pycom07g06720

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0000179
Physical Location & Seq
Forward (+)
6021461 .. 6023210
1750 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g06720.1

Sequence Viewer

Length: 1134 bp
ATGGTATTTTTCAAATGTTTTAAGAGCAACACCATTACCATTCTTGCGAAGGAAAATGATTCGCAAGATAGGGGAACAACTCTGAAGATTTACGCCCCACTGACTGGCCTTAAGGCGCTTGCTCTTCCTACAAAAGACAACTCCATGCATATTAAGTCGTGGTCTTCTGAAGTATCTTGGAAGGTGGCAAACTTTGTTCGATCAAATACGAAGAGGGAGGCGTGCACACCGGGGATTCTTATCTTGAACCCTTCACACCATGCTCATGACAGTCATCCGGCTTCGTTTAAGCTTCTCGGAGATCACATCCGCAGCGGAGCTATGGCTTGGAATGATGCCTTGTCGACTATCGGAGAAGCTGTTTTTGATGAGTCTTATTGGGAGTGGCTTGAAGATGTCTTGGGCCGATCTAAACATGTGCTTACTAGCATGGGCCTTTACCATGCTGTGTACGCATCTTTGTTTAGTTATGATCTCCATCATTCTGTCCTTCATGCGTTCTTCGAGCATTGGTGTTCAGCGACTAACACGCTTCATACAGCTCAAGGAGAGATGTCAATTTCACTTTGGGATCTCCACAAGATAGGGGGATTGCCAATCCAAGGTAAGTTTTATGACGAGGTCGTTCCTAGTGCGGAGGAACTTTCTCTCTGCAATAACCGAGGATTGCCTGCGAGTTGTCGCTGTTTATTTTGGGCATATCACAAGCTTTTCCAAGATGCTCGAAGTAAATCAGGCGTGAAGATTTCTTCATGGATCCGCTTCTGGTATTGGGAGGACACAAGGTACAAGAAGTCCTCGAAGAGAAGAAGTTGCAACAAAACCACTAAGCCAAAGGGAGACTCATATCCATCTGGTGCCATTGGTTCAGCTAGGCGCCGTTCCCTTGCCGAGTTTAGAGCGTTTGAGGACCTTGGCATAGCATCAGAGCATGTGGAAGAATCTTACCTAGCTGCTTTCTTAGCTTGTTGGCTTTGTAAGTTTGTTTTTCCAATCGGCGACGTCAACTTTGTTCGTCCTGGGGTTTTCAAAGTTGCTAGCAAGATGGCTGCAGGTGAATCTTTCAGTCTTGCTATCCCGGTTTTGGCCAATATTTATAATGGCTTGAGTGTTGTTTCGAACTCATTGGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

378

Amino Acids

42.26

Weight (kDa)

8.84

Isoelectric Point (pI)

