FvH4_4g22273

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000179
Physical Location & Seq
Reverse (-)
25178967 .. 25181269
2303 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g22273.t1

Sequence Viewer

Length: 1290 bp
ATGGCGTTTTTCAAGAGTTTCAAGAAGGGCACAATCACCATTCTTGAAGATATCGACGGCGTCCAAAGCGATGGCACCACCTTGAGCACCTATCCGTCCTTGGCCGGCCCACTCGCCGTCGAGACATCCGGGTACGACGATTCAAGTCACATTCCCCAGTGGACTCACAAAGTGTCTCGTCAGCTAGCCACTTTTAAGCCAACCAAGTCCATCAACGAGAAGCGAAGCTTTGACGTATGGATGTTGAAGTCTGTCCATCATGATCAGACTATTCCTCAGACGCCCTTCGTGCTTCTTAATGATCGCATGTCCAACAGTTCAGTGAAGTGGAACGGATTTCGTACCAACGGTGGTTTCTCCTACACCGAATTCTACTGGGAGTGGTTAGAAGATGTCTTGAGTCGAAATGAAGAGCTCATCCACGAAGCCGGCCTCTACCGTGCACTATTTGCTTCTCTCTTCTCCTATGATCGTGTTGCGCTTGTTGTTAAGGCTTTCTGCGAACATTGGTGCCCTCTTACGAACACCCTTCATACATCTCATGGCGAAATGTCTATCTCTTTGCGAGATTTGGTGATTATTGGAGGTCTACCTGTCGTTGGAGAGTTTTATGACGAAGTTGTTCCACCTATTGAAGAATTTTCCACCGAGTGCGAGGAAAGCAAGCCGCTCATCCCCAAGAGTTGTGAGTACCTTTTCCTAGCTTACCACAAACTTTGCAAAGGCAATCGAGGTCAAAAAGTGAAGATCACCTCATGGATTCGGTATTGGTACAAAGGAAGCATGAAATATAAGAGACCACCTGCCAAGAGTACCCGAAACAAGAAAGACGCACCCCCAAGCACCCACAATCCAACTGGTGAAATCCCTGAAGCTCAAGACGGCGCTGAGAATGACCTCTGGCCATTTGTTGATGTATACCACTTGACATCAAAGAAGCCTGCAACGGTGACACCTGTTGGTGGGTCGCCACCCAAACTTTTGAAACTTAAGGAAGATAAGATCGTTACCCGTAATGGTGACTCGTTTGACCCTCATGTTGGTGGAAGTCGTCTTAAGCTGAAGCTGAAAGGAATTGAGGCCCCAGCAAAGAGGTCTAGTGAGAGTAGCAGTTCCGGGAATGTAAACTTTAAGCGTCGAAGAATTGAACCTGACCTTGGCTCCACTTTTTTTGATCCCGACAATGAGTTTCCCCTCAACACTGACTTTCTTGGTGACGTTCCCGGTTCTCCTCAGTCCACATCGCGACATGTTCAAACAAAGTCTCTGACAAGTGAACGTGTCAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

430

Amino Acids

48.34

Weight (kDa)

8.38

Isoelectric Point (pI)

51.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 144 - 212 3.6e-10 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 811
Acc36I ACCTGC 1 cut(s) 811
AccB1I GGYRCC 2 cut(s) 74, 510
AccBSI CCGCTC 1 cut(s) 670
AccI GTMKAC 2 cut(s) 589, 918
AccII CGCG 1 cut(s) 1246
AciI CCGC 1 cut(s) 668
AclWI GGATC 1 cut(s) 1169
AcoI YGGCCR 2 cut(s) 102, 902
AcsI RAATTY 2 cut(s) 368, 638
AcuI CTGAAG 2 cut(s) 891, 1082
AcyI GRCGYC 2 cut(s) 60, 281
AdeI CACNNNGTG 2 cut(s) 172, 651
