Plant mobile domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 3 cut(s) | 48, 126, 223 |
| AbsI | CCTCGAGG | 1 cut(s) | 335 |
| AccB1I | GGYRCC | 1 cut(s) | 705 |
| AccII | CGCG | 3 cut(s) | 119, 186, 216 |
| AccIII | TCCGGA | 1 cut(s) | 343 |
| AciI | CCGC | 6 cut(s) | 41, 119, 173, 195, 216, 738 |
| AclWI | GGATC | 2 cut(s) | 335, 348 |
| AcoI | YGGCCR | 2 cut(s) | 288, 941 |
| AcsI | RAATTY | 1 cut(s) | 563 |
| AcuI | CTGAAG | 1 cut(s) | 417 |
| AcvI | CACGTG | 1 cut(s) | 947 |
| AcyI | GRCGYC | 3 cut(s) | 45, 123, 220 |
| AfaI | GTAC | 2 cut(s) | 501, 701 |
| AfeI | AGCGCT | 2 cut(s) | 55, 100 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 152 |
| AflII | CTTAAG | 1 cut(s) | 592 |
| AflIII | ACRYGT | 1 cut(s) | 946 |
| AgsI | TTSAA | 3 cut(s) | 304, 313, 481 |
| AleI | CACNNNNGTG | 2 cut(s) | 73, 248 |
| AluBI | AGCT | 8 cut(s) | 437, 484, 610, 660, 824, 835, 867, 898 |
| AluI | AGCT | 8 cut(s) | 437, 484, 610, 660, 824, 835, 867, 898 |
| Alw26I | GTCTC | 1 cut(s) | 632 |
| AlwI | GGATC | 2 cut(s) | 335, 348 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 827 |
| Ama87I | CYCGRG | 2 cut(s) | 335, 615 |
| Aor13HI | TCCGGA | 1 cut(s) | 343 |
| Aor51HI | AGCGCT | 2 cut(s) | 55, 100 |
| AoxI | GGCC | 4 cut(s) | 288, 294, 621, 941 |
| ApeKI | GCWGC | 2 cut(s) | 824, 867 |
| ApoI | RAATTY | 1 cut(s) | 563 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 309, 341 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 816 |
| AspLEI | GCGC | 2 cut(s) | 56, 101 |
| AspS9I | GGNCC | 2 cut(s) | 161, 769 |
| AvaI | CYCGRG | 2 cut(s) | 335, 615 |
| AvaII | GGWCC | 2 cut(s) | 161, 769 |
| BaeGI | GKGCMC | 1 cut(s) | 710 |
| BalI | TGGCCA | 2 cut(s) | 290, 943 |
| BamHI | GGATCC | 1 cut(s) | 340 |
| BanI | GGYRCC | 1 cut(s) | 705 |
| BanII | GRGCYC | 1 cut(s) | 403 |
| BbrPI | CACGTG | 1 cut(s) | 947 |
| BbvCI | CCTCAGC | 1 cut(s) | 828 |
| BbvI | GCAGC | 2 cut(s) | 811, 854 |
| BccI | CCATC | 3 cut(s) | 356, 394, 758 |
| BceAI | ACGGC | 1 cut(s) | 855 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 653, 687 |
| BcoDI | GTCTC | 1 cut(s) | 632 |
| BfaI | CTAG | 1 cut(s) | 735 |
| BfoI | RGCGCY | 2 cut(s) | 57, 102 |
| BfrI | CTTAAG | 1 cut(s) | 592 |
| BisI | GCNGC | 3 cut(s) | 196, 825, 868 |
