Rmu_sc0003687.1_g000020

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003687.1
OG0000179
Physical Location & Seq
Reverse (-)
67147 .. 69183
2037 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003687.1_g000020.1.cds

Sequence Viewer

Length: 1482 bp
atgttccgacaaccgagatctggaagagaccaacaaaactcacatgtactgttgctgaagtcttcgcatcatgatcagaacactcctcaagtcccattcacgcttctcaacgatcgtgtacgcaatgattcagtgaagtggagcaatgcatttcgcgcaaatggaggcttctcttacacagagttctactgtgaatgggtagaagatatcttaagcaggaatggcaagcttaccagggagactggcctctatcgagctatattcgcctcactgttcagctatgaccgtgttgcacctgtcatacgggccttctgcgagtactggtgtcccgcgacgaataccctccacacttctagcggggaaatgtccatctccctctgggatttggaccaacttggaggtttacccattgccggacgattctatgatgaggttgtcccagctgctgaagagctttctgcaatgagcaaagggagtcaacagagctgcagttatttgtttctcgcctaccataagctctgcaaagaaagccaagggcagaaggtgaaaataacttcttggatacgatattggtatagaggagctttacgatataagaggcctccaaacaaaagcaccaggaacaaaagagatccgcccccgaatgtgtttaatccatctggcaggatccatgagatccgacaaagtacttctgcagtcctcgcagtctttgaggacttaggcgtagaaggtgaagatatagagcccacctacttggccgcttttcttgcttgttggctgtgcctgtttgttttacctggagacaacaccggcttgattcatccaggagtattcaaagtcgccagcaaaatgacacagggtaattgctcggctgctcttccttttcattatatttatgcatggctagcagagtacttcggcacccactttcagtctccacttcccaacgacctaaggccccgtatggttcgcttctccggagaactttcagctaggcattttggagactcacaggctctttctttgttcgacacatgtgataatgtgaagatgggtgtatttgccagggtattttcagagagcagagtgattatcaaccgcaactctttagattctcacgtcgctttcatccgtccacttaagctgaaaagacctgtcatcaaagaaagaaggcgtattggaagcagcggtagcaatgatagtgaagtgcactttaagcgtcgaaaaactgacaccagccttggccctacttattgtgatcccaatgctgagttcactctgaatactgactttcttggtgacatctcaacttcttcgcaaccgatgctgcagcgaaatgagggtgcagagattgatggtcgttcactttggggaaacgatgacgcctctttagaccctatacgtgttccttctgcagcggaacttgaggcttacgctttacccacggaaggaaaatccaatgcaacgaatgactcacagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

493

Amino Acids

55.59

Weight (kDa)

8.24

Isoelectric Point (pI)

52.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000179)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18561 FvH4_1g29681 FvH4_2g15190 FvH4_3g22800 FvH4_3g22801 FvH4_3g26700 FvH4_4g15162 FvH4_4g15163 FvH4_4g15164 FvH4_4g22273 FvH4_7g02320 FvH4_7g03670 FvH4_7g03671
