pycom12g03090

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
OG0000179
Physical Location & Seq
Forward (+)
2800415 .. 2802451
2037 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g03090.4

Sequence Viewer

Length: 1125 bp
ATGGCTTGGAATGATGTCTTGTCGACTACCGGAGAAGCTGTTTTTGCTGAGTCTTATTGGGAGTGGCTTGAAGATGTCTTGGGCCGATCTAAACATGTGCTTACTAGTGTGGGCCTTTACCATGTCGTGTACGCATCTTTGTTTAGTTATGATCTCCATCATTCTGTCATTCATGCGTTCTTCGAGCATTGGTGTTCAGCGACTAACACGCTTCATACAGCTCAAGGAGAGATGTCAATTTCACTTTGGGATCTCCACAAGATAGGGGGATTGCCAATCCAAGGTAAGTTTTATGACGAGGTCGTTCCTAGTGCGGAGGAACTTTCTCTCTGCAATAACCGAGGATTGCCTGCGAGTTGTCGCTGTTTATTTTTGGCATATCACAAGCTTTCCCAAGATGCTCGAGGTAAATCAGGCGTGAAGATTTCTTCATCGATCCGCTTCTGGTATTGGGAGGACACAAGGTACAAGAAGTCCTTGAAAAGAAGAAGTTGCAACAAAACCACTAAGCCAAAAGGAGACCCATATCCGTCTGGTGCCATTGGTTCAGCTAGGCGTCGTTCCCCTGCCGAGTTGAGAGCGTTTGAGGACCTTGGCATAGCATCAGAGCATTTTGTTTTTCCAATTGGCGACGTCAACTTTGTTCGTCCTGGGGTTTTCAAAGCTGCTAGCAAGATGGCTACAGGTGAATCTTTCAGTCTTGTTATCCCGGTTTTGGCCAATATTTATAACGGCTTGAGTGTTGTTTCGAACTCGGCAAACACTGAAGATCGTGCTGCGGTTCTTCCCTACCACTATGTGTATGGTTGGTTCGGTGAGTACTTCGGCACTCATTTTTTTTCTTCAACTCTAAACAAGTCAGGACCTTTGATGACGAAGTATTCTGGCATGCTTTCTTCGAAGAGCCTCAATGATTCCCAGGCGCAAGCACTGTTTAGAAGCTGCGAAGGCTTGAAGATGGACTATCTGGCGAGAGTTGGCTCGGTGCGGCGAGGCATCATGGATGATTCGCATCTTCACTTCTCAGACTTATCTTACCTTATAAGTCTTCGCTCAAGGTATACGAGTTCAAGAGTGGAGGCATGCGTTCTATACCTTTCCCAGCTAGCTCTGAGATATCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

375

Amino Acids

41.99

Weight (kDa)

8.81

Isoelectric Point (pI)