| BlsI | GCNGC | 3 cut(s) | 197, 826, 869 |
| BmcAI | AGTACT | 1 cut(s) | 701 |
| Bme18I | GGWCC | 2 cut(s) | 161, 769 |
| BmeT110I | CYCGRG | 2 cut(s) | 335, 615 |
| BmgT120I | GGNCC | 2 cut(s) | 161, 769 |
| BmiI | GGNNCC | 3 cut(s) | 162, 342, 707 |
| BmrI | ACTGGG | 2 cut(s) | 405, 580 |
| BmsI | GCATC | 2 cut(s) | 391, 683 |
| BmuI | ACTGGG | 2 cut(s) | 405, 580 |
| BpmI | CTGGAG | 1 cut(s) | 431 |
| Bpu10I | CCTNAGC | 2 cut(s) | 50, 828 |
| BpuEI | CTTGAG | 1 cut(s) | 387 |
| Bsa29I | ATCGAT | 1 cut(s) | 411 |
| BsaAI | YACGTR | 1 cut(s) | 947 |
| BsaHI | GRCGYC | 3 cut(s) | 45, 123, 220 |
| BsaI | GGTCTC | 1 cut(s) | 632 |
| BsaJI | CCNNGG | 2 cut(s) | 291, 913 |
| BsaWI | WCCGGW | 1 cut(s) | 343 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 152 |
| Bse118I | RCCGGY | 1 cut(s) | 623 |
| Bse1I | ACTGG | 4 cut(s) | 400, 448, 575, 707 |
| Bse3DI | GCAATG | 1 cut(s) | 789 |
| BseAI | TCCGGA | 1 cut(s) | 343 |
| BseCI | ATCGAT | 1 cut(s) | 411 |
| BseDI | CCNNGG | 2 cut(s) | 291, 913 |
| BseGI | GGATG | 2 cut(s) | 382, 441 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 152 |
| BseMI | GCAATG | 1 cut(s) | 789 |
| BseMII | CTCAG | 3 cut(s) | 482, 502, 819 |
| BseNI | ACTGG | 4 cut(s) | 400, 448, 575, 707 |
| BseRI | GAGGAG | 2 cut(s) | 456, 845 |
| BseSI | GKGCMC | 1 cut(s) | 710 |
| BseXI | GCAGC | 2 cut(s) | 811, 854 |
| Bsh1236I | CGCG | 3 cut(s) | 119, 186, 216 |
| Bsh1285I | CGRYCG | 2 cut(s) | 496, 667 |
| BshFI | GGCC | 4 cut(s) | 290, 296, 623, 943 |
| BshNI | GGYRCC | 1 cut(s) | 705 |
| BshVI | ATCGAT | 1 cut(s) | 411 |
| BsiEI | CGRYCG | 2 cut(s) | 496, 667 |
| BsiHKCI | CYCGRG | 2 cut(s) | 335, 615 |
| BsiSI | CCGG | 2 cut(s) | 344, 624 |
| BslFI | GGGAC | 2 cut(s) | 334, 401 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 152 |
| BsmAI | GTCTC | 1 cut(s) | 632 |
| BsmFI | GGGAC | 2 cut(s) | 334, 401 |
| BsmI | GAATGC | 1 cut(s) | 43 |
| BsnI | GGCC | 4 cut(s) | 290, 296, 623, 943 |
| Bso31I | GGTCTC | 1 cut(s) | 632 |
| BsoBI | CYCGRG | 2 cut(s) | 335, 615 |
| Bsp1286I | GDGCHC | 2 cut(s) | 403, 710 |
| Bsp13I | TCCGGA | 1 cut(s) | 343 |
| Bsp143I | GATC | 3 cut(s) | 265, 340, 493 |
| Bsp19I | CCATGG | 1 cut(s) | 291 |
| BspACI | CCGC | 6 cut(s) | 41, 119, 173, 195, 216, 738 |
