pycom10g06840

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0000179
Physical Location & Seq
Reverse (-)
8008583 .. 8010940
2358 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g06840.3

Sequence Viewer

Length: 1308 bp
ATGGTATTTTTCAAATGTTTTAAGAGCAACACCATCACCATTCTCGCGAAGGAAAATGATTCGCAAGATAGGGGAACAACGCTGAAGATTTACGCCCCACTGACTGGCCTTAAGGCGCTTGCTCTTCCTACAAAAGACAACTTCATGCATATTAAGTCGTGGTCTTCTGAAGTATCTTGGAAGGTGGCAGACTTTGTTCGATCAAATACGGAGAAGAAGGCGTGCACACTGAGGATTCTTATCTTGAACCCTTCGCACCATGCTCGTGACAATCATCCGGCTTCGTTTAAGCTTCTCGGAGATCATATCCGCAGCGGAGCTATGGCTTGGAATGATGTCTTGTCGACTACCGGAGAAGCTGTTTTTGCTAAGTCTTATTGGGAGTTGCTTGAAGATGTCTTGGGCCGATCTAAACATGTGCTTACTAGCATGGGCCTTTACCATGCCGTGTACGCATCTTTGTTTAGTTATGATCTCCATCATTCTGTCCTTCATGCGTTCTTCGAGCATTGGTGTTCAGCGACTAACACGCTTCATACAGCTCAAGGAGAGATGTCAATTTCACTTTGGGATCTCCACAAGATAGGGGGATTGCCAATCCAAGGTAAGTTTTATGACGAGGTCGTTCCTAGTGCGGAGGAACTTTCTCTCTGCAATAACCGAGGATTGCCTGCGAGTTGTCGCTGTTTATTTTGGGCATATCACAAGCTTTCCCAAGATGCTCGAGGTAAATCAGGCGTGAAGATTTCTTCATGGATCCGCTTCTGGTATTGGGAGGACACAAGGTACAAGAAGTCCTCGAAGAGAAGAAGTTGCAACAAAACCACTAAGCCAAAGGGAGACCCATATCCGTATGGTGCCATTGGTTCAGCTAGGCGCCGTTCCCCTGCCGAGTTGAGAGCGTTTGAGGACCTTGGCATAGCATCAGAGCATTTTGTTTTTCCAATCGGCGACGTCAACTTTGTTCGTCCTGGGGTTTTCAAAGTTGCTAGCAAGATGGCTGCAGGTGAATCTTTCAGTCTTGCTATCCCGGTTTTGGCCAATATTTATAACGGCTTGAGTGTTGTTTCGAACTCGGCAAACACTGAACGATCGTGCTGCGGTTCTTCCCTACCACTATGTGTATGGTTGGTTGGGTATTTATTCTTATACGGAGATGCTATTTGGAGGCGACCTACCTACAGGCGAGGAGATTGGAGATCCACCTGGTACAGAGCTTATCCCAAGTTCGTCAAGTTTCCCAAGTTTGCCGTGTGTAGGTGGAGGCATGCAAGATCCCGTCATGCGTTCTATACCTTTGCCAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

436

Amino Acids

49.43

Weight (kDa)

9.59

Isoelectric Point (pI)

51.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1050
AarI CACCTGC 1 cut(s) 995
AatII GACGTC 1 cut(s) 957
Acc36I ACCTGC 1 cut(s) 995
AccB1I GGYRCC 2 cut(s) 857, 876
AccB7I CCANNNNNTGG 1 cut(s) 104
AccI GTMKAC 1 cut(s) 344
AccII CGCG 1 cut(s) 47
AciI CCGC 5 cut(s) 310, 315, 635, 760, 1101
AclWI GGATC 5 cut(s) 579, 751, 764, 1194, 1269
AcoI YGGCCR 1 cut(s) 1038
AcuI CTGAAG 2 cut(s) 104, 189
AcyI GRCGYC 2 cut(s) 877, 954
AdeI CACNNNGTG 1 cut(s) 1121
AfaI GTAC 3 cut(s) 452, 788, 1211
AfiI CCNNNNNNNGG 4 cut(s) 104, 602, 1036, 1257
AflII CTTAAG 1 cut(s) 110
