Rmu_sc0004234.1_g000013

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004234.1
OG0000179
Physical Location & Seq
Reverse (-)
28835 .. 30645
1811 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004234.1_g000013.1.cds

Sequence Viewer

Length: 1392 bp
atgaacgtcctgagctcttggattccttcacctttgctcgtggtaaggtccactaaaagcggcactcgtgattgcgcttctcatccttttgtggccatggctttcttcaagtgcttcaagaacgggacatttaccatcctcgaggatccagaggacactcaaagtgatgacactactctgcaggtgtacccatcattgactgggcctcaagcaattgatgtccctccttatgacccttcagttcacatcctccagtggactcatgtggcacctcgccaactagctaaacagagatctggtcatgacaaacaaagctcaaacgtgttgccgttgaagtcttcgcatcatgatcagaacaaccctcaagtcccatccattcttctcaacgatcgtatatgcaacgctatgattgtgttgcacctgtcctacgggctttctgtgagtattggtgtcctacaacgaataccctccacacttctagtggggaaatgtccatctccatctgggatttggaccaacttagaggtttggccattgccgaatgattttatgatgcgaggagctttgcgctataagaggcctcctaagaaaagcaacaggaacaaaagagatctaccccggaatgcgtttaatccatctggcaagatccatgagttccgacaacaaactcttgcagaccttgcagtatttgatgacttaggcatggagggtgaagatatagagccctcctatttggttgcctttcttgcttgttggttgtgcctgtttgttttacctagagacaccatcagtttgattcgttgtggagtattcaaagttgctagcaaaatggcacagggtctaaaattttgcctagcagtacgggtgttggctagcctttatcagggtttgaacgagatctctgtttccagtgattcaagtaattgttcagctgctcttccttttcattatatatacgtatggctggcagagtacttcagcacccactttcaatctccacttcccaaccacctaaggccctatatggttcgcttcttcggagaattttcagctaagcattttggggactcacaggctctttctttgttcaatgcatgtgacaatgtgaggatggatgcatttgccagggcattttcggagagcatagtgattatcaacctcaataacatctcccatttagacttcatatatatcatcagcattcgatccgggtatctttctctcagacaggataaccgactagtcattcagccatacagtccacatcggtttagtcaacagtttggttatatccaagacattcctggcagccttaagaatgacatttgcactggcgtattggctctaacttataaacattgggattcttgcaccagaatgaaaaccaagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

463

Amino Acids

52.23

Weight (kDa)

8.83

Isoelectric Point (pI)

52.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1353
AarI CACCTGC 1 cut(s) 172
AbsI CCTCGAGG 1 cut(s) 140
Acc36I ACCTGC 1 cut(s) 172
AccB1I GGYRCC 1 cut(s) 268
AciI CCGC 1 cut(s) 60
AclWI GGATC 4 cut(s) 140, 153, 640, 1200
AcoI YGGCCR 2 cut(s) 93, 530
AcsI RAATTY 2 cut(s) 845, 1043
AcuI CTGAAG 2 cut(s) 222, 961
AfaI GTAC 3 cut(s) 188, 861, 974
AfiI CCNNNNNNNGG 1 cut(s) 883
AflII CTTAAG 1 cut(s) 1313
AflIII ACRYGT 1 cut(s) 321
AgsI TTSAA 8 cut(s) 109, 118, 334, 814, 892, 918, 992, 1090
