RchiOBHm_Chr0c39g0503201

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_chinensis
Unknown
OG0000047
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2802 bp
ATGAAAACTTTGCTACATTTCTTCCTTTTCTTGATCACACTCTGGGTCAGTATCATCATCCCAGCAGTTCATAGCCAGTGTATTAAAAACCAGCAACTATCACTACTCCAATTCAAGAAAGGCCTCGTGTTCAATCATTCCACCAAGCTTATTTCTTGGAATGCAAGTACTGATTGTTGTTCCTGGGTCGGCATCACCTGCAGCCGTAATGGGCATGTTCTGGGTCTTGACATAAGCTTCGAACATATCTCAGTTAATTCCAGCAGTCTCTTCCATCTTCATTATCTTCAATCTTTATCCGTAATTAAGTTGGATGGGAACAATATCTCTGCACCAGTTCCAGGATTCTTTGCCAACTTTTCAAACTTGACTATCTTGAGTCTCCAGGGATGCAACTTGCATGGAACATTTCCCAAAGAGATCTTTCAGTTACCTTCTCTACAAAGTATTGACCTTTCATATAATCAGCAACTTGATGGTTCCTTGCCAGAATTCCCAAGGAATGGATCTCTTCGGAACCTGCATCTAAGCTGGACAAAATTTTCAGGGTTATTGCCAAATTCTATTGGCAACCTCAAAATGTTGTCCACCATAGATATTGACGCTTGCGAGTTCACCGGACCGATGCCCAAGTCAATGACAAACCTTACACAATTGGTTTCTTTGTCGATGTCTTTTAACAAGTTGGAAGGTTCAATTCCGTCATTCAGTGGGGCCAATAATGTGGGCGACATAGACCTTTCCTACAATGGTCTAACAGGTACTATTAATTCCACTCACTGGAGAAACCTTACTAAGCTATCCTCTCTCATTTTGAGCTCTAATAAGCTCAATGGGAATATCCCAGCATCTCTGTTTTCCCTAAACCTAAGCCCAACGGGTCTTCTAGATCTTTCTGGCAATCAATTCTCTGGTCCATTCCCTGAAACTTCAAATGTGTCTTCCTACTTGCCGAATGGTCTTAATCTTAGAGTTGATTTCAGTAGCAATAATCTAGAAGGGCCGATACCTATGTCTATCTTTAGCTTGCGAGGTCTTAAAACTCTAGATCTTTCTTCAAATAATTTAAGTGGCTCGTTTCCTCTTGATGGTCTACACCAGCTGAGAAATCTTTCTGAACTTGATCTTTCACACAATAACTTGTTTCTTACCCATGATTATACCAATTTCTCATATTCCTCATTTTCTCAACTATCTAAGCTGAGCTTGGCGTCATTGAAATTGAGAACATTTCCTAATTTCTTGAGGAATCGATCTAACTTGATAGGATTGGACCTTTCAGATAACCAGATAAATGGCAAGATACCCAACTGGATTTGGAGTTTAAGTAATCTTGAGTCCCTGAACCTTTCTTGCAATTCCCTAGATTCTCTAAATGTTCATTCAATCAATATCACTAATCTAGATAACCTTGACCTTCATTCCAATCAGTTTCATGGGCAAATCCCAAATTTTCAGCCACCTTGCTATCTCTATTATCTAGATTTCTCAAAGAATTATTTCAGCTCTATCATACCGAGTACCATTGGAGATGTGCTTCTTAGTATTGGAATCTTTTCGCTTTCTAGCAATAACCTCAATGGGATCATTCCAGAATCATTATGCAATTCACCGTATCTTACCATTCTTGATCTGTCCAATAATTCATTGAGTGGCACGATTCCCCAGTGCTTGACTACAATGAGCTCGCTTGCAGTACTCAATTTGAGGAGAAACAATCTTACAAATGTTGATGAATTCTCTCATAATTGCAGTTTAAAGAAACTAGACATCAGTGGAAATCATATTCAAGGCCAGTTTCTAAAATCTCTTGTGAACTGCACCCAGTTAGAGATTTTAAACCTTGGAAACAATCTGATAACAGAACCATTTCCATGCTTTTTGAGGAACATATCCACGTTGAGTGTTCTTGTCTTGCGGTCCAATAAATTTTTTGGGCACATTGGTTGTCGCAAGACTAATGGCACTTGGCCAGTACTTCGAATGATAGACCTAGCTCACAACAATTTTAGTGGAGAAATACCTGGAAGAGATTTGACAACTTGGCAGGCCATGAGGACTAGTAAAGGTGATGCCCCATTGAATATCAGTAACCTTCAATGGTTGTATGCTGGAGCTTCTTTTCAAGAAGATACAATCATGGTTACCAACAAAGGTTCTGAGATGGAGCTGGTGAATGTTTTAACACTCTTCACCTCGATTGATTTCTCATGCAACAAGTTCAACGGATCAATACCGGAGGAAATTGGAGAACTCAAATCATTATATGCCCTCAACTTGTCCAACAATGCTTTCACAGGTGCACTTCCATCATCATTAGGTAACTTGAGTGAGCTAGAGTCTTTGGACCTCTCGAAAAATAAACTGAGCGGTCAAATCCCACTGGAGCTTACAAAACTCACTTTCCTTGCATTCTTGAATCTCTCATATAATCAATTGGTCGGGAGGATACCAAGCGGTGCTCAATTTTCAACATTTGATGCAGCTTCCTTCGAAGGTAACAAAGGATTATGGGGGCCTCCTTTAACAGCAGATAATAACACAGGCTTCTCACCACCAAAGCAGGAAGGCAACCATTCAAATTTGGGACATGAAATTGATTGGGATATTATCTGTCCTGAAATTGGATTTACATGTGGGTTTGGGATTGCCATCGGGTCACTTTTGTTCTGCAAGAGATGGAGGAAATGGTATTACAGAGCTATGTATAACATGCTTCTAAAGATATTCCCTCAGCTGGAACGAAGATTTGGTCATCATAGGAGACATGTTTATGTACATCAGAGATACTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

933

Amino Acids

103.76

Weight (kDa)

7.58

Isoelectric Point (pI)

37.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 68 1.9e-11 Leucine rich repeat N-terminal domain
LRR_8 PF13855 98 - 156 4.8e-08 Leucine rich repeat
LRR_14 PF23598 170 - 226 7.3e-07 Leucine-rich repeat region
LRR_8 PF13855 328 - 381 7.7e-07 Leucine rich repeat
LRR_8 PF13855 538 - 596 6.2e-10 Leucine rich repeat
LRR_14 PF23598 744 - 808 5.4e-06 Leucine-rich repeat region
LRR_8 PF13855 754 - 813 9.9e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 206
Acc36I ACCTGC 2 cut(s) 206, 528
AccB7I CCANNNNNTGG 2 cut(s) 503, 780
AccBSI CCGCTC 1 cut(s) 2370
AccI GTMKAC 1 cut(s) 1093
AciI CCGC 3 cut(s) 1918, 2370, 2457
AclWI GGATC 3 cut(s) 514, 1592, 2236
AcoI YGGCCR 1 cut(s) 1970
AcsI RAATTY 7 cut(s) 491, 539, 559, 1450, 1736, 1928, 2581
AcyI GRCGYC 1 cut(s) 1211
AfaI GTAC 6 cut(s) 169, 763, 1522, 1698, 1977, 2778
AfiI CCNNNNNNNGG 6 cut(s) 341, 503, 780, 1088, 2624, 2737
AflIII ACRYGT 2 cut(s) 2633, 2767
AhlI ACTAGT 1 cut(s) 2060
AjnI CCWGG 4 cut(s) 182, 340, 384, 2023
AjuI GAANNNNNNNTTGG 4 cut(s) 2276, 2308, 2733, 2765
Alw21I GWGCWC 4 cut(s) 821, 1688, 2305, 2464
Alw26I GTCTC 4 cut(s) 272, 386, 2758, 2788
Alw44I GTGCAC 1 cut(s) 2301
AlwI GGATC 3 cut(s) 514, 1592, 2236
