Rmu_sc0001227.1_g000043

Galactose oxidase, central domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001227.1
OG0000179
Physical Location & Seq
Reverse (-)
195398 .. 198660
3263 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001227.1_g000043.1.cds

Sequence Viewer

Length: 1311 bp
atgaacgtcctaagcgcttggattcctccacctttactggtgtggttaggctttgcgtacatcgtcaggcacttgcaatcgcgcttcccatccttttgtggccccatggctttcttcaagtgcttcaagaaagggatagtcaccatcctcgaggatccggaggacactcaaagtgatggcactactctaggagctttgcgctataagaggcctccgaacaaaagcaacaagaacaaaagagatctgcccccgaatgcgtttaatccatatggcaagatccatgagatccaacaacgaacttttgcaaaccttgcaatatttgatgacttaggcatggaggtgaaagcaacgaaagtagcgcctactagtggaccactgcacaagactctgaaagcaaaagaagataaaaaggtcaccggtgcaacaccgccttatcacaaaaatgtgatgccttgtgaagttgaatgtagcaccaacgtccctatgcctcctaataggactgtgcttcctagtagtgattgtaagactcatccgctcaacactctagaagatgatggggactctttagacactcacattgctttggctcatccacttaagctgaaaagacctgccttcaaagaaagaaggcatagtagaagcagcgataacaataatagtgaagtacactttaagcgtcggaaaactgacaccagtcttggccctacttattgtgatcctgatgctgagttcactctgaatactgactttcttgagattgatggtcatccactttgggggaacaatgacgcctcttcagaccctatacgtgttccttctgcagcggaacttgaggcttactcttttcccacgaaaggaacatccaattcaaagaatgactcacagcaaattgaccctataggtccacttaccaaggtgcatcctcctaagcctctgaacaccatagccttttctgaggcctctcttggtggagctgatattatagatgctagccaaagacttcgtgatatccgtcaacaagctgctaccgcggtttgtgaacaaattgaagatatgataatgaagcactcctcaaaggccattctttccagcaaggggggacttgacaagctgatagctgagcttagccattatgggattgatccttcatccgtaaggggaaaagctgagggattgttgactagtgctaaccaatacaacctagcacggctttcttgttcatgcaaggctactccaggaaaacgtaatcaacatctggctgacatagagtcagcaattgcaaaggtcacttcaattagtcaagctgactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko04212 ko05168 map04212 map05168
Pfam Domains
Protein Families
Kelch_3 Kelch_4 Kelch_5

Protein Analysis

436

Amino Acids

47.87

Weight (kDa)

8.44

Isoelectric Point (pI)

