Rmu_sc0001438.1_g000034

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001438.1
OG0000179
Physical Location & Seq
Forward (+)
135880 .. 137628
1749 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001438.1_g000034.1.cds

Sequence Viewer

Length: 1407 bp
atgttgtggaggcatcttggcaagggcgggaacgtggcttcccggcgacggatttgcttcttccggataccgttgcgtagcttgaacatagggctacaagatggatgtcgcggcactcgcgctcacgcttctcgtccttttgtggccatggctttcttcaagtgcttcaagagagggacagtcaccatcctcgagggtccggaggacactcaaagtgatggcactactctgcaggtgtatccatcgttgactgggcctcaagcaattgatgtccctccttgtgacctttcagctcacatcctccagtggactcatgtggcacctcgccaactagctaaacaaagatctggccacgacaaacaaagctcaaacgtgttgctgttgaagtcttcgcatcatgatcagaacaacctcaggtcccgttcacgcttctcagctatcgtatatgcaacggttcagaatggcaagcttacccgggaagccggtctctatcgaccgatattcgcttcactattcagctatgatcgtgttgcacttgtcatacgggctttctgtgagtattggtgtcctacgacgaataccctccacacttctagcagggaaatgtccatctccctctgggatttggatcaacttggaggtttgcccattgccggacgattttatgatgaggttattccagctgctgaagagctttcggcaacaagcaaagggagtcaacagagccgctatttgtttctctcctaccataagctttgcaaggaaggtcaagggcataaagtgaagataacttcatggatacgatactggtatagaggagctttgcactataagaggcctccgaacaaaagcaccaggaacaaaagagatccgtccccgaatgcgtttaatccatctggcaagatccatgagatccgacaacgaactcctgcagaccttgcagtatttgatgacttaggcatggagggtgaagatatagaccccacctatttggctgcctttcttgcttgttggttgtgcctgtttgttttacccagagacaacaccggtttgattcgtccgggggtattcaaagttgccagcaaaatgtcacagggtctaaaattttgcctagcagtaccggtgttggctagcatttatcagggtttgaacgagatctctgttttcagtgatccatgtaattgttcagctgctctttcttttcattatatatacgtatggctagcagagtactttggcacccactttcaatctccacttcccaaagacctaaggccttgtatggttcacttcttcggagaattttcagctaagcattttgaggattcacaggctttttctgtagtgacccgagagaggggtcccacagcgccgcgagccaatgataaaccgacatgtcacgaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

468

Amino Acids

52.79

Weight (kDa)

9.32

Isoelectric Point (pI)

53.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 223
AbsI CCTCGAGG 1 cut(s) 191
Acc36I ACCTGC 1 cut(s) 223
AccB1I GGYRCC 2 cut(s) 319, 1238
AccII CGCG 3 cut(s) 111, 120, 1375
AccIII TCCGGA 2 cut(s) 63, 199
AciI CCGC 4 cut(s) 27, 111, 727, 1373
AclWI GGATC 5 cut(s) 636, 863, 898, 907, 1166
AcoI YGGCCR 2 cut(s) 144, 349
AcsI RAATTY 2 cut(s) 1103, 1301
AcuI CTGAAG 1 cut(s) 708
AfaI GTAC 2 cut(s) 1119, 1232
AfiI CCNNNNNNNGG 4 cut(s) 48, 653, 1356, 1357
AflIII ACRYGT 2 cut(s) 372, 1394
AgeI ACCGGT 2 cut(s) 1046, 1120
AgsI TTSAA 7 cut(s) 85, 160, 169, 385, 1072, 1150, 1250
AjnI CCWGG 1 cut(s) 854
AloI GAACNNNNNNTCC 2 cut(s) 23, 55
