Rmu_sc0006912.1_g000008

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006912.1
OG0000179
Physical Location & Seq
Reverse (-)
37950 .. 41176
3227 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006912.1_g000008.1.cds

Sequence Viewer

Length: 1530 bp
atggtggatatcgccgctagaggattccacagagacgaccagacggaggagacggaccagctgaccaagtttcactaccagagatcaccagtgttgcgagttctagccgggtcggatcgccagctgctgaagagctttctgcaacaagcaaagggagtcaacagagctctattggtttctcacctaccacaagctctgcaaggaaggccaagggcagaaagtgaagatagcttcatggatactatactggaaattattcagctgctcttccttttcattatatatacgtggctagcagagtattttggcacccactttcaatctccacttcccaatgacctaaggccccatatggttctcttctccggagaattttcagctaagcattttggggactcacaggctctttctttgttcaatgcatgtgacaatgtgaggatggatgcatttgccaggccatacagtccatatcggtttagtcgacagtttggttatgtccaagacatttctggcagctttaagagtgacatttgcactggcgtattggctttgatttataagcattgggattcttacaccagaatgaacaccaagtgtgtggtaacattgccgatccaaagtgctatcacagagtacatggttacccgagactatgtcaattggtggtctaaagcgtaccgttctacaccagtaaagacaacgaaagtagcgcctcctaatggaccactacacaagtctctgaaagcaaaagaggataagaacatcacctgtacagcactacctcatcgcaaaaatgtgattccttgtgaagttgaatgtatcaccaacgttcctgcgcctcctaataggactttgcttccaaatagtgattgtcagactcatcctctcaacactctagaagacgatggggactcgatctttagattctcacgtcgctttggtccatcagctcaagctgaaaaaacctgccatcaaagaaagaaggctcttggccctacttattgcgatcccaatactgagtttactctaaatactgactttcttggtgatgttccaacttcttcacaaccgatgcggcaacataatgagggtgcagagattgatggtcatccactttgggggaacgatgatgcctcccctatacgtgttccttctgcagcggaacttgaggcttattctttacccattaaaggaacatccaatgcaaagaatgcctcacagcaaattgaccctacaggtccacttacgaaggtgcatcctcctaagcctctgaacaccatagccatttctgatgcctctcttggtggagttgctattatagatgctagtcaaagacttcgtgatattcgacaacaagctgctaccacagtttgtgatcaaattgaggatatgataatgaagcactcctcaaagaccattttttccagcaagggggaacttgacaagataatagttgagcttagcttttgtaggattgatccttcatccataagaggcaaagttgagggattgttgatcaactactgctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

509

Amino Acids

56.99

Weight (kDa)

7.22

Isoelectric Point (pI)

42.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 558
Acc36I ACCTGC 1 cut(s) 974
AccB1I GGYRCC 1 cut(s) 308
AccI GTMKAC 1 cut(s) 481
AccIII TCCGGA 1 cut(s) 365
AciI CCGC 3 cut(s) 15, 1075, 1160
AclI AACGTT 1 cut(s) 828
AclWI GGATC 4 cut(s) 123, 607, 1001, 1472
AcsI RAATTY 1 cut(s) 371
AcuI CTGAAG 1 cut(s) 149
AdeI CACNNNGTG 1 cut(s) 594
AfaI GTAC 3 cut(s) 635, 677, 772