45.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 149
Acc36I ACCTGC 1 cut(s) 619
AccBSI CCGCTC 1 cut(s) 535
AccII CGCG 2 cut(s) 82, 1031
AccIII TCCGGA 1 cut(s) 157
AciI CCGC 5 cut(s) 428, 533, 824, 1029, 1031
AclWI GGATC 6 cut(s) 149, 162, 271, 280, 710, 1136
AcuI CTGAAG 1 cut(s) 780
AcyI GRCGYC 1 cut(s) 789
AfaI GTAC 2 cut(s) 59, 666
AfeI AGCGCT 1 cut(s) 16
AfiI CCNNNNNNNGG 4 cut(s) 368, 776, 854, 1095
AflII CTTAAG 1 cut(s) 596
AflIII ACRYGT 1 cut(s) 808
AgeI ACCGGT 1 cut(s) 416
AgsI TTSAA 7 cut(s) 118, 127, 464, 619, 870, 1049, 1293
AhdI GACNNNNNGTC 1 cut(s) 1267
AhlI ACTAGT 2 cut(s) 365, 1181
AjnI CCWGG 1 cut(s) 1234
AluBI AGCT 9 cut(s) 194, 601, 974, 1022, 1111, 1118, 1123, 1166, 1304
AluI AGCT 9 cut(s) 194, 601, 974, 1022, 1111, 1118, 1123, 1166, 1304
AlwI GGATC 6 cut(s) 149, 162, 271, 280, 710, 1136
Ama87I CYCGRG 1 cut(s) 149
Aor13HI TCCGGA 1 cut(s) 157
Aor51HI AGCGCT 1 cut(s) 16
AoxI GGCC 5 cut(s) 100, 209, 700, 957, 1077
ApeKI GCWGC 3 cut(s) 642, 821, 1022
AsiGI ACCGGT 1 cut(s) 416
AspLEI GCGC 4 cut(s) 17, 84, 201, 361
AspS9I GGNCC 4 cut(s) 101, 371, 701, 902
AsuHPI GGTGA 3 cut(s) 133, 352, 406
AsuNHI GCTAGC 1 cut(s) 989
AvaI CYCGRG 1 cut(s) 149
AvaII GGWCC 2 cut(s) 371, 902
BamHI GGATCC 1 cut(s) 154
BbvCI CCTCAGC 1 cut(s) 1167
BbvI GCAGC 3 cut(s) 654, 833, 1009
BccI CCATC 5 cut(s) 97, 152, 170, 548, 755
BceAI ACGGC 1 cut(s) 1223
BciT130I CCWGG 1 cut(s) 1236
BcuI ACTAGT 2 cut(s) 365, 1181
BfaI CTAG 7 cut(s) 188, 366, 510, 545, 990, 1182, 1202
BfmI CTRYAG 2 cut(s) 819, 897
BfoI RGCGCY 2 cut(s) 18, 362
BfrI CTTAAG 1 cut(s) 596
BfuAI ACCTGC 1 cut(s) 619
BglII AGATCT 1 cut(s) 241
BisI GCNGC 3 cut(s) 643, 822, 1023
BlpI GCTNAGC 2 cut(s) 1119, 1124
BlsI GCNGC 3 cut(s) 644, 823, 1024
Bme1390I CCNGG 1 cut(s) 1236
Bme18I GGWCC 2 cut(s) 371, 902
BmeRI GACNNNNNGTC 1 cut(s) 1267
BmeT110I CYCGRG 1 cut(s) 149
BmgT120I GGNCC 4 cut(s) 101, 371, 701, 902
BmiI GGNNCC 2 cut(s) 103, 156
BmrFI CCNGG 1 cut(s) 1236
BmsI GCATC 4 cut(s) 438, 712, 928, 976
BmtI GCTAGC 1 cut(s) 993
BoxI GACNNNNGTC 1 cut(s) 693
BplI GAGNNNNNCTC 2 cut(s) 824, 856
BpmI CTGGAG 1 cut(s) 1218
Bpu10I CCTNAGC 3 cut(s) 11, 927, 1167
Bpu1102I GCTNAGC 2 cut(s) 1119, 1124
BpuEI CTTGAG 2 cut(s) 773, 851
BsaAI YACGTR 1 cut(s) 809
BsaBI GATNNNNATC 1 cut(s) 765
BsaHI GRCGYC 1 cut(s) 789