51.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 145 - 375 3e-20 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1098
AarI CACCTGC 1 cut(s) 1043
AatII GACGTC 1 cut(s) 1005
Acc36I ACCTGC 1 cut(s) 1043
AccB1I GGYRCC 2 cut(s) 857, 876
AccB7I CCANNNNNTGG 1 cut(s) 104
AccI GTMKAC 1 cut(s) 344
AciI CCGC 4 cut(s) 310, 315, 635, 760
AclWI GGATC 3 cut(s) 579, 751, 764
AcoI YGGCCR 1 cut(s) 1086
AcuI CTGAAG 2 cut(s) 104, 189
AcyI GRCGYC 2 cut(s) 877, 1002
AfaI GTAC 2 cut(s) 452, 788
AfiI CCNNNNNNNGG 3 cut(s) 104, 602, 1084
AflII CTTAAG 1 cut(s) 110
AflIII ACRYGT 1 cut(s) 415
AgsI TTSAA 4 cut(s) 13, 247, 392, 1030
AjnI CCWGG 1 cut(s) 1018
AluBI AGCT 8 cut(s) 292, 320, 359, 542, 709, 872, 953, 965
AluI AGCT 8 cut(s) 292, 320, 359, 542, 709, 872, 953, 965
Alw21I GWGCWC 1 cut(s) 227
Alw26I GTCTC 1 cut(s) 834
Alw44I GTGCAC 1 cut(s) 223
AlwI GGATC 3 cut(s) 579, 751, 764
AoxI GGCC 4 cut(s) 106, 403, 433, 1086
ApaLI GTGCAC 1 cut(s) 223
ApeKI GCWGC 3 cut(s) 312, 953, 1049
ArsI GACNNNNNNTTYG 2 cut(s) 992, 1024
AspLEI GCGC 2 cut(s) 118, 879
AspS9I GGNCC 3 cut(s) 403, 433, 910
AsuC2I CCSGG 2 cut(s) 231, 1079
AsuHPI GGTGA 1 cut(s) 1067
AsuII TTCGAA 1 cut(s) 1118
AsuNHI GCTAGC 1 cut(s) 1037
AvaII GGWCC 1 cut(s) 910
BaeGI GKGCMC 1 cut(s) 227
BalI TGGCCA 1 cut(s) 1088
BamHI GGATCC 1 cut(s) 756
BanI GGYRCC 2 cut(s) 857, 876
BbsI GAAGAC 1 cut(s) 156
Bbv12I GWGCWC 1 cut(s) 227
BbvI GCAGC 3 cut(s) 324, 940, 1036
BccI CCATC 3 cut(s) 486, 859, 1039
BceAI ACGGC 1 cut(s) 864
BciT130I CCWGG 1 cut(s) 1020
BcnI CCSGG 2 cut(s) 231, 1079
BcoDI GTCTC 1 cut(s) 834
BfaI CTAG 5 cut(s) 426, 630, 873, 950, 1038
BfmI CTRYAG 1 cut(s) 1050
BfoI RGCGCY 2 cut(s) 119, 880
BfrI CTTAAG 1 cut(s) 110
BfuAI ACCTGC 1 cut(s) 1043
BisI GCNGC 3 cut(s) 313, 954, 1050
BlsI GCNGC 3 cut(s) 314, 955, 1051
Bme1390I CCNGG 3 cut(s) 231, 1020, 1079
Bme18I GGWCC 1 cut(s) 910
BmgT120I GGNCC 3 cut(s) 403, 433, 910
BmiI GGNNCC 3 cut(s) 758, 859, 878
BmrFI CCNGG 3 cut(s) 231, 1020, 1079
BmsI GCATC 4 cut(s) 325, 464, 709, 932
BmtI GCTAGC 1 cut(s) 1041
BpiI GAAGAC 1 cut(s) 156
Bpu14I TTCGAA 1 cut(s) 1118
BpuEI CTTGAG 2 cut(s) 528, 1126
BpuMI CCSGG 2 cut(s) 231, 1079
BsaBI GATNNNNATC 2 cut(s) 239, 477
BsaHI GRCGYC 2 cut(s) 877, 1002
BsaJI CCNNGG 5 cut(s) 230, 601, 661, 913, 1019
BsaXI ACNNNNNCTCC 2 cut(s) 345, 375
Bsc4I CCNNNNNNNGG 3 cut(s) 104, 602, 1084
Bse1I ACTGG 1 cut(s) 109
Bse8I GATNNNNATC 2 cut(s) 239, 477
BseBI CCWGG 1 cut(s) 1020
BseDI CCNNGG 5 cut(s) 230, 601, 661, 913, 1019
BseGI GGATG 2 cut(s) 274, 306
BseJI GATNNNNATC 2 cut(s) 239, 477
BseLI CCNNNNNNNGG 3 cut(s) 104, 602, 1084