AfiI CCNNNNNNNGG 5 cut(s) 46, 719, 1118, 1190, 1431
AflIII ACRYGT 1 cut(s) 1144
AgsI TTSAA 3 cut(s) 320, 418, 815
AjiI CACGTC 1 cut(s) 932
AjnI CCWGG 1 cut(s) 452
Alw21I GWGCWC 1 cut(s) 169
Alw26I GTCTC 4 cut(s) 27, 44, 642, 741
AlwI GGATC 4 cut(s) 123, 607, 1001, 1472
AlwNI CAGNNNCTG 1 cut(s) 127
Ama87I CYCGRG 1 cut(s) 645
Aor13HI TCCGGA 1 cut(s) 365
AoxI GGCC 4 cut(s) 206, 344, 455, 991
ApeKI GCWGC 5 cut(s) 124, 262, 513, 1157, 1358
ApoI RAATTY 1 cut(s) 371
Asp700I GAANNNNTTC 1 cut(s) 255
AspLEI GCGC 2 cut(s) 712, 838
AspS9I GGNCC 6 cut(s) 55, 345, 722, 941, 992, 1238
AsuC2I CCSGG 1 cut(s) 109
AsuHPI GGTGA 5 cut(s) 78, 173, 757, 814, 1058
AsuNHI GCTAGC 1 cut(s) 292
AvaI CYCGRG 1 cut(s) 645
AvaII GGWCC 4 cut(s) 55, 722, 941, 1238
AxyI CCTNAGG 1 cut(s) 341
BanI GGYRCC 1 cut(s) 308
BanII GRGCYC 1 cut(s) 169
BbsI GAAGAC 1 cut(s) 906
Bbv12I GWGCWC 1 cut(s) 169
BbvI GCAGC 5 cut(s) 111, 249, 525, 1169, 1345
BccI CCATC 5 cut(s) 433, 899, 952, 978, 1097
BciT130I CCWGG 1 cut(s) 454
BciVI GTATCC 1 cut(s) 232
BclI TGATCA 2 cut(s) 1375, 1515
BcnI CCSGG 1 cut(s) 109
BcoDI GTCTC 4 cut(s) 27, 44, 642, 741
BfaI CTAG 5 cut(s) 18, 104, 293, 896, 1326
BfmI CTRYAG 2 cut(s) 1155, 1233
BfoI RGCGCY 1 cut(s) 713
BfuAI ACCTGC 1 cut(s) 974
BfuI GTATCC 1 cut(s) 232
BisI GCNGC 7 cut(s) 15, 125, 263, 514, 1076, 1158, 1359
BlpI GCTNAGC 2 cut(s) 381, 1460
BlsI GCNGC 7 cut(s) 16, 126, 264, 515, 1077, 1159, 1360
Bme1390I CCNGG 2 cut(s) 109, 454
Bme18I GGWCC 4 cut(s) 55, 722, 941, 1238
BmeT110I CYCGRG 1 cut(s) 645
BmgBI CACGTC 1 cut(s) 932
BmgT120I GGNCC 6 cut(s) 55, 345, 722, 941, 992, 1238
BmiI GGNNCC 2 cut(s) 310, 347
BmrFI CCNGG 2 cut(s) 109, 454
BmsI GCATC 6 cut(s) 433, 1062, 1120, 1264, 1282, 1312
BmtI GCTAGC 1 cut(s) 296
BpiI GAAGAC 1 cut(s) 906
Bpu10I CCTNAGC 1 cut(s) 1263
Bpu1102I GCTNAGC 2 cut(s) 381, 1460
BpuEI CTTGAG 2 cut(s) 936, 1187
BpuMI CCSGG 1 cut(s) 109
BsaAI YACGTR 2 cut(s) 288, 1145
BsaBI GATNNNNATC 1 cut(s) 1107
BsaJI CCNNGG 1 cut(s) 209
BsaWI WCCGGW 1 cut(s) 365
Bsc4I CCNNNNNNNGG 5 cut(s) 46, 719, 1118, 1190, 1431
Bse1I ACTGG 4 cut(s) 89, 252, 541, 689
Bse21I CCTNAGG 1 cut(s) 341
Bse3DI GCAATG 1 cut(s) 605
Bse8I GATNNNNATC 1 cut(s) 1107
BseAI TCCGGA 1 cut(s) 365
BseBI CCWGG 1 cut(s) 454
BseDI CCNNGG 1 cut(s) 209