BsaJI CCNNGG 3 cut(s) 105, 912, 1029
BsaWI WCCGGW 2 cut(s) 157, 416
Bsc4I CCNNNNNNNGG 4 cut(s) 368, 776, 854, 1095
Bse118I RCCGGY 1 cut(s) 416
Bse1I ACTGG 2 cut(s) 42, 693
Bse3DI GCAATG 1 cut(s) 576
Bse8I GATNNNNATC 1 cut(s) 765
BseAI TCCGGA 1 cut(s) 157
BseBI CCWGG 1 cut(s) 1236
BseDI CCNNGG 3 cut(s) 105, 912, 1029
BseGI GGATG 8 cut(s) 89, 144, 529, 589, 766, 860, 919, 1148
BseJI GATNNNNATC 1 cut(s) 765
BseLI CCNNNNNNNGG 4 cut(s) 368, 776, 854, 1095
BseMI GCAATG 1 cut(s) 576
BseMII CTCAG 4 cut(s) 717, 945, 1110, 1158
BseNI ACTGG 2 cut(s) 42, 693
BseRI GAGGAG 1 cut(s) 1060
BseXI GCAGC 3 cut(s) 654, 833, 1009
BsgI GTGCAG 1 cut(s) 362
Bsh1236I CGCG 2 cut(s) 82, 1031
BshFI GGCC 5 cut(s) 102, 211, 702, 959, 1079
BshTI ACCGGT 1 cut(s) 416
BsiHKCI CYCGRG 1 cut(s) 149
BsiSI CCGG 2 cut(s) 158, 417
BslFI GGGAC 3 cut(s) 464, 572, 1113
BslI CCNNNNNNNGG 4 cut(s) 368, 776, 854, 1095
BsmFI GGGAC 3 cut(s) 464, 572, 1113
BsmI GAATGC 1 cut(s) 259
BsnI GGCC 5 cut(s) 102, 211, 702, 959, 1079
BsoBI CYCGRG 1 cut(s) 149
Bsp13I TCCGGA 1 cut(s) 157
Bsp143I GATC 6 cut(s) 154, 241, 276, 285, 715, 1141
Bsp1720I GCTNAGC 2 cut(s) 1119, 1124
Bsp19I CCATGG 1 cut(s) 105
BspACI CCGC 5 cut(s) 428, 533, 824, 1029, 1031
BspANI GGCC 5 cut(s) 102, 211, 702, 959, 1079
BspCNI CTCAG 4 cut(s) 718, 946, 1111, 1159
BspEI TCCGGA 1 cut(s) 157
BspFNI CGCG 2 cut(s) 82, 1031
BspLI GGNNCC 2 cut(s) 103, 156
BspMAI CTGCAG 1 cut(s) 823
BspMI ACCTGC 1 cut(s) 619
BspOI GCTAGC 1 cut(s) 993
BspPI GGATC 6 cut(s) 149, 162, 271, 280, 710, 1136
BspTI CTTAAG 1 cut(s) 596
BsrBI CCGCTC 1 cut(s) 535
BsrDI GCAATG 1 cut(s) 576
BsrFI RCCGGY 1 cut(s) 416
BsrI ACTGG 2 cut(s) 42, 693
BssAI RCCGGY 1 cut(s) 416
BssECI CCNNGG 3 cut(s) 105, 912, 1029
BssMI GATC 6 cut(s) 154, 241, 276, 285, 715, 1141
BssNI GRCGYC 1 cut(s) 789
BssT1I CCWWGG 2 cut(s) 105, 912
Bst2UI CCWGG 1 cut(s) 1236
Bst4CI ACNGT 1 cut(s) 502
Bst6I CTCTTC 1 cut(s) 799
BstACI GRCGYC 1 cut(s) 789
BstAFI CTTAAG 1 cut(s) 596
BstAPI GCANNNNNTGC 1 cut(s) 311
BstBAI YACGTR 1 cut(s) 809
BstC8I GCNNGC 1 cut(s) 991
BstDEI CTNAG 8 cut(s) 11, 328, 726, 927, 954, 1119, 1124, 1167
BstDSI CCRYGG 2 cut(s) 105, 1029
BstEII GGTNACC 1 cut(s) 412
BstF5I GGATG 8 cut(s) 89, 144, 529, 589, 766, 860, 919, 1148
BstFNI CGCG 2 cut(s) 82, 1031
BstH2I RGCGCY 2 cut(s) 18, 362