49.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 729, 1043
AatII GACGTC 1 cut(s) 636
AccB1I GGYRCC 1 cut(s) 536
AccI GTMKAC 2 cut(s) 23, 1061
AciI CCGC 4 cut(s) 314, 439, 779, 988
AclWI GGATC 2 cut(s) 258, 430
AcoI YGGCCR 1 cut(s) 717
AcuI CTGAAG 1 cut(s) 786
AcyI GRCGYC 2 cut(s) 556, 633
AdeI CACNNNGTG 1 cut(s) 799
AfaI GTAC 3 cut(s) 131, 467, 821
AfiI CCNNNNNNNGG 2 cut(s) 281, 715
AflIII ACRYGT 1 cut(s) 94
AgsI TTSAA 6 cut(s) 71, 481, 661, 846, 955, 1071
AhlI ACTAGT 1 cut(s) 104
AjnI CCWGG 2 cut(s) 649, 918
AluBI AGCT 8 cut(s) 38, 221, 388, 551, 665, 942, 1105, 1109
AluI AGCT 8 cut(s) 38, 221, 388, 551, 665, 942, 1105, 1109
Alw26I GTCTC 1 cut(s) 513
AlwI GGATC 2 cut(s) 258, 430
Ama87I CYCGRG 1 cut(s) 402
AoxI GGCC 3 cut(s) 82, 112, 717
ApeKI GCWGC 3 cut(s) 665, 776, 942
ArsI GACNNNNNNTTYG 2 cut(s) 623, 655
AspLEI GCGC 1 cut(s) 925
AspS9I GGNCC 4 cut(s) 82, 112, 589, 863
AsuC2I CCSGG 1 cut(s) 710
AsuHPI GGTGA 2 cut(s) 698, 827
AsuII TTCGAA 2 cut(s) 749, 899
AsuNHI GCTAGC 2 cut(s) 668, 1105
AvaI CYCGRG 1 cut(s) 402
AvaII GGWCC 2 cut(s) 589, 863
BalI TGGCCA 1 cut(s) 719
BanI GGYRCC 1 cut(s) 536
BbsI GAAGAC 1 cut(s) 1040
BbvI GCAGC 3 cut(s) 652, 763, 929
BccI CCATC 3 cut(s) 165, 670, 952
BceAI ACGGC 1 cut(s) 748
BciT130I CCWGG 2 cut(s) 651, 920
BcnI CCSGG 1 cut(s) 710
BcoDI GTCTC 1 cut(s) 513
BcuI ACTAGT 1 cut(s) 104
BfaI CTAG 5 cut(s) 105, 309, 552, 669, 1106
BfmI CTRYAG 1 cut(s) 681
BisI GCNGC 4 cut(s) 666, 777, 943, 989
BlsI GCNGC 4 cut(s) 667, 778, 944, 990
BmcAI AGTACT 1 cut(s) 821
Bme1390I CCNGG 3 cut(s) 651, 710, 920
Bme18I GGWCC 2 cut(s) 589, 863
BmeT110I CYCGRG 1 cut(s) 402
BmgT120I GGNCC 4 cut(s) 82, 112, 589, 863
BmiI GGNNCC 1 cut(s) 538
BmrFI CCNGG 3 cut(s) 651, 710, 920
BmsI GCATC 5 cut(s) 143, 388, 611, 1005, 1021
BmtI GCTAGC 2 cut(s) 672, 1109
BpiI GAAGAC 1 cut(s) 1040
Bpu14I TTCGAA 2 cut(s) 749, 899
BpuEI CTTGAG 3 cut(s) 207, 757, 1039
BpuMI CCSGG 1 cut(s) 710
Bsa29I ATCGAT 1 cut(s) 434
BsaBI GATNNNNATC 2 cut(s) 156, 1011
BsaHI GRCGYC 2 cut(s) 556, 633
BsaI GGTCTC 1 cut(s) 513
BsaJI CCNNGG 5 cut(s) 280, 340, 592, 650, 918
BsaWI WCCGGW 1 cut(s) 29
BsaXI ACNNNNNCTCC 2 cut(s) 24, 54
Bsc4I CCNNNNNNNGG 2 cut(s) 281, 715
Bse8I GATNNNNATC 2 cut(s) 156, 1011
BseBI CCWGG 2 cut(s) 651, 920
BseCI ATCGAT 1 cut(s) 434
BseDI CCNNGG 5 cut(s) 280, 340, 592, 650, 918
BseGI GGATG 1 cut(s) 1009
BseJI GATNNNNATC 2 cut(s) 156, 1011
BseLI CCNNNNNNNGG 2 cut(s) 281, 715
BseMII CTCAG 3 cut(s) 39, 1038, 1103