BseGI GGATG 7 cut(s) 444, 448, 880, 1108, 1196, 1255, 1484
BseJI GATNNNNATC 1 cut(s) 1107
BseLI CCNNNNNNNGG 5 cut(s) 46, 719, 1118, 1190, 1431
BseMI GCAATG 1 cut(s) 605
BseMII CTCAG 1 cut(s) 1008
BseNI ACTGG 4 cut(s) 89, 252, 541, 689
BseRI GAGGAG 2 cut(s) 62, 1396
BseXI GCAGC 5 cut(s) 111, 249, 525, 1169, 1345
BsgI GTGCAG 1 cut(s) 1113
BshFI GGCC 4 cut(s) 208, 346, 457, 993
BshNI GGYRCC 1 cut(s) 308
BsiHKAI GWGCWC 1 cut(s) 169
BsiHKCI CYCGRG 1 cut(s) 645
BsiSI CCGG 2 cut(s) 108, 366
BslFI GGGAC 2 cut(s) 407, 923
BslI CCNNNNNNNGG 5 cut(s) 46, 719, 1118, 1190, 1431
BsmAI GTCTC 4 cut(s) 27, 44, 642, 741
BsmBI CGTCTC 2 cut(s) 27, 44
BsmFI GGGAC 2 cut(s) 407, 923
BsmI GAATGC 1 cut(s) 1216
BsnI GGCC 4 cut(s) 208, 346, 457, 993
BsoBI CYCGRG 1 cut(s) 645
Bsp1286I GDGCHC 1 cut(s) 169
Bsp13I TCCGGA 1 cut(s) 365
Bsp1407I TGTACA 1 cut(s) 770
Bsp143I GATC 8 cut(s) 83, 115, 612, 915, 1006, 1375, 1477, 1515
Bsp1720I GCTNAGC 2 cut(s) 381, 1460
BspACI CCGC 3 cut(s) 15, 1075, 1160
BspANI GGCC 4 cut(s) 208, 346, 457, 993
BspCNI CTCAG 1 cut(s) 1009
BspEI TCCGGA 1 cut(s) 365
BspLI GGNNCC 2 cut(s) 310, 347
BspMAI CTGCAG 1 cut(s) 1159
BspMI ACCTGC 1 cut(s) 974
BspOI GCTAGC 1 cut(s) 296
BspPI GGATC 4 cut(s) 123, 607, 1001, 1472
BspQI GCTCTTC 2 cut(s) 125, 272
BspT107I GGYRCC 1 cut(s) 308
BsrDI GCAATG 1 cut(s) 605
BsrGI TGTACA 1 cut(s) 770
BsrI ACTGG 4 cut(s) 89, 252, 541, 689
BssECI CCNNGG 1 cut(s) 209
BssMI GATC 8 cut(s) 83, 115, 612, 915, 1006, 1375, 1477, 1515
BssT1I CCWWGG 1 cut(s) 209
Bst2UI CCWGG 1 cut(s) 454
Bst4CI ACNGT 4 cut(s) 464, 486, 680, 1369
Bst6I CTCTTC 3 cut(s) 125, 272, 365
BstAPI GCANNNNNTGC 1 cut(s) 1211
BstAUI TGTACA 1 cut(s) 770
BstBAI YACGTR 2 cut(s) 288, 1145
BstC8I GCNNGC 2 cut(s) 122, 294
BstDEI CTNAG 5 cut(s) 341, 381, 1017, 1263, 1460
BstEII GGTNACC 1 cut(s) 640
BstF5I GGATG 7 cut(s) 444, 448, 880, 1108, 1196, 1255, 1484
BstH2I RGCGCY 1 cut(s) 713
BstHHI GCGC 2 cut(s) 712, 838
BstKTI GATC 8 cut(s) 86, 118, 615, 918, 1009, 1378, 1480, 1518
BstMAI GTCTC 4 cut(s) 27, 44, 642, 741
BstMBI GATC 8 cut(s) 83, 115, 612, 915, 1006, 1375, 1477, 1515
BstMWI GCNNNNNNNGC 2 cut(s) 205, 1211
BstNI CCWGG 1 cut(s) 454
BstNSI RCATGY 1 cut(s) 426
BstPI GGTNACC 1 cut(s) 640
BstSCI CCNGG 2 cut(s) 107, 452
BstSFI CTRYAG 2 cut(s) 1155, 1233
BstV1I GCAGC 5 cut(s) 111, 249, 525, 1169, 1345