AfaI GTAC 5 cut(s) 134, 343, 692, 773, 814
AfiI CCNNNNNNNGG 4 cut(s) 599, 962, 1040, 1157
AflII CTTAAG 2 cut(s) 989, 1055
AflIII ACRYGT 2 cut(s) 1249, 1279
AgsI TTSAA 9 cut(s) 13, 22, 47, 144, 247, 635, 985, 1148, 1256
AjuI GAANNNNNNNTTGG 4 cut(s) 338, 370, 1140, 1172
AluBI AGCT 7 cut(s) 184, 228, 415, 704, 875, 1060, 1066
AluI AGCT 7 cut(s) 184, 228, 415, 704, 875, 1060, 1066
Alw21I GWGCWC 3 cut(s) 89, 417, 445
Alw26I GTCTC 4 cut(s) 116, 180, 790, 1269
Alw44I GTGCAC 1 cut(s) 441
AlwI GGATC 1 cut(s) 1169
AoxI GGCC 5 cut(s) 102, 106, 430, 902, 1080
ApaLI GTGCAC 1 cut(s) 441
ApoI RAATTY 2 cut(s) 368, 638
Asp700I GAANNNNTTC 1 cut(s) 621
AspLEI GCGC 2 cut(s) 481, 887
AspS9I GGNCC 2 cut(s) 107, 1081
AsuC2I CCSGG 3 cut(s) 130, 1117, 1224
AsuHPI GGTGA 7 cut(s) 28, 586, 742, 872, 961, 1031, 1226
AsuNHI GCTAGC 1 cut(s) 184
BaeGI GKGCMC 3 cut(s) 32, 445, 515
BalI TGGCCA 1 cut(s) 904
BanI GGYRCC 2 cut(s) 74, 510
BanII GRGCYC 1 cut(s) 417
Bbv12I GWGCWC 3 cut(s) 89, 417, 445
BccI CCATC 3 cut(s) 65, 218, 264
BceAI ACGGC 3 cut(s) 73, 101, 898
BclI TGATCA 1 cut(s) 262
BcnI CCSGG 3 cut(s) 130, 1117, 1224
BcoDI GTCTC 4 cut(s) 116, 180, 790, 1269
BfaI CTAG 3 cut(s) 185, 701, 1098
BfoI RGCGCY 1 cut(s) 888
BfrI CTTAAG 2 cut(s) 989, 1055
BfuAI ACCTGC 1 cut(s) 811
BisI GCNGC 1 cut(s) 668
BlsI GCNGC 1 cut(s) 669
Bme1390I CCNGG 3 cut(s) 130, 1117, 1224
BmgT120I GGNCC 2 cut(s) 107, 1081
BmiI GGNNCC 4 cut(s) 76, 512, 1083, 1162
BmrFI CCNGG 3 cut(s) 130, 1117, 1224
BmrI ACTGGG 2 cut(s) 151, 385
BmtI GCTAGC 1 cut(s) 188
BmuI ACTGGG 2 cut(s) 151, 385
BpuEI CTTGAG 3 cut(s) 103, 418, 861
BpuMI CCSGG 3 cut(s) 130, 1117, 1224
BsaHI GRCGYC 2 cut(s) 60, 281
BsaI GGTCTC 1 cut(s) 790
BsaJI CCNNGG 2 cut(s) 99, 1156
BsaXI ACNNNNNCTCC 2 cut(s) 1145, 1175
Bsc4I CCNNNNNNNGG 4 cut(s) 599, 962, 1040, 1157
Bse118I RCCGGY 2 cut(s) 104, 428
Bse1I ACTGG 3 cut(s) 157, 380, 862
BseDI CCNNGG 2 cut(s) 99, 1156
BseGI GGATG 4 cut(s) 125, 246, 417, 672
BseLI CCNNNNNNNGG 4 cut(s) 599, 962, 1040, 1157
BseMII CTCAG 3 cut(s) 290, 879, 1247
BseNI ACTGG 3 cut(s) 157, 380, 862
BseRI GAGGAG 1 cut(s) 1221
BseSI GKGCMC 3 cut(s) 32, 445, 515
BseYI CCCAGC 1 cut(s) 1084
