NatA auxiliary
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 6, 391 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AfaI | GTAC | 1 cut(s) | 180 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 111 |
| AgsI | TTSAA | 3 cut(s) | 239, 364, 386 |
| AluBI | AGCT | 5 cut(s) | 71, 128, 167, 214, 263 |
| AluI | AGCT | 5 cut(s) | 71, 128, 167, 214, 263 |
| Alw21I | GWGCWC | 1 cut(s) | 73 |
| Alw26I | GTCTC | 3 cut(s) | 149, 345, 350 |
| Ama87I | CYCGRG | 1 cut(s) | 248 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 2 cut(s) | 83, 128 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 243 |
| AsuC2I | CCSGG | 2 cut(s) | 112, 176 |
| AsuHPI | GGTGA | 1 cut(s) | 65 |
| AvaI | CYCGRG | 1 cut(s) | 248 |
| BanII | GRGCYC | 1 cut(s) | 73 |
| BbsI | GAAGAC | 2 cut(s) | 108, 393 |
| Bbv12I | GWGCWC | 1 cut(s) | 73 |
| BbvI | GCAGC | 2 cut(s) | 70, 115 |
| BccI | CCATC | 1 cut(s) | 341 |
| BcnI | CCSGG | 2 cut(s) | 112, 176 |
| BcoDI | GTCTC | 3 cut(s) | 149, 345, 350 |
| BfaI | CTAG | 2 cut(s) | 185, 299 |
| BfmI | CTRYAG | 1 cut(s) | 150 |
| BisI | GCNGC | 3 cut(s) | 6, 84, 129 |
| BlsI | GCNGC | 3 cut(s) | 7, 85, 130 |
| Bme1390I | CCNGG | 2 cut(s) | 112, 176 |
| BmeT110I | CYCGRG | 1 cut(s) | 248 |
| BmrFI | CCNGG | 2 cut(s) | 112, 176 |
| BmsI | GCATC | 3 cut(s) | 186, 228, 236 |
| BpiI | GAAGAC | 2 cut(s) | 108, 393 |
| BpuMI | CCSGG | 2 cut(s) | 112, 176 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 111 |
| BseGI | GGATG | 1 cut(s) | 333 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 111 |
| BseMII | CTCAG | 3 cut(s) | 6, 134, 339 |
| BseRI | GAGGAG | 1 cut(s) | 299 |
| BseXI | GCAGC | 2 cut(s) | 70, 115 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsiHKAI | GWGCWC | 1 cut(s) | 73 |
| BsiHKCI | CYCGRG | 1 cut(s) | 248 |
| BsiSI | CCGG | 2 cut(s) | 112, 175 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 111 |
| BsmAI | GTCTC | 3 cut(s) | 149, 345, 350 |
| BsnI | GGCC | 1 cut(s) | 5 |
| BsoBI | CYCGRG | 1 cut(s) | 248 |
| Bsp1286I | GDGCHC | 1 cut(s) | 73 |
| BspACI | CCGC | 2 cut(s) | 6, 391 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspCNI | CTCAG | 3 cut(s) | 7, 133, 340 |
| BstC8I | GCNNGC | 2 cut(s) | 126, 380 |
| BstDEI | CTNAG | 4 cut(s) | 15, 120, 348, 398 |
| BstF5I | GGATG | 1 cut(s) | 333 |
| BstMAI | GTCTC | 3 cut(s) | 149, 345, 350 |
| BstSCI | CCNGG | 2 cut(s) | 110, 174 |
| BstSFI | CTRYAG | 1 cut(s) | 150 |
| BstV1I | GCAGC | 2 cut(s) | 70, 115 |
| BstV2I | GAAGAC | 2 cut(s) | 108, 393 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 1 cut(s) | 333 |
| BtsIMutI | CAGTG | 1 cut(s) | 345 |
| Cac8I | GCNNGC | 2 cut(s) | 126, 380 |
| Csp6I | GTAC | 1 cut(s) | 179 |
| CviAII | CATG | 1 cut(s) | 316 |
| CviQI | GTAC | 1 cut(s) | 179 |
| DdeI | CTNAG | 4 cut(s) | 15, 120, 348, 398 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Ecl136II | GAGCTC | 1 cut(s) | 71 |
| Eco24I | GRGCYC | 1 cut(s) | 73 |
| Eco53kI | GAGCTC | 1 cut(s) | 71 |