Alw26I GTCTC 2 cut(s) 491, 1032
AlwI GGATC 5 cut(s) 636, 863, 898, 907, 1166
AlwNI CAGNNNCTG 1 cut(s) 686
Ama87I CYCGRG 3 cut(s) 191, 474, 1350
Aor13HI TCCGGA 2 cut(s) 63, 199
AoxI GGCC 5 cut(s) 144, 254, 349, 836, 1274
ApeKI GCWGC 3 cut(s) 683, 995, 1190
ApoI RAATTY 2 cut(s) 1103, 1301
AsiGI ACCGGT 2 cut(s) 1046, 1120
AspLEI GCGC 2 cut(s) 122, 1372
AspS9I GGNCC 4 cut(s) 197, 254, 417, 1361
AsuC2I CCSGG 4 cut(s) 43, 475, 476, 1062
AsuHPI GGTGA 2 cut(s) 175, 980
AsuNHI GCTAGC 2 cut(s) 1130, 1222
AvaI CYCGRG 3 cut(s) 191, 474, 1350
AvaII GGWCC 3 cut(s) 197, 417, 1361
AxyI CCTNAGG 2 cut(s) 413, 1271
BalI TGGCCA 2 cut(s) 146, 351
BanI GGYRCC 2 cut(s) 319, 1238
BbsI GAAGAC 1 cut(s) 381
BbvI GCAGC 3 cut(s) 670, 982, 1177
BccI CCATC 6 cut(s) 95, 194, 212, 250, 617, 901
BcgI CGANNNNNNTGC 2 cut(s) 36, 70
BciT130I CCWGG 1 cut(s) 856
BciVI GTATCC 3 cut(s) 60, 249, 792
BclI TGATCA 1 cut(s) 400
BcnI CCSGG 4 cut(s) 43, 475, 476, 1062
BcoDI GTCTC 2 cut(s) 491, 1032
BfaI CTAG 5 cut(s) 332, 594, 1112, 1131, 1223
BfmI CTRYAG 3 cut(s) 230, 930, 1341
BfoI RGCGCY 1 cut(s) 1373
BfuAI ACCTGC 1 cut(s) 223
BfuI GTATCC 3 cut(s) 60, 249, 792
BglII AGATCT 2 cut(s) 344, 1155
BisI GCNGC 6 cut(s) 112, 684, 727, 996, 1191, 1373
BlpI GCTNAGC 1 cut(s) 1311
BlsI GCNGC 6 cut(s) 113, 685, 728, 997, 1192, 1374
BmcAI AGTACT 1 cut(s) 1232
Bme1390I CCNGG 5 cut(s) 43, 475, 476, 856, 1062
Bme18I GGWCC 3 cut(s) 197, 417, 1361
BmeT110I CYCGRG 3 cut(s) 191, 474, 1350
BmgT120I GGNCC 4 cut(s) 197, 254, 417, 1361
BmiI GGNNCC 6 cut(s) 198, 321, 419, 1240, 1362, 1363
BmrFI CCNGG 5 cut(s) 43, 475, 476, 856, 1062
BmrI ACTGGG 1 cut(s) 261
BmsI GCATC 2 cut(s) 22, 403
BmtI GCTAGC 2 cut(s) 1134, 1226
BmuI ACTGGG 1 cut(s) 261
BpiI GAAGAC 1 cut(s) 381
BpmI CTGGAG 1 cut(s) 287
Bpu1102I GCTNAGC 1 cut(s) 1311
BpuEI CTTGAG 1 cut(s) 243
BpuMI CCSGG 4 cut(s) 43, 475, 476, 1062
BsaAI YACGTR 1 cut(s) 1216
BsaBI GATNNNNATC 1 cut(s) 627
BsaI GGTCTC 1 cut(s) 491
BsaJI CCNNGG 3 cut(s) 147, 474, 1061
BsaWI WCCGGW 4 cut(s) 63, 199, 1046, 1120
Bsc4I CCNNNNNNNGG 4 cut(s) 48, 653, 1356, 1357
Bse118I RCCGGY 3 cut(s) 482, 1046, 1120
Bse1I ACTGG 3 cut(s) 256, 304, 812
Bse21I CCTNAGG 2 cut(s) 413, 1271
Bse3DI GCAATG 1 cut(s) 648
Bse8I GATNNNNATC 1 cut(s) 627
BseAI TCCGGA 2 cut(s) 63, 199
BseBI CCWGG 1 cut(s) 856
BseDI CCNNGG 3 cut(s) 147, 474, 1061
BseGI GGATG 3 cut(s) 110, 186, 297
BseJI GATNNNNATC 1 cut(s) 627
BseLI CCNNNNNNNGG 4 cut(s) 48, 653, 1356, 1357
BseMI GCAATG 1 cut(s) 648