malus_domestica MD07G1097100.v1.1 MD11G1208600.v1.1 MD15G1303300.v1.1
prunus_persica Prupe.2G070800_v2.0.a1
pyrus_communis pycom02g13430 pycom04g06950 pycom04g09420 pycom04g09610 pycom06g05740 pycom07g00010 pycom07g06720 pycom07g09960 pycom07g10670 pycom07g10680 pycom07g10920 pycom07g27810 pycom08g12110 pycom08g13640 pycom09g03570 pycom09g13470 pycom09g13510 pycom10g01180 pycom10g02180 pycom10g06840 pycom12424g00130 pycom12g03090 pycom12g09570 pycom12g09580 pycom12g09590 pycom1310g00020 pycom13g25030 pycom13g25310 pycom13g25700 pycom13g26160 pycom13g27790 pycom13g28780 pycom13g28790 pycom1683g00070 pycom16g19330 pycom16g21210 pycom16g21710 pycom16g23400 pycom16g24730 pycom17g17550 pycom17g27670 pycom420g00110 pycom420g00130 pycom420g00610 pycom520g00600 pycom675g00050
rosa_chinensis RchiOBHm_Chr1g0316731
rosa_laevigata RLG00000030467
rosa_multiflora Rmu_co8112106.1_g000001 Rmu_co8301911.1_g000001 Rmu_sc0000161.1_g000042 Rmu_sc0000161.1_g000043 Rmu_sc0000173.1_g000035 Rmu_sc0000173.1_g000036 Rmu_sc0000480.1_g000024 Rmu_sc0000670.1_g000020 Rmu_sc0000670.1_g000021 Rmu_sc0000962.1_g000043 Rmu_sc0000962.1_g000044 Rmu_sc0001025.1_g000004 Rmu_sc0001075.1_g000026 Rmu_sc0001075.1_g000027 Rmu_sc0001167.1_g000050 Rmu_sc0001227.1_g000043 Rmu_sc0001346.1_g000006 Rmu_sc0001438.1_g000034 Rmu_sc0001946.1_g000002 Rmu_sc0001981.1_g000005 Rmu_sc0002106.1_g000005 Rmu_sc0002187.1_g000004 Rmu_sc0002187.1_g000005 Rmu_sc0002187.1_g000018 Rmu_sc0002539.1_g000097 Rmu_sc0003008.1_g000050 Rmu_sc0003008.1_g000051 Rmu_sc0003069.1_g000033 Rmu_sc0003069.1_g000034 Rmu_sc0003412.1_g000016 Rmu_sc0003553.1_g000005 Rmu_sc0003553.1_g000006 Rmu_sc0003641.1_g000025 Rmu_sc0003652.1_g000006 Rmu_sc0003687.1_g000019 Rmu_sc0003687.1_g000020 Rmu_sc0004234.1_g000013 Rmu_sc0004249.1_g000005 Rmu_sc0005044.1_g000027 Rmu_sc0005060.1_g000012 Rmu_sc0005816.1_g000005 Rmu_sc0006175.1_g000006 Rmu_sc0006175.1_g000007 Rmu_sc0006695.1_g000046 Rmu_sc0006725.1_g000014 Rmu_sc0006746.1_g000015 Rmu_sc0006746.1_g000016 Rmu_sc0006912.1_g000008 Rmu_sc0007355.1_g000004 Rmu_sc0007705.1_g000001 Rmu_sc0007903.1_g000003 Rmu_sc0007953.1_g000001 Rmu_sc0008630.1_g000001 Rmu_sc0008923.1_g000018 Rmu_sc0008923.1_g000019 