BstHHI GCGC 4 cut(s) 17, 84, 201, 361
BstKTI GATC 6 cut(s) 157, 244, 279, 288, 718, 1144
BstMBI GATC 6 cut(s) 154, 241, 276, 285, 715, 1141
BstMWI GCNNNNNNNGC 2 cut(s) 311, 1028
BstNI CCWGG 1 cut(s) 1236
BstPAI GACNNNNGTC 1 cut(s) 693
BstPI GGTNACC 1 cut(s) 412
BstSCI CCNGG 1 cut(s) 1234
BstSFI CTRYAG 2 cut(s) 819, 897
BstUI CGCG 2 cut(s) 82, 1031
BstV1I GCAGC 3 cut(s) 654, 833, 1009
BstX2I RGATCY 4 cut(s) 154, 241, 276, 285
BstYI RGATCY 4 cut(s) 154, 241, 276, 285
BsuRI GGCC 5 cut(s) 102, 211, 702, 959, 1079
BtgI CCRYGG 2 cut(s) 105, 1029
BtsCI GGATG 8 cut(s) 89, 144, 529, 589, 766, 860, 919, 1148
BtsI GCAGTG 1 cut(s) 374
BtsIMutI CAGTG 1 cut(s) 374
BveI ACCTGC 1 cut(s) 619
Cac8I GCNNGC 1 cut(s) 991
CfoI GCGC 4 cut(s) 17, 84, 201, 361
Cfr10I RCCGGY 1 cut(s) 416
Cfr13I GGNCC 4 cut(s) 101, 371, 701, 902
Cfr42I CCGCGG 1 cut(s) 1032
CseI GACGC 2 cut(s) 665, 797
Csp6I GTAC 2 cut(s) 58, 665
CspAI ACCGGT 1 cut(s) 416
CviAII CATG 4 cut(s) 106, 281, 334, 1221
CviQI GTAC 2 cut(s) 58, 665
DdeI CTNAG 8 cut(s) 11, 328, 726, 927, 954, 1119, 1124, 1167
DpnI GATC 6 cut(s) 156, 243, 278, 287, 717, 1143
DpnII GATC 6 cut(s) 154, 241, 276, 285, 715, 1141
DriI GACNNNNNGTC 1 cut(s) 1267
Eam1104I CTCTTC 1 cut(s) 799
Eam1105I GACNNNNNGTC 1 cut(s) 1267
EarI CTCTTC 1 cut(s) 799
Eco130I CCWWGG 2 cut(s) 105, 912
Eco147I AGGCCT 2 cut(s) 211, 959
Eco32I GATATC 1 cut(s) 1009
Eco47I GGWCC 2 cut(s) 371, 902
Eco47III AGCGCT 1 cut(s) 16
Eco57I CTGAAG 1 cut(s) 780
Eco88I CYCGRG 1 cut(s) 149
Eco91I GGTNACC 1 cut(s) 412
EcoO65I GGTNACC 1 cut(s) 412
EcoRII CCWGG 1 cut(s) 1234
EcoRV GATATC 1 cut(s) 1009
EcoT14I CCWWGG 2 cut(s) 105, 912
ErhI CCWWGG 2 cut(s) 105, 912
FaeI CATG 4 cut(s) 109, 284, 337, 1224
FaqI GGGAC 3 cut(s) 464, 572, 1113
FatI CATG 4 cut(s) 105, 280, 333, 1220
FauNDI CATATG 1 cut(s) 268
Fnu4HI GCNGC 3 cut(s) 643, 822, 1023
FokI GGATG 8 cut(s) 76, 131, 516, 576, 753, 847, 906, 1135
Fsp4HI GCNGC 3 cut(s) 643, 822, 1023
FspBI CTAG 7 cut(s) 188, 366, 510, 545, 990, 1182, 1202
GlaI GCGC 4 cut(s) 16, 83, 200, 360
GluI GCNGC 3 cut(s) 643, 822, 1023
GsuI CTGGAG 1 cut(s) 1218
HaeII RGCGCY 2 cut(s) 18, 362
HaeIII GGCC 5 cut(s) 102, 211, 702, 959, 1079
HapII CCGG 2 cut(s) 158, 417
HgaI GACGC 2 cut(s) 665, 797
HhaI GCGC 4 cut(s) 17, 84, 201, 361
Hin1I GRCGYC 1 cut(s) 789
Hin1II CATG 4 cut(s) 109, 284, 337, 1224
