pycom07g09960

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0000179
Physical Location & Seq
Reverse (-)
9599078 .. 9602087
3010 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g09960.2

Sequence Viewer

Length: 1959 bp
ATGGTATTTTTCAAATGTTTTAAGAGCAACACCATTACCATTCTTGCGAAGGAAAATGATTCGCAAGATAGGGGAACAACTCTGAAGATTTACGCCCCACTGACTGGCCTTAAGGCGCTTGCTCTTCCTACAAAAGACAACTCCATGCATATTAAGTCGTGGTCTTCTGAAGTATCTTGGAAGGTGGCAAACTTTGTTCGATCAAATACGAAGAGGGAGGCGTGCACACCGGGGATTCTTATCTTGAACCCTTCACACCATGCTCATGACAGTCATCCGGCTTCGTTTAAGCTTCTCGGAGATCACATCCGCAGCGGAGCTATGGCTTGGAATGATGCCTTGTCGACTACCGGAGAAGCTGTTTTTGATGAGTCTTATTGGGAGTGGCTTGAAGATGTCTTGGGCCGATCTAAACATGTGCTTACTAGCATGGGCCTTTACCATGCCGTGTACGCATCTTTGTTTAGTTATGATCTCCATCATTCTGTCCTTCATGCGTTCTTCGAGCATTGGTGTTCAGCGACTAACACGCTTCATACAGCTCAAGGAGAGATGTCAATTTCACTTTGGGATCTCCACAAGATAGGGGGATTGCCAATCCAAGGTAAGTTTTATGACGAGGTCGTTCCTAGTGCGGAGGAACTTTCTCTCTGCAATAACCGAGGATTGCCTGCGAGTTGTCGCTGTTTATTTTGGGCATATCACAAGCTTTTCCAAGATGCTCGAAGTAAATCAGGCGTGAAGATTTCTTCATGGATCCGCTTCTGGTATTGGGAGGACACAAGGTACAAGAAGTCCTCGAAGAGAAGAAGTTGCAACAAAACCACTAAGCCAAAGGGAGACTCATATCCATCTGGTGCCATTGGTTCAGCTAGGCGCCGTTCCCCTGCCGAGTTGAGAGCGTTTGAGGACCTTGGCATAGCATCAGAGCATTTTGTTTTTCCAATCGGCGACGTCAACTTTGTTCGTCCTGGGGTTTTCAAAGTTGCTAGCAAGATGGCTGCAGGTGAATCTTTCAGTCTTGCTATCCCGGTTTTGGCCAATATTTATAATGGCTTGAGTGTTGTTTCGAACTCAGCAAACACTGAAGATCGTGCCGCGGTTCTTCCCTACCATTATGTGTATGGTTGGTTGGGTATTTATTCTTATACGGAGATGCTATTTGGAGGCGACCTACCCACAGGCGAGGAGATTGGGGATCCACCTGGTACAGAGCTTATCCCAAGTTCGTCAAGTTTCCCAAGTTTGCCGTGTGTAGGTGGAGGCATGCAAGATCCCGTCATGCATTCTACACCTTTGCCAGCTAGCTCTGAGATCTCTCTGAGAGGGCCAAACCTTAGTGGTACTGAGCAGCTTATTCATCGCATCAATCTTCGTGCGGCAATGGATATCAAGAGCCATATTGAGGGGAGGATTTTGAAATGCCCGTCGGAGGACCTTGCGTTGCTTAAAGAGGACTTGTCGAAACTTATTTCTGCAATTGACAATCTTAACATTGATTCTTCATCCTTGAAGATCAAGATCGCCGAAATTATGGCCGCCTCAACTGAGTATTCTTCCTTGCGTGTTATTTCCTCGAAGAAGTTGAGTCCAGATGTTAGAGCTCACCAACTTGCTGCAATAGACTTGTCACTAACCCAAGCCCGGTCTTCTCAGCAAGCTGCTTCGGGAGATTATCAATCTACAGAGACTTCTTTAGCTTCTGTCCGGGTACATCTAGATACGTTGATGCGAGAACAAGAACAGCTTGGCATCGAGGCATCAAAACTTGAAAGTGTTCTCGGGGAGCAGGGAGCTACACTTTCTCAATGCCAAGAGGAGATTTCACGCCTAGAACAAGAGAAAGACATGGCTATGGAGTTGCCCATCCTGTCTCTCACTGAGGTAGAGACTTTGAAGGCTTTGGAAGGCTTGCTTGAAGACCGCCTCCTTAGTTTTAGGGACATAGTTTTCAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