BseXI GCAGC 3 cut(s) 652, 763, 929
BseYI CCCAGC 1 cut(s) 1101
BshFI GGCC 3 cut(s) 84, 114, 719
BshNI GGYRCC 1 cut(s) 536
BshVI ATCGAT 1 cut(s) 434
BsiHKCI CYCGRG 1 cut(s) 402
BsiSI CCGG 2 cut(s) 30, 710
BslI CCNNNNNNNGG 2 cut(s) 281, 715
BsmAI GTCTC 1 cut(s) 513
BsnI GGCC 3 cut(s) 84, 114, 719
Bso31I GGTCTC 1 cut(s) 513
BsoBI CYCGRG 1 cut(s) 402
Bsp119I TTCGAA 2 cut(s) 749, 899
Bsp143I GATC 5 cut(s) 86, 151, 250, 435, 769
BspACI CCGC 4 cut(s) 314, 439, 779, 988
BspANI GGCC 3 cut(s) 84, 114, 719
BspCNI CTCAG 3 cut(s) 40, 1037, 1104
BspDI ATCGAT 1 cut(s) 434
BspLI GGNNCC 1 cut(s) 538
BspOI GCTAGC 2 cut(s) 672, 1109
BspPI GGATC 2 cut(s) 258, 430
BspQI GCTCTTC 1 cut(s) 896
BspT104I TTCGAA 2 cut(s) 749, 899
BspT107I GGYRCC 1 cut(s) 536
BspTNI GGTCTC 1 cut(s) 513
BssECI CCNNGG 5 cut(s) 280, 340, 592, 650, 918
BssMI GATC 5 cut(s) 86, 151, 250, 435, 769
BssNAI GTATAC 1 cut(s) 1062
BssNI GRCGYC 2 cut(s) 556, 633
BssT1I CCWWGG 2 cut(s) 280, 592
Bst1107I GTATAC 1 cut(s) 1062
Bst2UI CCWGG 2 cut(s) 651, 920
Bst4CI ACNGT 1 cut(s) 933
Bst6I CTCTTC 1 cut(s) 896
BstACI GRCGYC 2 cut(s) 556, 633
BstBI TTCGAA 2 cut(s) 749, 899
BstC8I GCNNGC 6 cut(s) 351, 670, 890, 927, 1084, 1107
BstDEI CTNAG 4 cut(s) 48, 507, 1024, 1112
BstF5I GGATG 1 cut(s) 1009
BstHHI GCGC 1 cut(s) 925
BstKTI GATC 5 cut(s) 89, 154, 253, 438, 772
BstMAI GTCTC 1 cut(s) 513
BstMBI GATC 5 cut(s) 86, 151, 250, 435, 769
BstMWI GCNNNNNNNGC 2 cut(s) 44, 948
BstNI CCWGG 2 cut(s) 651, 920
BstNSI RCATGY 3 cut(s) 98, 892, 1086
BstSCI CCNGG 3 cut(s) 649, 708, 918
BstSFI CTRYAG 1 cut(s) 681
BstV1I GCAGC 3 cut(s) 652, 763, 929
BstV2I GAAGAC 1 cut(s) 1040
BstX2I RGATCY 1 cut(s) 250
BstYI RGATCY 1 cut(s) 250
BstZ17I GTATAC 1 cut(s) 1062
Bsu15I ATCGAT 1 cut(s) 434
BsuRI GGCC 3 cut(s) 84, 114, 719
BsuTUI ATCGAT 1 cut(s) 434
BtsCI GGATG 1 cut(s) 1009
BtsIMutI CAGTG 2 cut(s) 762, 929
Cac8I GCNNGC 6 cut(s) 351, 670, 890, 927, 1084, 1107
CfoI GCGC 1 cut(s) 925
Cfr13I GGNCC 4 cut(s) 82, 112, 589, 863
ClaI ATCGAT 1 cut(s) 434
CseI GACGC 1 cut(s) 545
Csp6I GTAC 3 cut(s) 130, 466, 820
CviAII CATG 6 cut(s) 95, 122, 173, 889, 1000, 1083
CviQI GTAC 3 cut(s) 130, 466, 820
DdeI CTNAG 4 cut(s) 48, 507, 1024, 1112
DpnI GATC 5 cut(s) 88, 153, 252, 437, 771
DpnII GATC 5 cut(s) 86, 151, 250, 435, 769
DraIII CACNNNGTG 1 cut(s) 799
EaeI YGGCCR 1 cut(s) 717
Eam1104I CTCTTC 1 cut(s) 896
EarI CTCTTC 1 cut(s) 896
Eco130I CCWWGG 2 cut(s) 280, 592
Eco31I GGTCTC 1 cut(s) 513