AflIII ACRYGT 1 cut(s) 415
AgsI TTSAA 4 cut(s) 13, 247, 392, 982
AjnI CCWGG 2 cut(s) 970, 1205
AluBI AGCT 8 cut(s) 292, 320, 359, 542, 709, 872, 1217, 1305
AluI AGCT 8 cut(s) 292, 320, 359, 542, 709, 872, 1217, 1305
Alw21I GWGCWC 1 cut(s) 227
Alw26I GTCTC 1 cut(s) 834
Alw44I GTGCAC 1 cut(s) 223
AlwI GGATC 5 cut(s) 579, 751, 764, 1194, 1269
Ama87I CYCGRG 1 cut(s) 723
AoxI GGCC 4 cut(s) 106, 403, 433, 1038
ApaLI GTGCAC 1 cut(s) 223
ApeKI GCWGC 3 cut(s) 312, 1001, 1098
ArsI GACNNNNNNTTYG 2 cut(s) 944, 976
AspLEI GCGC 2 cut(s) 118, 879
AspS9I GGNCC 3 cut(s) 403, 433, 910
AsuC2I CCSGG 1 cut(s) 1031
AsuHPI GGTGA 2 cut(s) 28, 1019
AsuII TTCGAA 1 cut(s) 1070
AsuNHI GCTAGC 1 cut(s) 989
AvaI CYCGRG 1 cut(s) 723
AvaII GGWCC 1 cut(s) 910
BaeGI GKGCMC 1 cut(s) 227
BalI TGGCCA 1 cut(s) 1040
BamHI GGATCC 1 cut(s) 756
BanI GGYRCC 2 cut(s) 857, 876
BauI CACGAG 1 cut(s) 264
BbsI GAAGAC 1 cut(s) 156
Bbv12I GWGCWC 1 cut(s) 227
BbvI GCAGC 3 cut(s) 324, 988, 1085
BccI CCATC 3 cut(s) 41, 486, 991
BceAI ACGGC 4 cut(s) 431, 864, 1069, 1235
BcgI CGANNNNNNTGC 4 cut(s) 245, 279, 1080, 1114
BciT130I CCWGG 2 cut(s) 972, 1207
BcnI CCSGG 1 cut(s) 1031
BcoDI GTCTC 1 cut(s) 834
BfaI CTAG 5 cut(s) 426, 630, 873, 990, 1306
BfmI CTRYAG 2 cut(s) 1002, 1180
BfoI RGCGCY 2 cut(s) 119, 880
BfrI CTTAAG 1 cut(s) 110
BfuAI ACCTGC 1 cut(s) 995
BisI GCNGC 3 cut(s) 313, 1002, 1099
BlsI GCNGC 3 cut(s) 314, 1003, 1100
Bme1390I CCNGG 3 cut(s) 972, 1031, 1207
Bme18I GGWCC 1 cut(s) 910
BmeT110I CYCGRG 1 cut(s) 723
BmgT120I GGNCC 3 cut(s) 403, 433, 910
BmiI GGNNCC 3 cut(s) 758, 859, 878
BmrFI CCNGG 3 cut(s) 972, 1031, 1207
BmsI GCATC 4 cut(s) 464, 709, 932, 1147
BmtI GCTAGC 1 cut(s) 993
BpiI GAAGAC 1 cut(s) 156
Bpu14I TTCGAA 1 cut(s) 1070
BpuEI CTTGAG 2 cut(s) 528, 1078
BpuMI CCSGG 1 cut(s) 1031
BsaBI GATNNNNATC 2 cut(s) 239, 477
BsaHI GRCGYC 2 cut(s) 877, 954
BsaI GGTCTC 1 cut(s) 834
BsaJI CCNNGG 4 cut(s) 601, 661, 913, 971
BsaWI WCCGGW 1 cut(s) 350
BsaXI ACNNNNNCTCC 2 cut(s) 345, 375
Bsc4I CCNNNNNNNGG 4 cut(s) 104, 602, 1036, 1257
Bse1I ACTGG 1 cut(s) 109
Bse8I GATNNNNATC 2 cut(s) 239, 477
BseBI CCWGG 2 cut(s) 972, 1207
BseDI CCNNGG 4 cut(s) 601, 661, 913, 971
BseGI GGATG 1 cut(s) 274
BseJI GATNNNNATC 2 cut(s) 239, 477