| Eco88I | CYCGRG | 1 cut(s) | 248 |
| EcoICRI | GAGCTC | 1 cut(s) | 71 |
| EcoT38I | GRGCYC | 1 cut(s) | 73 |
| FaeI | CATG | 1 cut(s) | 319 |
| FaiI | YATR | 3 cut(s) | 317, 323, 412 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 198, 230, 366, 398 |
| FatI | CATG | 1 cut(s) | 315 |
| Fnu4HI | GCNGC | 3 cut(s) | 6, 84, 129 |
| FokI | GGATG | 1 cut(s) | 320 |
| FriOI | GRGCYC | 1 cut(s) | 73 |
| Fsp4HI | GCNGC | 3 cut(s) | 6, 84, 129 |
| FspBI | CTAG | 2 cut(s) | 185, 299 |
| GluI | GCNGC | 3 cut(s) | 6, 84, 129 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HapII | CCGG | 2 cut(s) | 112, 175 |
| Hin1II | CATG | 1 cut(s) | 319 |
| HinfI | GANTC | 1 cut(s) | 55 |
| HpaII | CCGG | 2 cut(s) | 112, 175 |
| HphI | GGTGA | 1 cut(s) | 65 |
| Hpy188III | TCNNGA | 3 cut(s) | 59, 135, 185 |
| HpyAV | CCTTC | 2 cut(s) | 358, 368 |
| HpyCH4IV | ACGT | 1 cut(s) | 191 |
| HpyCH4V | TGCA | 1 cut(s) | 86 |
| HpyF3I | CTNAG | 4 cut(s) | 15, 120, 348, 398 |
| HpySE526I | ACGT | 1 cut(s) | 191 |
| Hsp92II | CATG | 1 cut(s) | 319 |
| LmnI | GCTCC | 2 cut(s) | 253, 260 |
| LpnPI | CCDG | 5 cut(s) | 72, 125, 188, 242, 350 |
| Lsp1109I | GCAGC | 2 cut(s) | 70, 115 |
| LweI | GCATC | 3 cut(s) | 186, 228, 236 |
| MaeI | CTAG | 2 cut(s) | 185, 299 |
| MaeII | ACGT | 1 cut(s) | 191 |
| MaeIII | GTNAC | 1 cut(s) | 96 |
| MboII | GAAGA | 4 cut(s) | 15, 58, 108, 398 |
| MhlI | GDGCHC | 1 cut(s) | 73 |
| MlyI | GAGTC | 1 cut(s) | 64 |
| MnlI | CCTC | 6 cut(s) | 19, 52, 217, 277, 343, 404 |
| MroXI | GAANNNNTTC | 1 cut(s) | 243 |
| MslI | CAYNNNNRTG | 1 cut(s) | 320 |
| MspI | CCGG | 2 cut(s) | 112, 175 |
| MspR9I | CCNGG | 2 cut(s) | 112, 176 |
| NciI | CCSGG | 2 cut(s) | 112, 176 |
| NlaIII | CATG | 1 cut(s) | 319 |
| NmuCI | GTSAC | 1 cut(s) | 96 |
| PdmI | GAANNNNTTC | 1 cut(s) | 243 |
| PkrI | GCNGC | 3 cut(s) | 7, 85, 130 |
| PleI | GAGTC | 1 cut(s) | 63 |
| PpsI | GAGTC | 1 cut(s) | 63 |
| Psp124BI | GAGCTC | 1 cut(s) | 73 |
| RsaI | GTAC | 1 cut(s) | 180 |
| RsaNI | GTAC | 1 cut(s) | 179 |
| RseI | CAYNNNNRTG | 1 cut(s) | 320 |
| SacI | GAGCTC | 1 cut(s) | 73 |
| SatI | GCNGC | 3 cut(s) | 6, 84, 129 |
| SchI | GAGTC | 1 cut(s) | 64 |
| ScrFI | CCNGG | 2 cut(s) | 112, 176 |
| SduI | GDGCHC | 1 cut(s) | 73 |
| SetI | ASST | 7 cut(s) | 73, 130, 169, 194, 216, 265, 354 |
| SfaNI | GCATC | 3 cut(s) | 186, 228, 236 |
| SfcI | CTRYAG | 1 cut(s) | 150 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 320 |
| SsiI | CCGC | 2 cut(s) | 6, 391 |
| SspMI | CTAG | 2 cut(s) | 185, 299 |
| SstI | GAGCTC | 1 cut(s) | 73 |
| StyD4I | CCNGG | 2 cut(s) | 110, 174 |
| TaiI | ACGT | 1 cut(s) | 194 |
| TaqI | TCGA | 2 cut(s) | 44, 222 |
| TauI | GCSGC | 1 cut(s) | 8 |
| TscAI | CASTG | 1 cut(s) | 352 |
| TseFI | GTSAC | 1 cut(s) | 96 |
| TseI | GCWGC | 2 cut(s) | 83, 128 |
| Tsp45I | GTSAC | 1 cut(s) | 96 |
| TspRI | CASTG | 1 cut(s) | 352 |
| XbaI | TCTAGA | 1 cut(s) | 184 |
| XmnI | GAANNNNTTC | 1 cut(s) | 243 |
| XspI | CTAG | 2 cut(s) | 185, 299 |