NatA auxiliary
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 3 cut(s) | 48, 176, 320 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 20 |
| AflII | CTTAAG | 1 cut(s) | 211 |
| AgsI | TTSAA | 2 cut(s) | 58, 100 |
| AluBI | AGCT | 3 cut(s) | 103, 229, 279 |
| AluI | AGCT | 3 cut(s) | 103, 229, 279 |
| Alw26I | GTCTC | 2 cut(s) | 21, 251 |
| Ama87I | CYCGRG | 1 cut(s) | 234 |
| AoxI | GGCC | 1 cut(s) | 240 |
| AvaI | CYCGRG | 1 cut(s) | 234 |
| BbsI | GAAGAC | 1 cut(s) | 54 |
| BclI | TGATCA | 1 cut(s) | 73 |
| BcoDI | GTCTC | 2 cut(s) | 21, 251 |
| BfaI | CTAG | 2 cut(s) | 15, 322 |
| BfrI | CTTAAG | 1 cut(s) | 211 |
| BglII | AGATCT | 1 cut(s) | 17 |
| BmcAI | AGTACT | 1 cut(s) | 320 |
| BmeT110I | CYCGRG | 1 cut(s) | 234 |
| BmrI | ACTGGG | 1 cut(s) | 199 |
| BmsI | GCATC | 2 cut(s) | 76, 302 |
| BmuI | ACTGGG | 1 cut(s) | 199 |
| BpiI | GAAGAC | 1 cut(s) | 54 |
| BsaI | GGTCTC | 2 cut(s) | 21, 251 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 20 |
| Bse118I | RCCGGY | 1 cut(s) | 242 |
| Bse1I | ACTGG | 1 cut(s) | 194 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 20 |
| BseMII | CTCAG | 1 cut(s) | 101 |
| BseNI | ACTGG | 1 cut(s) | 194 |
| BseRI | GAGGAG | 1 cut(s) | 75 |
| Bsh1285I | CGRYCG | 1 cut(s) | 115 |
| BshFI | GGCC | 1 cut(s) | 242 |
| BsiEI | CGRYCG | 1 cut(s) | 115 |
| BsiHKCI | CYCGRG | 1 cut(s) | 234 |
| BsiSI | CCGG | 1 cut(s) | 243 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 20 |
| BsmAI | GTCTC | 2 cut(s) | 21, 251 |
| BsnI | GGCC | 1 cut(s) | 242 |
| Bso31I | GGTCTC | 2 cut(s) | 21, 251 |
| BsoBI | CYCGRG | 1 cut(s) | 234 |
| Bsp143I | GATC | 3 cut(s) | 17, 73, 112 |
| BspANI | GGCC | 1 cut(s) | 242 |
| BspCNI | CTCAG | 1 cut(s) | 100 |
| BspHI | TCATGA | 1 cut(s) | 70 |
| BspTI | CTTAAG | 1 cut(s) | 211 |
| BspTNI | GGTCTC | 2 cut(s) | 21, 251 |
| BsrFI | RCCGGY | 1 cut(s) | 242 |
| BsrI | ACTGG | 1 cut(s) | 194 |
| BssAI | RCCGGY | 1 cut(s) | 242 |
| BssMI | GATC | 3 cut(s) | 17, 73, 112 |
| Bst4CI | ACNGT | 2 cut(s) | 51, 128 |
| Bst6I | CTCTTC | 1 cut(s) | 19 |
| BstAFI | CTTAAG | 1 cut(s) | 211 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 155 |
| BstC8I | GCNNGC | 1 cut(s) | 227 |
| BstDEI | CTNAG | 2 cut(s) | 87, 107 |
| BstKTI | GATC | 3 cut(s) | 20, 76, 115 |
| BstMAI | GTCTC | 2 cut(s) | 21, 251 |
| BstMBI | GATC | 3 cut(s) | 17, 73, 112 |
| BstMCI | CGRYCG | 1 cut(s) | 115 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 155, 222, 263 |
| BstNSI | RCATGY | 1 cut(s) | 47 |
| BstV2I | GAAGAC | 1 cut(s) | 54 |
| BstX2I | RGATCY | 1 cut(s) | 17 |
| BstYI | RGATCY | 1 cut(s) | 17 |
| BsuRI | GGCC | 1 cut(s) | 242 |
| BtsI | GCAGTG | 1 cut(s) | 151 |
| BtsIMutI | CAGTG | 2 cut(s) | 138, 151 |
| Cac8I | GCNNGC | 1 cut(s) | 227 |
| CciI | TCATGA | 1 cut(s) | 70 |
| Cfr10I | RCCGGY | 1 cut(s) | 242 |
| Csp6I | GTAC | 3 cut(s) | 47, 175, 319 |
| CviAII | CATG | 3 cut(s) | 44, 71, 155 |
| CviJI | RGCY | 6 cut(s) | 103, 168, 229, 242, 279, 308 |