| BspANI | GGCC | 4 cut(s) | 290, 296, 623, 943 |
| BspCNI | CTCAG | 3 cut(s) | 481, 501, 820 |
| BspDI | ATCGAT | 1 cut(s) | 411 |
| BspEI | TCCGGA | 1 cut(s) | 343 |
| BspFNI | CGCG | 3 cut(s) | 119, 186, 216 |
| BspLI | GGNNCC | 3 cut(s) | 162, 342, 707 |
| BspPI | GGATC | 2 cut(s) | 335, 348 |
| BspT107I | GGYRCC | 1 cut(s) | 705 |
| BspTI | CTTAAG | 1 cut(s) | 592 |
| BspTNI | GGTCTC | 1 cut(s) | 632 |
| BsrDI | GCAATG | 1 cut(s) | 789 |
| BsrFI | RCCGGY | 1 cut(s) | 623 |
| BsrI | ACTGG | 4 cut(s) | 400, 448, 575, 707 |
| BssAI | RCCGGY | 1 cut(s) | 623 |
| BssECI | CCNNGG | 2 cut(s) | 291, 913 |
| BssMI | GATC | 3 cut(s) | 265, 340, 493 |
| BssNI | GRCGYC | 3 cut(s) | 45, 123, 220 |
| BssT1I | CCWWGG | 2 cut(s) | 291, 913 |
| Bst4CI | ACNGT | 3 cut(s) | 325, 509, 668 |
| Bst6I | CTCTTC | 2 cut(s) | 24, 199 |
| BstACI | GRCGYC | 3 cut(s) | 45, 123, 220 |
| BstAFI | CTTAAG | 1 cut(s) | 592 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 536 |
| BstBAI | YACGTR | 1 cut(s) | 947 |
| BstDEI | CTNAG | 4 cut(s) | 50, 468, 488, 828 |
| BstDSI | CCRYGG | 1 cut(s) | 291 |
| BstF5I | GGATG | 2 cut(s) | 382, 441 |
| BstFNI | CGCG | 3 cut(s) | 119, 186, 216 |
| BstH2I | RGCGCY | 2 cut(s) | 57, 102 |
| BstHHI | GCGC | 2 cut(s) | 56, 101 |
| BstKTI | GATC | 3 cut(s) | 268, 343, 496 |
| BstMAI | GTCTC | 1 cut(s) | 632 |
| BstMBI | GATC | 3 cut(s) | 265, 340, 493 |
| BstMCI | CGRYCG | 2 cut(s) | 496, 667 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 192, 536, 644, 909 |
| BstSLI | GKGCMC | 1 cut(s) | 710 |
| BstUI | CGCG | 3 cut(s) | 119, 186, 216 |
| BstV1I | GCAGC | 2 cut(s) | 811, 854 |
| BstX2I | RGATCY | 1 cut(s) | 340 |
| BstYI | RGATCY | 1 cut(s) | 340 |
| Bsu15I | ATCGAT | 1 cut(s) | 411 |
| BsuRI | GGCC | 4 cut(s) | 290, 296, 623, 943 |
| BsuTUI | ATCGAT | 1 cut(s) | 411 |
| BtgI | CCRYGG | 1 cut(s) | 291 |
| BtsCI | GGATG | 2 cut(s) | 382, 441 |
| BtsI | GCAGTG | 1 cut(s) | 532 |
| BtsIMutI | CAGTG | 5 cut(s) | 90, 164, 455, 519, 532 |
| CaiI | CAGNNNCTG | 1 cut(s) | 827 |
| CfoI | GCGC | 2 cut(s) | 56, 101 |
| Cfr10I | RCCGGY | 1 cut(s) | 623 |
| Cfr13I | GGNCC | 2 cut(s) | 161, 769 |
| ClaI | ATCGAT | 1 cut(s) | 411 |
| CseI | GACGC | 1 cut(s) | 359 |
| Csp6I | GTAC | 2 cut(s) | 500, 700 |
| CviAII | CATG | 2 cut(s) | 292, 939 |
