pycom12424g00130

Plant mobile domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
tig00012424
Physical Location & Seq
Forward (+)
61902 .. 67634
5733 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12424g00130.38

Sequence Viewer

Length: 3909 bp
ATGAGGCCTTGTTGCTTATTTTGTGAGCAATCTTCAATTCTTGATTTTGGACCCCTAACCAAATTTAAGAGAGTTTGTTCTCCTTTTGCCGAATTTAAGGAAGCTTTTTCACTTCCTTTGCTTGATTTGTGCCACATGTCATTGATGACTTGTCCATTTATGATGAGGCATATGCCACGTGGAGCTTTACGATGCATTCATTGTATGCAACGAAATTTACATGTCTACAAATACCCCCATTTCAAGGAGCATTGTAGGCATGTGCTTGTCACATGTAGGAAACGTATTTTGAAGTCTTGCAATGTGAATGTTCTAACTCAAAGGTCGTCGAGACTTGATCTTGAATTAGTTTGCTTCTTTAAGGACCATAGAGCCGCGTGTTTCTTGAACAAATCTTTTCTTCAAGGGCTGTTGAGGGTTAGACTCTTGAACGAAACATTTCTTCAAGGGCCATTGAGGCTTGATCTTGAAAGAAATGACATATTCTCTTCAAGGAAATTGGCGCATACTTGTTGTGCTTTGAATTTTTCCTTGTCGTTAAGACTTACTCCTAAGTGTCAGAATGCTTTTGTGATTTCCTTCAAGGTTTTGGAAAGATTCAATGCTTGTCCTTGGATGAGTAAGATGCGCATTTCCTTTCCATTATTTTCTCTTTTCCCACGGGCACGAAGTAGGGATTTTTTTTTCCTTTCTTCTTTTGATTCCATGGGCAAGGAGGTTTTTTTACTTTCCATTTTTTTGTTTTGGGAACCATGTCCTCTGACTTTCATGCCTAGTTTGAGGTCGATTTCTTTCCTGGAAATTTCTGAAAAATATGGAAACGTAGCTTTATCCCTTATCTTTTCAGGCATATATCTTTCCTATGGCTGCGCAATTCTTGACGAGAAAGCAATTTTTGCGGGAATGACTTTGAAAACTAGAATATTTGGCTTTAGGGAAAATAATGAAATATTGGCCTTGCATCAAAACCGTTCTGAAAAGTTAAGGTCACCAAAAACATCCAACCTGCATAGATTGGTTGAAACTATCCATTTTTTTGCTTGGAGTTTGCTGCCTTCTTTTGGTGGGAATGTGATTTCTTGTTTTGATTTTCCTTTTGCTATTTGGGTATGTATTTCCCTTATAACATTAGGAAGCAATTCCTCTTGCCATGCACTTTGTAGCTGCTTGGAGTCATGGGTTTTCTTTGCTGCTGTGCTTGCTGTGCATATTGTTGCTGCTTTGAGCTTATTGCCGCGCGTCACTTTTACTTGCCTTTTGGTCATAACTTTCCTTGGTTGTGACGCAATCGTGCCTTTTGCCGCTACTACCTCTGTCGTGCCTTGCAGTTGCTGCTTAGAGCTTGTTGTAGTGTGTCATTTTTATCGTGTGGGGTTGTGCAAAAGACTGCAGCATTTTTACGCTCCACCGCTTGGAGCTTCTCACTTTGTTGTGCTTCATCAAGCTTTGTGGCTGATTTCTTTCATCCCTGAGACTTCATCAACATCATCCTTTGATGCTCGTGAGGTTAGTCTCGCAAGTCTTTTGTTTTACAGAAGCAAAAAGAGTTTTTTTTTCTTCTATTTACTTGTTATGCCCTACTCTTGCTTATGTTGCCTTATTTGTTTTGTTGTAGCCATGGTATTTTTCAAGTGTTTCAAGAACAATACCATCACCATTCTCCTTTGTGCACCGTTGACTAGACCTAAAGCACTTGTTTTTCTTGTAAAAGACAACTCAATGCACATTAAGTCATGGTCTTCTGAAGAGTCATGGGAGGTGATGGATTCTGGTCAATCAGCTACAAAGAAGAAGGCATGTACGTTAAAGGTTCTGGTTTTGAACCCTTCACATCATGTTTATGATAATTCACCCGCTTCGTTTGAGCTTCTTGATGATCGCATCTGCAGCAGAGCTGTGACTTGGGGTAGTGCCTTGTCGACTACTGGGGAAGCTGCCTATGTTGAGTTTTGCTGGGAGTGGCTTGAAGATCACGCTGTTTACGCATCTTTGTTTAGCTACGATCGCCATCATTTCATCCTTTGTGCGTTCTTCAAGGAGATGTCGATTTTGCTTTGGGACCTCTATAAGATAGAAGGCTTGCTGATTCAGGGGAAATTTTATGATGAGGTTGTTCCTAGCGTGGATGAGTTTTCTCATCGCAACATCAGGCGTGAAGATGTCTTCATAGATCTGATTTTGGTTTTGGGATGCTATGAAGTACAAGAATCCTTCAAAAAAATATGGCCGCAACGTGCCCTTATCGAGTTGAAAGCGTTTGACGAACTTGGCGTAGCGTCAGAGCATGTGAAAGAATCTTACCTAGCCGCTTTCTTAGCTTGTTGGCTTTCTAAGTTTGTTTTCACCAAAGACGATGTCAACTTTATCTGTCATTCAAGGTATTCTCTCGGAGCAGGAAGCTACACTTTCTCAGCATCAGGAGGAGATTTCACGCCTAGAGCAAGGGAAAAGTGCGACCATGGAAGTGCTTGCTTGAAGATCATCGCCATGGTTTTAGGGACATACCTTTCAAGTAGTGTCTTCCATCTTTTGTACTTTAGGCCTTCTTTGCTTTTGCTTTTTTTTATTCACATTTTGAATTTGCTCTTTATTCTTCAAAGTGTTTGTGTTTTTGTTGATGATGTGATTGTACTTGAAGTTTTGAAGTTTCAAGTTGCCTACGTACCTTTGGTTAAGGAGGGATCAAGTCATGACGTATTTTGTTTTGCCATACATAGTTTATACTTTTGCGGGCCAGGAGCTTTGTGCCGTGTGCAGTTTAGGCTCATGCAGGTGAGGAGCTTTGTGCAGTGTGCACTCGTGCAAACAAGGAGCATTGAGTGTCACCTTTTAAGCTTGTGCAGGCGAGGAGCTTTGTGCTGCTTAGGGGTAGTAGCGTTTCAAGAATTTGCCATTAATAGGGCCGATCTTCAAGCCATCTTCCTACATAAGTATAATGACATAAGTAAGGGTGTTGAACCACAGGGACTGATTAGACCTCTACAAATTACTATGAGTTTGGATTTTGATTTGAGAAGTAAAGATTCAGAAAGGATGGGAATGGAACTAGGGATACCAATTTTACCATTACAAACCAATTCCATAAAAATTAAGTCAAACAACATTCAACTCTTCAATCTGCAACTAGGTACTCCTAATCTGCAACTTAGTTGTGATGTTCAACTTAGATTACCAAATAAGAATCCATTAAGAACAAGAAAACTTCAAAGAACCAAAGAAATTACATGGCAGGATGTATGCATAGCAGTTTCTTTGTTCACTCACATGTCTACCAAGATTAAGCATGATCAAACACTAAGATTATCAAATAAATTAAACTATAAAACTAGTGGAAATCCTTCAAGAACAGTACGGCATTTTGTTACTGGAAGAAAGGCTAAAGAAAGAGAAGAGACAAGTATGGGCGACCCCCTAGGGGGCTTGTGTAAAAGTGATCTGAAACCTTACCCAACCATTAAGCCAAAGGAGCACACAAGGGGATGGGAATTAGGCCTTTTAGTGGTGATAATAAACACATGGTATCTGCAACATAAGATTATTCTTAGCATTCAATCAAAGAGAAATAATGAGATAATTTTAAGTGAAGTAGTCTCCACTATTCTGCTTCCAGAATTTGAGCATGATACTTTAACCATCATAATTCCAAGAATAACAACTTTAGTTTTGTTTGTAAACATAGCCCTCATATACATTCACATTAGTAAGCAAAATCTAACACTCAAATTAAACCATATTTGTGACAATTGTAGTATATATGCAAGTAGAGATCGTTCTAACTGGGGATTAACTAGGGATGACTCAAAACAACTTAAAAAGACTCAAAACAGCCCAAAACACTCAAATACACTCAAATTAGACTCTAAAGGTTGGACAGATTCAAACACTTTTCTAATTAATCTAACACAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1303

