCA 1 cut(s) 1344
FblI GTMKAC 1 cut(s) 1766
Fnu4HI GCNGC 8 cut(s) 120, 528, 799, 1021, 1330, 1371, 1384, 1735
FokI GGATG 7 cut(s) 315, 378, 452, 723, 945, 1683, 1715
FriOI GRGCYC 1 cut(s) 902
Fsp4HI GCNGC 8 cut(s) 120, 528, 799, 1021, 1330, 1371, 1384, 1735
FspBI CTAG 3 cut(s) 12, 936, 1145
FspI TGCGCA 1 cut(s) 218
GlaI GCGC 4 cut(s) 218, 301, 1369, 1539
GluI GCNGC 8 cut(s) 120, 528, 799, 1021, 1330, 1371, 1384, 1735
GsaI CCCAGC 3 cut(s) 98, 809, 1031
HaeII RGCGCY 1 cut(s) 1541
HaeIII GGCC 8 cut(s) 513, 564, 580, 620, 784, 841, 1006, 1530
HapII CCGG 2 cut(s) 1700, 1773
HhaI GCGC 4 cut(s) 219, 302, 1370, 1540
Hin1I GRCGYC 2 cut(s) 683, 905
Hin6I GCGC 4 cut(s) 217, 300, 1368, 1538
HinP1I GCGC 4 cut(s) 217, 300, 1368, 1538
HincII GTYRAC 1 cut(s) 1767
HindII GTYRAC 1 cut(s) 1767
HindIII AAGCTT 1 cut(s) 1712
HinfI GANTC 9 cut(s) 378, 473, 710, 744, 932, 966, 1162, 1657, 1793
HpaII CCGG 2 cut(s) 1700, 1773
HphI GGTGA 2 cut(s) 276, 1450
Hpy166II GTNNAC 4 cut(s) 1150, 1314, 1513, 1767
Hpy188I TCNGA 5 cut(s) 487, 721, 758, 943, 980
Hpy188III TCNNGA 5 cut(s) 103, 332, 1270, 1666, 1688
Hpy8I GTNNAC 4 cut(s) 1150, 1314, 1513, 1767
Hpy99I CGWCG 3 cut(s) 685, 694, 907
HpyAV CCTTC 6 cut(s) 355, 359, 1465, 1501, 1633, 1683
HpyCH4III ACNGT 7 cut(s) 282, 356, 548, 707, 929, 1036, 1247
HpyCH4IV ACGT 2 cut(s) 683, 905
HpyF10VI GCNNNNNNNGC 8 cut(s) 223, 308, 510, 781, 1003, 1297, 1335, 1406
HpyF3I CTNAG 4 cut(s) 670, 892, 1533, 1652
HpySE526I ACGT 2 cut(s) 683, 905
Hsp92I GRCGYC 2 cut(s) 683, 905
HspAI GCGC 4 cut(s) 217, 300, 1368, 1538
Ksp22I TGATCA 1 cut(s) 1344
Kzo9I GATC 3 cut(s) 273, 1344, 1622
LguI GCTCTTC 1 cut(s) 1551
LmnI GCTCC 4 cut(s) 897, 1240, 1263, 1739
Lsp1109I GCAGC 8 cut(s) 106, 539, 810, 1032, 1316, 1357, 1370, 1746
LweI GCATC 2 cut(s) 337, 400
MaeI CTAG 3 cut(s) 12, 936, 1145
MaeII ACGT 2 cut(s) 683, 905
MaeIII GTNAC 9 cut(s) 164, 210, 282, 304, 461, 732, 954, 1688, 1724
MalI GATC 3 cut(s) 275, 1346, 1624
MboI GATC 3 cut(s) 273, 1344, 1622
MboII GAAGA 5 cut(s) 123, 241, 1538, 1648, 1826
MhlI GDGCHC 2 cut(s) 902, 1245
MluCI AATT 4 cut(s) 536, 728, 950, 1435
MlyI GAGTC 6 cut(s) 467, 719, 738, 941, 960, 1802
MmeI TCCRAC 3 cut(s) 501, 772, 994
Mph1103I ATGCAT 3 cut(s) 389, 393, 1572
MseI TTAA 5 cut(s) 593, 1434, 1443, 1575, 1710
MslI CAYNNNNRTG 3 cut(s) 705, 927, 1686
MspA1I CMGCKG 1 cut(s) 1737
MspI CCGG 2 cut(s) 1700, 1773
MspR9I CCNGG 4 cut(s) 515, 786, 1008, 1252
Mva1269I GAATGC 3 cut(s) 127, 775, 997
MvaI CCWGG 4 cut(s) 515, 786, 1008, 1252
MvnI CGCG 2 cut(s) 142, 1261
MwoI GCNNNNNNNGC 8 cut(s) 223, 308, 510, 781, 1003, 1297, 1335, 1406
NdeI CATATG 1 cut(s) 1318
NdeII GATC 3 cut(s) 273, 1344, 1622
NlaIV GGNNCC 2 cut(s) 899, 1249
NmuCI GTSAC 9 cut(s) 164, 210, 282, 304, 461, 732, 954, 1688, 1724