AhlI ACTAGT 1 cut(s) 1240
AjnI CCWGG 2 cut(s) 1124, 1303
AluBI AGCT 6 cut(s) 15, 284, 315, 563, 932, 1052
AluI AGCT 6 cut(s) 15, 284, 315, 563, 932, 1052
Alw21I GWGCWC 1 cut(s) 17
Alw26I GTCTC 1 cut(s) 774
AlwI GGATC 4 cut(s) 140, 153, 640, 1200
Ama87I CYCGRG 1 cut(s) 140
AoxI GGCC 5 cut(s) 93, 203, 530, 578, 1016
ApeKI GCWGC 2 cut(s) 932, 1308
ApoI RAATTY 2 cut(s) 845, 1043
AspLEI GCGC 2 cut(s) 77, 570
AspS9I GGNCC 4 cut(s) 48, 203, 513, 1017
AsuC2I CCSGG 2 cut(s) 619, 1210
AsuHPI GGTGA 2 cut(s) 21, 722
AsuNHI GCTAGC 2 cut(s) 821, 872
AvaI CYCGRG 1 cut(s) 140
AvaII GGWCC 2 cut(s) 48, 513
AxyI CCTNAGG 1 cut(s) 1013
BalI TGGCCA 2 cut(s) 95, 532
BamHI GGATCC 1 cut(s) 145
BanI GGYRCC 1 cut(s) 268
BanII GRGCYC 2 cut(s) 17, 726
BauI CACGAG 2 cut(s) 38, 66
BbsI GAAGAC 1 cut(s) 330
Bbv12I GWGCWC 1 cut(s) 17
BbvI GCAGC 2 cut(s) 919, 1320
BccI CCATC 8 cut(s) 143, 199, 379, 502, 508, 643, 794, 1105
BceAI ACGGC 1 cut(s) 313
BciT130I CCWGG 2 cut(s) 1126, 1305
BclI TGATCA 1 cut(s) 349
BcnI CCSGG 2 cut(s) 619, 1210
BcoDI GTCTC 1 cut(s) 774
BcuI ACTAGT 1 cut(s) 1240
BfaI CTAG 7 cut(s) 281, 479, 777, 822, 854, 873, 1241
BfmI CTRYAG 1 cut(s) 179
BfrI CTTAAG 1 cut(s) 1313
BfuAI ACCTGC 1 cut(s) 172
BglII AGATCT 3 cut(s) 293, 610, 897
BisI GCNGC 3 cut(s) 61, 933, 1309
BlpI GCTNAGC 1 cut(s) 1053
BlsI GCNGC 3 cut(s) 62, 934, 1310
BmcAI AGTACT 1 cut(s) 974
Bme1390I CCNGG 4 cut(s) 619, 1126, 1210, 1305
Bme18I GGWCC 2 cut(s) 48, 513
BmeT110I CYCGRG 1 cut(s) 140
BmgT120I GGNCC 4 cut(s) 48, 203, 513, 1017
BmiI GGNNCC 2 cut(s) 147, 270
BmrFI CCNGG 4 cut(s) 619, 1126, 1210, 1305
BmrI ACTGGG 1 cut(s) 210
BmsI GCATC 3 cut(s) 352, 543, 1105
BmtI GCTAGC 2 cut(s) 825, 876
BmuI ACTGGG 1 cut(s) 210
BpiI GAAGAC 1 cut(s) 330
BpmI CTGGAG 1 cut(s) 236
Bpu10I CCTNAGC 1 cut(s) 11
Bpu1102I GCTNAGC 1 cut(s) 1053
BpuEI CTTGAG 2 cut(s) 192, 348
BpuMI CCSGG 2 cut(s) 619, 1210
BsaAI YACGTR 1 cut(s) 958
BsaJI CCNNGG 3 cut(s) 96, 617, 1125
Bsc4I CCNNNNNNNGG 1 cut(s) 883
Bse1I ACTGG 4 cut(s) 205, 253, 909, 1336
Bse21I CCTNAGG 1 cut(s) 1013
Bse3DI GCAATG 1 cut(s) 533
BseBI CCWGG 2 cut(s) 1126, 1305
BseDI CCNNGG 3 cut(s) 96, 617, 1125
BseGI GGATG 6 cut(s) 82, 135, 246, 371, 1116, 1120
BseLI CCNNNNNNNGG 1 cut(s) 883
BseMI GCAATG 1 cut(s) 533