AoxI GGCC 7 cut(s) 121, 714, 1001, 1792, 1970, 2049, 2516
ApaLI GTGCAC 1 cut(s) 2301
ApeKI GCWGC 2 cut(s) 201, 2483
ApoI RAATTY 7 cut(s) 491, 539, 559, 1450, 1736, 1928, 2581
ArsI GACNNNNNNTTYG 4 cut(s) 221, 253, 2737, 2769
AseI ATTAAT 1 cut(s) 768
Asp700I GAANNNNTTC 4 cut(s) 1111, 1499, 1555, 1869
AspS9I GGNCC 8 cut(s) 620, 714, 914, 1001, 1273, 1920, 2347, 2516
AsuHPI GGTGA 7 cut(s) 187, 607, 1602, 2081, 2185, 2185, 2544
AsuII TTCGAA 3 cut(s) 240, 1981, 2493
AvaII GGWCC 5 cut(s) 620, 914, 1273, 1920, 2347
BaeGI GKGCMC 2 cut(s) 1941, 2305
BaeI ACNNNNGTAYC 2 cut(s) 998, 1031
BalI TGGCCA 1 cut(s) 1972
BanII GRGCYC 2 cut(s) 821, 1688
BarI GAAGNNNNNNTAC 2 cut(s) 990, 1022
BauI CACGAG 1 cut(s) 125
BbsI GAAGAC 2 cut(s) 875, 933
Bbv12I GWGCWC 4 cut(s) 821, 1688, 2305, 2464
BbvCI CCTCAGC 1 cut(s) 2733
BbvI GCAGC 2 cut(s) 213, 2495
BccI CCATC 8 cut(s) 282, 308, 470, 1082, 2158, 2317, 2660, 2673
BceAI ACGGC 1 cut(s) 189
BciT130I CCWGG 4 cut(s) 184, 342, 386, 2025
BciVI GTATCC 1 cut(s) 2442
BclI TGATCA 1 cut(s) 33
BcoDI GTCTC 4 cut(s) 272, 386, 2758, 2788
BcuI ACTAGT 1 cut(s) 2060
BfmI CTRYAG 1 cut(s) 199
BfuAI ACCTGC 2 cut(s) 206, 528
BfuI GTATCC 1 cut(s) 2442
BglII AGATCT 3 cut(s) 420, 889, 1048
BisI GCNGC 2 cut(s) 202, 2484
BlpI GCTNAGC 1 cut(s) 1202
BlsI GCNGC 2 cut(s) 203, 2485
BmcAI AGTACT 3 cut(s) 169, 1698, 1977
Bme1390I CCNGG 4 cut(s) 184, 342, 386, 2025
Bme18I GGWCC 5 cut(s) 620, 914, 1273, 1920, 2347
BmgT120I GGNCC 8 cut(s) 620, 714, 914, 1001, 1273, 1920, 2347, 2516
BmiI GGNNCC 4 cut(s) 481, 518, 715, 2517
BmrFI CCNGG 4 cut(s) 184, 342, 386, 2025
BmrI ACTGGG 2 cut(s) 1660, 1819
BmsI GCATC 7 cut(s) 201, 380, 532, 615, 857, 2062, 2470
BmuI ACTGGG 2 cut(s) 1660, 1819
BpiI GAAGAC 2 cut(s) 875, 933
BpmI CTGGAG 4 cut(s) 368, 802, 2133, 2405
Bpu10I CCTNAGC 2 cut(s) 869, 2733
Bpu1102I GCTNAGC 1 cut(s) 1202
Bpu14I TTCGAA 3 cut(s) 240, 1981, 2493
BpuEI CTTGAG 4 cut(s) 397, 1264, 1355, 2347
Bsa29I ATCGAT 1 cut(s) 1252
BsaBI GATNNNNATC 1 cut(s) 2651
BsaHI GRCGYC 1 cut(s) 1211
BsaJI CCNNGG 4 cut(s) 183, 385, 497, 1843
BsaWI WCCGGW 2 cut(s) 617, 2236
BsaXI ACNNNNNCTCC 2 cut(s) 1312, 1342
Bsc4I CCNNNNNNNGG 6 cut(s) 341, 503, 780, 1088, 2624, 2737