BseMII CTCAG 2 cut(s) 427, 447
BseNI ACTGG 3 cut(s) 256, 304, 812
BseRI GAGGAG 1 cut(s) 831
BseXI GCAGC 3 cut(s) 670, 982, 1177
Bsh1236I CGCG 3 cut(s) 111, 120, 1375
Bsh1285I CGRYCG 1 cut(s) 497
BshFI GGCC 5 cut(s) 146, 256, 351, 838, 1276
BshNI GGYRCC 2 cut(s) 319, 1238
BshTI ACCGGT 2 cut(s) 1046, 1120
BsiEI CGRYCG 1 cut(s) 497
BsiHKCI CYCGRG 3 cut(s) 191, 474, 1350
BsiSI CCGG 9 cut(s) 43, 64, 200, 475, 483, 654, 1047, 1061, 1121
BslFI GGGAC 5 cut(s) 190, 257, 403, 859, 1347
BslI CCNNNNNNNGG 4 cut(s) 48, 653, 1356, 1357
BsmAI GTCTC 2 cut(s) 491, 1032
BsmFI GGGAC 5 cut(s) 190, 257, 403, 859, 1347
BsmI GAATGC 1 cut(s) 886
BsnI GGCC 5 cut(s) 146, 256, 351, 838, 1276
Bso31I GGTCTC 1 cut(s) 491
BsoBI CYCGRG 3 cut(s) 191, 474, 1350
Bsp13I TCCGGA 2 cut(s) 63, 199
Bsp143I GATC 9 cut(s) 344, 400, 523, 628, 868, 903, 912, 1155, 1171
Bsp1720I GCTNAGC 1 cut(s) 1311
Bsp19I CCATGG 1 cut(s) 147
BspACI CCGC 4 cut(s) 27, 111, 727, 1373
BspANI GGCC 5 cut(s) 146, 256, 351, 838, 1276
BspCNI CTCAG 2 cut(s) 426, 446
BspEI TCCGGA 2 cut(s) 63, 199
BspFNI CGCG 3 cut(s) 111, 120, 1375
BspHI TCATGA 1 cut(s) 397
BspLI GGNNCC 6 cut(s) 198, 321, 419, 1240, 1362, 1363
BspMAI CTGCAG 2 cut(s) 234, 934
BspMI ACCTGC 1 cut(s) 223
BspOI GCTAGC 2 cut(s) 1134, 1226
BspPI GGATC 5 cut(s) 636, 863, 898, 907, 1166
BspQI GCTCTTC 1 cut(s) 684
BspT107I GGYRCC 2 cut(s) 319, 1238
BspTNI GGTCTC 1 cut(s) 491
BsrDI GCAATG 1 cut(s) 648
BsrFI RCCGGY 3 cut(s) 482, 1046, 1120
BsrI ACTGG 3 cut(s) 256, 304, 812
BssAI RCCGGY 3 cut(s) 482, 1046, 1120
BssECI CCNNGG 3 cut(s) 147, 474, 1061
BssMI GATC 9 cut(s) 344, 400, 523, 628, 868, 903, 912, 1155, 1171
BssT1I CCWWGG 1 cut(s) 147
Bst2UI CCWGG 1 cut(s) 856
Bst4CI ACNGT 3 cut(s) 72, 181, 454
Bst6I CTCTTC 1 cut(s) 684
BstAPI GCANNNNNTGC 1 cut(s) 938
BstBAI YACGTR 1 cut(s) 1216
BstC8I GCNNGC 5 cut(s) 467, 1081, 1132, 1224, 1377
BstDEI CTNAG 5 cut(s) 413, 433, 955, 1271, 1311
BstDSI CCRYGG 1 cut(s) 147
BstF5I GGATG 3 cut(s) 110, 186, 297
BstFNI CGCG 3 cut(s) 111, 120, 1375
BstH2I RGCGCY 1 cut(s) 1373
BstHHI GCGC 2 cut(s) 122, 1372
BstKTI GATC 9 cut(s) 347, 403, 526, 631, 871, 906, 915, 1158, 1174
BstMAI GTCTC 2 cut(s) 491, 1032
BstMBI GATC 9 cut(s) 344, 400, 523, 628, 868, 903, 912, 1155, 1171
BstMCI CGRYCG 1 cut(s) 497
BstMWI GCNNNNNNNGC 4 cut(s) 117, 938, 1004, 1376
BstNI CCWGG 1 cut(s) 856
BstNSI RCATGY 1 cut(s) 1398
BstSCI CCNGG 5 cut(s) 41, 473, 474, 854, 1060
BstSFI CTRYAG 3 cut(s) 230, 930, 1341