BstV2I GAAGAC 1 cut(s) 906
BstXI CCANNNNNNTGG 1 cut(s) 598
Bsu36I CCTNAGG 1 cut(s) 341
BsuI GTATCC 1 cut(s) 232
BsuRI GGCC 4 cut(s) 208, 346, 457, 993
BtgZI GCGATG 1 cut(s) 770
BtrI CACGTC 1 cut(s) 932
BtsCI GGATG 7 cut(s) 444, 448, 880, 1108, 1196, 1255, 1484
BtsIMutI CAGTG 2 cut(s) 96, 534
BveI ACCTGC 1 cut(s) 974
Cac8I GCNNGC 2 cut(s) 122, 294
CaiI CAGNNNCTG 1 cut(s) 127
CfoI GCGC 2 cut(s) 712, 838
Cfr13I GGNCC 6 cut(s) 55, 345, 722, 941, 992, 1238
Csp6I GTAC 3 cut(s) 634, 676, 771
CviAII CATG 3 cut(s) 235, 423, 637
CviQI GTAC 3 cut(s) 634, 676, 771
DdeI CTNAG 5 cut(s) 341, 381, 1017, 1263, 1460
DpnI GATC 8 cut(s) 85, 117, 614, 917, 1008, 1377, 1479, 1517
DpnII GATC 8 cut(s) 83, 115, 612, 915, 1006, 1375, 1477, 1515
DraIII CACNNNGTG 1 cut(s) 594
Eam1104I CTCTTC 3 cut(s) 125, 272, 365
EarI CTCTTC 3 cut(s) 125, 272, 365
Ecl136II GAGCTC 1 cut(s) 167
Eco130I CCWWGG 1 cut(s) 209
Eco24I GRGCYC 1 cut(s) 169
Eco32I GATATC 1 cut(s) 10
Eco47I GGWCC 4 cut(s) 55, 722, 941, 1238
Eco53kI GAGCTC 1 cut(s) 167
Eco57I CTGAAG 1 cut(s) 149
Eco81I CCTNAGG 1 cut(s) 341
Eco88I CYCGRG 1 cut(s) 645
Eco91I GGTNACC 1 cut(s) 640
EcoICRI GAGCTC 1 cut(s) 167
EcoO109I RGGNCCY 1 cut(s) 345
EcoO65I GGTNACC 1 cut(s) 640
EcoRII CCWGG 1 cut(s) 452
EcoRV GATATC 1 cut(s) 10
EcoT14I CCWWGG 1 cut(s) 209
EcoT22I ATGCAT 2 cut(s) 424, 448
EcoT38I GRGCYC 1 cut(s) 169
ErhI CCWWGG 1 cut(s) 209
Esp3I CGTCTC 2 cut(s) 27, 44
FaeI CATG 3 cut(s) 238, 426, 640
FaqI GGGAC 2 cut(s) 407, 923
FatI CATG 3 cut(s) 234, 422, 636
FauNDI CATATG 1 cut(s) 351
FbaI TGATCA 2 cut(s) 1375, 1515
FblI GTMKAC 1 cut(s) 481
Fnu4HI GCNGC 7 cut(s) 15, 125, 263, 514, 1076, 1158, 1359
FokI GGATG 7 cut(s) 451, 455, 867, 1095, 1183, 1242, 1471
FriOI GRGCYC 1 cut(s) 169
Fsp4HI GCNGC 7 cut(s) 15, 125, 263, 514, 1076, 1158, 1359
FspBI CTAG 5 cut(s) 18, 104, 293, 896, 1326
GlaI GCGC 2 cut(s) 711, 837
GluI GCNGC 7 cut(s) 15, 125, 263, 514, 1076, 1158, 1359
HaeII RGCGCY 1 cut(s) 713
HaeIII GGCC 4 cut(s) 208, 346, 457, 993
HapII CCGG 2 cut(s) 108, 366
HhaI GCGC 2 cut(s) 712, 838
Hin1II CATG 3 cut(s) 238, 426, 640
Hin6I GCGC 2 cut(s) 710, 836
HinP1I GCGC 2 cut(s) 710, 836
HincII GTYRAC 2 cut(s) 160, 482
HindII GTYRAC 2 cut(s) 160, 482
HinfI GANTC 8 cut(s) 24, 156, 395, 569, 799, 877, 911, 924
HpaII CCGG 2 cut(s) 108, 366