Eco32I GATATC 1 cut(s) 1118
Eco47I GGWCC 2 cut(s) 589, 863
Eco57I CTGAAG 1 cut(s) 786
Eco88I CYCGRG 1 cut(s) 402
EcoO109I RGGNCCY 2 cut(s) 589, 863
EcoRII CCWGG 2 cut(s) 649, 918
EcoRV GATATC 1 cut(s) 1118
EcoT14I CCWWGG 2 cut(s) 280, 592
ErhI CCWWGG 2 cut(s) 280, 592
FaeI CATG 6 cut(s) 98, 125, 176, 892, 1003, 1086
FalI AAGNNNNNCTT 2 cut(s) 461, 493
FatI CATG 6 cut(s) 94, 121, 172, 888, 999, 1082
FblI GTMKAC 2 cut(s) 23, 1061
Fnu4HI GCNGC 4 cut(s) 666, 777, 943, 989
FokI GGATG 1 cut(s) 1016
Fsp4HI GCNGC 4 cut(s) 666, 777, 943, 989
FspBI CTAG 5 cut(s) 105, 309, 552, 669, 1106
GlaI GCGC 1 cut(s) 924
GluI GCNGC 4 cut(s) 666, 777, 943, 989
GsaI CCCAGC 1 cut(s) 1105
HaeIII GGCC 3 cut(s) 84, 114, 719
HapII CCGG 2 cut(s) 30, 710
HgaI GACGC 1 cut(s) 545
HhaI GCGC 1 cut(s) 925
Hin1I GRCGYC 2 cut(s) 556, 633
Hin1II CATG 6 cut(s) 98, 125, 176, 892, 1003, 1086
Hin6I GCGC 1 cut(s) 923
HinP1I GCGC 1 cut(s) 923
HincII GTYRAC 2 cut(s) 24, 637
HindII GTYRAC 2 cut(s) 24, 637
HindIII AAGCTT 1 cut(s) 386
HinfI GANTC 4 cut(s) 50, 689, 914, 1007
HpaII CCGG 2 cut(s) 30, 710
HphI GGTGA 2 cut(s) 698, 827
Hpy166II GTNNAC 4 cut(s) 24, 130, 637, 1062
Hpy188I TCNGA 4 cut(s) 607, 1027, 1113, 1124
Hpy188III TCNNGA 2 cut(s) 861, 1071
Hpy8I GTNNAC 4 cut(s) 24, 130, 637, 1062
Hpy99I CGWCG 2 cut(s) 561, 635
HpyAV CCTTC 1 cut(s) 941
HpyCH4III ACNGT 1 cut(s) 933
HpyCH4IV ACGT 1 cut(s) 633
HpyCH4V TGCA 2 cut(s) 333, 495
HpyF10VI GCNNNNNNNGC 2 cut(s) 44, 948
HpyF3I CTNAG 4 cut(s) 48, 507, 1024, 1112
HpySE526I ACGT 1 cut(s) 633
Hsp92I GRCGYC 2 cut(s) 556, 633
Hsp92II CATG 6 cut(s) 98, 125, 176, 892, 1003, 1086
HspAI GCGC 1 cut(s) 923
Kzo9I GATC 5 cut(s) 86, 151, 250, 435, 769
LguI GCTCTTC 1 cut(s) 896
Lsp1109I GCAGC 3 cut(s) 652, 763, 929
LweI GCATC 5 cut(s) 143, 388, 611, 1005, 1021
MaeI CTAG 5 cut(s) 105, 309, 552, 669, 1106
MaeII ACGT 1 cut(s) 633
MalI GATC 5 cut(s) 88, 153, 252, 437, 771
MboI GATC 5 cut(s) 86, 151, 250, 435, 769
MfeI CAATTG 1 cut(s) 624
MflI RGATCY 1 cut(s) 250
MlsI TGGCCA 1 cut(s) 719
MluCI AATT 2 cut(s) 237, 624
MluNI TGGCCA 1 cut(s) 719
MlyI GAGTC 1 cut(s) 59
MnlI CCTC 9 cut(s) 292, 310, 335, 398, 448, 580, 917, 986, 1072
Mox20I TGGCCA 1 cut(s) 719
MscI TGGCCA 1 cut(s) 719
Msp20I TGGCCA 1 cut(s) 719
MspI CCGG 2 cut(s) 30, 710
MspR9I CCNGG 3 cut(s) 651, 710, 920
MunI CAATTG 1 cut(s) 624
MvaI CCWGG 2 cut(s) 651, 920
MwoI GCNNNNNNNGC 2 cut(s) 44, 948
NciI CCSGG 1 cut(s) 710
NdeII GATC 5 cut(s) 86, 151, 250, 435, 769