BstSNI TACGTA 1 cut(s) 1216
BstUI CGCG 3 cut(s) 111, 120, 1375
BstV1I GCAGC 3 cut(s) 670, 982, 1177
BstV2I GAAGAC 1 cut(s) 381
BstX2I RGATCY 5 cut(s) 344, 868, 903, 912, 1155
BstXI CCANNNNNNTGG 1 cut(s) 991
BstYI RGATCY 5 cut(s) 344, 868, 903, 912, 1155
Bsu36I CCTNAGG 2 cut(s) 413, 1271
BsuI GTATCC 3 cut(s) 60, 249, 792
BsuRI GGCC 5 cut(s) 146, 256, 351, 838, 1276
BtgI CCRYGG 1 cut(s) 147
BtsCI GGATG 3 cut(s) 110, 186, 297
BtsIMutI CAGTG 2 cut(s) 311, 1174
BveI ACCTGC 1 cut(s) 223
Cac8I GCNNGC 5 cut(s) 467, 1081, 1132, 1224, 1377
CaiI CAGNNNCTG 1 cut(s) 686
CciI TCATGA 1 cut(s) 397
CfoI GCGC 2 cut(s) 122, 1372
Cfr10I RCCGGY 3 cut(s) 482, 1046, 1120
Cfr13I GGNCC 4 cut(s) 197, 254, 417, 1361
Cfr9I CCCGGG 1 cut(s) 474
Csp6I GTAC 2 cut(s) 1118, 1231
CspAI ACCGGT 2 cut(s) 1046, 1120
CviAII CATG 8 cut(s) 148, 314, 398, 795, 908, 961, 1176, 1395
CviQI GTAC 2 cut(s) 1118, 1231
DdeI CTNAG 5 cut(s) 413, 433, 955, 1271, 1311
DpnI GATC 9 cut(s) 346, 402, 525, 630, 870, 905, 914, 1157, 1173
DpnII GATC 9 cut(s) 344, 400, 523, 628, 868, 903, 912, 1155, 1171
EaeI YGGCCR 2 cut(s) 144, 349
Eam1104I CTCTTC 1 cut(s) 684
EarI CTCTTC 1 cut(s) 684
Eco105I TACGTA 1 cut(s) 1216
Eco130I CCWWGG 1 cut(s) 147
Eco147I AGGCCT 2 cut(s) 838, 1276
Eco31I GGTCTC 1 cut(s) 491
Eco47I GGWCC 3 cut(s) 197, 417, 1361
Eco57I CTGAAG 1 cut(s) 708
Eco81I CCTNAGG 2 cut(s) 413, 1271
Eco88I CYCGRG 3 cut(s) 191, 474, 1350
EcoO109I RGGNCCY 2 cut(s) 417, 1361
EcoRII CCWGG 1 cut(s) 854
EcoT14I CCWWGG 1 cut(s) 147
ErhI CCWWGG 1 cut(s) 147
FaeI CATG 8 cut(s) 151, 317, 401, 798, 911, 964, 1179, 1398
FaqI GGGAC 5 cut(s) 190, 257, 403, 859, 1347
FatI CATG 8 cut(s) 147, 313, 397, 794, 907, 960, 1175, 1394
FauI CCCGC 1 cut(s) 20
FbaI TGATCA 1 cut(s) 400
Fnu4HI GCNGC 6 cut(s) 112, 684, 727, 996, 1191, 1373
FokI GGATG 3 cut(s) 117, 173, 284
Fsp4HI GCNGC 6 cut(s) 112, 684, 727, 996, 1191, 1373
FspBI CTAG 5 cut(s) 332, 594, 1112, 1131, 1223
GlaI GCGC 2 cut(s) 121, 1371
GluI GCNGC 6 cut(s) 112, 684, 727, 996, 1191, 1373
GsuI CTGGAG 1 cut(s) 287
HaeII RGCGCY 1 cut(s) 1373
HaeIII GGCC 5 cut(s) 146, 256, 351, 838, 1276
HapII CCGG 9 cut(s) 43, 64, 200, 475, 483, 654, 1047, 1061, 1121
HhaI GCGC 2 cut(s) 122, 1372
Hin1II CATG 8 cut(s) 151, 317, 401, 798, 911, 964, 1179, 1398
Hin6I GCGC 2 cut(s) 120, 1370
HinP1I GCGC 2 cut(s) 120, 1370
HincII GTYRAC 2 cut(s) 249, 719
HindII GTYRAC 2 cut(s) 249, 719
HindIII AAGCTT 2 cut(s) 467, 752
HinfI GANTC 4 cut(s) 310, 715, 1054, 1325