Bsh1236I CGCG 1 cut(s) 1246
BshFI GGCC 5 cut(s) 104, 108, 432, 904, 1082
BshNI GGYRCC 2 cut(s) 74, 510
BsiHKAI GWGCWC 3 cut(s) 89, 417, 445
BsiSI CCGG 5 cut(s) 105, 129, 429, 1116, 1224
BslI CCNNNNNNNGG 4 cut(s) 599, 962, 1040, 1157
BsmAI GTCTC 4 cut(s) 116, 180, 790, 1269
BsnI GGCC 5 cut(s) 104, 108, 432, 904, 1082
Bso31I GGTCTC 1 cut(s) 790
Bsp1286I GDGCHC 5 cut(s) 32, 89, 417, 445, 515
Bsp143I GATC 6 cut(s) 262, 301, 469, 747, 1002, 1174
Bsp68I TCGCGA 1 cut(s) 1246
BspACI CCGC 1 cut(s) 668
BspANI GGCC 5 cut(s) 104, 108, 432, 904, 1082
BspCNI CTCAG 3 cut(s) 289, 880, 1246
BspFNI CGCG 1 cut(s) 1246
BspHI TCATGA 1 cut(s) 259
BspLI GGNNCC 4 cut(s) 76, 512, 1083, 1162
BspMI ACCTGC 1 cut(s) 811
BspOI GCTAGC 1 cut(s) 188
BspPI GGATC 1 cut(s) 1169
BspQI GCTCTTC 1 cut(s) 405
BspT107I GGYRCC 2 cut(s) 74, 510
BspTI CTTAAG 2 cut(s) 989, 1055
BspTNI GGTCTC 1 cut(s) 790
BsrBI CCGCTC 1 cut(s) 670
BsrFI RCCGGY 2 cut(s) 104, 428
BsrI ACTGG 3 cut(s) 157, 380, 862
BssAI RCCGGY 2 cut(s) 104, 428
BssECI CCNNGG 2 cut(s) 99, 1156
BssMI GATC 6 cut(s) 262, 301, 469, 747, 1002, 1174
BssNAI GTATAC 1 cut(s) 919
BssNI GRCGYC 2 cut(s) 60, 281
BssT1I CCWWGG 2 cut(s) 99, 1156
Bst1107I GTATAC 1 cut(s) 919
Bst4CI ACNGT 4 cut(s) 317, 350, 440, 949
Bst6I CTCTTC 2 cut(s) 405, 464
BstACI GRCGYC 2 cut(s) 60, 281
BstAFI CTTAAG 2 cut(s) 989, 1055
BstAPI GCANNNNNTGC 1 cut(s) 449
BstC8I GCNNGC 5 cut(s) 106, 186, 430, 665, 942
BstDEI CTNAG 3 cut(s) 276, 888, 1233
BstF5I GGATG 4 cut(s) 125, 246, 417, 672
BstFNI CGCG 1 cut(s) 1246
BstH2I RGCGCY 1 cut(s) 888
BstHHI GCGC 2 cut(s) 481, 887
BstKTI GATC 6 cut(s) 265, 304, 472, 750, 1005, 1177
BstMAI GTCTC 4 cut(s) 116, 180, 790, 1269
BstMBI GATC 6 cut(s) 262, 301, 469, 747, 1002, 1174
BstMWI GCNNNNNNNGC 4 cut(s) 66, 289, 449, 660
BstNSI RCATGY 2 cut(s) 310, 1253
BstSCI CCNGG 3 cut(s) 128, 1115, 1222
BstSLI GKGCMC 3 cut(s) 32, 445, 515
BstUI CGCG 1 cut(s) 1246
BstXI CCANNNNNNTGG 1 cut(s) 71
BstZ17I GTATAC 1 cut(s) 919
BsuRI GGCC 5 cut(s) 104, 108, 432, 904, 1082
BtgZI GCGATG 2 cut(s) 84, 1227
BtsCI GGATG 4 cut(s) 125, 246, 417, 672
BtsIMutI CAGTG 3 cut(s) 164, 327, 1200
BtuMI TCGCGA 1 cut(s) 1246
