Rmu_sc0017791.1_g000007

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0017791.1
OG0000179
Physical Location & Seq
Forward (+)
16248 .. 24266
8019 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0017791.1_g000007.1.cds

Sequence Viewer

Length: 2655 bp
atgttggatcaatggctacctgataatataaagacacattatcatgttttgcaactgggtgatgatgtgtatgatgccatgttgaaccagacgaatgttggccattccaatatcaagttctatgtgcttcaaggcttgctgcacgtagcttactgcttccgctgggatcttgatctgacacgagttcttgattgtggcaacgctgagggtccgccaaaagcaattaggctttgcgtgtttatcgacgtcgagaagaacgtgaacgtcctaaacgcttggattcctccacctttgctcgtggtagggtccactaaaagcgctgctaaagagcttactgtagcaagtaaagggagtaaacagagctaccgctatttgtttctcgcctaccataagctttgcaaagaaggccaagggcaaaaagtgaagttaacttcacgggtacgatattggtatagaggagctttgcgctataagaggcctccaaacaaaagtaccaggaacaaaagagatccgccccagaatgtgtttaatccatctggtaggatccatgagatccgacagcgtacttctgcagaccttgcagtatttgatgacttaggcattgagggtgaagatgtagagcccacctatttggctgcctttcttgcttgttggttgtgtctgttcgttttacccagagacgacactggtttgattcgtccgggagtattcaaagttgccagcaagatgtcacagggtgtacagttttgcctagcagtaccagtgttggccaacatctatcagggtttaggcgagatttctgtttccagcgatccgggtaactgctcgactgcccttccttttcattatatatatgcatggctagcagagtactttggcacccattttcagtctccgcttcccaacgacctaaggccccgtatggttcgcttctctggagaattttcagctaaatattgtggggactcacaggcgctttctttgttcaatgcatgtgataatgtgaggatggatgcatttgctagggtatctttggagagcagagtgattatcaaccgcgagaacatctcccatttagacctcatatatctcatcagccttcgatctgggtatctttctctcaaacaggataaccgacgagtcattcagccatacagtccacatcggttcaatcgacagtttggttatgtccaagatgttcctggcagtcttaagaacgacattcgcaccagcgtattggctttgatttacaagcattgggattcttgcaccagaatgaacaccaagtgcgcgataacgttgccgacccagagtgctatcacggagtacatggttactcgagactatgtcgactggtggtctaaagtgtaccattctacaccagtgaaagcaacgaaagaagcgcctactagtagaccactgcacaagactctaaaagcaaaagaagataagaacgtcacccgtgcagcacctcctcatcataaaaatgtgattccttgtgaagttgaatgtagcaccaacgtccctgtgcctcctaatagggctttgctcccagataaggaccgtcaggctcatccagtcgacattctagaagatgatggagactctttagattctcacgtcgctttcatccgtccacttaagctgaaaagacctgtcatcaaagaaagaaggcgtagtggaggcagcggtagcaatgatagtgaagtgcactttaagcgtcgaaaaactgacaccagcctcggccctacttattgtgatcccaatgctgagttcactctgaatactgactttcttggtgacatctcaacttcttcgcaaccgatgttgcagcgaaatgagggcgcagagattgatggtcgttcactttggggaaacgatgacgcctctttagatcctatacgtgttccttctgcaacggaacttgaggcttacgctttacccatggaaggaaaatctaatgcaacgaatgactcacagcaaattgaccctacaggtccacttaccatggtgcatcctcctaagcctctgaacaccattgccttttctgaggcctctcttggtggagctgctattatagatgccagccaaagacttcgtgacattcgtcaacaagctgctactgcaatttgtgaacaaattgaagatatgataatgaagcactcctccaagaccattctttccagcaagggggaacttgacaagctgatagctgagcttagccattatgggattgatccttcatccgtaaggggaaaagttgaaggattgttgactagtgctgaccaatacaacctggcacggctttcttgttcatgcaaggctactgcaggcactcgtattcaacgtctggctgacacagagtcagaaattgcgaaggtcacttcaattcgtcaagctgactctgatcatcgtcaatctgcacttaagtctttggagaaattaaaggaggagcaacgaaaattggagcaaacagtgactttactagacgagagacttctactacaggagaagaagcttgtcgacctaaaaaaagaggagactcaaatccaagagacccccgaggtgaccacttcagagcttgagacgacaaaatcattgcgagatacttttgagaaccaccgcaatagcttcaagggtttgacttgggtgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

884

Amino Acids

99.39

Weight (kDa)

8.35

Isoelectric Point (pI)

46.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 249
AccB1I GGYRCC 1 cut(s) 878
AccI GTMKAC 4 cut(s) 1350, 1414, 1581, 2523
AccII CGCG 2 cut(s) 1059, 1292
AciI CCGC 8 cut(s) 160, 212, 367, 512, 896, 1057, 1689, 2623
AclI AACGTT 1 cut(s) 1298
AcoI YGGCCR 2 cut(s) 100, 768
AcsI RAATTY 1 cut(s) 941
AcuI CTGAAG 1 cut(s) 2559
AcyI GRCGYC 2 cut(s) 246, 1884
AdeI CACNNNGTG 2 cut(s) 737, 1287
AfaI GTAC 8 cut(s) 441, 493, 565, 741, 759, 872, 1328, 1370
AfeI AGCGCT 1 cut(s) 319
AfiI CCNNNNNNNGG 3 cut(s) 1558, 1949, 2190
AflII CTTAAG 3 cut(s) 1211, 1640, 2426
AflIII ACRYGT 1 cut(s) 1903
AhdI GACNNNNNGTC 2 cut(s) 1357, 2362
AhlI ACTAGT 2 cut(s) 1409, 2276
AjiI CACGTC 1 cut(s) 1621
AjnI CCWGG 3 cut(s) 494, 1201, 2295
AjuI GAANNNNNNNTTGG 4 cut(s) 101, 133, 1757, 1789
Alw21I GWGCWC 1 cut(s) 1713
Alw26I GTCTC 8 cut(s) 672, 897, 1335, 1596, 2488, 2534, 2549, 2579
Alw44I GTGCAC 1 cut(s) 1709
Ama87I CYCGRG 2 cut(s) 1338, 2561
Aor51HI AGCGCT 1 cut(s) 319
AoxI GGCC 7 cut(s) 100, 406, 476, 768, 914, 1744, 2052
ApaLI GTGCAC 1 cut(s) 1709
ApeKI GCWGC 8 cut(s) 139, 320, 635, 1466, 1686, 1831, 2069, 2117
ApoI RAATTY 1 cut(s) 941
AspLEI GCGC 6 cut(s) 320, 468, 976, 1292, 1405, 1847
AspS9I GGNCC 6 cut(s) 209, 306, 915, 1561, 1745, 1997
AsuC2I CCSGG 2 cut(s) 702, 816
AsuHPI GGTGA 5 cut(s) 71, 620, 1450, 1811, 2578
AsuNHI GCTAGC 1 cut(s) 862
AvaI CYCGRG 2 cut(s) 1338, 2561
AvaII GGWCC 4 cut(s) 209, 306, 1561, 1997
AxyI CCTNAGG 1 cut(s) 911