| CviKI_1 | RGCY | 6 cut(s) | 103, 168, 229, 242, 279, 308 |
| CviQI | GTAC | 3 cut(s) | 47, 175, 319 |
| DdeI | CTNAG | 2 cut(s) | 87, 107 |
| DpnI | GATC | 3 cut(s) | 19, 75, 114 |
| DpnII | GATC | 3 cut(s) | 17, 73, 112 |
| Eam1104I | CTCTTC | 1 cut(s) | 19 |
| EarI | CTCTTC | 1 cut(s) | 19 |
| Eco31I | GGTCTC | 2 cut(s) | 21, 251 |
| Eco32I | GATATC | 1 cut(s) | 208 |
| Eco88I | CYCGRG | 1 cut(s) | 234 |
| EcoRV | GATATC | 1 cut(s) | 208 |
| FaeI | CATG | 3 cut(s) | 47, 74, 158 |
| FaiI | YATR | 5 cut(s) | 45, 72, 156, 282, 302 |
| FatI | CATG | 3 cut(s) | 43, 70, 154 |
| FbaI | TGATCA | 1 cut(s) | 73 |
| FspBI | CTAG | 2 cut(s) | 15, 322 |
| HaeIII | GGCC | 1 cut(s) | 242 |
| HapII | CCGG | 1 cut(s) | 243 |
| Hin1II | CATG | 3 cut(s) | 47, 74, 158 |
| HindIII | AAGCTT | 2 cut(s) | 101, 227 |
| HpaII | CCGG | 1 cut(s) | 243 |
| Hpy166II | GTNNAC | 1 cut(s) | 177 |
| Hpy188I | TCNGA | 2 cut(s) | 78, 90 |
| Hpy188III | TCNNGA | 3 cut(s) | 21, 71, 236 |
| Hpy8I | GTNNAC | 1 cut(s) | 177 |
| HpyCH4III | ACNGT | 2 cut(s) | 51, 128 |
| HpyCH4V | TGCA | 3 cut(s) | 149, 158, 293 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 155, 222, 263 |
| HpyF3I | CTNAG | 2 cut(s) | 87, 107 |
| Hsp92II | CATG | 3 cut(s) | 47, 74, 158 |
| Ksp22I | TGATCA | 1 cut(s) | 73 |
| Kzo9I | GATC | 3 cut(s) | 17, 73, 112 |
| LmnI | GCTCC | 1 cut(s) | 141 |
| LpnPI | CCDG | 4 cut(s) | 6, 175, 202, 256 |
| LweI | GCATC | 2 cut(s) | 76, 302 |
| MaeI | CTAG | 2 cut(s) | 15, 322 |
| MalI | GATC | 3 cut(s) | 19, 75, 114 |
| MboI | GATC | 3 cut(s) | 17, 73, 112 |
| MboII | GAAGA | 3 cut(s) | 36, 54, 215 |
| MflI | RGATCY | 1 cut(s) | 17 |
| MnlI | CCTC | 3 cut(s) | 96, 232, 277 |
| MseI | TTAA | 1 cut(s) | 212 |
| MspCI | CTTAAG | 1 cut(s) | 211 |
| MspI | CCGG | 1 cut(s) | 243 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 155, 222, 263 |
| NdeII | GATC | 3 cut(s) | 17, 73, 112 |
| NlaIII | CATG | 3 cut(s) | 47, 74, 158 |
| NspI | RCATGY | 1 cut(s) | 47 |
| PagI | TCATGA | 1 cut(s) | 70 |
| Ple19I | CGATCG | 1 cut(s) | 115 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 167, 199 |
| PsuI | RGATCY | 1 cut(s) | 17 |
| PvuI | CGATCG | 1 cut(s) | 115 |
| RsaI | GTAC | 3 cut(s) | 48, 176, 320 |
| RsaNI | GTAC | 3 cut(s) | 47, 175, 319 |
| SaqAI | TTAA | 1 cut(s) | 212 |
| Sau3AI | GATC | 3 cut(s) | 17, 73, 112 |
| ScaI | AGTACT | 1 cut(s) | 320 |
| SetI | ASST | 4 cut(s) | 16, 105, 231, 281 |
| SfaNI | GCATC | 2 cut(s) | 76, 302 |
| SmlI | CTYRAG | 1 cut(s) | 211 |
| SmoI | CTYRAG | 1 cut(s) | 211 |
| SspMI | CTAG | 2 cut(s) | 15, 322 |
| TaaI | ACNGT | 2 cut(s) | 51, 128 |
| TaqI | TCGA | 2 cut(s) | 7, 253 |
| TatI | WGTACW | 2 cut(s) | 46, 318 |
| Tru1I | TTAA | 1 cut(s) | 212 |
| Tru9I | TTAA | 1 cut(s) | 212 |
| TscAI | CASTG | 2 cut(s) | 138, 151 |
| TspDTI | ATGAA | 1 cut(s) | 143 |
| TspRI | CASTG | 2 cut(s) | 138, 151 |
| Vha464I | CTTAAG | 1 cut(s) | 211 |
| XceI | RCATGY | 1 cut(s) | 47 |
| XspI | CTAG | 2 cut(s) | 15, 322 |
| ZrmI | AGTACT | 1 cut(s) | 320 |