BseMII CTCAG 1 cut(s) 1237
BseNI ACTGG 4 cut(s) 205, 253, 909, 1336
BseRI GAGGAG 1 cut(s) 573
BseXI GCAGC 2 cut(s) 919, 1320
Bsh1285I CGRYCG 1 cut(s) 391
BshFI GGCC 5 cut(s) 95, 205, 532, 580, 1018
BshNI GGYRCC 1 cut(s) 268
BsiEI CGRYCG 1 cut(s) 391
BsiHKAI GWGCWC 1 cut(s) 17
BsiHKCI CYCGRG 1 cut(s) 140
BsiSI CCGG 2 cut(s) 619, 1209
BslFI GGGAC 4 cut(s) 139, 206, 353, 1079
BslI CCNNNNNNNGG 1 cut(s) 883
BsmAI GTCTC 1 cut(s) 774
BsmFI GGGAC 4 cut(s) 139, 206, 353, 1079
BsmI GAATGC 2 cut(s) 628, 1200
BsnI GGCC 5 cut(s) 95, 205, 532, 580, 1018
BsoBI CYCGRG 1 cut(s) 140
Bsp1286I GDGCHC 2 cut(s) 17, 726
Bsp143I GATC 8 cut(s) 145, 293, 349, 388, 610, 645, 897, 1205
Bsp1720I GCTNAGC 1 cut(s) 1053
Bsp19I CCATGG 1 cut(s) 96
BspACI CCGC 1 cut(s) 60
BspANI GGCC 5 cut(s) 95, 205, 532, 580, 1018
BspCNI CTCAG 1 cut(s) 1236
BspHI TCATGA 2 cut(s) 301, 346
BspLI GGNNCC 2 cut(s) 147, 270
BspMAI CTGCAG 1 cut(s) 183
BspMI ACCTGC 1 cut(s) 172
BspOI GCTAGC 2 cut(s) 825, 876
BspPI GGATC 4 cut(s) 140, 153, 640, 1200
BspQI GCTCTTC 1 cut(s) 942
BspT107I GGYRCC 1 cut(s) 268
BspTI CTTAAG 1 cut(s) 1313
BsrDI GCAATG 1 cut(s) 533
BsrI ACTGG 4 cut(s) 205, 253, 909, 1336
BssECI CCNNGG 3 cut(s) 96, 617, 1125
BssMI GATC 8 cut(s) 145, 293, 349, 388, 610, 645, 897, 1205
BssSI CACGAG 2 cut(s) 38, 66
BssT1I CCWWGG 1 cut(s) 96
Bst2BI CACGAG 2 cut(s) 38, 66
Bst2UI CCWGG 2 cut(s) 1126, 1305
Bst4CI ACNGT 2 cut(s) 1259, 1281
Bst6I CTCTTC 1 cut(s) 942
BstAFI CTTAAG 1 cut(s) 1313
BstAPI GCANNNNNTGC 1 cut(s) 680
BstBAI YACGTR 1 cut(s) 958
BstC8I GCNNGC 3 cut(s) 823, 874, 966
BstDEI CTNAG 7 cut(s) 11, 520, 585, 697, 1013, 1053, 1223
BstDSI CCRYGG 1 cut(s) 96
BstENI CCTNNNNNAGG 1 cut(s) 881
BstF5I GGATG 6 cut(s) 82, 135, 246, 371, 1116, 1120
BstHHI GCGC 2 cut(s) 77, 570
BstKTI GATC 8 cut(s) 148, 296, 352, 391, 613, 648, 900, 1208
BstMAI GTCTC 1 cut(s) 774
BstMBI GATC 8 cut(s) 145, 293, 349, 388, 610, 645, 897, 1205
BstMCI CGRYCG 1 cut(s) 391
BstMWI GCNNNNNNNGC 2 cut(s) 680, 746
BstNI CCWGG 2 cut(s) 1126, 1305
BstNSI RCATGY 1 cut(s) 1098
BstSCI CCNGG 4 cut(s) 617, 1124, 1208, 1303
BstSFI CTRYAG 1 cut(s) 179
BstSNI TACGTA 1 cut(s) 958
BstV1I GCAGC 2 cut(s) 919, 1320
BstV2I GAAGAC 1 cut(s) 330
BstX2I RGATCY 5 cut(s) 145, 293, 610, 645, 897
BstYI RGATCY 5 cut(s) 145, 293, 610, 645, 897
