RchiOBHm_Chr0c39g0503261

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_chinensis
Unknown
OG0000047
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2238 bp
ATGCAAACTTCGCTACATTTCTTCCTTTTCTTCATCACACTCTGGGTCAGTATCATCATCCCAGCAGTTCAGAGTCAGTGTATTAAAGACGAGCAATTATCATTGCTCCAATTCAAGAAAAGCCTCGTGTTCAATCATTCCACCAAGCTTGTTTCTTGGAATGCAAGTACTGATTGTTGTTCGTGGGTCGGCGTCACTTGCAGCCGTAATGGGCGTGTTCTGGTTCTTGATATAAGCAGCGAACAGATCTCAGCTGGAATTGACAGTTCCAGCAGTCTCTTCCAGCTCCATTTCCTTCAGAGCCTCAATCTGGCGGACAACCAACTTGGTGCATCCATTCCAACTGCGATCGGAAAGCTCTTGAACTTGAGGTTGGTAGTTCTTGATCTTTCCAGTGATTATGAGTACTTAAAACTTGGAAGTCCAAATTTACACAGGTTGGTTCACAACTTCACAGAGCTTAGAGAGTTATATCTTGATGCTGTCCAAATATCAGAACAGGGGAATGAGTGGTGCCGAGCCATATCGTCTTCCCTTCCCAACCTCAGGGTCTTGAGCATGTCCGCTTGTGATCTTTCAGGCCCTTTTCACGAGTCCCTTGCTAAGCTTCAGTCTCTATCTGTAATTAGGTTGAAATGGAACTATATCTCTGCGCCAGTTCCAGGATTCTTTGCCGACTTTTCAAATTTAACTGTCTTGGATCTCTTTGGTTGCTCGTTGCATGGAACATTTCCCAAAGATATCTTTCAATTACCTTCTCTACTACGTATTGACCTTTCAACTAATGGCCAACTTAAGGGCTCCTTGCCACAATTCCCAAACAATGGATCTCTTCAGTACTTGGACCTGAGCGGGACAAAATTTTCAGGGTTATTACCAAATTCTATCGGCAACCTCAAAATGTTGTCCACCATCTCTATTCAAGATTGCAATTTCAACGGACCGGTCCCCAAGTCAATGACAAACCTTACACAATTGGTTTATTTGAGAATGGCTAACAACAAGTTGGAAGGTTCGGTTCCGTCATTCAGTATGGCCAAGAATGCTATCAACATAGACATTTCCTACAATGGTTTAACAGGTACTATAGATTCCACCCACTGGAGAAACCTTACTAAGCTATCTCGTCTCAGTTTGAGCTCTAATAAGCTCGATGGGGATGTCCCAGCATCTTTGTTTTCTCTTCCCCTATTGTGTGATCTAGATCTTTCTAGCAATCAATTTTCTGGTCCAGTCCCTGAAATTTTAAATGTGTCTTCCTACTTGCTGAATGGTCCTGATCTTGAACTTGATTTGAGTAGCAACAATCTCGAAGGGCCACTGCCTATGTCTATCTTTAGCTTGCGAGGTCTTAAGACTCTAAATCTTTCTTCAAATAATTTAAGTGGCTCGTTTCCTCTTGATGATCTACACCAGCTGAGAAATCAATCTAACTTGCAAACATTGGACCTTTCAGATACCCAGATAAATGGCAAGGTACCCAACTGGATTTGGAGTTTTAGTAATCTTAGGTACCTAGATCTTTCTTGCAACTCCCTAGATTCTCTAGAATTTCATTCAATCAATCTCACTAATCTATATTACCTTGACCTTCATTCCAATCGGTTTCATGGCCAAATCCCAATTTTTGAACCACCTTGCAATGTCCATTATCTAGATTTCTCAAAGAATTATTACAGCTCTATCATACCGAGTACCATTGGAGATGTGTTTCTTAACGTTGAATTCTTGTTGCTTTCGAGCAATAACCTCAATGGGATCATTCCAGAATCATTATGCAATCCACAAAGTCTTAAGATTCTTGATCTGTCCAATAATTCTTTGAGTGGCACGGTTCCCCGGTGCTTGAGCATGCTTGTAGTACTCAATGTAAGGAGAAACAATCTTACATATGTTGATGAATTCTCTGAAAATTGCGGTTTAGAAACGCTAGACATCAGCGGAAATCAGATTCAAGGCCAGTTTTTAAAATCTCTTGTCAACTGCACCCAGTTAGAGATTTTAAACCTTGGAAACAATCTGATAACAGAACAATTTCCATGCTTTTTGAGGAAGACATCCACCTTGAGAGTCCTTATCTTGCGATCCAATAAATTTTATGGGCGCATTGCATGTCAGAAAACTAATGGCACTTGGCCTGTACTTCAGATCATAGATCTAGCTCACAACAATTTTAGTGGTGAAGTACCAGCTGGAACAACTTTGACAACTTGGCAAGCCATGAGGACTAGAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