653

Amino Acids

72.09

Weight (kDa)

6.14

Isoelectric Point (pI)

54.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1050
AarI CACCTGC 1 cut(s) 995
AatII GACGTC 1 cut(s) 957
Acc36I ACCTGC 1 cut(s) 995
AccB1I GGYRCC 2 cut(s) 857, 876
AccB7I CCANNNNNTGG 1 cut(s) 104
AccI GTMKAC 1 cut(s) 344
AccII CGCG 1 cut(s) 1100
AciI CCGC 9 cut(s) 310, 315, 635, 760, 1098, 1100, 1379, 1539, 1924
AclWI GGATC 6 cut(s) 579, 751, 764, 1193, 1206, 1268
AcoI YGGCCR 2 cut(s) 1038, 1536
AcuI CTGAAG 3 cut(s) 104, 189, 1107
AcyI GRCGYC 2 cut(s) 877, 954
AfaI GTAC 5 cut(s) 452, 788, 1210, 1345, 1713
AfiI CCNNNNNNNGG 7 cut(s) 104, 602, 1036, 1256, 1405, 1432, 1644
AflII CTTAAG 1 cut(s) 110
AflIII ACRYGT 1 cut(s) 415
AjnI CCWGG 2 cut(s) 970, 1204
Alw21I GWGCWC 2 cut(s) 227, 1606
Alw26I GTCTC 4 cut(s) 834, 1682, 1878, 1883
Alw44I GTGCAC 1 cut(s) 223
AlwI GGATC 6 cut(s) 579, 751, 764, 1193, 1206, 1268
Ama87I CYCGRG 1 cut(s) 1781
AoxI GGCC 6 cut(s) 106, 403, 433, 1038, 1328, 1536
ApaLI GTGCAC 1 cut(s) 223
ApeKI GCWGC 5 cut(s) 312, 1001, 1351, 1616, 1661
ArsI GACNNNNNNTTYG 2 cut(s) 944, 976
Asp700I GAANNNNTTC 1 cut(s) 1776
AspLEI GCGC 2 cut(s) 118, 879
AspS9I GGNCC 5 cut(s) 403, 433, 910, 1328, 1435
AsuC2I CCSGG 4 cut(s) 231, 1031, 1645, 1709
AsuHPI GGTGA 2 cut(s) 1019, 1598
AsuII TTCGAA 1 cut(s) 1070
AsuNHI GCTAGC 2 cut(s) 989, 1304
AvaI CYCGRG 1 cut(s) 1781
AvaII GGWCC 2 cut(s) 910, 1435
BaeGI GKGCMC 1 cut(s) 227
BalI TGGCCA 1 cut(s) 1040
BamHI GGATCC 2 cut(s) 756, 1198
BanI GGYRCC 2 cut(s) 857, 876
BanII GRGCYC 1 cut(s) 1606
BbsI GAAGAC 3 cut(s) 156, 1641, 1926
Bbv12I GWGCWC 2 cut(s) 227, 1606
BbvI GCAGC 5 cut(s) 324, 988, 1363, 1603, 1648
BccI CCATC 4 cut(s) 486, 859, 991, 1874
BceAI ACGGC 3 cut(s) 431, 864, 1234
BciT130I CCWGG 2 cut(s) 972, 1206
BcnI CCSGG 4 cut(s) 231, 1031, 1645, 1709
BcoDI GTCTC 4 cut(s) 834, 1682, 1878, 1883
BfaI CTAG 7 cut(s) 426, 630, 873, 990, 1305, 1718, 1832
BfmI CTRYAG 2 cut(s) 1002, 1683
BfoI RGCGCY 2 cut(s) 119, 880
BfrI CTTAAG 1 cut(s) 110
BfuAI ACCTGC 1 cut(s) 995
BglII AGATCT 1 cut(s) 1314
BisI GCNGC 8 cut(s) 313, 1002, 1098, 1352, 1380, 1539, 1617, 1662