Rmu_sc0009186.1_g000003 Rmu_sc0010184.1_g000007 Rmu_sc0010243.1_g000001 Rmu_sc0011242.1_g000004 Rmu_sc0012849.1_g000001 Rmu_sc0012849.1_g000002 Rmu_sc0012883.1_g000001 Rmu_sc0013028.1_g000015 Rmu_sc0015042.1_g000003 Rmu_sc0016730.1_g000002 Rmu_sc0017702.1_g000002 Rmu_sc0017791.1_g000007 Rmu_sc0017874.1_g000005 Rmu_sc0025334.1_g000001 Rmu_sc0025334.1_g000002 Rmu_sc0028789.1_g000001 Rmu_sc0030538.1_g000001 Rmu_sc0033137.1_g000001 Rmu_ssc0000183.1_g000013 Rmu_ssc0000259.1_g000061 Rmu_ssc0000259.1_g000062 Rmu_ssc0000259.1_g000063
rosa_roxburghii Rroxscaffold_173G00435030 Rroxscaffold_173G00435040 Rroxscaffold_1G00033030 Rroxscaffold_2G00093360 Rroxscaffold_2G00113080 Rroxscaffold_2G00146180 Rroxscaffold_3G00227920 Rroxscaffold_3G00251750 Rroxscaffold_4G00328240 Rroxscaffold_5G00333920 Rroxscaffold_5G00338240 Rroxscaffold_5G00342700 Rroxscaffold_6G00412810 Rroxscaffold_6G00423130 Rroxscaffold_7G00175190
rosa_rugosa Rorug01G0029200 Rorug01G0029300 Rorug01G0029400 Rorug01G0029400
rosa_samantha Rh1AG040900 Rh1BG038100 Rh1CG042000 Rh1DG027900
rosa_wichuraiana Rw0G019970 Rw1G003400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 920
AccII CGCG 2 cut(s) 156, 332
AccIII TCCGGA 1 cut(s) 977
AciI CCGC 7 cut(s) 330, 357, 635, 759, 1099, 1188, 1418
AclWI GGATC 5 cut(s) 626, 661, 670, 674, 1253
AcoI YGGCCR 1 cut(s) 756
AcuI CTGAAG 2 cut(s) 77, 468
AcyI GRCGYC 1 cut(s) 1383
AfaI GTAC 5 cut(s) 48, 120, 320, 688, 914
AfiI CCNNNNNNNGG 3 cut(s) 20, 413, 1448
AflII CTTAAG 2 cut(s) 211, 1139
AflIII ACRYGT 3 cut(s) 43, 1034, 1402
AgsI TTSAA 1 cut(s) 835
AjiI CACGTC 1 cut(s) 1120
AjnI CCWGG 5 cut(s) 233, 617, 796, 823, 1064
AjuI GAANNNNNNNTTGG 2 cut(s) 1256, 1288
Alw21I GWGCWC 1 cut(s) 1212
Alw26I GTCTC 5 cut(s) 21, 233, 795, 939, 999
Alw44I GTGCAC 1 cut(s) 1208
AlwI GGATC 5 cut(s) 626, 661, 670, 674, 1253
AlwNI CAGNNNCTG 1 cut(s) 446
Aor13HI TCCGGA 1 cut(s) 977
AoxI GGCC 6 cut(s) 244, 306, 599, 756, 956, 1243
ApaLI GTGCAC 1 cut(s) 1208
ApeKI GCWGC 7 cut(s) 443, 486, 872, 1185, 1327, 1330, 1415
AspLEI GCGC 1 cut(s) 158
AspS9I GGNCC 4 cut(s) 306, 388, 957, 1244
AsuHPI GGTGA 3 cut(s) 556, 743, 1310
AsuNHI GCTAGC 1 cut(s) 904
AvaII GGWCC 1 cut(s) 388