BseNI ACTGG 1 cut(s) 109
BseSI GKGCMC 1 cut(s) 227
BseXI GCAGC 3 cut(s) 324, 940, 1036
BshFI GGCC 4 cut(s) 108, 405, 435, 1088
BshNI GGYRCC 2 cut(s) 857, 876
BsiHKAI GWGCWC 1 cut(s) 227
BsiSI CCGG 3 cut(s) 230, 278, 1079
BslI CCNNNNNNNGG 3 cut(s) 104, 602, 1084
BsmAI GTCTC 1 cut(s) 834
BsnI GGCC 4 cut(s) 108, 405, 435, 1088
Bsp119I TTCGAA 1 cut(s) 1118
Bsp1286I GDGCHC 1 cut(s) 227
Bsp143I GATC 6 cut(s) 200, 301, 407, 472, 571, 756
BspACI CCGC 4 cut(s) 310, 315, 635, 760
BspANI GGCC 4 cut(s) 108, 405, 435, 1088
BspHI TCATGA 1 cut(s) 265
BspLI GGNNCC 3 cut(s) 758, 859, 878
BspMAI CTGCAG 1 cut(s) 1054
BspMI ACCTGC 1 cut(s) 1043
BspOI GCTAGC 1 cut(s) 1041
BspPI GGATC 3 cut(s) 579, 751, 764
BspQI GCTCTTC 1 cut(s) 129
BspT104I TTCGAA 1 cut(s) 1118
BspT107I GGYRCC 2 cut(s) 857, 876
BspTI CTTAAG 1 cut(s) 110
BsrI ACTGG 1 cut(s) 109
BssECI CCNNGG 5 cut(s) 230, 601, 661, 913, 1019
BssMI GATC 6 cut(s) 200, 301, 407, 472, 571, 756
BssNI GRCGYC 2 cut(s) 877, 1002
BssT1I CCWWGG 2 cut(s) 601, 913
Bst2UI CCWGG 1 cut(s) 1020
Bst4CI ACNGT 1 cut(s) 272
Bst6I CTCTTC 3 cut(s) 129, 206, 797
BstACI GRCGYC 2 cut(s) 877, 1002
BstAFI CTTAAG 1 cut(s) 110
BstBI TTCGAA 1 cut(s) 1118
BstC8I GCNNGC 4 cut(s) 120, 223, 672, 1039
BstDEI CTNAG 2 cut(s) 828, 961
BstF5I GGATG 2 cut(s) 274, 306
BstH2I RGCGCY 2 cut(s) 119, 880
BstHHI GCGC 2 cut(s) 118, 879
BstKTI GATC 6 cut(s) 203, 304, 410, 475, 574, 759
BstMAI GTCTC 1 cut(s) 834
BstMBI GATC 6 cut(s) 200, 301, 407, 472, 571, 756
BstMWI GCNNNNNNNGC 2 cut(s) 452, 962
BstNI CCWGG 1 cut(s) 1020
BstNSI RCATGY 2 cut(s) 419, 935
BstSCI CCNGG 3 cut(s) 229, 1018, 1077
BstSFI CTRYAG 1 cut(s) 1050
BstSLI GKGCMC 1 cut(s) 227
BstV1I GCAGC 3 cut(s) 324, 940, 1036
BstV2I GAAGAC 1 cut(s) 156
BstX2I RGATCY 2 cut(s) 571, 756
BstYI RGATCY 2 cut(s) 571, 756
BsuRI GGCC 4 cut(s) 108, 405, 435, 1088
BtsCI GGATG 2 cut(s) 274, 306
BtsIMutI CAGTG 1 cut(s) 98
BveI ACCTGC 1 cut(s) 1043
Cac8I GCNNGC 4 cut(s) 120, 223, 672, 1039
CciI TCATGA 1 cut(s) 265
CfoI GCGC 2 cut(s) 118, 879
Cfr13I GGNCC 3 cut(s) 403, 433, 910
Csp6I GTAC 2 cut(s) 451, 787
CviAII CATG 9 cut(s) 145, 260, 266, 416, 430, 443, 494, 753, 932
CviQI GTAC 2 cut(s) 451, 787
DdeI CTNAG 2 cut(s) 828, 961
DinI GGCGCC 1 cut(s) 878
DpnI GATC 6 cut(s) 202, 303, 409, 474, 573, 758
DpnII GATC 6 cut(s) 200, 301, 407, 472, 571, 756
EaeI YGGCCR 1 cut(s) 1086
Eam1104I CTCTTC 3 cut(s) 129, 206, 797
EarI CTCTTC 3 cut(s) 129, 206, 797
Eco130I CCWWGG 2 cut(s) 601, 913
Eco47I GGWCC 1 cut(s) 910
Eco57I CTGAAG 2 cut(s) 104, 189
EcoO109I RGGNCCY 1 cut(s) 910
EcoRII CCWGG 1 cut(s) 1018