BlsI GCNGC 8 cut(s) 314, 1003, 1099, 1353, 1381, 1540, 1618, 1663
Bme1390I CCNGG 6 cut(s) 231, 972, 1031, 1206, 1645, 1709
Bme18I GGWCC 2 cut(s) 910, 1435
BmeT110I CYCGRG 1 cut(s) 1781
BmgT120I GGNCC 5 cut(s) 403, 433, 910, 1328, 1435
BmiI GGNNCC 4 cut(s) 758, 859, 878, 1200
BmrFI CCNGG 6 cut(s) 231, 972, 1031, 1206, 1645, 1709
BmsI GCATC 9 cut(s) 325, 464, 709, 932, 1146, 1374, 1719, 1761, 1769
BmtI GCTAGC 2 cut(s) 993, 1308
BpiI GAAGAC 3 cut(s) 156, 1641, 1926
Bpu14I TTCGAA 1 cut(s) 1070
BpuEI CTTGAG 2 cut(s) 528, 1078
BpuMI CCSGG 4 cut(s) 231, 1031, 1645, 1709
BsaBI GATNNNNATC 3 cut(s) 239, 477, 1520
BsaHI GRCGYC 2 cut(s) 877, 954
BsaJI CCNNGG 6 cut(s) 230, 601, 661, 913, 971, 1098
BsaWI WCCGGW 1 cut(s) 350
BsaXI ACNNNNNCTCC 2 cut(s) 345, 375
Bsc4I CCNNNNNNNGG 7 cut(s) 104, 602, 1036, 1256, 1405, 1432, 1644
Bse1I ACTGG 1 cut(s) 109
Bse3DI GCAATG 1 cut(s) 1389
Bse8I GATNNNNATC 3 cut(s) 239, 477, 1520
BseBI CCWGG 2 cut(s) 972, 1206
BseDI CCNNGG 6 cut(s) 230, 601, 661, 913, 971, 1098
BseGI GGATG 4 cut(s) 274, 306, 1505, 1866
BseJI GATNNNNATC 3 cut(s) 239, 477, 1520
BseLI CCNNNNNNNGG 7 cut(s) 104, 602, 1036, 1256, 1405, 1432, 1644
BseMI GCAATG 1 cut(s) 1389
BseMII CTCAG 7 cut(s) 1089, 1302, 1313, 1338, 1539, 1667, 1872
BseNI ACTGG 1 cut(s) 109
BseRI GAGGAG 2 cut(s) 1202, 1832
BseSI GKGCMC 1 cut(s) 227
BseXI GCAGC 5 cut(s) 324, 988, 1363, 1603, 1648
Bsh1236I CGCG 1 cut(s) 1100
BshFI GGCC 6 cut(s) 108, 405, 435, 1040, 1330, 1538
BshNI GGYRCC 2 cut(s) 857, 876
BsiHKAI GWGCWC 2 cut(s) 227, 1606
BsiHKCI CYCGRG 1 cut(s) 1781
BsiSI CCGG 6 cut(s) 230, 278, 351, 1031, 1645, 1708
BslFI GGGAC 1 cut(s) 1955
BslI CCNNNNNNNGG 7 cut(s) 104, 602, 1036, 1256, 1405, 1432, 1644
BsmAI GTCTC 4 cut(s) 834, 1682, 1878, 1883
BsmFI GGGAC 1 cut(s) 1955
BsmI GAATGC 1 cut(s) 1285
BsnI GGCC 6 cut(s) 108, 405, 435, 1040, 1330, 1538
BsoBI CYCGRG 1 cut(s) 1781
Bsp119I TTCGAA 1 cut(s) 1070
Bsp1286I GDGCHC 2 cut(s) 227, 1606
BspACI CCGC 9 cut(s) 310, 315, 635, 760, 1098, 1100, 1379, 1539, 1924
BspANI GGCC 6 cut(s) 108, 405, 435, 1040, 1330, 1538
BspCNI CTCAG 7 cut(s) 1088, 1303, 1314, 1339, 1540, 1666, 1873
BspFNI CGCG 1 cut(s) 1100
BspHI TCATGA 1 cut(s) 265