AxyI CCTNAGG 1 cut(s) 953
BaeGI GKGCMC 1 cut(s) 1212
BamHI GGATCC 1 cut(s) 666
BanI GGYRCC 1 cut(s) 920
BanII GRGCYC 1 cut(s) 747
BbsI GAAGAC 1 cut(s) 54
Bbv12I GWGCWC 1 cut(s) 1212
BbvI GCAGC 7 cut(s) 430, 473, 859, 1197, 1314, 1342, 1427
BccI CCATC 4 cut(s) 377, 664, 1045, 1349
BciT130I CCWGG 5 cut(s) 235, 619, 798, 825, 1066
BciVI GTATCC 1 cut(s) 555
BclI TGATCA 1 cut(s) 73
BcoDI GTCTC 5 cut(s) 21, 233, 795, 939, 999
BfaI CTAG 3 cut(s) 354, 905, 993
BfmI CTRYAG 4 cut(s) 487, 693, 1328, 1413
BfrI CTTAAG 2 cut(s) 211, 1139
BfuI GTATCC 1 cut(s) 555
BglII AGATCT 1 cut(s) 17
BisI GCNGC 8 cut(s) 444, 487, 759, 873, 1186, 1328, 1331, 1416
BlsI GCNGC 8 cut(s) 445, 488, 760, 874, 1187, 1329, 1332, 1417
BmcAI AGTACT 3 cut(s) 320, 688, 914
Bme1390I CCNGG 5 cut(s) 235, 619, 798, 825, 1066
Bme18I GGWCC 1 cut(s) 388
BmgBI CACGTC 1 cut(s) 1120
BmgT120I GGNCC 4 cut(s) 306, 388, 957, 1244
BmiI GGNNCC 3 cut(s) 668, 922, 959
BmrFI CCNGG 5 cut(s) 235, 619, 798, 825, 1066
BmsI GCATC 2 cut(s) 76, 1314
BmtI GCTAGC 1 cut(s) 908
BpiI GAAGAC 1 cut(s) 54
BpmI CTGGAG 1 cut(s) 819
BpuEI CTTGAG 2 cut(s) 72, 1445
BsaAI YACGTR 1 cut(s) 1403
BsaHI GRCGYC 1 cut(s) 1383
BsaI GGTCTC 1 cut(s) 21
BsaJI CCNNGG 5 cut(s) 234, 532, 1065, 1240, 1443
BsaWI WCCGGW 1 cut(s) 977
Bsc4I CCNNNNNNNGG 3 cut(s) 20, 413, 1448
Bse118I RCCGGY 1 cut(s) 809
Bse1I ACTGG 2 cut(s) 247, 326
Bse21I CCTNAGG 1 cut(s) 953
Bse3DI GCAATG 5 cut(s) 130, 151, 408, 468, 1201
BseAI TCCGGA 1 cut(s) 977
BseBI CCWGG 5 cut(s) 235, 619, 798, 825, 1066
BseDI CCNNGG 5 cut(s) 234, 532, 1065, 1240, 1443
BseGI GGATG 2 cut(s) 820, 1128
BseLI CCNNNNNNNGG 3 cut(s) 20, 413, 1448
BseMI GCAATG 5 cut(s) 130, 151, 408, 468, 1201
BseMII CTCAG 1 cut(s) 1260
BseNI ACTGG 2 cut(s) 247, 326
BseRI GAGGAG 2 cut(s) 75, 594
BseSI GKGCMC 1 cut(s) 1212
BseXI GCAGC 7 cut(s) 430, 473, 859, 1197, 1314, 1342, 1427
BseYI CCCAGC 1 cut(s) 439
BsgI GTGCAG 1 cut(s) 1365
Bsh1236I CGCG 2 cut(s) 156, 332
Bsh1285I CGRYCG 1 cut(s) 115
BshFI GGCC 6 cut(s) 246, 308, 601, 758, 958, 1245
BshNI GGYRCC 1 cut(s) 920
BsiEI CGRYCG 1 cut(s) 115
BsiHKAI GWGCWC 1 cut(s) 1212
BsiSI CCGG 3 cut(s) 414, 810, 978
BslFI GGGAC 3 cut(s) 77, 312, 422
BslI CCNNNNNNNGG 3 cut(s) 20, 413, 1448