BseLI CCNNNNNNNGG 4 cut(s) 104, 602, 1036, 1257
BseMII CTCAG 1 cut(s) 221
BseNI ACTGG 1 cut(s) 109
BseRI GAGGAG 1 cut(s) 1203
BseSI GKGCMC 1 cut(s) 227
BseXI GCAGC 3 cut(s) 324, 988, 1085
Bsh1236I CGCG 1 cut(s) 47
Bsh1285I CGRYCG 1 cut(s) 1094
BshFI GGCC 4 cut(s) 108, 405, 435, 1040
BshNI GGYRCC 2 cut(s) 857, 876
BsiEI CGRYCG 1 cut(s) 1094
BsiHKAI GWGCWC 1 cut(s) 227
BsiHKCI CYCGRG 1 cut(s) 723
BsiSI CCGG 3 cut(s) 278, 351, 1031
BslI CCNNNNNNNGG 4 cut(s) 104, 602, 1036, 1257
BsmAI GTCTC 1 cut(s) 834
BsnI GGCC 4 cut(s) 108, 405, 435, 1040
Bso31I GGTCTC 1 cut(s) 834
BsoBI CYCGRG 1 cut(s) 723
Bsp119I TTCGAA 1 cut(s) 1070
Bsp1286I GDGCHC 1 cut(s) 227
Bsp143I GATC 9 cut(s) 200, 301, 407, 472, 571, 756, 1091, 1199, 1274
Bsp68I TCGCGA 1 cut(s) 47
BspACI CCGC 5 cut(s) 310, 315, 635, 760, 1101
BspANI GGCC 4 cut(s) 108, 405, 435, 1040
BspCNI CTCAG 1 cut(s) 222
BspFNI CGCG 1 cut(s) 47
BspLI GGNNCC 3 cut(s) 758, 859, 878
BspMAI CTGCAG 1 cut(s) 1006
BspMI ACCTGC 1 cut(s) 995
BspOI GCTAGC 1 cut(s) 993
BspPI GGATC 5 cut(s) 579, 751, 764, 1194, 1269
BspQI GCTCTTC 1 cut(s) 129
BspT104I TTCGAA 1 cut(s) 1070
BspT107I GGYRCC 2 cut(s) 857, 876
BspTI CTTAAG 1 cut(s) 110
BspTNI GGTCTC 1 cut(s) 834
BsrI ACTGG 1 cut(s) 109
BssECI CCNNGG 4 cut(s) 601, 661, 913, 971
BssMI GATC 9 cut(s) 200, 301, 407, 472, 571, 756, 1091, 1199, 1274
BssNI GRCGYC 2 cut(s) 877, 954
BssSI CACGAG 1 cut(s) 264
BssT1I CCWWGG 2 cut(s) 601, 913
Bst2BI CACGAG 1 cut(s) 264
Bst2UI CCWGG 2 cut(s) 972, 1207
Bst6I CTCTTC 2 cut(s) 129, 797
BstACI GRCGYC 2 cut(s) 877, 954
BstAFI CTTAAG 1 cut(s) 110
BstBI TTCGAA 1 cut(s) 1070
BstC8I GCNNGC 6 cut(s) 120, 223, 672, 991, 1269, 1303
BstDEI CTNAG 3 cut(s) 230, 369, 828
BstF5I GGATG 1 cut(s) 274
BstFNI CGCG 1 cut(s) 47
BstH2I RGCGCY 2 cut(s) 119, 880
BstHHI GCGC 2 cut(s) 118, 879
BstKTI GATC 9 cut(s) 203, 304, 410, 475, 574, 759, 1094, 1202, 1277
BstMAI GTCTC 1 cut(s) 834
BstMBI GATC 9 cut(s) 200, 301, 407, 472, 571, 756, 1091, 1199, 1274
BstMCI CGRYCG 1 cut(s) 1094
BstMWI GCNNNNNNNGC 2 cut(s) 365, 452
BstNI CCWGG 2 cut(s) 972, 1207
BstNSI RCATGY 2 cut(s) 419, 1271
BstSCI CCNGG 3 cut(s) 970, 1029, 1205
BstSFI CTRYAG 2 cut(s) 1002, 1180
BstSLI GKGCMC 1 cut(s) 227
BstUI CGCG 1 cut(s) 47
BstV1I GCAGC 3 cut(s) 324, 988, 1085