BaeGI GKGCMC 1 cut(s) 1713
BaeI ACNNNNGTAYC 2 cut(s) 475, 508
BalI TGGCCA 2 cut(s) 102, 770
BamHI GGATCC 1 cut(s) 543
BanI GGYRCC 1 cut(s) 878
BanII GRGCYC 1 cut(s) 624
BauI CACGAG 2 cut(s) 180, 296
Bbv12I GWGCWC 1 cut(s) 1713
BbvCI CCTCAGC 1 cut(s) 204
BbvI GCAGC 8 cut(s) 126, 307, 622, 1478, 1698, 1843, 2056, 2104
BccI CCATC 4 cut(s) 541, 1003, 1592, 1850
BceAI ACGGC 1 cut(s) 2318
BcgI CGANNNNNNTGC 2 cut(s) 1282, 1316
BciT130I CCWGG 3 cut(s) 496, 1203, 2297
BclI TGATCA 1 cut(s) 2407
BcnI CCSGG 2 cut(s) 702, 816
BcoDI GTCTC 8 cut(s) 672, 897, 1335, 1596, 2488, 2534, 2549, 2579
BcuI ACTAGT 2 cut(s) 1409, 2276
BfaI CTAG 7 cut(s) 752, 863, 1023, 1410, 1589, 2277, 2486
BfmI CTRYAG 5 cut(s) 336, 570, 1992, 2328, 2504
BfoI RGCGCY 3 cut(s) 321, 977, 1406
BfrI CTTAAG 3 cut(s) 1211, 1640, 2426
BisI GCNGC 8 cut(s) 140, 321, 636, 1467, 1687, 1832, 2070, 2118
BlpI GCTNAGC 2 cut(s) 2214, 2219
BlsI GCNGC 8 cut(s) 141, 322, 637, 1468, 1688, 1833, 2071, 2119
BmcAI AGTACT 1 cut(s) 872
Bme1390I CCNGG 5 cut(s) 496, 702, 816, 1203, 2297
Bme18I GGWCC 4 cut(s) 209, 306, 1561, 1997
BmeRI GACNNNNNGTC 2 cut(s) 1357, 2362
BmeT110I CYCGRG 2 cut(s) 1338, 2561
BmgBI CACGTC 1 cut(s) 1621
BmgT120I GGNCC 6 cut(s) 209, 306, 915, 1561, 1745, 1997
BmiI GGNNCC 5 cut(s) 210, 307, 545, 880, 917
BmrFI CCNGG 5 cut(s) 496, 702, 816, 1203, 2297
BmrI ACTGGG 1 cut(s) 65
BmsI GCATC 4 cut(s) 64, 1003, 2023, 2071
BmtI GCTAGC 1 cut(s) 866
BmuI ACTGGG 1 cut(s) 65
BoxI GACNNNNGTC 1 cut(s) 2106
BplI GAGNNNNNCTC 2 cut(s) 1052, 1084
BpmI CTGGAG 1 cut(s) 957
Bpu10I CCTNAGC 2 cut(s) 204, 2022
Bpu1102I GCTNAGC 2 cut(s) 2214, 2219
BpuEI CTTGAG 2 cut(s) 1946, 2603
BpuMI CCSGG 2 cut(s) 702, 816
BsaAI YACGTR 2 cut(s) 145, 1904
BsaBI GATNNNNATC 1 cut(s) 171
BsaHI GRCGYC 2 cut(s) 246, 1884
BsaI GGTCTC 1 cut(s) 2549
BsaJI CCNNGG 5 cut(s) 409, 1741, 1944, 2007, 2562
Bsc4I CCNNNNNNNGG 3 cut(s) 1558, 1949, 2190
Bse1I ACTGG 6 cut(s) 60, 691, 761, 1358, 1382, 1577
Bse21I CCTNAGG 1 cut(s) 911
Bse3DI GCAATG 3 cut(s) 1702, 2037, 2597
Bse8I GATNNNNATC 1 cut(s) 171
BseBI CCWGG 3 cut(s) 496, 1203, 2297
BseDI CCNNGG 5 cut(s) 409, 1741, 1944, 2007, 2562
BseGI GGATG 6 cut(s) 1014, 1018, 1573, 1629, 2014, 2243
BseJI GATNNNNATC 1 cut(s) 171
BseLI CCNNNNNNNGG 3 cut(s) 1558, 1949, 2190