BsmAI GTCTC 5 cut(s) 21, 233, 795, 939, 999
BsmFI GGGAC 3 cut(s) 77, 312, 422
BsnI GGCC 6 cut(s) 246, 308, 601, 758, 958, 1245
Bso31I GGTCTC 1 cut(s) 21
Bsp1286I GDGCHC 2 cut(s) 747, 1212
Bsp13I TCCGGA 1 cut(s) 977
Bsp143I GATC 7 cut(s) 17, 73, 112, 631, 666, 675, 1258
BspACI CCGC 7 cut(s) 330, 357, 635, 759, 1099, 1188, 1418
BspANI GGCC 6 cut(s) 246, 308, 601, 758, 958, 1245
BspCNI CTCAG 1 cut(s) 1261
BspEI TCCGGA 1 cut(s) 977
BspFNI CGCG 2 cut(s) 156, 332
BspHI TCATGA 1 cut(s) 70
BspLI GGNNCC 3 cut(s) 668, 922, 959
BspMAI CTGCAG 4 cut(s) 491, 697, 1332, 1417
BspOI GCTAGC 1 cut(s) 908
BspPI GGATC 5 cut(s) 626, 661, 670, 674, 1253
BspQI GCTCTTC 2 cut(s) 444, 882
BspT107I GGYRCC 1 cut(s) 920
BspTI CTTAAG 2 cut(s) 211, 1139
BspTNI GGTCTC 1 cut(s) 21
BsrDI GCAATG 5 cut(s) 130, 151, 408, 468, 1201
BsrFI RCCGGY 1 cut(s) 809
BsrI ACTGG 2 cut(s) 247, 326
BssAI RCCGGY 1 cut(s) 809
BssECI CCNNGG 5 cut(s) 234, 532, 1065, 1240, 1443
BssMI GATC 7 cut(s) 17, 73, 112, 631, 666, 675, 1258
BssNI GRCGYC 1 cut(s) 1383
BssT1I CCWWGG 2 cut(s) 532, 1240
Bst2UI CCWGG 5 cut(s) 235, 619, 798, 825, 1066
Bst4CI ACNGT 5 cut(s) 51, 191, 273, 287, 1479
Bst6I CTCTTC 3 cut(s) 19, 444, 882
BstACI GRCGYC 1 cut(s) 1383
BstAFI CTTAAG 2 cut(s) 211, 1139
BstAPI GCANNNNNTGC 1 cut(s) 1324
BstBAI YACGTR 1 cut(s) 1403
BstC8I GCNNGC 3 cut(s) 227, 844, 906
BstDEI CTNAG 3 cut(s) 718, 953, 1269
BstDSI CCRYGG 1 cut(s) 1443
BstF5I GGATG 2 cut(s) 820, 1128
BstFNI CGCG 2 cut(s) 156, 332
BstHHI GCGC 1 cut(s) 158
BstKTI GATC 7 cut(s) 20, 76, 115, 634, 669, 678, 1261
BstMAI GTCTC 5 cut(s) 21, 233, 795, 939, 999
BstMBI GATC 7 cut(s) 17, 73, 112, 631, 666, 675, 1258
BstMCI CGRYCG 1 cut(s) 115
BstNI CCWGG 5 cut(s) 235, 619, 798, 825, 1066
BstNSI RCATGY 2 cut(s) 47, 1038
BstSCI CCNGG 5 cut(s) 233, 617, 796, 823, 1064
BstSFI CTRYAG 4 cut(s) 487, 693, 1328, 1413
BstSLI GKGCMC 1 cut(s) 1212
BstUI CGCG 2 cut(s) 156, 332
BstV1I GCAGC 7 cut(s) 430, 473, 859, 1197, 1314, 1342, 1427
BstV2I GAAGAC 1 cut(s) 54
BstX2I RGATCY 4 cut(s) 17, 631, 666, 675
BstXI CCANNNNNNTGG 1 cut(s) 754
BstYI RGATCY 4 cut(s) 17, 631, 666, 675
Bsu36I CCTNAGG 1 cut(s) 953
BsuI GTATCC 1 cut(s) 555