BspLI GGNNCC 4 cut(s) 758, 859, 878, 1200
BspMAI CTGCAG 1 cut(s) 1006
BspMI ACCTGC 1 cut(s) 995
BspOI GCTAGC 2 cut(s) 993, 1308
BspPI GGATC 6 cut(s) 579, 751, 764, 1193, 1206, 1268
BspQI GCTCTTC 1 cut(s) 129
BspT104I TTCGAA 1 cut(s) 1070
BspT107I GGYRCC 2 cut(s) 857, 876
BspTI CTTAAG 1 cut(s) 110
BsrDI GCAATG 1 cut(s) 1389
BsrI ACTGG 1 cut(s) 109
BssECI CCNNGG 6 cut(s) 230, 601, 661, 913, 971, 1098
BssNI GRCGYC 2 cut(s) 877, 954
BssT1I CCWWGG 2 cut(s) 601, 913
Bst2UI CCWGG 2 cut(s) 972, 1206
Bst4CI ACNGT 1 cut(s) 272
Bst6I CTCTTC 3 cut(s) 129, 206, 797
BstACI GRCGYC 2 cut(s) 877, 954
BstAFI CTTAAG 1 cut(s) 110
BstBI TTCGAA 1 cut(s) 1070
BstC8I GCNNGC 9 cut(s) 120, 223, 672, 991, 1268, 1302, 1306, 1659, 1913
BstDSI CCRYGG 1 cut(s) 1098
BstF5I GGATG 4 cut(s) 274, 306, 1505, 1866
BstFNI CGCG 1 cut(s) 1100
BstH2I RGCGCY 2 cut(s) 119, 880
BstHHI GCGC 2 cut(s) 118, 879
BstMAI GTCTC 4 cut(s) 834, 1682, 1878, 1883
BstMWI GCNNNNNNNGC 1 cut(s) 452
BstNI CCWGG 2 cut(s) 972, 1206
BstNSI RCATGY 2 cut(s) 419, 1270
BstSCI CCNGG 6 cut(s) 229, 970, 1029, 1204, 1643, 1707
BstSFI CTRYAG 2 cut(s) 1002, 1683
BstSLI GKGCMC 1 cut(s) 227
BstUI CGCG 1 cut(s) 1100
BstV1I GCAGC 5 cut(s) 324, 988, 1363, 1603, 1648
BstV2I GAAGAC 3 cut(s) 156, 1641, 1926
BstX2I RGATCY 5 cut(s) 571, 756, 1198, 1273, 1314
BstYI RGATCY 5 cut(s) 571, 756, 1198, 1273, 1314
BsuRI GGCC 6 cut(s) 108, 405, 435, 1040, 1330, 1538
BtgI CCRYGG 1 cut(s) 1098
BtgZI GCGATG 1 cut(s) 1346
BtsCI GGATG 4 cut(s) 274, 306, 1505, 1866
BtsIMutI CAGTG 3 cut(s) 98, 1083, 1878
BveI ACCTGC 1 cut(s) 995
Cac8I GCNNGC 9 cut(s) 120, 223, 672, 991, 1268, 1302, 1306, 1659, 1913
CciI TCATGA 1 cut(s) 265
CfoI GCGC 2 cut(s) 118, 879
Cfr13I GGNCC 5 cut(s) 403, 433, 910, 1328, 1435
Cfr42I CCGCGG 1 cut(s) 1101
CsiI ACCWGGT 1 cut(s) 1204
Csp6I GTAC 5 cut(s) 451, 787, 1209, 1344, 1712
CviQI GTAC 5 cut(s) 451, 787, 1209, 1344, 1712
DinI GGCGCC 1 cut(s) 878
EaeI YGGCCR 2 cut(s) 1038, 1536
Eam1104I CTCTTC 3 cut(s) 129, 206, 797
EarI CTCTTC 3 cut(s) 129, 206, 797
Ecl136II GAGCTC 1 cut(s) 1604
Eco130I CCWWGG 2 cut(s) 601, 913
Eco24I GRGCYC 1 cut(s) 1606
Eco32I GATATC 1 cut(s) 1390
Eco47I GGWCC 2 cut(s) 910, 1435
Eco53kI GAGCTC 1 cut(s) 1604