Bse8I GATNNNNATC 1 cut(s) 2651
BseBI CCWGG 4 cut(s) 184, 342, 386, 2025
BseCI ATCGAT 1 cut(s) 1252
BseDI CCNNGG 4 cut(s) 183, 385, 497, 1843
BseGI GGATG 3 cut(s) 57, 319, 395
BseJI GATNNNNATC 1 cut(s) 2651
BseLI CCNNNNNNNGG 6 cut(s) 341, 503, 780, 1088, 2624, 2737
BseMII CTCAG 6 cut(s) 264, 1094, 1193, 2151, 2357, 2747
BseRI GAGGAG 1 cut(s) 1723
BseSI GKGCMC 2 cut(s) 1941, 2305
BseXI GCAGC 2 cut(s) 213, 2495
BseYI CCCAGC 2 cut(s) 61, 844
BsgI GTGCAG 2 cut(s) 315, 1804
BshFI GGCC 7 cut(s) 123, 716, 1003, 1794, 1972, 2051, 2518
BshVI ATCGAT 1 cut(s) 1252
BsiHKAI GWGCWC 4 cut(s) 821, 1688, 2305, 2464
BsiSI CCGG 2 cut(s) 618, 2237
BslFI GGGAC 2 cut(s) 1324, 2601
BslI CCNNNNNNNGG 6 cut(s) 341, 503, 780, 1088, 2624, 2737
BsmAI GTCTC 4 cut(s) 272, 386, 2758, 2788
BsmBI CGTCTC 1 cut(s) 2788
BsmFI GGGAC 2 cut(s) 1324, 2601
BsmI GAATGC 2 cut(s) 166, 2411
BsnI GGCC 7 cut(s) 123, 716, 1003, 1794, 1972, 2051, 2518
Bsp119I TTCGAA 3 cut(s) 240, 1981, 2493
Bsp1286I GDGCHC 5 cut(s) 821, 1688, 1941, 2305, 2464
Bsp1407I TGTACA 1 cut(s) 2776
Bsp1720I GCTNAGC 1 cut(s) 1202
BspACI CCGC 3 cut(s) 1918, 2370, 2457
BspANI GGCC 7 cut(s) 123, 716, 1003, 1794, 1972, 2051, 2518
BspCNI CTCAG 6 cut(s) 263, 1095, 1194, 2152, 2358, 2746
BspDI ATCGAT 1 cut(s) 1252
BspLI GGNNCC 4 cut(s) 481, 518, 715, 2517
BspMAI CTGCAG 1 cut(s) 203
BspMI ACCTGC 2 cut(s) 206, 528
BspPI GGATC 3 cut(s) 514, 1592, 2236
BspT104I TTCGAA 3 cut(s) 240, 1981, 2493
BsrBI CCGCTC 1 cut(s) 2370
BsrGI TGTACA 1 cut(s) 2776
BssECI CCNNGG 4 cut(s) 183, 385, 497, 1843
BssNI GRCGYC 1 cut(s) 1211
BssSI CACGAG 1 cut(s) 125
BssT1I CCWWGG 2 cut(s) 497, 1843
Bst2BI CACGAG 1 cut(s) 125
Bst2UI CCWGG 4 cut(s) 184, 342, 386, 2025
Bst4CI ACNGT 1 cut(s) 1614
Bst6I CTCTTC 4 cut(s) 275, 516, 2023, 2195
BstACI GRCGYC 1 cut(s) 1211
BstAPI GCANNNNNTGC 1 cut(s) 198
BstAUI TGTACA 1 cut(s) 2776
BstBI TTCGAA 3 cut(s) 240, 1981, 2493
BstC8I GCNNGC 5 cut(s) 607, 1028, 1688, 1692, 2049
BstEII GGTNACC 1 cut(s) 2143
BstF5I GGATG 3 cut(s) 57, 319, 395
BstMAI GTCTC 4 cut(s) 272, 386, 2758, 2788
BstMWI GCNNNNNNNGC 1 cut(s) 198
BstNI CCWGG 4 cut(s) 184, 342, 386, 2025
BstNSI RCATGY 4 cut(s) 218, 2637, 2716, 2771