BsuRI GGCC 6 cut(s) 246, 308, 601, 758, 958, 1245
BtgI CCRYGG 1 cut(s) 1443
BtrI CACGTC 1 cut(s) 1120
BtsCI GGATG 2 cut(s) 820, 1128
BtsIMutI CAGTG 2 cut(s) 138, 269
Cac8I GCNNGC 3 cut(s) 227, 844, 906
CaiI CAGNNNCTG 1 cut(s) 446
CciI TCATGA 1 cut(s) 70
CfoI GCGC 1 cut(s) 158
Cfr10I RCCGGY 1 cut(s) 809
Cfr13I GGNCC 4 cut(s) 306, 388, 957, 1244
CseI GACGC 2 cut(s) 1208, 1391
Csp6I GTAC 5 cut(s) 47, 119, 319, 687, 913
CviAII CATG 5 cut(s) 44, 71, 671, 900, 1035
CviQI GTAC 5 cut(s) 47, 119, 319, 687, 913
DdeI CTNAG 3 cut(s) 718, 953, 1269
DpnI GATC 7 cut(s) 19, 75, 114, 633, 668, 677, 1260
DpnII GATC 7 cut(s) 17, 73, 112, 631, 666, 675, 1258
EaeI YGGCCR 1 cut(s) 756
Eam1104I CTCTTC 3 cut(s) 19, 444, 882
EarI CTCTTC 3 cut(s) 19, 444, 882
EciI GGCGGA 1 cut(s) 624
Eco130I CCWWGG 2 cut(s) 532, 1240
Eco147I AGGCCT 1 cut(s) 601
Eco24I GRGCYC 1 cut(s) 747
Eco31I GGTCTC 1 cut(s) 21
Eco32I GATATC 1 cut(s) 208
Eco47I GGWCC 1 cut(s) 388
Eco57I CTGAAG 2 cut(s) 77, 468
Eco81I CCTNAGG 1 cut(s) 953
EcoO109I RGGNCCY 1 cut(s) 957
EcoRII CCWGG 5 cut(s) 233, 617, 796, 823, 1064
EcoRV GATATC 1 cut(s) 208
EcoT14I CCWWGG 2 cut(s) 532, 1240
EcoT22I ATGCAT 2 cut(s) 151, 901
EcoT38I GRGCYC 1 cut(s) 747
ErhI CCWWGG 2 cut(s) 532, 1240
FaeI CATG 5 cut(s) 47, 74, 674, 903, 1038
FaqI GGGAC 3 cut(s) 77, 312, 422
FatI CATG 5 cut(s) 43, 70, 670, 899, 1034
FauI CCCGC 2 cut(s) 337, 350
FbaI TGATCA 1 cut(s) 73
Fnu4HI GCNGC 8 cut(s) 444, 487, 759, 873, 1186, 1328, 1331, 1416
FokI GGATG 2 cut(s) 807, 1115
FriOI GRGCYC 1 cut(s) 747
Fsp4HI GCNGC 8 cut(s) 444, 487, 759, 873, 1186, 1328, 1331, 1416
FspBI CTAG 3 cut(s) 354, 905, 993
GlaI GCGC 1 cut(s) 157
GluI GCNGC 8 cut(s) 444, 487, 759, 873, 1186, 1328, 1331, 1416
GsaI CCCAGC 1 cut(s) 443
GsuI CTGGAG 1 cut(s) 819
HaeIII GGCC 6 cut(s) 246, 308, 601, 758, 958, 1245
HapII CCGG 3 cut(s) 414, 810, 978
HgaI GACGC 2 cut(s) 1208, 1391
HhaI GCGC 1 cut(s) 158
Hin1I GRCGYC 1 cut(s) 1383
Hin1II CATG 5 cut(s) 47, 74, 674, 903, 1038
Hin6I GCGC 1 cut(s) 156
HinP1I GCGC 1 cut(s) 156
HincII GTYRAC 1 cut(s) 479
HindII GTYRAC 1 cut(s) 479
HindIII AAGCTT 1 cut(s) 227
HinfI GANTC 7 cut(s) 128, 420, 475, 817, 1007, 1112, 1472
HpaII CCGG 3 cut(s) 414, 810, 978