HpaII CCGG 9 cut(s) 43, 64, 200, 475, 483, 654, 1047, 1061, 1121
HphI GGTGA 2 cut(s) 175, 980
Hpy166II GTNNAC 5 cut(s) 249, 309, 425, 719, 1288
Hpy188I TCNGA 5 cut(s) 405, 459, 843, 917, 1298
Hpy188III TCNNGA 5 cut(s) 64, 169, 200, 398, 1400
Hpy8I GTNNAC 5 cut(s) 249, 309, 425, 719, 1288
Hpy99I CGWCG 2 cut(s) 51, 577
HpyAV CCTTC 1 cut(s) 758
HpyCH4III ACNGT 3 cut(s) 72, 181, 454
HpyCH4IV ACGT 3 cut(s) 33, 372, 1215
HpyCH4V TGCA 7 cut(s) 232, 449, 533, 759, 826, 932, 941
HpyF10VI GCNNNNNNNGC 4 cut(s) 117, 938, 1004, 1376
HpyF3I CTNAG 5 cut(s) 413, 433, 955, 1271, 1311
HpySE526I ACGT 3 cut(s) 33, 372, 1215
Hsp92II CATG 8 cut(s) 151, 317, 401, 798, 911, 964, 1179, 1398
HspAI GCGC 2 cut(s) 120, 1370
KflI GGGWCCC 1 cut(s) 1361
Kpn2I TCCGGA 2 cut(s) 63, 199
Ksp22I TGATCA 1 cut(s) 400
Kzo9I GATC 9 cut(s) 344, 400, 523, 628, 868, 903, 912, 1155, 1171
LguI GCTCTTC 1 cut(s) 684
LmnI GCTCC 1 cut(s) 818
Lsp1109I GCAGC 3 cut(s) 670, 982, 1177
LweI GCATC 2 cut(s) 22, 403
MaeI CTAG 5 cut(s) 332, 594, 1112, 1131, 1223
MaeII ACGT 3 cut(s) 33, 372, 1215
MaeIII GTNAC 5 cut(s) 181, 281, 1089, 1345, 1397
MalI GATC 9 cut(s) 346, 402, 525, 630, 870, 905, 914, 1157, 1173
MboI GATC 9 cut(s) 344, 400, 523, 628, 868, 903, 912, 1155, 1171
MboII GAAGA 7 cut(s) 52, 148, 381, 701, 796, 983, 1285
MfeI CAATTG 1 cut(s) 264
MflI RGATCY 5 cut(s) 344, 868, 903, 912, 1155
MlsI TGGCCA 2 cut(s) 146, 351
MluCI AATT 4 cut(s) 264, 1103, 1180, 1301
MluNI TGGCCA 2 cut(s) 146, 351
MlyI GAGTC 2 cut(s) 304, 724
MmeI TCCRAC 1 cut(s) 940
Mox20I TGGCCA 2 cut(s) 146, 351
MroI TCCGGA 2 cut(s) 63, 199
MscI TGGCCA 2 cut(s) 146, 351
MseI TTAA 1 cut(s) 888
Msp20I TGGCCA 2 cut(s) 146, 351
MspA1I CMGCKG 2 cut(s) 683, 1190
MspI CCGG 9 cut(s) 43, 64, 200, 475, 483, 654, 1047, 1061, 1121
MspR9I CCNGG 5 cut(s) 43, 475, 476, 856, 1062
MunI CAATTG 1 cut(s) 264
Mva1269I GAATGC 1 cut(s) 886
MvaI CCWGG 1 cut(s) 856
MvnI CGCG 3 cut(s) 111, 120, 1375
MwoI GCNNNNNNNGC 4 cut(s) 117, 938, 1004, 1376
NciI CCSGG 4 cut(s) 43, 475, 476, 1062
NcoI CCATGG 1 cut(s) 147
NdeII GATC 9 cut(s) 344, 400, 523, 628, 868, 903, 912, 1155, 1171
NheI GCTAGC 2 cut(s) 1130, 1222
NlaIII CATG 8 cut(s) 151, 317, 401, 798, 911, 964, 1179, 1398
NlaIV GGNNCC 6 cut(s) 198, 321, 419, 1240, 1362, 1363
NmuCI GTSAC 5 cut(s) 181, 281, 1089, 1345, 1397
NspI RCATGY 1 cut(s) 1398
PaeR7I CTCGAG 1 cut(s) 191
PagI TCATGA 1 cut(s) 397
PaqCI CACCTGC 1 cut(s) 223
PceI AGGCCT 2 cut(s) 838, 1276
PciI ACATGT 1 cut(s) 1394