BseMI GCAATG 3 cut(s) 1702, 2037, 2597
BseMII CTCAG 4 cut(s) 195, 1761, 2040, 2205
BseNI ACTGG 6 cut(s) 60, 691, 761, 1358, 1382, 1577
BseRI GAGGAG 5 cut(s) 471, 1464, 2155, 2465, 2552
BseSI GKGCMC 1 cut(s) 1713
BseXI GCAGC 8 cut(s) 126, 307, 622, 1478, 1698, 1843, 2056, 2104
BseYI CCCAGC 1 cut(s) 162
BsgI GTGCAG 4 cut(s) 125, 1406, 1485, 2406
Bsh1236I CGCG 2 cut(s) 1059, 1292
BshFI GGCC 7 cut(s) 102, 408, 478, 770, 916, 1746, 2054
BshNI GGYRCC 1 cut(s) 878
BsiHKAI GWGCWC 1 cut(s) 1713
BsiHKCI CYCGRG 2 cut(s) 1338, 2561
BsiSI CCGG 2 cut(s) 701, 815
BslFI GGGAC 2 cut(s) 977, 1508
BslI CCNNNNNNNGG 3 cut(s) 1558, 1949, 2190
BsmAI GTCTC 8 cut(s) 672, 897, 1335, 1596, 2488, 2534, 2549, 2579
BsmBI CGTCTC 2 cut(s) 672, 2579
BsmFI GGGAC 2 cut(s) 977, 1508
BsnI GGCC 7 cut(s) 102, 408, 478, 770, 916, 1746, 2054
Bso31I GGTCTC 1 cut(s) 2549
BsoBI CYCGRG 2 cut(s) 1338, 2561
Bsp1286I GDGCHC 2 cut(s) 624, 1713
Bsp1407I TGTACA 1 cut(s) 739
Bsp1720I GCTNAGC 2 cut(s) 2214, 2219
Bsp19I CCATGG 2 cut(s) 1944, 2007
BspACI CCGC 8 cut(s) 160, 212, 367, 512, 896, 1057, 1689, 2623
BspANI GGCC 7 cut(s) 102, 408, 478, 770, 916, 1746, 2054
BspCNI CTCAG 4 cut(s) 196, 1762, 2041, 2206
BspFNI CGCG 2 cut(s) 1059, 1292
BspLI GGNNCC 5 cut(s) 210, 307, 545, 880, 917
BspMAI CTGCAG 2 cut(s) 574, 2332
BspOI GCTAGC 1 cut(s) 866
BspT107I GGYRCC 1 cut(s) 878
BspTI CTTAAG 3 cut(s) 1211, 1640, 2426
BspTNI GGTCTC 1 cut(s) 2549
BsrDI GCAATG 3 cut(s) 1702, 2037, 2597
BsrGI TGTACA 1 cut(s) 739
BsrI ACTGG 6 cut(s) 60, 691, 761, 1358, 1382, 1577
BssECI CCNNGG 5 cut(s) 409, 1741, 1944, 2007, 2562
BssNI GRCGYC 2 cut(s) 246, 1884
BssSI CACGAG 2 cut(s) 180, 296
BssT1I CCWWGG 3 cut(s) 409, 1944, 2007
Bst2BI CACGAG 2 cut(s) 180, 296
Bst2UI CCWGG 3 cut(s) 496, 1203, 2297
Bst4CI ACNGT 6 cut(s) 337, 744, 1157, 1179, 1565, 2476
BstACI GRCGYC 2 cut(s) 246, 1884
BstAFI CTTAAG 3 cut(s) 1211, 1640, 2426
BstAPI GCANNNNNTGC 1 cut(s) 578
BstAUI TGTACA 1 cut(s) 739
BstBAI YACGTR 2 cut(s) 145, 1904
BstC8I GCNNGC 5 cut(s) 137, 721, 864, 2086, 2332
BstDEI CTNAG 8 cut(s) 204, 595, 911, 1770, 2022, 2049, 2214, 2219
BstDSI CCRYGG 2 cut(s) 1944, 2007
BstEII GGTNACC 1 cut(s) 2566
BstF5I GGATG 6 cut(s) 1014, 1018, 1573, 1629, 2014, 2243
BstFNI CGCG 2 cut(s) 1059, 1292
BstH2I RGCGCY 3 cut(s) 321, 977, 1406