HphI GGTGA 3 cut(s) 556, 743, 1310
Hpy166II GTNNAC 7 cut(s) 119, 404, 479, 1136, 1210, 1275, 1364
Hpy188I TCNGA 5 cut(s) 8, 78, 680, 1078, 1281
Hpy188III TCNNGA 3 cut(s) 21, 71, 978
Hpy8I GTNNAC 7 cut(s) 119, 404, 479, 1136, 1210, 1275, 1364
Hpy99I CGWCG 3 cut(s) 337, 1124, 1224
HpyAV CCTTC 6 cut(s) 319, 535, 722, 1164, 1419, 1442
HpyCH4III ACNGT 5 cut(s) 51, 191, 273, 287, 1479
HpyCH4IV ACGT 2 cut(s) 1119, 1402
HpyF3I CTNAG 3 cut(s) 718, 953, 1269
HpySE526I ACGT 2 cut(s) 1119, 1402
Hsp92I GRCGYC 1 cut(s) 1383
Hsp92II CATG 5 cut(s) 47, 74, 674, 903, 1038
HspAI GCGC 1 cut(s) 156
Kpn2I TCCGGA 1 cut(s) 977
Ksp22I TGATCA 1 cut(s) 73
Kzo9I GATC 7 cut(s) 17, 73, 112, 631, 666, 675, 1258
LguI GCTCTTC 2 cut(s) 444, 882
LmnI GCTCC 2 cut(s) 141, 581
Lsp1109I GCAGC 7 cut(s) 430, 473, 859, 1197, 1314, 1342, 1427
LweI GCATC 2 cut(s) 76, 1314
MaeI CTAG 3 cut(s) 354, 905, 993
MaeII ACGT 2 cut(s) 1119, 1402
MaeIII GTNAC 1 cut(s) 1298
MalI GATC 7 cut(s) 19, 75, 114, 633, 668, 677, 1260
MboI GATC 7 cut(s) 17, 73, 112, 631, 666, 675, 1258
MboII GAAGA 8 cut(s) 36, 54, 215, 461, 746, 869, 1060, 1305
MflI RGATCY 4 cut(s) 17, 631, 666, 675
MhlI GDGCHC 2 cut(s) 747, 1212
MluCI AATT 1 cut(s) 862
MlyI GAGTC 3 cut(s) 484, 1001, 1466
MmeI TCCRAC 2 cut(s) 31, 703
Mph1103I ATGCAT 2 cut(s) 151, 901
MroI TCCGGA 1 cut(s) 977
MseI TTAA 4 cut(s) 212, 651, 1140, 1215
MspA1I CMGCKG 3 cut(s) 443, 1188, 1418
MspCI CTTAAG 2 cut(s) 211, 1139
MspI CCGG 3 cut(s) 414, 810, 978
MspR9I CCNGG 5 cut(s) 235, 619, 798, 825, 1066
MvaI CCWGG 5 cut(s) 235, 619, 798, 825, 1066
MvnI CGCG 2 cut(s) 156, 332
NdeII GATC 7 cut(s) 17, 73, 112, 631, 666, 675, 1258
NheI GCTAGC 1 cut(s) 904
NlaIII CATG 5 cut(s) 47, 74, 674, 903, 1038
NlaIV GGNNCC 3 cut(s) 668, 922, 959
NmeAIII GCCGAG 1 cut(s) 848
NmuCI GTSAC 1 cut(s) 1298
NsiI ATGCAT 2 cut(s) 151, 901
NspI RCATGY 2 cut(s) 47, 1038
PagI TCATGA 1 cut(s) 70
PceI AGGCCT 1 cut(s) 601
PciI ACATGT 2 cut(s) 43, 1034
PciSI GCTCTTC 2 cut(s) 444, 882
PfeI GAWTC 4 cut(s) 128, 420, 817, 1112
PfoI TCCNGGA 1 cut(s) 823
PkrI GCNGC 8 cut(s) 445, 488, 760, 874, 1187, 1329, 1332, 1417
Ple19I CGATCG 1 cut(s) 115
PleI GAGTC 3 cut(s) 483, 1001, 1466