Amino Acids

148.8

Weight (kDa)

8.92

Isoelectric Point (pI)

48.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1124
AarI CACCTGC 1 cut(s) 2761
Acc16I TGCGCA 2 cut(s) 629, 871
Acc36I ACCTGC 2 cut(s) 1014, 2761
AccB7I CCANNNNNTGG 1 cut(s) 1412
AccI GTMKAC 3 cut(s) 225, 1919, 3269
AccII CGCG 3 cut(s) 377, 1237, 1239
AciI CCGC 9 cut(s) 375, 899, 1235, 1302, 1409, 1854, 2228, 2307, 2730
AclWI GGATC 1 cut(s) 2689
AcoI YGGCCR 1 cut(s) 2225
AcsI RAATTY 9 cut(s) 62, 92, 214, 523, 801, 2096, 2578, 2885, 3611
AcuI CTGAAG 1 cut(s) 1764
AcvI CACGTG 1 cut(s) 179
AfaI GTAC 7 cut(s) 1801, 2202, 2534, 2631, 2664, 3130, 3351
AfiI CCNNNNNNNGG 7 cut(s) 244, 1061, 1412, 2898, 3415, 3416, 3499
AflIII ACRYGT 4 cut(s) 135, 220, 272, 3264
AhlI ACTAGT 1 cut(s) 3326
AjnI CCWGG 2 cut(s) 795, 2734
Alw21I GWGCWC 3 cut(s) 1672, 2797, 3471
Alw26I GTCTC 5 cut(s) 325, 1466, 1517, 3386, 3595
Alw44I GTGCAC 2 cut(s) 1668, 2793
AlwI GGATC 1 cut(s) 2689
AlwNI CAGNNNCTG 2 cut(s) 1332, 2968
AoxI GGCC 8 cut(s) 5, 449, 954, 2225, 2540, 2732, 2901, 3490
ApaLI GTGCAC 2 cut(s) 1668, 2793
ApoI RAATTY 9 cut(s) 62, 92, 214, 523, 801, 2096, 2578, 2885, 3611
ArsI GACNNNNNNTTYG 2 cut(s) 2340, 2372
AseI ATTAAT 2 cut(s) 2895, 3894
Asp700I GAANNNNTTC 3 cut(s) 438, 1138, 3337
AspA2I CCTAGG 1 cut(s) 3412
AspLEI GCGC 4 cut(s) 505, 630, 872, 1239
AspS9I GGNCC 6 cut(s) 50, 364, 449, 2059, 2732, 2901
AsuHPI GGTGA 8 cut(s) 981, 1645, 1771, 1842, 2335, 2785, 2816, 3514
AvaII GGWCC 3 cut(s) 50, 364, 2059
AvrII CCTAGG 1 cut(s) 3412
BaeGI GKGCMC 4 cut(s) 667, 1672, 2239, 2797
BauI CACGAG 2 cut(s) 1500, 2798
BbrPI CACGTG 1 cut(s) 179
BbsI GAAGAC 3 cut(s) 1731, 2155, 2512
Bbv12I GWGCWC 3 cut(s) 1672, 2797, 3471
BccI CCATC 8 cut(s) 1658, 1756, 2016, 2532, 2924, 3028, 3474, 3641
BceAI ACGGC 2 cut(s) 2733, 3368