Eco57I CTGAAG 3 cut(s) 104, 189, 1107
Eco88I CYCGRG 1 cut(s) 1781
EcoICRI GAGCTC 1 cut(s) 1604
EcoO109I RGGNCCY 2 cut(s) 910, 1435
EcoRII CCWGG 2 cut(s) 970, 1204
EcoRV GATATC 1 cut(s) 1390
EcoT14I CCWWGG 2 cut(s) 601, 913
EcoT22I ATGCAT 2 cut(s) 150, 1287
EcoT38I GRGCYC 1 cut(s) 1606
EgeI GGCGCC 1 cut(s) 878
EheI GGCGCC 1 cut(s) 878
ErhI CCWWGG 2 cut(s) 601, 913
FalI AAGNNNNNCTT 4 cut(s) 1731, 1763, 1899, 1931
FaqI GGGAC 1 cut(s) 1955
FblI GTMKAC 1 cut(s) 344
Fnu4HI GCNGC 8 cut(s) 313, 1002, 1098, 1352, 1380, 1539, 1617, 1662
FokI GGATG 4 cut(s) 261, 293, 1492, 1853
FriOI GRGCYC 1 cut(s) 1606
Fsp4HI GCNGC 8 cut(s) 313, 1002, 1098, 1352, 1380, 1539, 1617, 1662
FspBI CTAG 7 cut(s) 426, 630, 873, 990, 1305, 1718, 1832
GlaI GCGC 2 cut(s) 117, 878
GluI GCNGC 8 cut(s) 313, 1002, 1098, 1352, 1380, 1539, 1617, 1662
HaeII RGCGCY 2 cut(s) 119, 880
HaeIII GGCC 6 cut(s) 108, 405, 435, 1040, 1330, 1538
HapII CCGG 6 cut(s) 230, 278, 351, 1031, 1645, 1708
HhaI GCGC 2 cut(s) 118, 879
Hin1I GRCGYC 2 cut(s) 877, 954
Hin6I GCGC 2 cut(s) 116, 877
HinP1I GCGC 2 cut(s) 116, 877
HincII GTYRAC 2 cut(s) 345, 958
HindII GTYRAC 2 cut(s) 345, 958
HindIII AAGCTT 2 cut(s) 290, 707
HinfI GANTC 7 cut(s) 59, 235, 371, 842, 1010, 1499, 1588
HpaII CCGG 6 cut(s) 230, 278, 351, 1031, 1645, 1708
HphI GGTGA 2 cut(s) 1019, 1598
Hpy166II GTNNAC 4 cut(s) 225, 345, 451, 958
Hpy188I TCNGA 7 cut(s) 84, 169, 299, 928, 1312, 1323, 1432
Hpy188III TCNNGA 7 cut(s) 244, 266, 1393, 1519, 1592, 1668, 1718
Hpy8I GTNNAC 4 cut(s) 225, 345, 451, 958
Hpy99I CGWCG 2 cut(s) 956, 1432
HpyAV CCTTC 6 cut(s) 43, 175, 261, 500, 1891, 1901
HpyCH4III ACNGT 1 cut(s) 272
HpyCH4IV ACGT 2 cut(s) 954, 1724
HpyCH4V TGCA 9 cut(s) 148, 225, 654, 816, 1004, 1270, 1285, 1478, 1619
HpyF10VI GCNNNNNNNGC 1 cut(s) 452
HpySE526I ACGT 2 cut(s) 954, 1724
Hsp92I GRCGYC 2 cut(s) 877, 954
HspAI GCGC 2 cut(s) 116, 877
KasI GGCGCC 1 cut(s) 876
KspI CCGCGG 1 cut(s) 1101
LguI GCTCTTC 1 cut(s) 129
LmnI GCTCC 3 cut(s) 317, 1786, 1793
Lsp1109I GCAGC 5 cut(s) 324, 988, 1363, 1603, 1648
LweI GCATC 9 cut(s) 325, 464, 709, 932, 1146, 1374, 1719, 1761, 1769
MabI ACCWGGT 1 cut(s) 1204
MaeI CTAG 7 cut(s) 426, 630, 873, 990, 1305, 1718, 1832