Hin6I GCGC 4 cut(s) 15, 82, 199, 359
HinP1I GCGC 4 cut(s) 15, 82, 199, 359
HincII GTYRAC 2 cut(s) 1016, 1179
HindII GTYRAC 2 cut(s) 1016, 1179
HinfI GANTC 6 cut(s) 22, 385, 526, 560, 878, 1268
HpaII CCGG 2 cut(s) 158, 417
HphI GGTGA 3 cut(s) 133, 352, 406
Hpy166II GTNNAC 7 cut(s) 371, 667, 732, 905, 1016, 1040, 1179
Hpy188I TCNGA 7 cut(s) 216, 390, 681, 738, 799, 936, 955
Hpy188III TCNNGA 6 cut(s) 127, 158, 545, 719, 752, 1004
Hpy8I GTNNAC 7 cut(s) 371, 667, 732, 905, 1016, 1040, 1179
Hpy99I CGWCG 1 cut(s) 681
HpyAV CCTTC 4 cut(s) 621, 625, 825, 1155
HpyCH4III ACNGT 1 cut(s) 502
HpyCH4IV ACGT 4 cut(s) 6, 477, 808, 1243
HpyCH4V TGCA 9 cut(s) 76, 305, 314, 379, 422, 821, 919, 1224, 1280
HpyF10VI GCNNNNNNNGC 2 cut(s) 311, 1028
HpyF3I CTNAG 8 cut(s) 11, 328, 726, 927, 954, 1119, 1124, 1167
HpySE526I ACGT 4 cut(s) 6, 477, 808, 1243
Hsp92I GRCGYC 1 cut(s) 789
Hsp92II CATG 4 cut(s) 109, 284, 337, 1224
HspAI GCGC 4 cut(s) 15, 82, 199, 359
Kpn2I TCCGGA 1 cut(s) 157
KspI CCGCGG 1 cut(s) 1032
Kzo9I GATC 6 cut(s) 154, 241, 276, 285, 715, 1141
LmnI GCTCC 2 cut(s) 191, 971
Lsp1109I GCAGC 3 cut(s) 654, 833, 1009
LweI GCATC 4 cut(s) 438, 712, 928, 976
MaeI CTAG 7 cut(s) 188, 366, 510, 545, 990, 1182, 1202
MaeII ACGT 4 cut(s) 6, 477, 808, 1243
MaeIII GTNAC 3 cut(s) 139, 412, 1285
MalI GATC 6 cut(s) 156, 243, 278, 287, 717, 1143
MbiI CCGCTC 1 cut(s) 535
MboI GATC 6 cut(s) 154, 241, 276, 285, 715, 1141
MboII GAAGA 5 cut(s) 106, 413, 560, 786, 1061
MfeI CAATTG 1 cut(s) 1275
MflI RGATCY 4 cut(s) 154, 241, 276, 285
MluCI AATT 5 cut(s) 865, 888, 1044, 1275, 1293
MlyI GAGTC 5 cut(s) 379, 520, 554, 872, 1277
MmeI TCCRAC 2 cut(s) 313, 659
MroI TCCGGA 1 cut(s) 157
MseI TTAA 3 cut(s) 261, 597, 672
MslI CAYNNNNRTG 2 cut(s) 338, 441
MspA1I CMGCKG 2 cut(s) 824, 1031
MspCI CTTAAG 1 cut(s) 596
MspI CCGG 2 cut(s) 158, 417
MspR9I CCNGG 1 cut(s) 1236
MunI CAATTG 1 cut(s) 1275
Mva1269I GAATGC 1 cut(s) 259
MvaI CCWGG 1 cut(s) 1236
MvnI CGCG 2 cut(s) 82, 1031
MwoI GCNNNNNNNGC 2 cut(s) 311, 1028
NcoI CCATGG 1 cut(s) 105
NdeI CATATG 1 cut(s) 268
NdeII GATC 6 cut(s) 154, 241, 276, 285, 715, 1141
NheI GCTAGC 1 cut(s) 989
NlaIII CATG 4 cut(s) 109, 284, 337, 1224
NlaIV GGNNCC 2 cut(s) 103, 156
NmuCI GTSAC 3 cut(s) 139, 412, 1285
PaeR7I CTCGAG 1 cut(s) 149
PceI AGGCCT 2 cut(s) 211, 959