BciT130I CCWGG 2 cut(s) 797, 2736
BciVI GTATCC 1 cut(s) 3045
BclI TGATCA 1 cut(s) 3286
BcoDI GTCTC 5 cut(s) 325, 1466, 1517, 3386, 3595
BcuI ACTAGT 1 cut(s) 3326
BfmI CTRYAG 2 cut(s) 1388, 1885
BfuAI ACCTGC 2 cut(s) 1014, 2761
BfuI GTATCC 1 cut(s) 3045
BglI GCCNNNNNGGC 1 cut(s) 457
BglII AGATCT 1 cut(s) 2170
BlnI CCTAGG 1 cut(s) 3412
Bme1390I CCNGG 2 cut(s) 797, 2736
Bme18I GGWCC 3 cut(s) 50, 364, 2059
BmgT120I GGNCC 6 cut(s) 50, 364, 449, 2059, 2732, 2901
BmiI GGNNCC 3 cut(s) 52, 750, 2060
BmrFI CCNGG 2 cut(s) 797, 2736
BmrI ACTGGG 2 cut(s) 1935, 3787
BmsI GCATC 8 cut(s) 182, 615, 970, 1486, 1890, 1994, 2180, 2423
BmuI ACTGGG 2 cut(s) 1935, 3787
BpiI GAAGAC 3 cut(s) 1731, 2155, 2512
Bpu10I CCTNAGC 1 cut(s) 2863
BsaAI YACGTR 2 cut(s) 179, 2662
BsaBI GATNNNNATC 1 cut(s) 2007
BsaJI CCNNGG 8 cut(s) 611, 659, 705, 1273, 1617, 2458, 2487, 3412
Bsc4I CCNNNNNNNGG 7 cut(s) 244, 1061, 1412, 2898, 3415, 3416, 3499
Bse1I ACTGG 3 cut(s) 1930, 3370, 3782
Bse3DI GCAATG 1 cut(s) 307
Bse8I GATNNNNATC 1 cut(s) 2007
BseBI CCWGG 2 cut(s) 797, 2736
BseDI CCNNGG 8 cut(s) 611, 659, 705, 1273, 1617, 2458, 2487, 3412
BseJI GATNNNNATC 1 cut(s) 2007
BseLI CCNNNNNNNGG 7 cut(s) 244, 1061, 1412, 2898, 3415, 3416, 3499
BseMI GCAATG 1 cut(s) 307
BseMII CTCAG 2 cut(s) 1461, 2424
BseNI ACTGG 3 cut(s) 1930, 3370, 3782
BseRI GAGGAG 3 cut(s) 2436, 2791, 2862
BseSI GKGCMC 4 cut(s) 667, 1672, 2239, 2797
BseYI CCCAGC 1 cut(s) 1953
BsgI GTGCAG 3 cut(s) 2774, 2807, 2860
Bsh1236I CGCG 3 cut(s) 377, 1237, 1239
Bsh1285I CGRYCG 1 cut(s) 2005
BshFI GGCC 8 cut(s) 7, 451, 956, 2227, 2542, 2734, 2903, 3492
BsiEI CGRYCG 1 cut(s) 2005
BsiHKAI GWGCWC 3 cut(s) 1672, 2797, 3471
BslFI GGGAC 3 cut(s) 2072, 2512, 2979
BslI CCNNNNNNNGG 7 cut(s) 244, 1061, 1412, 2898, 3415, 3416, 3499
BsmAI GTCTC 5 cut(s) 325, 1466, 1517, 3386, 3595
BsmFI GGGAC 3 cut(s) 2072, 2512, 2979
BsmI GAATGC 3 cut(s) 195, 568, 3546
BsnI GGCC 8 cut(s) 7, 451, 956, 2227, 2542, 2734, 2903, 3492
Bsp1286I GDGCHC 5 cut(s) 667, 1672, 2239, 2797, 3471