PpsI GAGTC 3 cut(s) 483, 1001, 1466
Ppu21I YACGTR 1 cut(s) 1403
PscI ACATGT 2 cut(s) 43, 1034
Psp6I CCWGG 5 cut(s) 233, 617, 796, 823, 1064
PspFI CCCAGC 1 cut(s) 439
PspGI CCWGG 5 cut(s) 233, 617, 796, 823, 1064
PspN4I GGNNCC 3 cut(s) 668, 922, 959
PspPI GGNCC 4 cut(s) 306, 388, 957, 1244
PstI CTGCAG 4 cut(s) 491, 697, 1332, 1417
PstNI CAGNNNCTG 1 cut(s) 446
PsuI RGATCY 4 cut(s) 17, 631, 666, 675
PvuI CGATCG 1 cut(s) 115
PvuII CAGCTG 1 cut(s) 443
RsaI GTAC 5 cut(s) 48, 120, 320, 688, 914
RsaNI GTAC 5 cut(s) 47, 119, 319, 687, 913
SapI GCTCTTC 2 cut(s) 444, 882
SaqAI TTAA 4 cut(s) 212, 651, 1140, 1215
SatI GCNGC 8 cut(s) 444, 487, 759, 873, 1186, 1328, 1331, 1416
Sau3AI GATC 7 cut(s) 17, 73, 112, 631, 666, 675, 1258
Sau96I GGNCC 4 cut(s) 306, 388, 957, 1244
ScaI AGTACT 3 cut(s) 320, 688, 914
SchI GAGTC 3 cut(s) 484, 1001, 1466
ScrFI CCNGG 5 cut(s) 235, 619, 798, 825, 1066
SduI GDGCHC 2 cut(s) 747, 1212
SfaNI GCATC 2 cut(s) 76, 1314
SfcI CTRYAG 4 cut(s) 487, 693, 1328, 1413
SinI GGWCC 1 cut(s) 388
SmlI CTYRAG 4 cut(s) 87, 211, 1139, 1424
SmoI CTYRAG 4 cut(s) 87, 211, 1139, 1424
Sse9I AATT 1 cut(s) 862
SseBI AGGCCT 1 cut(s) 601
SsiI CCGC 7 cut(s) 330, 357, 635, 759, 1099, 1188, 1418
SspMI CTAG 3 cut(s) 354, 905, 993
StuI AGGCCT 1 cut(s) 601
StyD4I CCNGG 5 cut(s) 233, 617, 796, 823, 1064
StyI CCWWGG 2 cut(s) 532, 1240
TaaI ACNGT 5 cut(s) 51, 191, 273, 287, 1479
TaiI ACGT 2 cut(s) 1122, 1405
TaqI TCGA 3 cut(s) 253, 1029, 1222
TasI AATT 1 cut(s) 862
TatI WGTACW 4 cut(s) 46, 318, 686, 912
TauI GCSGC 1 cut(s) 761
TfiI GAWTC 4 cut(s) 128, 420, 817, 1112
Tru1I TTAA 4 cut(s) 212, 651, 1140, 1215
Tru9I TTAA 4 cut(s) 212, 651, 1140, 1215
TscAI CASTG 2 cut(s) 138, 276
TseFI GTSAC 1 cut(s) 1298
TseI GCWGC 7 cut(s) 443, 486, 872, 1185, 1327, 1330, 1415
Tsp45I GTSAC 1 cut(s) 1298
TspDTI ATGAA 3 cut(s) 809, 875, 1117
TspGWI ACGGA 2 cut(s) 1121, 1460
TspRI CASTG 2 cut(s) 138, 276
Vha464I CTTAAG 2 cut(s) 211, 1139
VneI GTGCAC 1 cut(s) 1208
VpaK11BI GGWCC 1 cut(s) 388
XceI RCATGY 2 cut(s) 47, 1038
XspI CTAG 3 cut(s) 354, 905, 993
ZrmI AGTACT 3 cut(s) 320, 688, 914
Zsp2I ATGCAT 2 cut(s) 151, 901
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.