NheI GCTAGC 2 cut(s) 668, 1105
NlaIII CATG 6 cut(s) 98, 125, 176, 892, 1003, 1086
NlaIV GGNNCC 1 cut(s) 538
NmeAIII GCCGAG 2 cut(s) 595, 734
NspI RCATGY 3 cut(s) 98, 892, 1086
NspV TTCGAA 2 cut(s) 749, 899
PaeI GCATGC 2 cut(s) 892, 1086
PaeR7I CTCGAG 1 cut(s) 402
PciI ACATGT 1 cut(s) 94
PciSI GCTCTTC 1 cut(s) 896
PfeI GAWTC 3 cut(s) 689, 914, 1007
PflFI GACNNNGTC 1 cut(s) 299
PkrI GCNGC 4 cut(s) 667, 778, 944, 990
PleI GAGTC 1 cut(s) 58
PpsI GAGTC 1 cut(s) 58
PpuMI RGGWCCY 2 cut(s) 589, 863
PscI ACATGT 1 cut(s) 94
PsiI TTATAA 2 cut(s) 729, 1043
Psp5II RGGWCCY 2 cut(s) 589, 863
Psp6I CCWGG 2 cut(s) 649, 918
PspFI CCCAGC 1 cut(s) 1101
PspGI CCWGG 2 cut(s) 649, 918
PspN4I GGNNCC 1 cut(s) 538
PspPI GGNCC 4 cut(s) 82, 112, 589, 863
PspPPI RGGWCCY 2 cut(s) 589, 863
PspXI VCTCGAGB 1 cut(s) 402
PsrI GAACNNNNNNTAC 2 cut(s) 794, 826
PsuI RGATCY 1 cut(s) 250
PsyI GACNNNGTC 1 cut(s) 299
RsaI GTAC 3 cut(s) 131, 467, 821
RsaNI GTAC 3 cut(s) 130, 466, 820
SalI GTCGAC 1 cut(s) 22
SapI GCTCTTC 1 cut(s) 896
SatI GCNGC 4 cut(s) 666, 777, 943, 989
Sau3AI GATC 5 cut(s) 86, 151, 250, 435, 769
Sau96I GGNCC 4 cut(s) 82, 112, 589, 863
ScaI AGTACT 1 cut(s) 821
SchI GAGTC 1 cut(s) 59
ScrFI CCNGG 3 cut(s) 651, 710, 920
SfaNI GCATC 5 cut(s) 143, 388, 611, 1005, 1021
SfcI CTRYAG 1 cut(s) 681
Sfr274I CTCGAG 1 cut(s) 402
SfuI TTCGAA 2 cut(s) 749, 899
SinI GGWCC 2 cut(s) 589, 863
SlaI CTCGAG 1 cut(s) 402
SmlI CTYRAG 4 cut(s) 222, 402, 736, 1054
SmoI CTYRAG 4 cut(s) 222, 402, 736, 1054
SpeI ACTAGT 1 cut(s) 104
SphI GCATGC 2 cut(s) 892, 1086
Sse9I AATT 2 cut(s) 237, 624
SsiI CCGC 4 cut(s) 314, 439, 779, 988
SspI AATATT 1 cut(s) 724
SspMI CTAG 5 cut(s) 105, 309, 552, 669, 1106
StyD4I CCNGG 3 cut(s) 649, 708, 918
StyI CCWWGG 2 cut(s) 280, 592
TaaI ACNGT 1 cut(s) 933
TaiI ACGT 1 cut(s) 636
TaqI TCGA 6 cut(s) 23, 183, 403, 434, 749, 899
TasI AATT 2 cut(s) 237, 624
TatI WGTACW 1 cut(s) 819
TauI GCSGC 1 cut(s) 991
TfiI GAWTC 3 cut(s) 689, 914, 1007
TscAI CASTG 2 cut(s) 769, 936
TseI GCWGC 3 cut(s) 665, 776, 942
TspDTI ATGAA 3 cut(s) 161, 203, 420
TspGWI ACGGA 1 cut(s) 519
TspRI CASTG 2 cut(s) 769, 936
Tth111I GACNNNGTC 1 cut(s) 299
VpaK11BI GGWCC 2 cut(s) 589, 863
XceI RCATGY 3 cut(s) 98, 892, 1086
XcmI CCANNNNNNNNNTGG 1 cut(s) 800
XhoI CTCGAG 1 cut(s) 402
XmiI GTMKAC 2 cut(s) 23, 1061
XspI CTAG 5 cut(s) 105, 309, 552, 669, 1106
ZraI GACGTC 1 cut(s) 634
ZrmI AGTACT 1 cut(s) 821
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.