Bsp19I CCATGG 4 cut(s) 705, 1617, 2458, 2487
BspACI CCGC 9 cut(s) 375, 899, 1235, 1302, 1409, 1854, 2228, 2307, 2730
BspANI GGCC 8 cut(s) 7, 451, 956, 2227, 2542, 2734, 2903, 3492
BspCNI CTCAG 2 cut(s) 1462, 2423
BspFNI CGCG 3 cut(s) 377, 1237, 1239
BspHI TCATGA 1 cut(s) 2689
BspLI GGNNCC 3 cut(s) 52, 750, 2060
BspMAI CTGCAG 2 cut(s) 1392, 1889
BspMI ACCTGC 2 cut(s) 1014, 2761
BspPI GGATC 1 cut(s) 2689
BsrDI GCAATG 1 cut(s) 307
BsrI ACTGG 3 cut(s) 1930, 3370, 3782
BssECI CCNNGG 8 cut(s) 611, 659, 705, 1273, 1617, 2458, 2487, 3412
BssSI CACGAG 2 cut(s) 1500, 2798
BssT1I CCWWGG 7 cut(s) 611, 705, 1273, 1617, 2458, 2487, 3412
Bst2BI CACGAG 2 cut(s) 1500, 2798
Bst2UI CCWGG 2 cut(s) 797, 2736
Bst4CI ACNGT 3 cut(s) 971, 1674, 3349
Bst6I CTCTTC 4 cut(s) 493, 1740, 3116, 3384
BstAPI GCANNNNNTGC 2 cut(s) 896, 1332
BstBAI YACGTR 2 cut(s) 179, 2662
BstC8I GCNNGC 5 cut(s) 1200, 2081, 2470, 2732, 2843
BstDSI CCRYGG 5 cut(s) 659, 705, 1617, 2458, 2487
BstEII GGTNACC 1 cut(s) 987
BstFNI CGCG 3 cut(s) 377, 1237, 1239
BstHHI GCGC 4 cut(s) 505, 630, 872, 1239
BstMAI GTCTC 5 cut(s) 325, 1466, 1517, 3386, 3595
BstMCI CGRYCG 1 cut(s) 2005
BstNI CCWGG 2 cut(s) 797, 2736
BstNSI RCATGY 7 cut(s) 139, 224, 263, 276, 1800, 2288, 3268
BstPI GGTNACC 1 cut(s) 987
BstSCI CCNGG 2 cut(s) 795, 2734
BstSFI CTRYAG 2 cut(s) 1388, 1885
BstSLI GKGCMC 4 cut(s) 667, 1672, 2239, 2797
BstSNI TACGTA 1 cut(s) 2662
BstUI CGCG 3 cut(s) 377, 1237, 1239
BstV2I GAAGAC 3 cut(s) 1731, 2155, 2512
BstX2I RGATCY 1 cut(s) 2170
BstYI RGATCY 1 cut(s) 2170
BsuI GTATCC 1 cut(s) 3045
BsuRI GGCC 8 cut(s) 7, 451, 956, 2227, 2542, 2734, 2903, 3492
BtgI CCRYGG 5 cut(s) 659, 705, 1617, 2458, 2487
BtgZI GCGATG 2 cut(s) 2123, 2467
BtsI GCAGTG 1 cut(s) 2795
BtsIMutI CAGTG 1 cut(s) 2795
BveI ACCTGC 2 cut(s) 1014, 2761
Cac8I GCNNGC 5 cut(s) 1200, 2081, 2470, 2732, 2843
CaiI CAGNNNCTG 2 cut(s) 1332, 2968
CciI TCATGA 1 cut(s) 2689
CfoI GCGC 4 cut(s) 505, 630, 872, 1239
Cfr13I GGNCC 6 cut(s) 50, 364, 449, 2059, 2732, 2901