EcoT14I CCWWGG 2 cut(s) 601, 913
EcoT22I ATGCAT 1 cut(s) 150
EgeI GGCGCC 1 cut(s) 878
EheI GGCGCC 1 cut(s) 878
ErhI CCWWGG 2 cut(s) 601, 913
FaeI CATG 9 cut(s) 148, 263, 269, 419, 433, 446, 497, 756, 935
FatI CATG 9 cut(s) 144, 259, 265, 415, 429, 442, 493, 752, 931
FblI GTMKAC 1 cut(s) 344
Fnu4HI GCNGC 3 cut(s) 313, 954, 1050
FokI GGATG 2 cut(s) 261, 293
Fsp4HI GCNGC 3 cut(s) 313, 954, 1050
FspBI CTAG 5 cut(s) 426, 630, 873, 950, 1038
GlaI GCGC 2 cut(s) 117, 878
GluI GCNGC 3 cut(s) 313, 954, 1050
HaeII RGCGCY 2 cut(s) 119, 880
HaeIII GGCC 4 cut(s) 108, 405, 435, 1088
HapII CCGG 3 cut(s) 230, 278, 1079
HhaI GCGC 2 cut(s) 118, 879
Hin1I GRCGYC 2 cut(s) 877, 1002
Hin1II CATG 9 cut(s) 148, 263, 269, 419, 433, 446, 497, 756, 935
Hin6I GCGC 2 cut(s) 116, 877
HinP1I GCGC 2 cut(s) 116, 877
HincII GTYRAC 2 cut(s) 345, 1006
HindII GTYRAC 2 cut(s) 345, 1006
HindIII AAGCTT 2 cut(s) 290, 707
HinfI GANTC 6 cut(s) 59, 235, 371, 842, 941, 1058
HpaII CCGG 3 cut(s) 230, 278, 1079
HphI GGTGA 1 cut(s) 1067
Hpy166II GTNNAC 4 cut(s) 225, 345, 451, 1006
Hpy188I TCNGA 5 cut(s) 84, 169, 299, 353, 928
Hpy188III TCNNGA 2 cut(s) 244, 266
Hpy8I GTNNAC 4 cut(s) 225, 345, 451, 1006
Hpy99I CGWCG 1 cut(s) 1004
HpyAV CCTTC 4 cut(s) 43, 175, 261, 500
HpyCH4III ACNGT 1 cut(s) 272
HpyCH4IV ACGT 1 cut(s) 1002
HpyCH4V TGCA 5 cut(s) 148, 225, 654, 816, 1052
HpyF10VI GCNNNNNNNGC 2 cut(s) 452, 962
HpyF3I CTNAG 2 cut(s) 828, 961
HpySE526I ACGT 1 cut(s) 1002
Hsp92I GRCGYC 2 cut(s) 877, 1002
Hsp92II CATG 9 cut(s) 148, 263, 269, 419, 433, 446, 497, 756, 935
HspAI GCGC 2 cut(s) 116, 877
KasI GGCGCC 1 cut(s) 876
Kzo9I GATC 6 cut(s) 200, 301, 407, 472, 571, 756
LguI GCTCTTC 1 cut(s) 129
LmnI GCTCC 1 cut(s) 317
Lsp1109I GCAGC 3 cut(s) 324, 940, 1036
LweI GCATC 4 cut(s) 325, 464, 709, 932
MaeI CTAG 5 cut(s) 426, 630, 873, 950, 1038
MaeII ACGT 1 cut(s) 1002
MalI GATC 6 cut(s) 202, 303, 409, 474, 573, 758
MboI GATC 6 cut(s) 200, 301, 407, 472, 571, 756
MflI RGATCY 2 cut(s) 571, 756
MhlI GDGCHC 1 cut(s) 227
MlsI TGGCCA 1 cut(s) 1088
MluCI AATT 1 cut(s) 558
MluNI TGGCCA 1 cut(s) 1088
Mly113I GGCGCC 1 cut(s) 877
MlyI GAGTC 2 cut(s) 380, 836
MnlI CCTC 8 cut(s) 207, 211, 613, 631, 656, 769, 808, 901
Mox20I TGGCCA 1 cut(s) 1088
Mph1103I ATGCAT 1 cut(s) 150
MscI TGGCCA 1 cut(s) 1088
MseI TTAA 4 cut(s) 21, 111, 153, 288
MslI CAYNNNNRTG 2 cut(s) 264, 1129
Msp20I TGGCCA 1 cut(s) 1088
MspA1I CMGCKG 1 cut(s) 315
MspCI CTTAAG 1 cut(s) 110
MspI CCGG 3 cut(s) 230, 278, 1079
MspR9I CCNGG 3 cut(s) 231, 1020, 1079
MvaI CCWGG 1 cut(s) 1020
MwoI GCNNNNNNNGC 2 cut(s) 452, 962
NarI GGCGCC 1 cut(s) 877