BstPI GGTNACC 1 cut(s) 2143
BstSCI CCNGG 4 cut(s) 182, 340, 384, 2023
BstSFI CTRYAG 1 cut(s) 199
BstSLI GKGCMC 2 cut(s) 1941, 2305
BstV1I GCAGC 2 cut(s) 213, 2495
BstV2I GAAGAC 2 cut(s) 875, 933
BstX2I RGATCY 4 cut(s) 420, 506, 889, 1048
BstXI CCANNNNNNTGG 2 cut(s) 724, 1295
BstYI RGATCY 4 cut(s) 420, 506, 889, 1048
Bsu15I ATCGAT 1 cut(s) 1252
BsuI GTATCC 1 cut(s) 2442
BsuRI GGCC 7 cut(s) 123, 716, 1003, 1794, 1972, 2051, 2518
BsuTUI ATCGAT 1 cut(s) 1252
BtsCI GGATG 3 cut(s) 57, 319, 395
BtsIMutI CAGTG 6 cut(s) 83, 715, 778, 1673, 1780, 2381
BveI ACCTGC 2 cut(s) 206, 528
Cac8I GCNNGC 5 cut(s) 607, 1028, 1688, 1692, 2049
Cfr13I GGNCC 8 cut(s) 620, 714, 914, 1001, 1273, 1920, 2347, 2516
ClaI ATCGAT 1 cut(s) 1252
CpoI CGGWCCG 1 cut(s) 620
CseI GACGC 2 cut(s) 611, 1200
Csp6I GTAC 6 cut(s) 168, 762, 1521, 1697, 1976, 2777
CspCI CAANNNNNGTGG 2 cut(s) 1993, 2028
CspI CGGWCCG 1 cut(s) 620
CviQI GTAC 6 cut(s) 168, 762, 1521, 1697, 1976, 2777
DraI TTTAAA 2 cut(s) 1758, 1839
EaeI YGGCCR 1 cut(s) 1970
Eam1104I CTCTTC 4 cut(s) 275, 516, 2023, 2195
EarI CTCTTC 4 cut(s) 275, 516, 2023, 2195
Ecl136II GAGCTC 2 cut(s) 819, 1686
Eco130I CCWWGG 2 cut(s) 497, 1843
Eco147I AGGCCT 1 cut(s) 123
Eco24I GRGCYC 2 cut(s) 821, 1688
Eco47I GGWCC 5 cut(s) 620, 914, 1273, 1920, 2347
Eco53kI GAGCTC 2 cut(s) 819, 1686
Eco91I GGTNACC 1 cut(s) 2143
EcoICRI GAGCTC 2 cut(s) 819, 1686
EcoO109I RGGNCCY 1 cut(s) 2516
EcoO65I GGTNACC 1 cut(s) 2143
EcoRI GAATTC 2 cut(s) 491, 1736
EcoRII CCWGG 4 cut(s) 182, 340, 384, 2023
EcoT14I CCWWGG 2 cut(s) 497, 1843
EcoT38I GRGCYC 2 cut(s) 821, 1688
ErhI CCWWGG 2 cut(s) 497, 1843
Esp3I CGTCTC 1 cut(s) 2788
FalI AAGNNNNNCTT 2 cut(s) 1190, 1222
FaqI GGGAC 2 cut(s) 1324, 2601
FbaI TGATCA 1 cut(s) 33
FblI GTMKAC 1 cut(s) 1093
Fnu4HI GCNGC 2 cut(s) 202, 2484
FokI GGATG 3 cut(s) 44, 326, 402
FriOI GRGCYC 2 cut(s) 821, 1688
Fsp4HI GCNGC 2 cut(s) 202, 2484
GluI GCNGC 2 cut(s) 202, 2484
GsaI CCCAGC 2 cut(s) 65, 848
GsuI CTGGAG 4 cut(s) 368, 802, 2133, 2405
HaeIII GGCC 7 cut(s) 123, 716, 1003, 1794, 1972, 2051, 2518
HapII CCGG 2 cut(s) 618, 2237
HgaI GACGC 2 cut(s) 611, 1200
Hin1I GRCGYC 1 cut(s) 1211
HindIII AAGCTT 2 cut(s) 146, 235