PcsI WCGNNNNNNNCGW 1 cut(s) 1009
PctI GAATGC 1 cut(s) 259
PfeI GAWTC 1 cut(s) 22
PfoI TCCNGGA 1 cut(s) 1234
PinAI ACCGGT 1 cut(s) 416
PkrI GCNGC 3 cut(s) 644, 823, 1024
PleI GAGTC 5 cut(s) 379, 520, 554, 872, 1276
PpsI GAGTC 5 cut(s) 379, 520, 554, 872, 1276
Ppu21I YACGTR 1 cut(s) 809
PshAI GACNNNNGTC 1 cut(s) 693
Psp6I CCWGG 1 cut(s) 1234
PspEI GGTNACC 1 cut(s) 412
PspGI CCWGG 1 cut(s) 1234
PspN4I GGNNCC 2 cut(s) 103, 156
PspPI GGNCC 4 cut(s) 101, 371, 701, 902
PspXI VCTCGAGB 1 cut(s) 149
PstI CTGCAG 1 cut(s) 823
PsuI RGATCY 4 cut(s) 154, 241, 276, 285
RsaI GTAC 2 cut(s) 59, 666
RsaNI GTAC 2 cut(s) 58, 665
RseI CAYNNNNRTG 2 cut(s) 338, 441
SacII CCGCGG 1 cut(s) 1032
SaqAI TTAA 3 cut(s) 261, 597, 672
SatI GCNGC 3 cut(s) 643, 822, 1023
Sau3AI GATC 6 cut(s) 154, 241, 276, 285, 715, 1141
Sau96I GGNCC 4 cut(s) 101, 371, 701, 902
SchI GAGTC 5 cut(s) 379, 520, 554, 872, 1277
ScrFI CCNGG 1 cut(s) 1236
SfaNI GCATC 4 cut(s) 438, 712, 928, 976
SfcI CTRYAG 2 cut(s) 819, 897
Sfr274I CTCGAG 1 cut(s) 149
Sfr303I CCGCGG 1 cut(s) 1032
SgrAI CRCCGGYG 1 cut(s) 416
SgrBI CCGCGG 1 cut(s) 1032
SinI GGWCC 2 cut(s) 371, 902
SlaI CTCGAG 1 cut(s) 149
SmiMI CAYNNNNRTG 2 cut(s) 338, 441
SmlI CTYRAG 4 cut(s) 149, 596, 752, 830
SmoI CTYRAG 4 cut(s) 149, 596, 752, 830
SpeI ACTAGT 2 cut(s) 365, 1181
Sse9I AATT 5 cut(s) 865, 888, 1044, 1275, 1293
SseBI AGGCCT 2 cut(s) 211, 959
SsiI CCGC 5 cut(s) 428, 533, 824, 1029, 1031
SspI AATATT 1 cut(s) 318
SspMI CTAG 7 cut(s) 188, 366, 510, 545, 990, 1182, 1202
StuI AGGCCT 2 cut(s) 211, 959
StyD4I CCNGG 1 cut(s) 1234
StyI CCWWGG 2 cut(s) 105, 912
TaaI ACNGT 1 cut(s) 502
TaiI ACGT 4 cut(s) 9, 480, 811, 1246
TaqI TCGA 1 cut(s) 150
TasI AATT 5 cut(s) 865, 888, 1044, 1275, 1293
TatI WGTACW 1 cut(s) 664
TfiI GAWTC 1 cut(s) 22
Tru1I TTAA 3 cut(s) 261, 597, 672
Tru9I TTAA 3 cut(s) 261, 597, 672
TscAI CASTG 1 cut(s) 381
TseFI GTSAC 3 cut(s) 139, 412, 1285
TseI GCWGC 3 cut(s) 642, 821, 1022
Tsp45I GTSAC 3 cut(s) 139, 412, 1285
TspDTI ATGAA 4 cut(s) 17, 1076, 1137, 1209
TspGWI ACGGA 2 cut(s) 1001, 1141
TspRI CASTG 1 cut(s) 381
Vha464I CTTAAG 1 cut(s) 596
VpaK11BI GGWCC 2 cut(s) 371, 902
XbaI TCTAGA 1 cut(s) 544
XhoI CTCGAG 1 cut(s) 149
XspI CTAG 7 cut(s) 188, 366, 510, 545, 990, 1182, 1202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.