Bsu36I CCTNAGG 1 cut(s) 1013
BsuRI GGCC 5 cut(s) 95, 205, 532, 580, 1018
BtgI CCRYGG 1 cut(s) 96
BtsCI GGATG 6 cut(s) 82, 135, 246, 371, 1116, 1120
BtsIMutI CAGTG 3 cut(s) 260, 916, 1329
BveI ACCTGC 1 cut(s) 172
Cac8I GCNNGC 3 cut(s) 823, 874, 966
CciI TCATGA 2 cut(s) 301, 346
CfoI GCGC 2 cut(s) 77, 570
Cfr13I GGNCC 4 cut(s) 48, 203, 513, 1017
Csp6I GTAC 3 cut(s) 187, 860, 973
CviAII CATG 7 cut(s) 97, 263, 302, 347, 650, 703, 1095
CviQI GTAC 3 cut(s) 187, 860, 973
DdeI CTNAG 7 cut(s) 11, 520, 585, 697, 1013, 1053, 1223
DpnI GATC 8 cut(s) 147, 295, 351, 390, 612, 647, 899, 1207
DpnII GATC 8 cut(s) 145, 293, 349, 388, 610, 645, 897, 1205
EaeI YGGCCR 2 cut(s) 93, 530
Eam1104I CTCTTC 1 cut(s) 942
EarI CTCTTC 1 cut(s) 942
Ecl136II GAGCTC 1 cut(s) 15
Eco105I TACGTA 1 cut(s) 958
Eco130I CCWWGG 1 cut(s) 96
Eco147I AGGCCT 1 cut(s) 580
Eco24I GRGCYC 2 cut(s) 17, 726
Eco47I GGWCC 2 cut(s) 48, 513
Eco53kI GAGCTC 1 cut(s) 15
Eco57I CTGAAG 2 cut(s) 222, 961
Eco81I CCTNAGG 1 cut(s) 1013
Eco88I CYCGRG 1 cut(s) 140
EcoICRI GAGCTC 1 cut(s) 15
EcoNI CCTNNNNNAGG 1 cut(s) 881
EcoO109I RGGNCCY 1 cut(s) 1017
EcoRII CCWGG 2 cut(s) 1124, 1303
EcoT14I CCWWGG 1 cut(s) 96
EcoT22I ATGCAT 2 cut(s) 1096, 1120
EcoT38I GRGCYC 2 cut(s) 17, 726
ErhI CCWWGG 1 cut(s) 96
FaeI CATG 7 cut(s) 100, 266, 305, 350, 653, 706, 1098
FaqI GGGAC 4 cut(s) 139, 206, 353, 1079
FatI CATG 7 cut(s) 96, 262, 301, 346, 649, 702, 1094
FbaI TGATCA 1 cut(s) 349
Fnu4HI GCNGC 3 cut(s) 61, 933, 1309
FokI GGATG 6 cut(s) 69, 122, 233, 358, 1123, 1127
FriOI GRGCYC 2 cut(s) 17, 726
Fsp4HI GCNGC 3 cut(s) 61, 933, 1309
FspBI CTAG 7 cut(s) 281, 479, 777, 822, 854, 873, 1241
GlaI GCGC 2 cut(s) 76, 569
GluI GCNGC 3 cut(s) 61, 933, 1309
GsuI CTGGAG 1 cut(s) 236
HaeIII GGCC 5 cut(s) 95, 205, 532, 580, 1018
HapII CCGG 2 cut(s) 619, 1209
HhaI GCGC 2 cut(s) 77, 570
Hin1II CATG 7 cut(s) 100, 266, 305, 350, 653, 706, 1098
Hin6I GCGC 2 cut(s) 75, 568
HinP1I GCGC 2 cut(s) 75, 568
HincII GTYRAC 1 cut(s) 1277
HindII GTYRAC 1 cut(s) 1277
HinfI GANTC 6 cut(s) 22, 259, 796, 914, 1067, 1364
HpaII CCGG 2 cut(s) 619, 1209
HphI GGTGA 2 cut(s) 21, 722
Hpy166II GTNNAC 6 cut(s) 51, 187, 244, 258, 1262, 1277
Hpy188I TCNGA 5 cut(s) 354, 659, 1040, 1138, 1226
Hpy188III TCNNGA 6 cut(s) 10, 68, 118, 149, 302, 347