BstV2I GAAGAC 1 cut(s) 156
BstX2I RGATCY 4 cut(s) 571, 756, 1199, 1274
BstYI RGATCY 4 cut(s) 571, 756, 1199, 1274
BsuRI GGCC 4 cut(s) 108, 405, 435, 1040
BtsCI GGATG 1 cut(s) 274
BtsIMutI CAGTG 3 cut(s) 98, 227, 1083
BtuMI TCGCGA 1 cut(s) 47
BveI ACCTGC 1 cut(s) 995
Cac8I GCNNGC 6 cut(s) 120, 223, 672, 991, 1269, 1303
CfoI GCGC 2 cut(s) 118, 879
Cfr13I GGNCC 3 cut(s) 403, 433, 910
CsiI ACCWGGT 1 cut(s) 1205
Csp6I GTAC 3 cut(s) 451, 787, 1210
CviAII CATG 9 cut(s) 145, 260, 416, 430, 443, 494, 753, 1268, 1283
CviQI GTAC 3 cut(s) 451, 787, 1210
DdeI CTNAG 3 cut(s) 230, 369, 828
DinI GGCGCC 1 cut(s) 878
DpnI GATC 9 cut(s) 202, 303, 409, 474, 573, 758, 1093, 1201, 1276
DpnII GATC 9 cut(s) 200, 301, 407, 472, 571, 756, 1091, 1199, 1274
DraIII CACNNNGTG 1 cut(s) 1121
EaeI YGGCCR 1 cut(s) 1038
Eam1104I CTCTTC 2 cut(s) 129, 797
EarI CTCTTC 2 cut(s) 129, 797
Eco130I CCWWGG 2 cut(s) 601, 913
Eco31I GGTCTC 1 cut(s) 834
Eco47I GGWCC 1 cut(s) 910
Eco57I CTGAAG 2 cut(s) 104, 189
Eco88I CYCGRG 1 cut(s) 723
EcoO109I RGGNCCY 1 cut(s) 910
EcoRII CCWGG 2 cut(s) 970, 1205
EcoT14I CCWWGG 2 cut(s) 601, 913
EcoT22I ATGCAT 1 cut(s) 150
EgeI GGCGCC 1 cut(s) 878
EheI GGCGCC 1 cut(s) 878
ErhI CCWWGG 2 cut(s) 601, 913
FaeI CATG 9 cut(s) 148, 263, 419, 433, 446, 497, 756, 1271, 1286
FatI CATG 9 cut(s) 144, 259, 415, 429, 442, 493, 752, 1267, 1282
FblI GTMKAC 1 cut(s) 344
Fnu4HI GCNGC 3 cut(s) 313, 1002, 1099
FokI GGATG 1 cut(s) 261
Fsp4HI GCNGC 3 cut(s) 313, 1002, 1099
FspBI CTAG 5 cut(s) 426, 630, 873, 990, 1306
GlaI GCGC 2 cut(s) 117, 878
GluI GCNGC 3 cut(s) 313, 1002, 1099
HaeII RGCGCY 2 cut(s) 119, 880
HaeIII GGCC 4 cut(s) 108, 405, 435, 1040
HapII CCGG 3 cut(s) 278, 351, 1031
HhaI GCGC 2 cut(s) 118, 879
Hin1I GRCGYC 2 cut(s) 877, 954
Hin1II CATG 9 cut(s) 148, 263, 419, 433, 446, 497, 756, 1271, 1286
Hin6I GCGC 2 cut(s) 116, 877
HinP1I GCGC 2 cut(s) 116, 877
HincII GTYRAC 2 cut(s) 345, 958
HindII GTYRAC 2 cut(s) 345, 958
HindIII AAGCTT 2 cut(s) 290, 707
HinfI GANTC 3 cut(s) 59, 235, 1010
HpaII CCGG 3 cut(s) 278, 351, 1031
HphI GGTGA 2 cut(s) 28, 1019
Hpy166II GTNNAC 4 cut(s) 225, 345, 451, 958
Hpy188I TCNGA 3 cut(s) 169, 299, 928
Hpy188III TCNNGA 3 cut(s) 46, 244, 266
Hpy8I GTNNAC 4 cut(s) 225, 345, 451, 958