PciSI GCTCTTC 1 cut(s) 684
PctI GAATGC 1 cut(s) 886
PfeI GAWTC 2 cut(s) 1054, 1325
PinAI ACCGGT 2 cut(s) 1046, 1120
PkrI GCNGC 6 cut(s) 113, 685, 728, 997, 1192, 1374
PleI GAGTC 2 cut(s) 304, 723
PpsI GAGTC 2 cut(s) 304, 723
Ppu21I YACGTR 1 cut(s) 1216
PpuMI RGGWCCY 2 cut(s) 417, 1361
PscI ACATGT 1 cut(s) 1394
Psp5II RGGWCCY 2 cut(s) 417, 1361
Psp6I CCWGG 1 cut(s) 854
PspGI CCWGG 1 cut(s) 854
PspN4I GGNNCC 6 cut(s) 198, 321, 419, 1240, 1362, 1363
PspPI GGNCC 4 cut(s) 197, 254, 417, 1361
PspPPI RGGWCCY 2 cut(s) 417, 1361
PspXI VCTCGAGB 1 cut(s) 191
PstI CTGCAG 2 cut(s) 234, 934
PstNI CAGNNNCTG 1 cut(s) 686
PsuI RGATCY 5 cut(s) 344, 868, 903, 912, 1155
PvuII CAGCTG 2 cut(s) 683, 1190
RsaI GTAC 2 cut(s) 1119, 1232
RsaNI GTAC 2 cut(s) 1118, 1231
SapI GCTCTTC 1 cut(s) 684
SaqAI TTAA 1 cut(s) 888
SatI GCNGC 6 cut(s) 112, 684, 727, 996, 1191, 1373
Sau3AI GATC 9 cut(s) 344, 400, 523, 628, 868, 903, 912, 1155, 1171
Sau96I GGNCC 4 cut(s) 197, 254, 417, 1361
ScaI AGTACT 1 cut(s) 1232
SchI GAGTC 2 cut(s) 304, 724
ScrFI CCNGG 5 cut(s) 43, 475, 476, 856, 1062
SfaNI GCATC 2 cut(s) 22, 403
SfcI CTRYAG 3 cut(s) 230, 930, 1341
Sfr274I CTCGAG 1 cut(s) 191
SinI GGWCC 3 cut(s) 197, 417, 1361
SlaI CTCGAG 1 cut(s) 191
SmaI CCCGGG 1 cut(s) 476
SmlI CTYRAG 2 cut(s) 191, 258
SmoI CTYRAG 2 cut(s) 191, 258
SnaBI TACGTA 1 cut(s) 1216
Sse9I AATT 4 cut(s) 264, 1103, 1180, 1301
SseBI AGGCCT 2 cut(s) 838, 1276
SsiI CCGC 4 cut(s) 27, 111, 727, 1373
SspMI CTAG 5 cut(s) 332, 594, 1112, 1131, 1223
StuI AGGCCT 2 cut(s) 838, 1276
StyD4I CCNGG 5 cut(s) 41, 473, 474, 854, 1060
StyI CCWWGG 1 cut(s) 147
TaaI ACNGT 3 cut(s) 72, 181, 454
TaiI ACGT 3 cut(s) 36, 375, 1218
TaqI TCGA 2 cut(s) 192, 493
TaqII GACCGA 1 cut(s) 511
TasI AATT 4 cut(s) 264, 1103, 1180, 1301
TatI WGTACW 1 cut(s) 1230
TauI GCSGC 3 cut(s) 114, 729, 1375
TfiI GAWTC 2 cut(s) 1054, 1325
Tru1I TTAA 1 cut(s) 888
Tru9I TTAA 1 cut(s) 888
TscAI CASTG 2 cut(s) 311, 1174
TseFI GTSAC 5 cut(s) 181, 281, 1089, 1345, 1397
TseI GCWGC 3 cut(s) 683, 995, 1190
Tsp45I GTSAC 5 cut(s) 181, 281, 1089, 1345, 1397
TspDTI ATGAA 2 cut(s) 783, 1193
TspGWI ACGGA 2 cut(s) 64, 861
TspMI CCCGGG 1 cut(s) 474
TspRI CASTG 2 cut(s) 311, 1174
VpaK11BI GGWCC 3 cut(s) 197, 417, 1361
XapI RAATTY 2 cut(s) 1103, 1301
XceI RCATGY 1 cut(s) 1398
XhoI CTCGAG 1 cut(s) 191
XmaI CCCGGG 1 cut(s) 474
XspI CTAG 5 cut(s) 332, 594, 1112, 1131, 1223
ZrmI AGTACT 1 cut(s) 1232
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.