CseI GACGC 3 cut(s) 1228, 1292, 2265
Csp6I GTAC 7 cut(s) 1800, 2201, 2533, 2630, 2663, 3129, 3350
CspCI CAANNNNNGTGG 2 cut(s) 1430, 1465
CviQI GTAC 7 cut(s) 1800, 2201, 2533, 2630, 2663, 3129, 3350
EaeI YGGCCR 1 cut(s) 2225
Eam1104I CTCTTC 4 cut(s) 493, 1740, 3116, 3384
EarI CTCTTC 4 cut(s) 493, 1740, 3116, 3384
Eco105I TACGTA 1 cut(s) 2662
Eco130I CCWWGG 7 cut(s) 611, 705, 1273, 1617, 2458, 2487, 3412
Eco147I AGGCCT 3 cut(s) 7, 2542, 3492
Eco47I GGWCC 3 cut(s) 50, 364, 2059
Eco57I CTGAAG 1 cut(s) 1764
Eco72I CACGTG 1 cut(s) 179
Eco91I GGTNACC 1 cut(s) 987
EcoO109I RGGNCCY 1 cut(s) 2059
EcoO65I GGTNACC 1 cut(s) 987
EcoRII CCWGG 2 cut(s) 795, 2734
EcoT14I CCWWGG 7 cut(s) 611, 705, 1273, 1617, 2458, 2487, 3412
EcoT22I ATGCAT 2 cut(s) 197, 3242
ErhI CCWWGG 7 cut(s) 611, 705, 1273, 1617, 2458, 2487, 3412
FalI AAGNNNNNCTT 2 cut(s) 2389, 2421
FaqI GGGAC 3 cut(s) 2072, 2512, 2979
FauI CCCGC 3 cut(s) 892, 1861, 2723
FauNDI CATATG 1 cut(s) 171
FbaI TGATCA 1 cut(s) 3286
FblI GTMKAC 3 cut(s) 225, 1919, 3269
FspAI RTGCGCAY 1 cut(s) 629
FspI TGCGCA 2 cut(s) 629, 871
GlaI GCGC 4 cut(s) 504, 629, 871, 1238
GsaI CCCAGC 1 cut(s) 1957
HaeIII GGCC 8 cut(s) 7, 451, 956, 2227, 2542, 2734, 2903, 3492
HgaI GACGC 3 cut(s) 1228, 1292, 2265
HhaI GCGC 4 cut(s) 505, 630, 872, 1239
Hin6I GCGC 4 cut(s) 503, 628, 870, 1237
HinP1I GCGC 4 cut(s) 503, 628, 870, 1237
HincII GTYRAC 3 cut(s) 1677, 1920, 2359
HindII GTYRAC 3 cut(s) 1677, 1920, 2359
HindIII AAGCTT 3 cut(s) 102, 1443, 2833
HphI GGTGA 8 cut(s) 981, 1645, 1771, 1842, 2335, 2785, 2816, 3514
Hpy99I CGWCG 1 cut(s) 331
HpyAV CCTTC 8 cut(s) 589, 1065, 1786, 1836, 2069, 2221, 2553, 3348
HpyCH4III ACNGT 3 cut(s) 971, 1674, 3349
HpyCH4IV ACGT 7 cut(s) 178, 283, 822, 1802, 2233, 2661, 2694
HpySE526I ACGT 7 cut(s) 178, 283, 822, 1802, 2233, 2661, 2694
HspAI GCGC 4 cut(s) 503, 628, 870, 1237
Ksp22I TGATCA 1 cut(s) 3286
LweI GCATC 8 cut(s) 182, 615, 970, 1486, 1890, 1994, 2180, 2423
MaeII ACGT 7 cut(s) 178, 283, 822, 1802, 2233, 2661, 2694