BveI ACCTGC 1 cut(s) 811
Cac8I GCNNGC 5 cut(s) 106, 186, 430, 665, 942
CciI TCATGA 1 cut(s) 259
CfoI GCGC 2 cut(s) 481, 887
Cfr10I RCCGGY 2 cut(s) 104, 428
Cfr13I GGNCC 2 cut(s) 107, 1081
CseI GACGC 4 cut(s) 49, 289, 839, 1124
Csp6I GTAC 5 cut(s) 133, 342, 691, 772, 813
CspCI CAANNNNNGTGG 4 cut(s) 698, 733, 1153, 1188
CviAII CATG 7 cut(s) 260, 307, 542, 756, 784, 1037, 1250
CviQI GTAC 5 cut(s) 133, 342, 691, 772, 813
DdeI CTNAG 3 cut(s) 276, 888, 1233
DpnI GATC 6 cut(s) 264, 303, 471, 749, 1004, 1176
DpnII GATC 6 cut(s) 262, 301, 469, 747, 1002, 1174
DraIII CACNNNGTG 2 cut(s) 172, 651
EaeI YGGCCR 2 cut(s) 102, 902
Eam1104I CTCTTC 2 cut(s) 405, 464
EarI CTCTTC 2 cut(s) 405, 464
Ecl136II GAGCTC 1 cut(s) 415
Eco130I CCWWGG 2 cut(s) 99, 1156
Eco24I GRGCYC 1 cut(s) 417
Eco31I GGTCTC 1 cut(s) 790
Eco32I GATATC 1 cut(s) 52
Eco53kI GAGCTC 1 cut(s) 415
Eco57I CTGAAG 2 cut(s) 891, 1082
EcoICRI GAGCTC 1 cut(s) 415
EcoO109I RGGNCCY 1 cut(s) 1081
EcoRI GAATTC 1 cut(s) 368
EcoRV GATATC 1 cut(s) 52
EcoT14I CCWWGG 2 cut(s) 99, 1156
EcoT38I GRGCYC 1 cut(s) 417
ErhI CCWWGG 2 cut(s) 99, 1156
FaeI CATG 7 cut(s) 263, 310, 545, 759, 787, 1040, 1253
FalI AAGNNNNNCTT 2 cut(s) 212, 244
FatI CATG 7 cut(s) 259, 306, 541, 755, 783, 1036, 1249
FbaI TGATCA 1 cut(s) 262
FblI GTMKAC 2 cut(s) 589, 918
Fnu4HI GCNGC 1 cut(s) 668
FokI GGATG 4 cut(s) 112, 253, 404, 659
FriOI GRGCYC 1 cut(s) 417
FseI GGCCGGCC 1 cut(s) 108
Fsp4HI GCNGC 1 cut(s) 668
FspBI CTAG 3 cut(s) 185, 701, 1098
GlaI GCGC 2 cut(s) 480, 886
GluI GCNGC 1 cut(s) 668
GsaI CCCAGC 1 cut(s) 1088
HaeII RGCGCY 1 cut(s) 888
HaeIII GGCC 5 cut(s) 104, 108, 432, 904, 1082
HapII CCGG 5 cut(s) 105, 129, 429, 1116, 1224
HgaI GACGC 4 cut(s) 49, 289, 839, 1124
HhaI GCGC 2 cut(s) 481, 887
Hin1I GRCGYC 2 cut(s) 60, 281
Hin1II CATG 7 cut(s) 263, 310, 545, 759, 787, 1040, 1253
Hin6I GCGC 2 cut(s) 479, 885
HinP1I GCGC 2 cut(s) 479, 885
HindIII AAGCTT 1 cut(s) 226
HinfI GANTC 5 cut(s) 140, 163, 400, 760, 1022
HpaII CCGG 5 cut(s) 105, 129, 429, 1116, 1224
HphI GGTGA 7 cut(s) 28, 586, 742, 872, 961, 1031, 1226
Hpy166II GTNNAC 7 cut(s) 162, 443, 590, 919, 1126, 1239, 1277