BstHHI GCGC 6 cut(s) 320, 468, 976, 1292, 1405, 1847
BstMAI GTCTC 8 cut(s) 672, 897, 1335, 1596, 2488, 2534, 2549, 2579
BstMWI GCNNNNNNNGC 7 cut(s) 405, 578, 644, 863, 1692, 1717, 2123
BstNI CCWGG 3 cut(s) 496, 1203, 2297
BstNSI RCATGY 1 cut(s) 996
BstPAI GACNNNNGTC 1 cut(s) 2106
BstPI GGTNACC 1 cut(s) 2566
BstSCI CCNGG 5 cut(s) 494, 700, 814, 1201, 2295
BstSFI CTRYAG 5 cut(s) 336, 570, 1992, 2328, 2504
BstSLI GKGCMC 1 cut(s) 1713
BstUI CGCG 2 cut(s) 1059, 1292
BstV1I GCAGC 8 cut(s) 126, 307, 622, 1478, 1698, 1843, 2056, 2104
BstX2I RGATCY 5 cut(s) 166, 508, 543, 552, 1894
BstXI CCANNNNNNTGG 2 cut(s) 631, 1237
BstYI RGATCY 5 cut(s) 166, 508, 543, 552, 1894
Bsu36I CCTNAGG 1 cut(s) 911
BsuRI GGCC 7 cut(s) 102, 408, 478, 770, 916, 1746, 2054
BtgI CCRYGG 2 cut(s) 1944, 2007
BtrI CACGTC 1 cut(s) 1621
BtsCI GGATG 6 cut(s) 1014, 1018, 1573, 1629, 2014, 2243
BtsI GCAGTG 1 cut(s) 1418
BtsIMutI CAGTG 5 cut(s) 684, 768, 1389, 1418, 2481
Cac8I GCNNGC 5 cut(s) 137, 721, 864, 2086, 2332
CfoI GCGC 6 cut(s) 320, 468, 976, 1292, 1405, 1847
Cfr13I GGNCC 6 cut(s) 209, 306, 915, 1561, 1745, 1997
CseI GACGC 2 cut(s) 1709, 1892
Csp6I GTAC 8 cut(s) 440, 492, 564, 740, 758, 871, 1327, 1369
CviAII CATG 9 cut(s) 44, 79, 548, 858, 993, 1330, 1945, 2008, 2316
CviQI GTAC 8 cut(s) 440, 492, 564, 740, 758, 871, 1327, 1369
DdeI CTNAG 8 cut(s) 204, 595, 911, 1770, 2022, 2049, 2214, 2219
DraIII CACNNNGTG 2 cut(s) 737, 1287
DriI GACNNNNNGTC 2 cut(s) 1357, 2362
EaeI YGGCCR 2 cut(s) 100, 768
Eam1105I GACNNNNNGTC 2 cut(s) 1357, 2362
EciI GGCGGA 2 cut(s) 201, 501
Eco130I CCWWGG 3 cut(s) 409, 1944, 2007
Eco147I AGGCCT 2 cut(s) 478, 2054
Eco24I GRGCYC 1 cut(s) 624
Eco31I GGTCTC 1 cut(s) 2549
Eco47I GGWCC 4 cut(s) 209, 306, 1561, 1997
Eco47III AGCGCT 1 cut(s) 319
Eco57I CTGAAG 1 cut(s) 2559
Eco81I CCTNAGG 1 cut(s) 911
Eco88I CYCGRG 2 cut(s) 1338, 2561
Eco91I GGTNACC 1 cut(s) 2566
EcoO109I RGGNCCY 1 cut(s) 915
EcoO65I GGTNACC 1 cut(s) 2566
EcoRII CCWGG 3 cut(s) 494, 1201, 2295
EcoT14I CCWWGG 3 cut(s) 409, 1944, 2007
EcoT22I ATGCAT 3 cut(s) 859, 994, 1018
EcoT38I GRGCYC 1 cut(s) 624
ErhI CCWWGG 3 cut(s) 409, 1944, 2007
Esp3I CGTCTC 2 cut(s) 672, 2579
FaeI CATG 9 cut(s) 47, 82, 551, 861, 996, 1333, 1948, 2011, 2319
FaqI GGGAC 2 cut(s) 977, 1508