MaeIII GTNAC 8 cut(s) 268, 987, 1240, 1280, 1897, 2822, 3361, 3737
MfeI CAATTG 1 cut(s) 3742
MflI RGATCY 1 cut(s) 2170
MhlI GDGCHC 5 cut(s) 667, 1672, 2239, 2797, 3471
MlyI GAGTC 6 cut(s) 417, 1181, 1757, 3791, 3811, 3851
MmeI TCCRAC 2 cut(s) 1026, 3848
Mph1103I ATGCAT 2 cut(s) 197, 3242
MroXI GAANNNNTTC 3 cut(s) 438, 1138, 3337
MslI CAYNNNNRTG 6 cut(s) 1839, 2463, 2486, 2771, 3263, 3735
MspR9I CCNGG 2 cut(s) 797, 2736
MunI CAATTG 1 cut(s) 3742
Mva1269I GAATGC 3 cut(s) 195, 568, 3546
MvaI CCWGG 2 cut(s) 797, 2736
MvnI CGCG 3 cut(s) 377, 1237, 1239
NcoI CCATGG 4 cut(s) 705, 1617, 2458, 2487
NdeI CATATG 1 cut(s) 171
NlaIV GGNNCC 3 cut(s) 52, 750, 2060
NmuCI GTSAC 7 cut(s) 268, 987, 1240, 1280, 1897, 2822, 3737
NsbI TGCGCA 2 cut(s) 629, 871
NsiI ATGCAT 2 cut(s) 197, 3242
NspI RCATGY 7 cut(s) 139, 224, 263, 276, 1800, 2288, 3268
PagI TCATGA 1 cut(s) 2689
PaqCI CACCTGC 1 cut(s) 2761
PceI AGGCCT 3 cut(s) 7, 2542, 3492
PciI ACATGT 4 cut(s) 135, 220, 272, 3264
PcsI WCGNNNNNNNCGW 1 cut(s) 2268
PctI GAATGC 3 cut(s) 195, 568, 3546
PdmI GAANNNNTTC 3 cut(s) 438, 1138, 3337
PfeI GAWTC 9 cut(s) 597, 701, 1766, 2086, 2207, 2294, 3023, 3181, 3875
PflFI GACNNNGTC 1 cut(s) 2354
PflMI CCANNNNNTGG 1 cut(s) 1412
PfoI TCCNGGA 1 cut(s) 795
Ple19I CGATCG 1 cut(s) 2005
PleI GAGTC 6 cut(s) 417, 1180, 1756, 3791, 3811, 3851
PmaCI CACGTG 1 cut(s) 179
PmlI CACGTG 1 cut(s) 179
PpsI GAGTC 6 cut(s) 417, 1180, 1756, 3791, 3811, 3851
Ppu21I YACGTR 2 cut(s) 179, 2662
PpuMI RGGWCCY 1 cut(s) 2059
PscI ACATGT 4 cut(s) 135, 220, 272, 3264
PshBI ATTAAT 2 cut(s) 2895, 3894
PsiI TTATAA 1 cut(s) 1124
Psp5II RGGWCCY 1 cut(s) 2059
Psp6I CCWGG 2 cut(s) 795, 2734
PspCI CACGTG 1 cut(s) 179
PspEI GGTNACC 1 cut(s) 987
PspFI CCCAGC 1 cut(s) 1953
PspGI CCWGG 2 cut(s) 795, 2734
PspN4I GGNNCC 3 cut(s) 52, 750, 2060
PspPI GGNCC 6 cut(s) 50, 364, 449, 2059, 2732, 2901
PspPPI RGGWCCY 1 cut(s) 2059
PsrI GAACNNNNNNTAC 4 cut(s) 3036, 3068, 3754, 3786
PstI CTGCAG 2 cut(s) 1392, 1889
PstNI CAGNNNCTG 2 cut(s) 1332, 2968