Hpy99I CGWCG 1 cut(s) 956
HpyAV CCTTC 5 cut(s) 43, 175, 211, 261, 500
HpyCH4IV ACGT 1 cut(s) 954
HpyCH4V TGCA 6 cut(s) 148, 225, 654, 816, 1004, 1271
HpyF10VI GCNNNNNNNGC 2 cut(s) 365, 452
HpyF3I CTNAG 3 cut(s) 230, 369, 828
HpySE526I ACGT 1 cut(s) 954
Hsp92I GRCGYC 2 cut(s) 877, 954
Hsp92II CATG 9 cut(s) 148, 263, 419, 433, 446, 497, 756, 1271, 1286
HspAI GCGC 2 cut(s) 116, 877
KasI GGCGCC 1 cut(s) 876
Kzo9I GATC 9 cut(s) 200, 301, 407, 472, 571, 756, 1091, 1199, 1274
LguI GCTCTTC 1 cut(s) 129
LmnI GCTCC 1 cut(s) 317
Lsp1109I GCAGC 3 cut(s) 324, 988, 1085
LweI GCATC 4 cut(s) 464, 709, 932, 1147
MabI ACCWGGT 1 cut(s) 1205
MaeI CTAG 5 cut(s) 426, 630, 873, 990, 1306
MaeII ACGT 1 cut(s) 954
MaeIII GTNAC 1 cut(s) 266
MalI GATC 9 cut(s) 202, 303, 409, 474, 573, 758, 1093, 1201, 1276
MboI GATC 9 cut(s) 200, 301, 407, 472, 571, 756, 1091, 1199, 1274
MflI RGATCY 4 cut(s) 571, 756, 1199, 1274
MhlI GDGCHC 1 cut(s) 227
MlsI TGGCCA 1 cut(s) 1040
MluCI AATT 1 cut(s) 558
MluNI TGGCCA 1 cut(s) 1040
Mly113I GGCGCC 1 cut(s) 877
Mox20I TGGCCA 1 cut(s) 1040
Mph1103I ATGCAT 1 cut(s) 150
MscI TGGCCA 1 cut(s) 1040
MseI TTAA 4 cut(s) 21, 111, 153, 288
MslI CAYNNNNRTG 1 cut(s) 264
Msp20I TGGCCA 1 cut(s) 1040
MspA1I CMGCKG 1 cut(s) 315
MspCI CTTAAG 1 cut(s) 110
MspI CCGG 3 cut(s) 278, 351, 1031
MspR9I CCNGG 3 cut(s) 972, 1031, 1207
MvaI CCWGG 2 cut(s) 972, 1207
MvnI CGCG 1 cut(s) 47
MwoI GCNNNNNNNGC 2 cut(s) 365, 452
NarI GGCGCC 1 cut(s) 877
NciI CCSGG 1 cut(s) 1031
NdeII GATC 9 cut(s) 200, 301, 407, 472, 571, 756, 1091, 1199, 1274
NheI GCTAGC 1 cut(s) 989
NlaIII CATG 9 cut(s) 148, 263, 419, 433, 446, 497, 756, 1271, 1286
NlaIV GGNNCC 3 cut(s) 758, 859, 878
NmeAIII GCCGAG 2 cut(s) 916, 1055
NmuCI GTSAC 1 cut(s) 266
NruI TCGCGA 1 cut(s) 47
NsiI ATGCAT 1 cut(s) 150
NspI RCATGY 2 cut(s) 419, 1271
NspV TTCGAA 1 cut(s) 1070
PaeI GCATGC 1 cut(s) 1271
PaeR7I CTCGAG 1 cut(s) 723
PaqCI CACCTGC 1 cut(s) 995
PciI ACATGT 1 cut(s) 415
PciSI GCTCTTC 1 cut(s) 129
PfeI GAWTC 3 cut(s) 59, 235, 1010
PflFI GACNNNGTC 1 cut(s) 620
PflMI CCANNNNNTGG 1 cut(s) 104
PkrI GCNGC 3 cut(s) 314, 1003, 1100
Ple19I CGATCG 1 cut(s) 1094
PluTI GGCGCC 1 cut(s) 880
PpuMI RGGWCCY 1 cut(s) 910
PscI ACATGT 1 cut(s) 415