FatI CATG 9 cut(s) 43, 78, 547, 857, 992, 1329, 1944, 2007, 2315
FbaI TGATCA 1 cut(s) 2407
FblI GTMKAC 4 cut(s) 1350, 1414, 1581, 2523
Fnu4HI GCNGC 8 cut(s) 140, 321, 636, 1467, 1687, 1832, 2070, 2118
FokI GGATG 6 cut(s) 1021, 1025, 1560, 1616, 2001, 2230
FriOI GRGCYC 1 cut(s) 624
Fsp4HI GCNGC 8 cut(s) 140, 321, 636, 1467, 1687, 1832, 2070, 2118
FspBI CTAG 7 cut(s) 752, 863, 1023, 1410, 1589, 2277, 2486
GlaI GCGC 6 cut(s) 319, 467, 975, 1291, 1404, 1846
GluI GCNGC 8 cut(s) 140, 321, 636, 1467, 1687, 1832, 2070, 2118
GsaI CCCAGC 1 cut(s) 166
GsuI CTGGAG 1 cut(s) 957
HaeII RGCGCY 3 cut(s) 321, 977, 1406
HaeIII GGCC 7 cut(s) 102, 408, 478, 770, 916, 1746, 2054
HapII CCGG 2 cut(s) 701, 815
HgaI GACGC 2 cut(s) 1709, 1892
HhaI GCGC 6 cut(s) 320, 468, 976, 1292, 1405, 1847
Hin1I GRCGYC 2 cut(s) 246, 1884
Hin1II CATG 9 cut(s) 47, 82, 551, 861, 996, 1333, 1948, 2011, 2319
Hin6I GCGC 6 cut(s) 318, 466, 974, 1290, 1403, 1845
HinP1I GCGC 6 cut(s) 318, 466, 974, 1290, 1403, 1845
HincII GTYRAC 6 cut(s) 429, 1351, 1582, 2111, 2274, 2524
HindII GTYRAC 6 cut(s) 429, 1351, 1582, 2111, 2274, 2524
HindIII AAGCTT 2 cut(s) 392, 2516
HpaI GTTAAC 1 cut(s) 429
HpaII CCGG 2 cut(s) 701, 815
HphI GGTGA 5 cut(s) 71, 620, 1450, 1811, 2578
Hpy188I TCNGA 8 cut(s) 177, 557, 1782, 2031, 2050, 2368, 2407, 2578
Hpy188III TCNNGA 7 cut(s) 170, 188, 250, 936, 1340, 1589, 2099
Hpy99I CGWCG 5 cut(s) 248, 251, 1140, 1625, 1725
HpyAV CCTTC 9 cut(s) 398, 845, 1109, 1665, 1920, 1943, 2250, 2258, 2371
HpyCH4III ACNGT 6 cut(s) 337, 744, 1157, 1179, 1565, 2476
HpyF10VI GCNNNNNNNGC 7 cut(s) 405, 578, 644, 863, 1692, 1717, 2123
HpyF3I CTNAG 8 cut(s) 204, 595, 911, 1770, 2022, 2049, 2214, 2219
Hsp92I GRCGYC 2 cut(s) 246, 1884
Hsp92II CATG 9 cut(s) 47, 82, 551, 861, 996, 1333, 1948, 2011, 2319
HspAI GCGC 6 cut(s) 318, 466, 974, 1290, 1403, 1845
Ksp22I TGATCA 1 cut(s) 2407
KspAI GTTAAC 1 cut(s) 429
LmnI GCTCC 5 cut(s) 458, 1554, 2066, 2452, 2467
Lsp1109I GCAGC 8 cut(s) 126, 307, 622, 1478, 1698, 1843, 2056, 2104
LweI GCATC 4 cut(s) 64, 1003, 2023, 2071
MaeI CTAG 7 cut(s) 752, 863, 1023, 1410, 1589, 2277, 2486
MaeIII GTNAC 9 cut(s) 729, 818, 1333, 1456, 1799, 2099, 2380, 2476, 2566
MboII GAAGA 7 cut(s) 265, 623, 1457, 1604, 1806, 2156, 2524