Hpy188I TCNGA 3 cut(s) 267, 279, 1269
Hpy188III TCNNGA 9 cut(s) 13, 22, 44, 121, 260, 397, 878, 1178, 1245
Hpy8I GTNNAC 7 cut(s) 162, 443, 590, 919, 1126, 1239, 1277
Hpy99I CGWCG 4 cut(s) 59, 122, 140, 1140
HpyAV CCTTC 3 cut(s) 19, 295, 539
HpyCH4III ACNGT 4 cut(s) 317, 350, 440, 949
HpyCH4IV ACGT 3 cut(s) 234, 1218, 1279
HpyCH4V TGCA 3 cut(s) 443, 720, 944
HpyF10VI GCNNNNNNNGC 4 cut(s) 66, 289, 449, 660
HpyF3I CTNAG 3 cut(s) 276, 888, 1233
HpySE526I ACGT 3 cut(s) 234, 1218, 1279
Hsp92I GRCGYC 2 cut(s) 60, 281
Hsp92II CATG 7 cut(s) 263, 310, 545, 759, 787, 1040, 1253
HspAI GCGC 2 cut(s) 479, 885
KroI GCCGGC 2 cut(s) 104, 428
KroNI GCCGGC 2 cut(s) 106, 430
Ksp22I TGATCA 1 cut(s) 262
Kzo9I GATC 6 cut(s) 262, 301, 469, 747, 1002, 1174
LguI GCTCTTC 1 cut(s) 405
LmnI GCTCC 1 cut(s) 1166
MaeI CTAG 3 cut(s) 185, 701, 1098
MaeII ACGT 3 cut(s) 234, 1218, 1279
MaeIII GTNAC 5 cut(s) 146, 949, 1006, 1019, 1214
MalI GATC 6 cut(s) 264, 303, 471, 749, 1004, 1176
MbiI CCGCTC 1 cut(s) 670
MboI GATC 6 cut(s) 262, 301, 469, 747, 1002, 1174
MboII GAAGA 8 cut(s) 59, 401, 422, 451, 647, 757, 1007, 1152
MhlI GDGCHC 5 cut(s) 32, 89, 417, 445, 515
MlsI TGGCCA 1 cut(s) 904
MluCI AATT 4 cut(s) 368, 638, 1074, 1143
MluNI TGGCCA 1 cut(s) 904
MlyI GAGTC 3 cut(s) 157, 409, 1016
MmeI TCCRAC 3 cut(s) 336, 580, 878
Mox20I TGGCCA 1 cut(s) 904
MroNI GCCGGC 2 cut(s) 104, 428
MroXI GAANNNNTTC 1 cut(s) 621
MscI TGGCCA 1 cut(s) 904
MseI TTAA 6 cut(s) 195, 297, 489, 990, 1056, 1131
MslI CAYNNNNRTG 1 cut(s) 1041
Msp20I TGGCCA 1 cut(s) 904
MspCI CTTAAG 2 cut(s) 989, 1055
MspI CCGG 5 cut(s) 105, 129, 429, 1116, 1224
MspR9I CCNGG 3 cut(s) 130, 1117, 1224
MvnI CGCG 1 cut(s) 1246
MwoI GCNNNNNNNGC 4 cut(s) 66, 289, 449, 660
NaeI GCCGGC 2 cut(s) 106, 430
NciI CCSGG 3 cut(s) 130, 1117, 1224
NdeII GATC 6 cut(s) 262, 301, 469, 747, 1002, 1174
NgoMIV GCCGGC 2 cut(s) 104, 428
NheI GCTAGC 1 cut(s) 184
NlaIII CATG 7 cut(s) 263, 310, 545, 759, 787, 1040, 1253
NlaIV GGNNCC 4 cut(s) 76, 512, 1083, 1162
NmuCI GTSAC 4 cut(s) 146, 949, 1019, 1214
NruI TCGCGA 1 cut(s) 1246
NspI RCATGY 2 cut(s) 310, 1253
PagI TCATGA 1 cut(s) 259
PaqCI CACCTGC 1 cut(s) 811
PciI ACATGT 1 cut(s) 1249