MaeII ACGT 2 cut(s) 954, 1724
MaeIII GTNAC 1 cut(s) 1629
MfeI CAATTG 1 cut(s) 1479
MflI RGATCY 5 cut(s) 571, 756, 1198, 1273, 1314
MhlI GDGCHC 2 cut(s) 227, 1606
MlsI TGGCCA 1 cut(s) 1040
MluCI AATT 3 cut(s) 558, 1479, 1530
MluNI TGGCCA 1 cut(s) 1040
Mly113I GGCGCC 1 cut(s) 877
MlyI GAGTC 3 cut(s) 380, 836, 1597
MmeI TCCRAC 1 cut(s) 1410
Mox20I TGGCCA 1 cut(s) 1040
Mph1103I ATGCAT 2 cut(s) 150, 1287
MroXI GAANNNNTTC 1 cut(s) 1776
MscI TGGCCA 1 cut(s) 1040
MseI TTAA 6 cut(s) 21, 111, 153, 288, 1449, 1491
MslI CAYNNNNRTG 2 cut(s) 264, 1853
Msp20I TGGCCA 1 cut(s) 1040
MspA1I CMGCKG 2 cut(s) 315, 1100
MspCI CTTAAG 1 cut(s) 110
MspI CCGG 6 cut(s) 230, 278, 351, 1031, 1645, 1708
MspR9I CCNGG 6 cut(s) 231, 972, 1031, 1206, 1645, 1709
MunI CAATTG 1 cut(s) 1479
Mva1269I GAATGC 1 cut(s) 1285
MvaI CCWGG 2 cut(s) 972, 1206
MvnI CGCG 1 cut(s) 1100
MwoI GCNNNNNNNGC 1 cut(s) 452
NarI GGCGCC 1 cut(s) 877
NciI CCSGG 4 cut(s) 231, 1031, 1645, 1709
NheI GCTAGC 2 cut(s) 989, 1304
NlaIV GGNNCC 4 cut(s) 758, 859, 878, 1200
NmeAIII GCCGAG 1 cut(s) 916
NmuCI GTSAC 1 cut(s) 1629
NsiI ATGCAT 2 cut(s) 150, 1287
NspI RCATGY 2 cut(s) 419, 1270
NspV TTCGAA 1 cut(s) 1070
PaeI GCATGC 1 cut(s) 1270
PagI TCATGA 1 cut(s) 265
PaqCI CACCTGC 1 cut(s) 995
PciI ACATGT 1 cut(s) 415
PciSI GCTCTTC 1 cut(s) 129
PctI GAATGC 1 cut(s) 1285
PdmI GAANNNNTTC 1 cut(s) 1776
PfeI GAWTC 4 cut(s) 59, 235, 1010, 1499
PflFI GACNNNGTC 1 cut(s) 620
PflMI CCANNNNNTGG 1 cut(s) 104
PkrI GCNGC 8 cut(s) 314, 1003, 1099, 1353, 1381, 1540, 1618, 1663
PleI GAGTC 3 cut(s) 379, 836, 1596
PluTI GGCGCC 1 cut(s) 880
PpsI GAGTC 3 cut(s) 379, 836, 1596
PpuMI RGGWCCY 2 cut(s) 910, 1435
PscI ACATGT 1 cut(s) 415
PsiI TTATAA 1 cut(s) 1050
Psp124BI GAGCTC 1 cut(s) 1606
Psp5II RGGWCCY 2 cut(s) 910, 1435
Psp6I CCWGG 2 cut(s) 970, 1204
PspGI CCWGG 2 cut(s) 970, 1204
PspN4I GGNNCC 4 cut(s) 758, 859, 878, 1200
PspPI GGNCC 5 cut(s) 403, 433, 910, 1328, 1435
PspPPI RGGWCCY 2 cut(s) 910, 1435
PstI CTGCAG 1 cut(s) 1006
PsuI RGATCY 5 cut(s) 571, 756, 1198, 1273, 1314
PsyI GACNNNGTC 1 cut(s) 620
RsaI GTAC 5 cut(s) 452, 788, 1210, 1345, 1713
RsaNI GTAC 5 cut(s) 451, 787, 1209, 1344, 1712
RseI CAYNNNNRTG 2 cut(s) 264, 1853