PsiI TTATAA 1 cut(s) 1050
Psp5II RGGWCCY 1 cut(s) 910
Psp6I CCWGG 2 cut(s) 970, 1205
PspGI CCWGG 2 cut(s) 970, 1205
PspN4I GGNNCC 3 cut(s) 758, 859, 878
PspPI GGNCC 3 cut(s) 403, 433, 910
PspPPI RGGWCCY 1 cut(s) 910
PspXI VCTCGAGB 1 cut(s) 723
PstI CTGCAG 1 cut(s) 1006
PsuI RGATCY 4 cut(s) 571, 756, 1199, 1274
PsyI GACNNNGTC 1 cut(s) 620
PvuI CGATCG 1 cut(s) 1094
RruI TCGCGA 1 cut(s) 47
RsaI GTAC 3 cut(s) 452, 788, 1211
RsaNI GTAC 3 cut(s) 451, 787, 1210
RseI CAYNNNNRTG 1 cut(s) 264
SalI GTCGAC 1 cut(s) 343
SapI GCTCTTC 1 cut(s) 129
SaqAI TTAA 4 cut(s) 21, 111, 153, 288
SatI GCNGC 3 cut(s) 313, 1002, 1099
Sau3AI GATC 9 cut(s) 200, 301, 407, 472, 571, 756, 1091, 1199, 1274
Sau96I GGNCC 3 cut(s) 403, 433, 910
ScrFI CCNGG 3 cut(s) 972, 1031, 1207
SduI GDGCHC 1 cut(s) 227
SexAI ACCWGGT 1 cut(s) 1205
SfaNI GCATC 4 cut(s) 464, 709, 932, 1147
SfcI CTRYAG 2 cut(s) 1002, 1180
SfoI GGCGCC 1 cut(s) 878
Sfr274I CTCGAG 1 cut(s) 723
SfuI TTCGAA 1 cut(s) 1070
SinI GGWCC 1 cut(s) 910
SlaI CTCGAG 1 cut(s) 723
SmiMI CAYNNNNRTG 1 cut(s) 264
SmlI CTYRAG 4 cut(s) 110, 543, 723, 1057
SmoI CTYRAG 4 cut(s) 110, 543, 723, 1057
SphI GCATGC 1 cut(s) 1271
Sse9I AATT 1 cut(s) 558
SsiI CCGC 5 cut(s) 310, 315, 635, 760, 1101
SspDI GGCGCC 1 cut(s) 876
SspI AATATT 1 cut(s) 1045
SspMI CTAG 5 cut(s) 426, 630, 873, 990, 1306
StyD4I CCNGG 3 cut(s) 970, 1029, 1205
StyI CCWWGG 2 cut(s) 601, 913
TaiI ACGT 1 cut(s) 957
TaqI TCGA 6 cut(s) 199, 344, 504, 724, 800, 1070
TasI AATT 1 cut(s) 558
TfiI GAWTC 3 cut(s) 59, 235, 1010
Tru1I TTAA 4 cut(s) 21, 111, 153, 288
Tru9I TTAA 4 cut(s) 21, 111, 153, 288
TscAI CASTG 3 cut(s) 105, 234, 1090
TseFI GTSAC 1 cut(s) 266
TseI GCWGC 3 cut(s) 312, 1001, 1098
Tsp45I GTSAC 1 cut(s) 266
TspDTI ATGAA 4 cut(s) 133, 482, 524, 741
TspGWI ACGGA 3 cut(s) 224, 840, 1167
TspRI CASTG 3 cut(s) 105, 234, 1090
Tth111I GACNNNGTC 1 cut(s) 620
Van91I CCANNNNNTGG 1 cut(s) 104
Vha464I CTTAAG 1 cut(s) 110
VneI GTGCAC 1 cut(s) 223
VpaK11BI GGWCC 1 cut(s) 910
XceI RCATGY 2 cut(s) 419, 1271
XcmI CCANNNNNNNNNTGG 1 cut(s) 1122
XhoI CTCGAG 1 cut(s) 723
XmiI GTMKAC 1 cut(s) 344
XspI CTAG 5 cut(s) 426, 630, 873, 990, 1306
ZraI GACGTC 1 cut(s) 955
Zsp2I ATGCAT 1 cut(s) 150
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.