| CviQI | GTAC | 2 cut(s) | 500, 700 |
| DdeI | CTNAG | 4 cut(s) | 50, 468, 488, 828 |
| DpnI | GATC | 3 cut(s) | 267, 342, 495 |
| DpnII | GATC | 3 cut(s) | 265, 340, 493 |
| EaeI | YGGCCR | 2 cut(s) | 288, 941 |
| Eam1104I | CTCTTC | 2 cut(s) | 24, 199 |
| EarI | CTCTTC | 2 cut(s) | 24, 199 |
| Eco130I | CCWWGG | 2 cut(s) | 291, 913 |
| Eco24I | GRGCYC | 1 cut(s) | 403 |
| Eco31I | GGTCTC | 1 cut(s) | 632 |
| Eco32I | GATATC | 1 cut(s) | 589 |
| Eco47I | GGWCC | 2 cut(s) | 161, 769 |
| Eco47III | AGCGCT | 2 cut(s) | 55, 100 |
| Eco57I | CTGAAG | 1 cut(s) | 417 |
| Eco72I | CACGTG | 1 cut(s) | 947 |
| Eco88I | CYCGRG | 2 cut(s) | 335, 615 |
| EcoRI | GAATTC | 1 cut(s) | 563 |
| EcoRV | GATATC | 1 cut(s) | 589 |
| EcoT14I | CCWWGG | 2 cut(s) | 291, 913 |
| EcoT38I | GRGCYC | 1 cut(s) | 403 |
| ErhI | CCWWGG | 2 cut(s) | 291, 913 |
| FaeI | CATG | 2 cut(s) | 295, 942 |
| FaiI | YATR | 7 cut(s) | 293, 426, 459, 683, 807, 894, 940 |
| FaqI | GGGAC | 2 cut(s) | 334, 401 |
| FatI | CATG | 2 cut(s) | 291, 938 |
| FauI | CCCGC | 1 cut(s) | 731 |
| Fnu4HI | GCNGC | 3 cut(s) | 196, 825, 868 |
| FokI | GGATG | 2 cut(s) | 369, 428 |
| FriOI | GRGCYC | 1 cut(s) | 403 |
| Fsp4HI | GCNGC | 3 cut(s) | 196, 825, 868 |
| FspBI | CTAG | 1 cut(s) | 735 |
| GlaI | GCGC | 2 cut(s) | 55, 100 |
| GluI | GCNGC | 3 cut(s) | 196, 825, 868 |
| GsuI | CTGGAG | 1 cut(s) | 431 |
| HaeII | RGCGCY | 2 cut(s) | 57, 102 |
| HaeIII | GGCC | 4 cut(s) | 290, 296, 623, 943 |
| HapII | CCGG | 2 cut(s) | 344, 624 |
| HgaI | GACGC | 1 cut(s) | 359 |
| HhaI | GCGC | 2 cut(s) | 56, 101 |
| Hin1I | GRCGYC | 3 cut(s) | 45, 123, 220 |
| Hin1II | CATG | 2 cut(s) | 295, 942 |
| Hin6I | GCGC | 2 cut(s) | 54, 99 |
| HinP1I | GCGC | 2 cut(s) | 54, 99 |
| HincII | GTYRAC | 2 cut(s) | 393, 860 |
| HindII | GTYRAC | 2 cut(s) | 393, 860 |
| HindIII | AAGCTT | 2 cut(s) | 482, 608 |
| HinfI | GANTC | 6 cut(s) | 9, 61, 139, 236, 454, 856 |
| HpaII | CCGG | 2 cut(s) | 344, 624 |
| Hpy166II | GTNNAC | 6 cut(s) | 90, 164, 393, 453, 500, 860 |
| Hpy188I | TCNGA | 2 cut(s) | 265, 471 |
| Hpy188III | TCNNGA | 4 cut(s) | 26, 201, 344, 617 |
| Hpy8I | GTNNAC | 6 cut(s) | 90, 164, 393, 453, 500, 860 |
| HpyAV | CCTTC | 2 cut(s) | 307, 441 |
| HpyCH4III | ACNGT | 3 cut(s) | 325, 509, 668 |