MflI RGATCY 5 cut(s) 166, 508, 543, 552, 1894
MhlI GDGCHC 2 cut(s) 624, 1713
MlsI TGGCCA 2 cut(s) 102, 770
MluCI AATT 9 cut(s) 222, 941, 1983, 2127, 2139, 2370, 2388, 2441, 2462
MluNI TGGCCA 2 cut(s) 102, 770
MlyI GAGTC 8 cut(s) 959, 1149, 1423, 1598, 1967, 2372, 2396, 2536
MmeI TCCRAC 1 cut(s) 580
Mox20I TGGCCA 2 cut(s) 102, 770
Mph1103I ATGCAT 3 cut(s) 859, 994, 1018
MscI TGGCCA 2 cut(s) 102, 770
MseI TTAA 7 cut(s) 428, 528, 1212, 1641, 1716, 2427, 2444
MslI CAYNNNNRTG 3 cut(s) 42, 1274, 1485
Msp20I TGGCCA 2 cut(s) 102, 770
MspA1I CMGCKG 2 cut(s) 162, 1689
MspCI CTTAAG 3 cut(s) 1211, 1640, 2426
MspI CCGG 2 cut(s) 701, 815
MspR9I CCNGG 5 cut(s) 496, 702, 816, 1203, 2297
MvaI CCWGG 3 cut(s) 496, 1203, 2297
MvnI CGCG 2 cut(s) 1059, 1292
MwoI GCNNNNNNNGC 7 cut(s) 405, 578, 644, 863, 1692, 1717, 2123
NciI CCSGG 2 cut(s) 702, 816
NcoI CCATGG 2 cut(s) 1944, 2007
NheI GCTAGC 1 cut(s) 862
NlaIII CATG 9 cut(s) 47, 82, 551, 861, 996, 1333, 1948, 2011, 2319
NlaIV GGNNCC 5 cut(s) 210, 307, 545, 880, 917
NmeAIII GCCGAG 1 cut(s) 1722
NmuCI GTSAC 7 cut(s) 729, 1456, 1799, 2099, 2380, 2476, 2566
NsiI ATGCAT 3 cut(s) 859, 994, 1018
NspI RCATGY 1 cut(s) 996
PaeR7I CTCGAG 1 cut(s) 1338
PceI AGGCCT 2 cut(s) 478, 2054
PcsI WCGNNNNNNNCGW 4 cut(s) 255, 1171, 2104, 2344
PfeI GAWTC 5 cut(s) 280, 694, 1262, 1492, 1613
PflFI GACNNNGTC 1 cut(s) 1346
PfoI TCCNGGA 1 cut(s) 700
PkrI GCNGC 8 cut(s) 141, 322, 637, 1468, 1688, 1833, 2071, 2119
PleI GAGTC 8 cut(s) 959, 1148, 1423, 1598, 1967, 2371, 2396, 2536
PpsI GAGTC 8 cut(s) 959, 1148, 1423, 1598, 1967, 2371, 2396, 2536
Ppu21I YACGTR 2 cut(s) 145, 1904
PshAI GACNNNNGTC 1 cut(s) 2106
Psp1406I AACGTT 1 cut(s) 1298
Psp6I CCWGG 3 cut(s) 494, 1201, 2295
PspEI GGTNACC 1 cut(s) 2566
PspFI CCCAGC 1 cut(s) 162
PspGI CCWGG 3 cut(s) 494, 1201, 2295
PspN4I GGNNCC 5 cut(s) 210, 307, 545, 880, 917
PspPI GGNCC 6 cut(s) 209, 306, 915, 1561, 1745, 1997
PstI CTGCAG 2 cut(s) 574, 2332
PsuI RGATCY 5 cut(s) 166, 508, 543, 552, 1894
PsyI GACNNNGTC 1 cut(s) 1346
RsaI GTAC 8 cut(s) 441, 493, 565, 741, 759, 872, 1328, 1370
RsaNI GTAC 8 cut(s) 440, 492, 564, 740, 758, 871, 1327, 1369
RseI CAYNNNNRTG 3 cut(s) 42, 1274, 1485
SalI GTCGAC 3 cut(s) 1349, 1580, 2522
SaqAI TTAA 7 cut(s) 428, 528, 1212, 1641, 1716, 2427, 2444