SacI GAGCTC 1 cut(s) 1606
SacII CCGCGG 1 cut(s) 1101
SalI GTCGAC 1 cut(s) 343
SapI GCTCTTC 1 cut(s) 129
SaqAI TTAA 6 cut(s) 21, 111, 153, 288, 1449, 1491
SatI GCNGC 8 cut(s) 313, 1002, 1098, 1352, 1380, 1539, 1617, 1662
Sau96I GGNCC 5 cut(s) 403, 433, 910, 1328, 1435
SchI GAGTC 3 cut(s) 380, 836, 1597
ScrFI CCNGG 6 cut(s) 231, 972, 1031, 1206, 1645, 1709
SduI GDGCHC 2 cut(s) 227, 1606
SexAI ACCWGGT 1 cut(s) 1204
SfaNI GCATC 9 cut(s) 325, 464, 709, 932, 1146, 1374, 1719, 1761, 1769
SfcI CTRYAG 2 cut(s) 1002, 1683
SfoI GGCGCC 1 cut(s) 878
Sfr303I CCGCGG 1 cut(s) 1101
SfuI TTCGAA 1 cut(s) 1070
SgrBI CCGCGG 1 cut(s) 1101
SinI GGWCC 2 cut(s) 910, 1435
SmiMI CAYNNNNRTG 2 cut(s) 264, 1853
SmlI CTYRAG 3 cut(s) 110, 543, 1057
SmoI CTYRAG 3 cut(s) 110, 543, 1057
SphI GCATGC 1 cut(s) 1270
Sse9I AATT 3 cut(s) 558, 1479, 1530
SsiI CCGC 9 cut(s) 310, 315, 635, 760, 1098, 1100, 1379, 1539, 1924
SspDI GGCGCC 1 cut(s) 876
SspI AATATT 1 cut(s) 1045
SspMI CTAG 7 cut(s) 426, 630, 873, 990, 1305, 1718, 1832
SstI GAGCTC 1 cut(s) 1606
StyD4I CCNGG 6 cut(s) 229, 970, 1029, 1204, 1643, 1707
StyI CCWWGG 2 cut(s) 601, 913
TaaI ACNGT 1 cut(s) 272
TaiI ACGT 2 cut(s) 957, 1727
TaqI TCGA 9 cut(s) 199, 344, 504, 724, 800, 1070, 1463, 1577, 1755
TasI AATT 3 cut(s) 558, 1479, 1530
TauI GCSGC 3 cut(s) 1100, 1382, 1541
TfiI GAWTC 4 cut(s) 59, 235, 1010, 1499
Tru1I TTAA 6 cut(s) 21, 111, 153, 288, 1449, 1491
Tru9I TTAA 6 cut(s) 21, 111, 153, 288, 1449, 1491
TscAI CASTG 3 cut(s) 105, 1090, 1885
TseFI GTSAC 1 cut(s) 1629
TseI GCWGC 5 cut(s) 312, 1001, 1351, 1616, 1661
Tsp45I GTSAC 1 cut(s) 1629
TspDTI ATGAA 5 cut(s) 482, 524, 741, 1349, 1494
TspGWI ACGGA 1 cut(s) 1166
TspRI CASTG 3 cut(s) 105, 1090, 1885
Tth111I GACNNNGTC 1 cut(s) 620
Van91I CCANNNNNTGG 1 cut(s) 104
Vha464I CTTAAG 1 cut(s) 110
VneI GTGCAC 1 cut(s) 223
VpaK11BI GGWCC 2 cut(s) 910, 1435
XbaI TCTAGA 1 cut(s) 1717
XceI RCATGY 2 cut(s) 419, 1270
XcmI CCANNNNNNNNNTGG 1 cut(s) 1121
XmiI GTMKAC 1 cut(s) 344
XmnI GAANNNNTTC 1 cut(s) 1776
XspI CTAG 7 cut(s) 426, 630, 873, 990, 1305, 1718, 1832
ZraI GACGTC 1 cut(s) 955
Zsp2I ATGCAT 2 cut(s) 150, 1287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.