Hpy8I GTNNAC 6 cut(s) 51, 187, 244, 258, 1262, 1277
HpyAV CCTTC 2 cut(s) 36, 246
HpyCH4III ACNGT 2 cut(s) 1259, 1281
HpyCH4IV ACGT 3 cut(s) 6, 321, 957
HpyCH4V TGCA 9 cut(s) 181, 399, 418, 674, 683, 1094, 1118, 1329, 1371
HpyF10VI GCNNNNNNNGC 2 cut(s) 680, 746
HpyF3I CTNAG 7 cut(s) 11, 520, 585, 697, 1013, 1053, 1223
HpySE526I ACGT 3 cut(s) 6, 321, 957
Hsp92II CATG 7 cut(s) 100, 266, 305, 350, 653, 706, 1098
HspAI GCGC 2 cut(s) 75, 568
Ksp22I TGATCA 1 cut(s) 349
Kzo9I GATC 8 cut(s) 145, 293, 349, 388, 610, 645, 897, 1205
LguI GCTCTTC 1 cut(s) 942
LmnI GCTCC 1 cut(s) 560
Lsp1109I GCAGC 2 cut(s) 919, 1320
LweI GCATC 3 cut(s) 352, 543, 1105
MaeI CTAG 7 cut(s) 281, 479, 777, 822, 854, 873, 1241
MaeII ACGT 3 cut(s) 6, 321, 957
MaeIII GTNAC 1 cut(s) 1097
MalI GATC 8 cut(s) 147, 295, 351, 390, 612, 647, 899, 1207
MboI GATC 8 cut(s) 145, 293, 349, 388, 610, 645, 897, 1205
MboII GAAGA 6 cut(s) 97, 330, 371, 725, 929, 1027
MfeI CAATTG 1 cut(s) 213
MflI RGATCY 5 cut(s) 145, 293, 610, 645, 897
MhlI GDGCHC 2 cut(s) 17, 726
MlsI TGGCCA 2 cut(s) 95, 532
MluCI AATT 4 cut(s) 213, 845, 922, 1043
MluNI TGGCCA 2 cut(s) 95, 532
MlyI GAGTC 2 cut(s) 253, 1061
MmeI TCCRAC 1 cut(s) 682
Mox20I TGGCCA 2 cut(s) 95, 532
Mph1103I ATGCAT 2 cut(s) 1096, 1120
MscI TGGCCA 2 cut(s) 95, 532
MseI TTAA 2 cut(s) 630, 1314
MslI CAYNNNNRTG 1 cut(s) 1376
Msp20I TGGCCA 2 cut(s) 95, 532
MspA1I CMGCKG 1 cut(s) 932
MspCI CTTAAG 1 cut(s) 1313
MspI CCGG 2 cut(s) 619, 1209
MspR9I CCNGG 4 cut(s) 619, 1126, 1210, 1305
MunI CAATTG 1 cut(s) 213
Mva1269I GAATGC 2 cut(s) 628, 1200
MvaI CCWGG 2 cut(s) 1126, 1305
MwoI GCNNNNNNNGC 2 cut(s) 680, 746
NciI CCSGG 2 cut(s) 619, 1210
NcoI CCATGG 1 cut(s) 96
NdeII GATC 8 cut(s) 145, 293, 349, 388, 610, 645, 897, 1205
NheI GCTAGC 2 cut(s) 821, 872
NlaIII CATG 7 cut(s) 100, 266, 305, 350, 653, 706, 1098
NlaIV GGNNCC 2 cut(s) 147, 270
NmuCI GTSAC 1 cut(s) 1097
NsiI ATGCAT 2 cut(s) 1096, 1120
NspI RCATGY 1 cut(s) 1098
PaeR7I CTCGAG 1 cut(s) 140
PagI TCATGA 2 cut(s) 301, 346
PaqCI CACCTGC 1 cut(s) 172
PceI AGGCCT 1 cut(s) 580
PciSI GCTCTTC 1 cut(s) 942
PctI GAATGC 2 cut(s) 628, 1200
PfeI GAWTC 4 cut(s) 22, 796, 914, 1364
PkrI GCNGC 3 cut(s) 62, 934, 1310
Ple19I CGATCG 1 cut(s) 391
PleI GAGTC 2 cut(s) 253, 1061