SatI GCNGC 8 cut(s) 140, 321, 636, 1467, 1687, 1832, 2070, 2118
Sau96I GGNCC 6 cut(s) 209, 306, 915, 1561, 1745, 1997
ScaI AGTACT 1 cut(s) 872
SchI GAGTC 8 cut(s) 959, 1149, 1423, 1598, 1967, 2372, 2396, 2536
ScrFI CCNGG 5 cut(s) 496, 702, 816, 1203, 2297
SduI GDGCHC 2 cut(s) 624, 1713
SfaNI GCATC 4 cut(s) 64, 1003, 2023, 2071
SfcI CTRYAG 5 cut(s) 336, 570, 1992, 2328, 2504
Sfr274I CTCGAG 1 cut(s) 1338
SinI GGWCC 4 cut(s) 209, 306, 1561, 1997
SlaI CTCGAG 1 cut(s) 1338
SmiMI CAYNNNNRTG 3 cut(s) 42, 1274, 1485
SmlI CTYRAG 6 cut(s) 1211, 1338, 1640, 1925, 2426, 2582
SmoI CTYRAG 6 cut(s) 1211, 1338, 1640, 1925, 2426, 2582
SpeI ACTAGT 2 cut(s) 1409, 2276
Sse9I AATT 9 cut(s) 222, 941, 1983, 2127, 2139, 2370, 2388, 2441, 2462
SseBI AGGCCT 2 cut(s) 478, 2054
SsiI CCGC 8 cut(s) 160, 212, 367, 512, 896, 1057, 1689, 2623
SspI AATATT 1 cut(s) 956
SspMI CTAG 7 cut(s) 752, 863, 1023, 1410, 1589, 2277, 2486
StuI AGGCCT 2 cut(s) 478, 2054
StyD4I CCNGG 5 cut(s) 494, 700, 814, 1201, 2295
StyI CCWWGG 3 cut(s) 409, 1944, 2007
TaaI ACNGT 6 cut(s) 337, 744, 1157, 1179, 1565, 2476
TasI AATT 9 cut(s) 222, 941, 1983, 2127, 2139, 2370, 2388, 2441, 2462
TatI WGTACW 3 cut(s) 739, 870, 1326
TfiI GAWTC 5 cut(s) 280, 694, 1262, 1492, 1613
Tru1I TTAA 7 cut(s) 428, 528, 1212, 1641, 1716, 2427, 2444
Tru9I TTAA 7 cut(s) 428, 528, 1212, 1641, 1716, 2427, 2444
TscAI CASTG 5 cut(s) 691, 768, 1389, 1425, 2481
TseFI GTSAC 7 cut(s) 729, 1456, 1799, 2099, 2380, 2476, 2566
TseI GCWGC 8 cut(s) 139, 320, 635, 1466, 1686, 1831, 2069, 2117
Tsp45I GTSAC 7 cut(s) 729, 1456, 1799, 2099, 2380, 2476, 2566
TspDTI ATGAA 6 cut(s) 833, 1292, 1618, 2171, 2232, 2304
TspGWI ACGGA 4 cut(s) 1337, 1622, 1934, 2236
TspRI CASTG 5 cut(s) 691, 768, 1389, 1425, 2481
Tth111I GACNNNGTC 1 cut(s) 1346
Vha464I CTTAAG 3 cut(s) 1211, 1640, 2426
VneI GTGCAC 1 cut(s) 1709
VpaK11BI GGWCC 4 cut(s) 209, 306, 1561, 1997
XapI RAATTY 1 cut(s) 941
XbaI TCTAGA 1 cut(s) 1588
XceI RCATGY 1 cut(s) 996
XcmI CCANNNNNNNNNTGG 2 cut(s) 95, 1199
XhoI CTCGAG 1 cut(s) 1338
XmiI GTMKAC 4 cut(s) 1350, 1414, 1581, 2523
XspI CTAG 7 cut(s) 752, 863, 1023, 1410, 1589, 2277, 2486
ZraI GACGTC 1 cut(s) 247
ZrmI AGTACT 1 cut(s) 872
Zsp2I ATGCAT 3 cut(s) 859, 994, 1018
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.