PsuI RGATCY 1 cut(s) 2170
PsyI GACNNNGTC 1 cut(s) 2354
PvuI CGATCG 1 cut(s) 2005
RsaI GTAC 7 cut(s) 1801, 2202, 2534, 2631, 2664, 3130, 3351
RsaNI GTAC 7 cut(s) 1800, 2201, 2533, 2630, 2663, 3129, 3350
RseI CAYNNNNRTG 6 cut(s) 1839, 2463, 2486, 2771, 3263, 3735
SalI GTCGAC 1 cut(s) 1918
Sau96I GGNCC 6 cut(s) 50, 364, 449, 2059, 2732, 2901
SchI GAGTC 6 cut(s) 417, 1181, 1757, 3791, 3811, 3851
ScrFI CCNGG 2 cut(s) 797, 2736
SduI GDGCHC 5 cut(s) 667, 1672, 2239, 2797, 3471
SfaNI GCATC 8 cut(s) 182, 615, 970, 1486, 1890, 1994, 2180, 2423
SfcI CTRYAG 2 cut(s) 1388, 1885
SinI GGWCC 3 cut(s) 50, 364, 2059
SmiMI CAYNNNNRTG 6 cut(s) 1839, 2463, 2486, 2771, 3263, 3735
SnaBI TACGTA 1 cut(s) 2662
SpeI ACTAGT 1 cut(s) 3326
SseBI AGGCCT 3 cut(s) 7, 2542, 3492
SsiI CCGC 9 cut(s) 375, 899, 1235, 1302, 1409, 1854, 2228, 2307, 2730
SspI AATATT 2 cut(s) 924, 951
StuI AGGCCT 3 cut(s) 7, 2542, 3492
StyD4I CCNGG 2 cut(s) 795, 2734
StyI CCWWGG 7 cut(s) 611, 705, 1273, 1617, 2458, 2487, 3412
TaaI ACNGT 3 cut(s) 971, 1674, 3349
TaiI ACGT 7 cut(s) 181, 286, 825, 1805, 2236, 2664, 2697
TaqI TCGA 5 cut(s) 329, 785, 1919, 2045, 2244
TatI WGTACW 3 cut(s) 2200, 2532, 2629
TauI GCSGC 5 cut(s) 377, 1237, 1304, 2230, 2309
TfiI GAWTC 9 cut(s) 597, 701, 1766, 2086, 2207, 2294, 3023, 3181, 3875
TscAI CASTG 1 cut(s) 2795
TseFI GTSAC 7 cut(s) 268, 987, 1240, 1280, 1897, 2822, 3737
Tsp45I GTSAC 7 cut(s) 268, 987, 1240, 1280, 1897, 2822, 3737
TspDTI ATGAA 9 cut(s) 188, 757, 960, 1427, 1453, 1467, 2005, 2155, 2211
TspRI CASTG 1 cut(s) 2795
Tth111I GACNNNGTC 1 cut(s) 2354
Van91I CCANNNNNTGG 1 cut(s) 1412
VneI GTGCAC 2 cut(s) 1668, 2793
VpaK11BI GGWCC 3 cut(s) 50, 364, 2059
VspI ATTAAT 2 cut(s) 2895, 3894
XapI RAATTY 9 cut(s) 62, 92, 214, 523, 801, 2096, 2578, 2885, 3611
XceI RCATGY 7 cut(s) 139, 224, 263, 276, 1800, 2288, 3268
XmaJI CCTAGG 1 cut(s) 3412
XmiI GTMKAC 3 cut(s) 225, 1919, 3269
XmnI GAANNNNTTC 3 cut(s) 438, 1138, 3337
Zsp2I ATGCAT 2 cut(s) 197, 3242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.