745

Amino Acids

82.84

Weight (kDa)

6.07

Isoelectric Point (pI)

36.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 68 1e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 277 - 335 8.4e-09 Leucine-rich repeat region
LRR_8 PF13855 351 - 408 2.5e-06 Leucine rich repeat
LRR_8 PF13855 477 - 536 1.9e-06 Leucine rich repeat
LRR_4 PF12799 478 - 517 2.3e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 1477, 1512
AccB1I GGYRCC 3 cut(s) 513, 1477, 1512
AccB7I CCANNNNNTGG 2 cut(s) 824, 1101
AccBSI CCGCTC 1 cut(s) 852
AciI CCGC 5 cut(s) 314, 564, 852, 1917, 1941
AclI AACGTT 1 cut(s) 1719
AclWI GGATC 4 cut(s) 708, 835, 1766, 2079
AcoI YGGCCR 3 cut(s) 787, 1035, 1612
AcsI RAATTY 9 cut(s) 427, 685, 860, 880, 1242, 1550, 1724, 1901, 2093
AcuI CTGAAG 4 cut(s) 281, 593, 818, 2129
AcyI GRCGYC 1 cut(s) 192
AfiI CCNNNNNNNGG 6 cut(s) 310, 546, 662, 796, 824, 1101
AflII CTTAAG 3 cut(s) 794, 1352, 1793
AgeI ACCGGT 1 cut(s) 943
AjnI CCWGG 1 cut(s) 661
AjuI GAANNNNNNNTTGG 2 cut(s) 356, 388
Alw21I GWGCWC 1 cut(s) 1142
Alw26I GTCTC 3 cut(s) 281, 618, 1133
AlwI GGATC 4 cut(s) 708, 835, 1766, 2079
AlwNI CAGNNNCTG 1 cut(s) 1238
AoxI GGCC 7 cut(s) 580, 787, 1035, 1316, 1612, 1957, 2135
ApeKI GCWGC 2 cut(s) 201, 237
ApoI RAATTY 9 cut(s) 427, 685, 860, 880, 1242, 1550, 1724, 1901, 2093
AsiGI ACCGGT 1 cut(s) 943
Asp700I GAANNNNTTC 1 cut(s) 2034
Asp718I GGTACC 2 cut(s) 1477, 1512
AspLEI GCGC 2 cut(s) 655, 2106
AspS9I GGNCC 8 cut(s) 581, 844, 941, 946, 1229, 1274, 1316, 1447
AsuC2I CCSGG 1 cut(s) 1840
AsuHPI GGTGA 1 cut(s) 2192
AvaII GGWCC 6 cut(s) 844, 941, 946, 1229, 1274, 1447
AxyI CCTNAGG 1 cut(s) 545
BalI TGGCCA 3 cut(s) 789, 1037, 1614
BanI GGYRCC 3 cut(s) 513, 1477, 1512
BanII GRGCYC 2 cut(s) 803, 1142
BauI CACGAG 2 cut(s) 125, 590
BbsI GAAGAC 3 cut(s) 522, 1248, 2060
Bbv12I GWGCWC 1 cut(s) 1142
BbvI GCAGC 2 cut(s) 213, 249
BccI CCATC 2 cut(s) 920, 1148
BceAI ACGGC 1 cut(s) 189
BcgI CGANNNNNNTGC 4 cut(s) 581, 615, 1291, 1325
BciT130I CCWGG 1 cut(s) 663
BcnI CCSGG 1 cut(s) 1840
BcoDI GTCTC 3 cut(s) 281, 618, 1133
BfaI CTAG 9 cut(s) 1202, 1212, 1517, 1538, 1547, 1655, 1931, 2159, 2229
BfmI CTRYAG 1 cut(s) 1086
BfrI CTTAAG 3 cut(s) 794, 1352, 1793
BglII AGATCT 4 cut(s) 246, 1204, 1519, 2155
BisI GCNGC 2 cut(s) 202, 238
BlpI GCTNAGC 1 cut(s) 603
BlsI GCNGC 2 cut(s) 203, 239