| HpyCH4IV | ACGT | 4 cut(s) | 45, 123, 220, 946 |
| HpyCH4V | TGCA | 6 cut(s) | 376, 382, 530, 539, 674, 903 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 192, 536, 644, 909 |
| HpyF3I | CTNAG | 4 cut(s) | 50, 468, 488, 828 |
| HpySE526I | ACGT | 4 cut(s) | 45, 123, 220, 946 |
| Hsp92I | GRCGYC | 3 cut(s) | 45, 123, 220 |
| Hsp92II | CATG | 2 cut(s) | 295, 942 |
| HspAI | GCGC | 2 cut(s) | 54, 99 |
| Kpn2I | TCCGGA | 1 cut(s) | 343 |
| Kzo9I | GATC | 3 cut(s) | 265, 340, 493 |
| LmnI | GCTCC | 2 cut(s) | 522, 832 |
| Lsp1109I | GCAGC | 2 cut(s) | 811, 854 |
| LweI | GCATC | 2 cut(s) | 391, 683 |
| MaeI | CTAG | 1 cut(s) | 735 |
| MaeII | ACGT | 4 cut(s) | 45, 123, 220, 946 |
| MaeIII | GTNAC | 2 cut(s) | 254, 325 |
| MalI | GATC | 3 cut(s) | 267, 342, 495 |
| MboI | GATC | 3 cut(s) | 265, 340, 493 |
| MboII | GAAGA | 8 cut(s) | 41, 46, 124, 216, 221, 292, 596, 940 |
| MflI | RGATCY | 1 cut(s) | 340 |
| MhlI | GDGCHC | 2 cut(s) | 403, 710 |
| MlsI | TGGCCA | 2 cut(s) | 290, 943 |
| MluCI | AATT | 1 cut(s) | 563 |
| MluNI | TGGCCA | 2 cut(s) | 290, 943 |
| MlyI | GAGTC | 2 cut(s) | 448, 865 |
| Mox20I | TGGCCA | 2 cut(s) | 290, 943 |
| MroI | TCCGGA | 1 cut(s) | 343 |
| MroXI | GAANNNNTTC | 1 cut(s) | 816 |
| MscI | TGGCCA | 2 cut(s) | 290, 943 |
| MseI | TTAA | 1 cut(s) | 593 |
| MslI | CAYNNNNRTG | 2 cut(s) | 73, 248 |
| Msp20I | TGGCCA | 2 cut(s) | 290, 943 |
| MspA1I | CMGCKG | 1 cut(s) | 824 |
| MspCI | CTTAAG | 1 cut(s) | 592 |
| MspI | CCGG | 2 cut(s) | 344, 624 |
| Mva1269I | GAATGC | 1 cut(s) | 43 |
| MvnI | CGCG | 3 cut(s) | 119, 186, 216 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 192, 536, 644, 909 |
| NcoI | CCATGG | 1 cut(s) | 291 |
| NdeII | GATC | 3 cut(s) | 265, 340, 493 |
| NlaIII | CATG | 2 cut(s) | 295, 942 |
| NlaIV | GGNNCC | 3 cut(s) | 162, 342, 707 |
| NmuCI | GTSAC | 2 cut(s) | 254, 325 |
| OliI | CACNNNNGTG | 2 cut(s) | 73, 248 |
| PaeR7I | CTCGAG | 1 cut(s) | 335 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 274 |
| PctI | GAATGC | 1 cut(s) | 43 |
| PdmI | GAANNNNTTC | 1 cut(s) | 816 |
| PfeI | GAWTC | 4 cut(s) | 9, 61, 139, 236 |
| PkrI | GCNGC | 3 cut(s) | 197, 826, 869 |
| Ple19I | CGATCG | 1 cut(s) | 496 |
| PleI | GAGTC | 2 cut(s) | 448, 864 |