HpaII CCGG 2 cut(s) 618, 2237
HphI GGTGA 7 cut(s) 187, 607, 1602, 2081, 2185, 2185, 2544
Hpy166II GTNNAC 5 cut(s) 588, 615, 1094, 1816, 2303
Hpy188I TCNGA 6 cut(s) 516, 1117, 1282, 1857, 2161, 2784
Hpy8I GTNNAC 5 cut(s) 588, 615, 1094, 1816, 2303
HpyAV CCTTC 8 cut(s) 444, 683, 992, 1427, 2105, 2489, 2500, 2561
HpyCH4III ACNGT 1 cut(s) 1614
HpyCH4IV ACGT 2 cut(s) 1898, 2797
HpyF10VI GCNNNNNNNGC 1 cut(s) 198
HpySE526I ACGT 2 cut(s) 1898, 2797
Hsp92I GRCGYC 1 cut(s) 1211
Ksp22I TGATCA 1 cut(s) 33
LmnI GCTCC 3 cut(s) 2114, 2167, 2386
Lsp1109I GCAGC 2 cut(s) 213, 2495
LweI GCATC 7 cut(s) 201, 380, 532, 615, 857, 2062, 2470
MaeII ACGT 2 cut(s) 1898, 2797
MaeIII GTNAC 6 cut(s) 429, 2090, 2143, 2321, 2498, 2658
MbiI CCGCTC 1 cut(s) 2370
MfeI CAATTG 2 cut(s) 653, 2435
MflI RGATCY 4 cut(s) 420, 506, 889, 1048
MhlI GDGCHC 5 cut(s) 821, 1688, 1941, 2305, 2464
MlsI TGGCCA 1 cut(s) 1972
MluNI TGGCCA 1 cut(s) 1972
MlyI GAGTC 3 cut(s) 388, 1346, 2348
MmeI TCCRAC 3 cut(s) 291, 666, 2307
Mox20I TGGCCA 1 cut(s) 1972
MroXI GAANNNNTTC 4 cut(s) 1111, 1499, 1555, 1869
MscI TGGCCA 1 cut(s) 1972
MslI CAYNNNNRTG 2 cut(s) 1873, 2772
Msp20I TGGCCA 1 cut(s) 1972
MspA1I CMGCKG 2 cut(s) 1102, 2737
MspI CCGG 2 cut(s) 618, 2237
MspR9I CCNGG 4 cut(s) 184, 342, 386, 2025
MunI CAATTG 2 cut(s) 653, 2435
Mva1269I GAATGC 2 cut(s) 166, 2411
MvaI CCWGG 4 cut(s) 184, 342, 386, 2025
MwoI GCNNNNNNNGC 1 cut(s) 198
NlaIV GGNNCC 4 cut(s) 481, 518, 715, 2517
NmuCI GTSAC 1 cut(s) 2658
NspI RCATGY 4 cut(s) 218, 2637, 2716, 2771
NspV TTCGAA 3 cut(s) 240, 1981, 2493
PaqCI CACCTGC 1 cut(s) 206
PceI AGGCCT 1 cut(s) 123
PciI ACATGT 2 cut(s) 2633, 2767
PctI GAATGC 2 cut(s) 166, 2411
PdmI GAANNNNTTC 4 cut(s) 1111, 1499, 1555, 1869
PfeI GAWTC 7 cut(s) 345, 1249, 1367, 1551, 1595, 1660, 2419
PflMI CCANNNNNTGG 2 cut(s) 503, 780
PfoI TCCNGGA 1 cut(s) 340
PkrI GCNGC 2 cut(s) 203, 2485
PleI GAGTC 3 cut(s) 387, 1345, 2347
PpsI GAGTC 3 cut(s) 387, 1345, 2347
PscI ACATGT 2 cut(s) 2633, 2767
PshBI ATTAAT 1 cut(s) 768
Psp124BI GAGCTC 2 cut(s) 821, 1688
Psp6I CCWGG 4 cut(s) 182, 340, 384, 2023
PspEI GGTNACC 1 cut(s) 2143
PspFI CCCAGC 2 cut(s) 61, 844