NciI CCSGG 2 cut(s) 231, 1079
NdeII GATC 6 cut(s) 200, 301, 407, 472, 571, 756
NheI GCTAGC 1 cut(s) 1037
NlaIII CATG 9 cut(s) 148, 263, 269, 419, 433, 446, 497, 756, 935
NlaIV GGNNCC 3 cut(s) 758, 859, 878
NmeAIII GCCGAG 1 cut(s) 916
NsiI ATGCAT 1 cut(s) 150
NspI RCATGY 2 cut(s) 419, 935
NspV TTCGAA 1 cut(s) 1118
PagI TCATGA 1 cut(s) 265
PaqCI CACCTGC 1 cut(s) 1043
PciI ACATGT 1 cut(s) 415
PciSI GCTCTTC 1 cut(s) 129
PfeI GAWTC 4 cut(s) 59, 235, 941, 1058
PflFI GACNNNGTC 1 cut(s) 620
PflMI CCANNNNNTGG 1 cut(s) 104
PkrI GCNGC 3 cut(s) 314, 955, 1051
PleI GAGTC 2 cut(s) 379, 836
PluTI GGCGCC 1 cut(s) 880
PpsI GAGTC 2 cut(s) 379, 836
PpuMI RGGWCCY 1 cut(s) 910
PscI ACATGT 1 cut(s) 415
PsiI TTATAA 1 cut(s) 1098
Psp5II RGGWCCY 1 cut(s) 910
Psp6I CCWGG 1 cut(s) 1018
PspGI CCWGG 1 cut(s) 1018
PspN4I GGNNCC 3 cut(s) 758, 859, 878
PspPI GGNCC 3 cut(s) 403, 433, 910
PspPPI RGGWCCY 1 cut(s) 910
PstI CTGCAG 1 cut(s) 1054
PsuI RGATCY 2 cut(s) 571, 756
PsyI GACNNNGTC 1 cut(s) 620
RsaI GTAC 2 cut(s) 452, 788
RsaNI GTAC 2 cut(s) 451, 787
RseI CAYNNNNRTG 2 cut(s) 264, 1129
SalI GTCGAC 1 cut(s) 343
SapI GCTCTTC 1 cut(s) 129
SaqAI TTAA 4 cut(s) 21, 111, 153, 288
SatI GCNGC 3 cut(s) 313, 954, 1050
Sau3AI GATC 6 cut(s) 200, 301, 407, 472, 571, 756
Sau96I GGNCC 3 cut(s) 403, 433, 910
SchI GAGTC 2 cut(s) 380, 836
ScrFI CCNGG 3 cut(s) 231, 1020, 1079
SduI GDGCHC 1 cut(s) 227
SfaNI GCATC 4 cut(s) 325, 464, 709, 932
SfcI CTRYAG 1 cut(s) 1050
SfoI GGCGCC 1 cut(s) 878
SfuI TTCGAA 1 cut(s) 1118
SinI GGWCC 1 cut(s) 910
SmiMI CAYNNNNRTG 2 cut(s) 264, 1129
SmlI CTYRAG 3 cut(s) 110, 543, 1105
SmoI CTYRAG 3 cut(s) 110, 543, 1105
Sse9I AATT 1 cut(s) 558
SsiI CCGC 4 cut(s) 310, 315, 635, 760
SspDI GGCGCC 1 cut(s) 876
SspI AATATT 1 cut(s) 1093
SspMI CTAG 5 cut(s) 426, 630, 873, 950, 1038
StyD4I CCNGG 3 cut(s) 229, 1018, 1077
StyI CCWWGG 2 cut(s) 601, 913
TaaI ACNGT 1 cut(s) 272
TaiI ACGT 1 cut(s) 1005
TaqI TCGA 6 cut(s) 199, 344, 504, 724, 800, 1118
TasI AATT 1 cut(s) 558
TfiI GAWTC 4 cut(s) 59, 235, 941, 1058
Tru1I TTAA 4 cut(s) 21, 111, 153, 288
Tru9I TTAA 4 cut(s) 21, 111, 153, 288
TscAI CASTG 1 cut(s) 105
TseI GCWGC 3 cut(s) 312, 953, 1049
TspDTI ATGAA 3 cut(s) 482, 524, 741
TspRI CASTG 1 cut(s) 105
Tth111I GACNNNGTC 1 cut(s) 620
Van91I CCANNNNNTGG 1 cut(s) 104
Vha464I CTTAAG 1 cut(s) 110
VneI GTGCAC 1 cut(s) 223
VpaK11BI GGWCC 1 cut(s) 910
XceI RCATGY 2 cut(s) 419, 935
XmiI GTMKAC 1 cut(s) 344
XspI CTAG 5 cut(s) 426, 630, 873, 950, 1038
ZraI GACGTC 1 cut(s) 1003
Zsp2I ATGCAT 1 cut(s) 150
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.