HphI GGTGA 5 cut(s) 78, 173, 757, 814, 1058
Hpy166II GTNNAC 4 cut(s) 160, 482, 1023, 1241
Hpy188I TCNGA 5 cut(s) 115, 741, 876, 1272, 1291
Hpy188III TCNNGA 3 cut(s) 366, 896, 1340
Hpy8I GTNNAC 4 cut(s) 160, 482, 1023, 1241
Hpy99I CGWCG 1 cut(s) 936
HpyAV CCTTC 5 cut(s) 198, 976, 1161, 1243, 1491
HpyCH4III ACNGT 4 cut(s) 464, 486, 680, 1369
HpyCH4IV ACGT 4 cut(s) 287, 828, 931, 1144
HpyCH4V TGCA 9 cut(s) 142, 199, 422, 446, 534, 1094, 1157, 1205, 1255
HpyF10VI GCNNNNNNNGC 2 cut(s) 205, 1211
HpyF3I CTNAG 5 cut(s) 341, 381, 1017, 1263, 1460
HpySE526I ACGT 4 cut(s) 287, 828, 931, 1144
Hsp92II CATG 3 cut(s) 238, 426, 640
HspAI GCGC 2 cut(s) 710, 836
Kpn2I TCCGGA 1 cut(s) 365
Ksp22I TGATCA 2 cut(s) 1375, 1515
Kzo9I GATC 8 cut(s) 83, 115, 612, 915, 1006, 1375, 1477, 1515
LguI GCTCTTC 2 cut(s) 125, 272
Lsp1109I GCAGC 5 cut(s) 111, 249, 525, 1169, 1345
LweI GCATC 6 cut(s) 433, 1062, 1120, 1264, 1282, 1312
MaeI CTAG 5 cut(s) 18, 104, 293, 896, 1326
MaeII ACGT 4 cut(s) 287, 828, 931, 1144
MaeIII GTNAC 4 cut(s) 425, 524, 601, 640
MalI GATC 8 cut(s) 85, 117, 614, 917, 1008, 1377, 1479, 1517
MboI GATC 8 cut(s) 83, 115, 612, 915, 1006, 1375, 1477, 1515
MboII GAAGA 6 cut(s) 142, 236, 259, 352, 911, 1053
MfeI CAATTG 1 cut(s) 658
MhlI GDGCHC 1 cut(s) 169
MluCI AATT 5 cut(s) 252, 371, 658, 1224, 1380
MlyI GAGTC 4 cut(s) 165, 389, 871, 905
MmeI TCCRAC 2 cut(s) 93, 1079
Mph1103I ATGCAT 2 cut(s) 424, 448
MroI TCCGGA 1 cut(s) 365
MroXI GAANNNNTTC 1 cut(s) 255
MseI TTAA 2 cut(s) 519, 1188
MslI CAYNNNNRTG 1 cut(s) 581
MspA1I CMGCKG 4 cut(s) 61, 124, 262, 1160
MspI CCGG 2 cut(s) 108, 366
MspR9I CCNGG 2 cut(s) 109, 454
MunI CAATTG 1 cut(s) 658
Mva1269I GAATGC 1 cut(s) 1216
MvaI CCWGG 1 cut(s) 454
MwoI GCNNNNNNNGC 2 cut(s) 205, 1211
NciI CCSGG 1 cut(s) 109
NdeI CATATG 1 cut(s) 351
NdeII GATC 8 cut(s) 83, 115, 612, 915, 1006, 1375, 1477, 1515
NheI GCTAGC 1 cut(s) 292
NlaIII CATG 3 cut(s) 238, 426, 640
NlaIV GGNNCC 2 cut(s) 310, 347
NmuCI GTSAC 2 cut(s) 425, 524
NsiI ATGCAT 2 cut(s) 424, 448
NspI RCATGY 1 cut(s) 426
PciSI GCTCTTC 2 cut(s) 125, 272
PcsI WCGNNNNNNNCGW 2 cut(s) 478, 1345
PctI GAATGC 1 cut(s) 1216
PdmI GAANNNNTTC 1 cut(s) 255
PfeI GAWTC 4 cut(s) 24, 569, 799, 924
PflFI GACNNNGTC 1 cut(s) 653
PkrI GCNGC 7 cut(s) 16, 126, 264, 515, 1077, 1159, 1360