PciSI GCTCTTC 1 cut(s) 405
PdiI GCCGGC 2 cut(s) 106, 430
PdmI GAANNNNTTC 1 cut(s) 621
PfeI GAWTC 2 cut(s) 140, 760
PflFI GACNNNGTC 1 cut(s) 59
PfoI TCCNGGA 1 cut(s) 1115
PkrI GCNGC 1 cut(s) 669
PleI GAGTC 3 cut(s) 157, 408, 1016
PpsI GAGTC 3 cut(s) 157, 408, 1016
PscI ACATGT 1 cut(s) 1249
Psp124BI GAGCTC 1 cut(s) 417
PspFI CCCAGC 1 cut(s) 1084
PspN4I GGNNCC 4 cut(s) 76, 512, 1083, 1162
PspPI GGNCC 2 cut(s) 107, 1081
PsyI GACNNNGTC 1 cut(s) 59
RigI GGCCGGCC 1 cut(s) 108
RruI TCGCGA 1 cut(s) 1246
RsaI GTAC 5 cut(s) 134, 343, 692, 773, 814
RsaNI GTAC 5 cut(s) 133, 342, 691, 772, 813
RseI CAYNNNNRTG 1 cut(s) 1041
SacI GAGCTC 1 cut(s) 417
SapI GCTCTTC 1 cut(s) 405
SaqAI TTAA 6 cut(s) 195, 297, 489, 990, 1056, 1131
SatI GCNGC 1 cut(s) 668
Sau3AI GATC 6 cut(s) 262, 301, 469, 747, 1002, 1174
Sau96I GGNCC 2 cut(s) 107, 1081
SchI GAGTC 3 cut(s) 157, 409, 1016
ScrFI CCNGG 3 cut(s) 130, 1117, 1224
SduI GDGCHC 5 cut(s) 32, 89, 417, 445, 515
SmiMI CAYNNNNRTG 1 cut(s) 1041
SmlI CTYRAG 5 cut(s) 82, 397, 876, 989, 1055
SmoI CTYRAG 5 cut(s) 82, 397, 876, 989, 1055
Sse9I AATT 4 cut(s) 368, 638, 1074, 1143
SsiI CCGC 1 cut(s) 668
SspMI CTAG 3 cut(s) 185, 701, 1098
SstI GAGCTC 1 cut(s) 417
StyD4I CCNGG 3 cut(s) 128, 1115, 1222
StyI CCWWGG 2 cut(s) 99, 1156
TaaI ACNGT 4 cut(s) 317, 350, 440, 949
TaiI ACGT 3 cut(s) 237, 1221, 1282
TaqI TCGA 5 cut(s) 54, 120, 403, 730, 1138
TasI AATT 4 cut(s) 368, 638, 1074, 1143
TauI GCSGC 1 cut(s) 670
TfiI GAWTC 2 cut(s) 140, 760
Tru1I TTAA 6 cut(s) 195, 297, 489, 990, 1056, 1131
Tru9I TTAA 6 cut(s) 195, 297, 489, 990, 1056, 1131
TscAI CASTG 3 cut(s) 164, 327, 1207
TseFI GTSAC 4 cut(s) 146, 949, 1019, 1214
Tsp45I GTSAC 4 cut(s) 146, 949, 1019, 1214
TspDTI ATGAA 3 cut(s) 423, 521, 800
TspGWI ACGGA 2 cut(s) 84, 348
TspRI CASTG 3 cut(s) 164, 327, 1207
Tth111I GACNNNGTC 1 cut(s) 59
Vha464I CTTAAG 2 cut(s) 989, 1055
VneI GTGCAC 1 cut(s) 441
XapI RAATTY 2 cut(s) 368, 638
XceI RCATGY 2 cut(s) 310, 1253
XcmI CCANNNNNNNNNTGG 1 cut(s) 854
XmiI GTMKAC 2 cut(s) 589, 918
XmnI GAANNNNTTC 1 cut(s) 621
XspI CTAG 3 cut(s) 185, 701, 1098
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.