NsbI TGCGCA 1 cut(s) 218
NsiI ATGCAT 3 cut(s) 389, 393, 1572
NspI RCATGY 4 cut(s) 192, 268, 387, 391
OliI CACNNNNGTG 2 cut(s) 705, 927
PaeI GCATGC 3 cut(s) 192, 387, 391
PceI AGGCCT 1 cut(s) 580
PciI ACATGT 1 cut(s) 264
PciSI GCTCTTC 1 cut(s) 1551
PctI GAATGC 3 cut(s) 127, 775, 997
PfeI GAWTC 3 cut(s) 378, 1162, 1657
Pfl23II CGTACG 1 cut(s) 1036
PflFI GACNNNGTC 3 cut(s) 521, 792, 1014
PflMI CCANNNNNTGG 1 cut(s) 1526
PkrI GCNGC 8 cut(s) 121, 529, 800, 1022, 1331, 1372, 1385, 1736
PleI GAGTC 6 cut(s) 467, 718, 738, 940, 960, 1801
PpsI GAGTC 6 cut(s) 467, 718, 738, 940, 960, 1801
PscI ACATGT 1 cut(s) 264
Psp6I CCWGG 4 cut(s) 513, 784, 1006, 1250
PspFI CCCAGC 3 cut(s) 94, 805, 1027
PspGI CCWGG 4 cut(s) 513, 784, 1006, 1250
PspLI CGTACG 1 cut(s) 1036
PspN4I GGNNCC 2 cut(s) 899, 1249
PspPI GGNCC 7 cut(s) 144, 511, 619, 782, 840, 1004, 1529
PsyI GACNNNGTC 3 cut(s) 521, 792, 1014
RsaI GTAC 5 cut(s) 77, 263, 1038, 1149, 1315
RsaNI GTAC 5 cut(s) 76, 262, 1037, 1148, 1314
RseI CAYNNNNRTG 3 cut(s) 705, 927, 1686
SalI GTCGAC 1 cut(s) 1765
SapI GCTCTTC 1 cut(s) 1551
SaqAI TTAA 5 cut(s) 593, 1434, 1443, 1575, 1710
SatI GCNGC 8 cut(s) 120, 528, 799, 1021, 1330, 1371, 1384, 1735
Sau3AI GATC 3 cut(s) 273, 1344, 1622
Sau96I GGNCC 7 cut(s) 144, 511, 619, 782, 840, 1004, 1529
SchI GAGTC 6 cut(s) 467, 719, 738, 941, 960, 1802
ScrFI CCNGG 4 cut(s) 515, 786, 1008, 1252
SduI GDGCHC 2 cut(s) 902, 1245
SfaNI GCATC 2 cut(s) 337, 400
SfcI CTRYAG 1 cut(s) 241
SinI GGWCC 1 cut(s) 144
SmiMI CAYNNNNRTG 3 cut(s) 705, 927, 1686
SmlI CTYRAG 1 cut(s) 1387
SmoI CTYRAG 1 cut(s) 1387
SphI GCATGC 3 cut(s) 192, 387, 391
Sse9I AATT 4 cut(s) 536, 728, 950, 1435
SseBI AGGCCT 1 cut(s) 580
SspMI CTAG 3 cut(s) 12, 936, 1145
StuI AGGCCT 1 cut(s) 580
StyD4I CCNGG 4 cut(s) 513, 784, 1006, 1250
TaaI ACNGT 7 cut(s) 282, 356, 548, 707, 929, 1036, 1247
TaiI ACGT 2 cut(s) 686, 908
TaqI TCGA 4 cut(s) 104, 276, 1621, 1766
TasI AATT 4 cut(s) 536, 728, 950, 1435
TatI WGTACW 3 cut(s) 261, 1147, 1313
TfiI GAWTC 3 cut(s) 378, 1162, 1657
Tru1I TTAA 5 cut(s) 593, 1434, 1443, 1575, 1710
Tru9I TTAA 5 cut(s) 593, 1434, 1443, 1575, 1710
TscAI CASTG 4 cut(s) 96, 219, 313, 361
TseFI GTSAC 9 cut(s) 164, 210, 282, 304, 461, 732, 954, 1688, 1724
TseI GCWGC 8 cut(s) 119, 527, 798, 1020, 1329, 1370, 1383, 1734
Tsp45I GTSAC 9 cut(s) 164, 210, 282, 304, 461, 732, 954, 1688, 1724
TspGWI ACGGA 1 cut(s) 1646
TspRI CASTG 4 cut(s) 96, 219, 313, 361
Tth111I GACNNNGTC 3 cut(s) 521, 792, 1014
Van91I CCANNNNNTGG 1 cut(s) 1526
VpaK11BI GGWCC 1 cut(s) 144
XceI RCATGY 4 cut(s) 192, 268, 387, 391
XmiI GTMKAC 1 cut(s) 1766
XspI CTAG 3 cut(s) 12, 936, 1145
ZraI GACGTC 2 cut(s) 684, 906
Zsp2I ATGCAT 3 cut(s) 389, 393, 1572
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.