PleI GAGTC 4 cut(s) 164, 389, 871, 905
PpsI GAGTC 4 cut(s) 164, 389, 871, 905
Ppu21I YACGTR 2 cut(s) 288, 1145
PsiI TTATAA 1 cut(s) 558
Psp124BI GAGCTC 1 cut(s) 169
Psp1406I AACGTT 1 cut(s) 828
Psp6I CCWGG 1 cut(s) 452
PspEI GGTNACC 1 cut(s) 640
PspGI CCWGG 1 cut(s) 452
PspN4I GGNNCC 2 cut(s) 310, 347
PspPI GGNCC 6 cut(s) 55, 345, 722, 941, 992, 1238
PstI CTGCAG 1 cut(s) 1159
PstNI CAGNNNCTG 1 cut(s) 127
PsyI GACNNNGTC 1 cut(s) 653
PvuII CAGCTG 3 cut(s) 61, 124, 262
RsaI GTAC 3 cut(s) 635, 677, 772
RsaNI GTAC 3 cut(s) 634, 676, 771
RseI CAYNNNNRTG 1 cut(s) 581
SacI GAGCTC 1 cut(s) 169
SalI GTCGAC 1 cut(s) 480
SapI GCTCTTC 2 cut(s) 125, 272
SaqAI TTAA 2 cut(s) 519, 1188
SatI GCNGC 7 cut(s) 15, 125, 263, 514, 1076, 1158, 1359
Sau3AI GATC 8 cut(s) 83, 115, 612, 915, 1006, 1375, 1477, 1515
Sau96I GGNCC 6 cut(s) 55, 345, 722, 941, 992, 1238
SchI GAGTC 4 cut(s) 165, 389, 871, 905
ScrFI CCNGG 2 cut(s) 109, 454
SduI GDGCHC 1 cut(s) 169
SfaNI GCATC 6 cut(s) 433, 1062, 1120, 1264, 1282, 1312
SfcI CTRYAG 2 cut(s) 1155, 1233
SinI GGWCC 4 cut(s) 55, 722, 941, 1238
SmiMI CAYNNNNRTG 1 cut(s) 581
SmlI CTYRAG 2 cut(s) 951, 1166
SmoI CTYRAG 2 cut(s) 951, 1166
Sse9I AATT 5 cut(s) 252, 371, 658, 1224, 1380
SsiI CCGC 3 cut(s) 15, 1075, 1160
SspMI CTAG 5 cut(s) 18, 104, 293, 896, 1326
SstI GAGCTC 1 cut(s) 169
StyD4I CCNGG 2 cut(s) 107, 452
StyI CCWWGG 1 cut(s) 209
TaaI ACNGT 4 cut(s) 464, 486, 680, 1369
TaiI ACGT 4 cut(s) 290, 831, 934, 1147
TaqI TCGA 3 cut(s) 481, 914, 1348
TasI AATT 5 cut(s) 252, 371, 658, 1224, 1380
TatI WGTACW 2 cut(s) 633, 770
TauI GCSGC 2 cut(s) 17, 1078
TfiI GAWTC 4 cut(s) 24, 569, 799, 924
Tru1I TTAA 2 cut(s) 519, 1188
Tru9I TTAA 2 cut(s) 519, 1188
TscAI CASTG 2 cut(s) 96, 541
TseFI GTSAC 2 cut(s) 425, 524
TseI GCWGC 5 cut(s) 124, 262, 513, 1157, 1358
Tsp45I GTSAC 2 cut(s) 425, 524
TspDTI ATGAA 5 cut(s) 223, 265, 599, 1412, 1473
TspGWI ACGGA 2 cut(s) 59, 68
TspRI CASTG 2 cut(s) 96, 541
Tth111I GACNNNGTC 1 cut(s) 653
VpaK11BI GGWCC 4 cut(s) 55, 722, 941, 1238
XapI RAATTY 1 cut(s) 371
XbaI TCTAGA 1 cut(s) 895
XceI RCATGY 1 cut(s) 426
XcmI CCANNNNNNNNNTGG 1 cut(s) 506
XmiI GTMKAC 1 cut(s) 481
XmnI GAANNNNTTC 1 cut(s) 255
XspI CTAG 5 cut(s) 18, 104, 293, 896, 1326
Zsp2I ATGCAT 2 cut(s) 424, 448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.