PspGI CCWGG 4 cut(s) 182, 340, 384, 2023
PspN4I GGNNCC 4 cut(s) 481, 518, 715, 2517
PspPI GGNCC 8 cut(s) 620, 714, 914, 1001, 1273, 1920, 2347, 2516
PstI CTGCAG 1 cut(s) 203
PsuI RGATCY 4 cut(s) 420, 506, 889, 1048
PvuII CAGCTG 2 cut(s) 1102, 2737
RsaI GTAC 6 cut(s) 169, 763, 1522, 1698, 1977, 2778
RsaNI GTAC 6 cut(s) 168, 762, 1521, 1697, 1976, 2777
RseI CAYNNNNRTG 2 cut(s) 1873, 2772
Rsr2I CGGWCCG 1 cut(s) 620
RsrII CGGWCCG 1 cut(s) 620
SacI GAGCTC 2 cut(s) 821, 1688
SatI GCNGC 2 cut(s) 202, 2484
Sau96I GGNCC 8 cut(s) 620, 714, 914, 1001, 1273, 1920, 2347, 2516
ScaI AGTACT 3 cut(s) 169, 1698, 1977
SchI GAGTC 3 cut(s) 388, 1346, 2348
ScrFI CCNGG 4 cut(s) 184, 342, 386, 2025
SduI GDGCHC 5 cut(s) 821, 1688, 1941, 2305, 2464
SfaNI GCATC 7 cut(s) 201, 380, 532, 615, 857, 2062, 2470
SfcI CTRYAG 1 cut(s) 199
SfuI TTCGAA 3 cut(s) 240, 1981, 2493
SinI GGWCC 5 cut(s) 620, 914, 1273, 1920, 2347
SmiMI CAYNNNNRTG 2 cut(s) 1873, 2772
SmlI CTYRAG 4 cut(s) 376, 1243, 1334, 2326
SmoI CTYRAG 4 cut(s) 376, 1243, 1334, 2326
SpeI ACTAGT 1 cut(s) 2060
SseBI AGGCCT 1 cut(s) 123
SsiI CCGC 3 cut(s) 1918, 2370, 2457
SstI GAGCTC 2 cut(s) 821, 1688
StuI AGGCCT 1 cut(s) 123
StyD4I CCNGG 4 cut(s) 182, 340, 384, 2023
StyI CCWWGG 2 cut(s) 497, 1843
TaaI ACNGT 1 cut(s) 1614
TaiI ACGT 2 cut(s) 1901, 2800
TaqI TCGA 7 cut(s) 240, 668, 1252, 1981, 2198, 2354, 2493
TaqII GACCGA 1 cut(s) 637
TatI WGTACW 4 cut(s) 167, 1696, 1975, 2776
TfiI GAWTC 7 cut(s) 345, 1249, 1367, 1551, 1595, 1660, 2419
TscAI CASTG 6 cut(s) 83, 715, 785, 1673, 1780, 2388
TseFI GTSAC 1 cut(s) 2658
TseI GCWGC 2 cut(s) 201, 2483
Tsp45I GTSAC 1 cut(s) 2658
TspGWI ACGGA 3 cut(s) 289, 690, 2241
TspRI CASTG 6 cut(s) 83, 715, 785, 1673, 1780, 2388
Van91I CCANNNNNTGG 2 cut(s) 503, 780
VneI GTGCAC 1 cut(s) 2301
VpaK11BI GGWCC 5 cut(s) 620, 914, 1273, 1920, 2347
VspI ATTAAT 1 cut(s) 768
XapI RAATTY 7 cut(s) 491, 539, 559, 1450, 1736, 1928, 2581
XbaI TCTAGA 5 cut(s) 886, 994, 1045, 1402, 1480
XceI RCATGY 4 cut(s) 218, 2637, 2716, 2771
XmiI GTMKAC 1 cut(s) 1093
XmnI GAANNNNTTC 4 cut(s) 1111, 1499, 1555, 1869
ZrmI AGTACT 3 cut(s) 169, 1698, 1977
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.