| PmaCI | CACGTG | 1 cut(s) | 947 |
| PmlI | CACGTG | 1 cut(s) | 947 |
| PpsI | GAGTC | 2 cut(s) | 448, 864 |
| Ppu21I | YACGTR | 1 cut(s) | 947 |
| PspCI | CACGTG | 1 cut(s) | 947 |
| PspN4I | GGNNCC | 3 cut(s) | 162, 342, 707 |
| PspPI | GGNCC | 2 cut(s) | 161, 769 |
| PspXI | VCTCGAGB | 1 cut(s) | 335 |
| PstNI | CAGNNNCTG | 1 cut(s) | 827 |
| PsuI | RGATCY | 1 cut(s) | 340 |
| PvuI | CGATCG | 1 cut(s) | 496 |
| PvuII | CAGCTG | 1 cut(s) | 824 |
| RsaI | GTAC | 2 cut(s) | 501, 701 |
| RsaNI | GTAC | 2 cut(s) | 500, 700 |
| RseI | CAYNNNNRTG | 2 cut(s) | 73, 248 |
| SaqAI | TTAA | 1 cut(s) | 593 |
| SatI | GCNGC | 3 cut(s) | 196, 825, 868 |
| Sau3AI | GATC | 3 cut(s) | 265, 340, 493 |
| Sau96I | GGNCC | 2 cut(s) | 161, 769 |
| ScaI | AGTACT | 1 cut(s) | 701 |
| SchI | GAGTC | 2 cut(s) | 448, 865 |
| SduI | GDGCHC | 2 cut(s) | 403, 710 |
| SfaNI | GCATC | 2 cut(s) | 391, 683 |
| Sfr274I | CTCGAG | 1 cut(s) | 335 |
| SinI | GGWCC | 2 cut(s) | 161, 769 |
| SlaI | CTCGAG | 1 cut(s) | 335 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 73, 248 |
| SmlI | CTYRAG | 3 cut(s) | 335, 402, 592 |
| SmoI | CTYRAG | 3 cut(s) | 335, 402, 592 |
| Sse9I | AATT | 1 cut(s) | 563 |
| SsiI | CCGC | 6 cut(s) | 41, 119, 173, 195, 216, 738 |
| SspMI | CTAG | 1 cut(s) | 735 |
| StyI | CCWWGG | 2 cut(s) | 291, 913 |
| TaaI | ACNGT | 3 cut(s) | 325, 509, 668 |
| TaiI | ACGT | 4 cut(s) | 48, 126, 223, 949 |
| TaqI | TCGA | 3 cut(s) | 336, 411, 634 |
| TasI | AATT | 1 cut(s) | 563 |
| TatI | WGTACW | 1 cut(s) | 699 |
| TauI | GCSGC | 1 cut(s) | 198 |
| TfiI | GAWTC | 4 cut(s) | 9, 61, 139, 236 |
| Tru1I | TTAA | 1 cut(s) | 593 |
| Tru9I | TTAA | 1 cut(s) | 593 |
| TscAI | CASTG | 5 cut(s) | 97, 171, 455, 519, 532 |
| TseFI | GTSAC | 2 cut(s) | 254, 325 |
| TseI | GCWGC | 2 cut(s) | 824, 867 |
| Tsp45I | GTSAC | 2 cut(s) | 254, 325 |
| TspDTI | ATGAA | 2 cut(s) | 825, 927 |
| TspGWI | ACGGA | 1 cut(s) | 120 |
| TspRI | CASTG | 5 cut(s) | 97, 171, 455, 519, 532 |
| Vha464I | CTTAAG | 1 cut(s) | 592 |
| VpaK11BI | GGWCC | 2 cut(s) | 161, 769 |
| XapI | RAATTY | 1 cut(s) | 563 |
| XhoI | CTCGAG | 1 cut(s) | 335 |
| XmnI | GAANNNNTTC | 1 cut(s) | 816 |
| XspI | CTAG | 1 cut(s) | 735 |
| ZraI | GACGTC | 3 cut(s) | 46, 124, 221 |
| ZrmI | AGTACT | 1 cut(s) | 701 |