PpsI GAGTC 2 cut(s) 253, 1061
Ppu21I YACGTR 1 cut(s) 958
PsiI TTATAA 1 cut(s) 1353
Psp124BI GAGCTC 1 cut(s) 17
Psp6I CCWGG 2 cut(s) 1124, 1303
PspGI CCWGG 2 cut(s) 1124, 1303
PspN4I GGNNCC 2 cut(s) 147, 270
PspPI GGNCC 4 cut(s) 48, 203, 513, 1017
PspXI VCTCGAGB 1 cut(s) 140
PstI CTGCAG 1 cut(s) 183
PsuI RGATCY 5 cut(s) 145, 293, 610, 645, 897
PvuI CGATCG 1 cut(s) 391
PvuII CAGCTG 1 cut(s) 932
RsaI GTAC 3 cut(s) 188, 861, 974
RsaNI GTAC 3 cut(s) 187, 860, 973
RseI CAYNNNNRTG 1 cut(s) 1376
SacI GAGCTC 1 cut(s) 17
SapI GCTCTTC 1 cut(s) 942
SaqAI TTAA 2 cut(s) 630, 1314
SatI GCNGC 3 cut(s) 61, 933, 1309
Sau3AI GATC 8 cut(s) 145, 293, 349, 388, 610, 645, 897, 1205
Sau96I GGNCC 4 cut(s) 48, 203, 513, 1017
ScaI AGTACT 1 cut(s) 974
SchI GAGTC 2 cut(s) 253, 1061
ScrFI CCNGG 4 cut(s) 619, 1126, 1210, 1305
SduI GDGCHC 2 cut(s) 17, 726
SfaNI GCATC 3 cut(s) 352, 543, 1105
SfcI CTRYAG 1 cut(s) 179
Sfr274I CTCGAG 1 cut(s) 140
SinI GGWCC 2 cut(s) 48, 513
SlaI CTCGAG 1 cut(s) 140
SmiMI CAYNNNNRTG 1 cut(s) 1376
SmlI CTYRAG 4 cut(s) 140, 207, 363, 1313
SmoI CTYRAG 4 cut(s) 140, 207, 363, 1313
SnaBI TACGTA 1 cut(s) 958
SpeI ACTAGT 1 cut(s) 1240
Sse9I AATT 4 cut(s) 213, 845, 922, 1043
SseBI AGGCCT 1 cut(s) 580
SsiI CCGC 1 cut(s) 60
SspMI CTAG 7 cut(s) 281, 479, 777, 822, 854, 873, 1241
SstI GAGCTC 1 cut(s) 17
StuI AGGCCT 1 cut(s) 580
StyD4I CCNGG 4 cut(s) 617, 1124, 1208, 1303
StyI CCWWGG 1 cut(s) 96
TaaI ACNGT 2 cut(s) 1259, 1281
TaiI ACGT 3 cut(s) 9, 324, 960
TaqI TCGA 2 cut(s) 141, 1204
TasI AATT 4 cut(s) 213, 845, 922, 1043
TatI WGTACW 1 cut(s) 972
TauI GCSGC 1 cut(s) 63
TfiI GAWTC 4 cut(s) 22, 796, 914, 1364
Tru1I TTAA 2 cut(s) 630, 1314
Tru9I TTAA 2 cut(s) 630, 1314
TscAI CASTG 3 cut(s) 260, 916, 1336
TseFI GTSAC 1 cut(s) 1097
TseI GCWGC 2 cut(s) 932, 1308
Tsp45I GTSAC 1 cut(s) 1097
TspDTI ATGAA 3 cut(s) 17, 935, 1174
TspRI CASTG 3 cut(s) 260, 916, 1336
Vha464I CTTAAG 1 cut(s) 1313
VpaK11BI GGWCC 2 cut(s) 48, 513
XagI CCTNNNNNAGG 1 cut(s) 881
XapI RAATTY 2 cut(s) 845, 1043
XceI RCATGY 1 cut(s) 1098
XcmI CCANNNNNNNNNTGG 3 cut(s) 478, 507, 1301
XhoI CTCGAG 1 cut(s) 140
XspI CTAG 7 cut(s) 281, 479, 777, 822, 854, 873, 1241
ZrmI AGTACT 1 cut(s) 974
Zsp2I ATGCAT 2 cut(s) 1096, 1120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.