BmcAI AGTACT 4 cut(s) 169, 407, 839, 1863
Bme1390I CCNGG 2 cut(s) 663, 1840
Bme18I GGWCC 6 cut(s) 844, 941, 946, 1229, 1274, 1447
BmgT120I GGNCC 8 cut(s) 581, 844, 941, 946, 1229, 1274, 1316, 1447
BmiI GGNNCC 7 cut(s) 515, 802, 948, 1020, 1479, 1514, 1836
BmrFI CCNGG 2 cut(s) 663, 1840
BmrI ACTGGG 1 cut(s) 1984
BmsI GCATC 3 cut(s) 341, 469, 1178
BmuI ACTGGG 1 cut(s) 1984
BpiI GAAGAC 3 cut(s) 522, 1248, 2060
BpmI CTGGAG 1 cut(s) 1123
Bpu10I CCTNAGC 1 cut(s) 848
Bpu1102I GCTNAGC 1 cut(s) 603
BpuEI CTTGAG 4 cut(s) 388, 574, 1867, 2086
BpuMI CCSGG 1 cut(s) 1840
BsaAI YACGTR 1 cut(s) 767
BsaBI GATNNNNATC 1 cut(s) 1203
BsaHI GRCGYC 1 cut(s) 192
BsaJI CCNNGG 2 cut(s) 1838, 2008
BsaWI WCCGGW 1 cut(s) 943
BsaXI ACNNNNNCTCC 2 cut(s) 1486, 1516
Bsc4I CCNNNNNNNGG 6 cut(s) 310, 546, 662, 796, 824, 1101
Bse118I RCCGGY 1 cut(s) 943
Bse1I ACTGG 7 cut(s) 393, 656, 1106, 1232, 1490, 1960, 1990
Bse21I CCTNAGG 1 cut(s) 545
Bse3DI GCAATG 3 cut(s) 101, 1648, 2106
Bse8I GATNNNNATC 1 cut(s) 1203
BseBI CCWGG 1 cut(s) 663
BseDI CCNNGG 2 cut(s) 1838, 2008
BseGI GGATG 4 cut(s) 57, 332, 1165, 2057
BseJI GATNNNNATC 1 cut(s) 1203
BseLI CCNNNNNNNGG 6 cut(s) 310, 546, 662, 796, 824, 1101
BseMI GCAATG 3 cut(s) 101, 1648, 2106
BseMII CTCAG 5 cut(s) 264, 559, 839, 1144, 1409
BseNI ACTGG 7 cut(s) 393, 656, 1106, 1232, 1490, 1960, 1990
BseXI GCAGC 2 cut(s) 213, 249
BseYI CCCAGC 2 cut(s) 61, 1165
BsgI GTGCAG 1 cut(s) 1969
Bsh1285I CGRYCG 1 cut(s) 351
BshFI GGCC 7 cut(s) 582, 789, 1037, 1318, 1614, 1959, 2137
BshNI GGYRCC 3 cut(s) 513, 1477, 1512
BshTI ACCGGT 1 cut(s) 943
BsiEI CGRYCG 1 cut(s) 351
BsiHKAI GWGCWC 1 cut(s) 1142
BsiSI CCGG 2 cut(s) 944, 1840
BslFI GGGAC 5 cut(s) 580, 868, 932, 1148, 1220
BslI CCNNNNNNNGG 6 cut(s) 310, 546, 662, 796, 824, 1101
BsmAI GTCTC 3 cut(s) 281, 618, 1133
BsmBI CGTCTC 1 cut(s) 1133
BsmFI GGGAC 5 cut(s) 580, 868, 932, 1148, 1220
BsmI GAATGC 2 cut(s) 166, 1048
BsnI GGCC 7 cut(s) 582, 789, 1037, 1318, 1614, 1959, 2137
Bsp1286I GDGCHC 2 cut(s) 803, 1142
Bsp1720I GCTNAGC 1 cut(s) 603
BspACI CCGC 5 cut(s) 314, 564, 852, 1917, 1941
BspANI GGCC 7 cut(s) 582, 789, 1037, 1318, 1614, 1959, 2137
BspCNI CTCAG 5 cut(s) 263, 558, 840, 1143, 1410
BspLI GGNNCC 7 cut(s) 515, 802, 948, 1020, 1479, 1514, 1836
BspPI GGATC 4 cut(s) 708, 835, 1766, 2079
BspT107I GGYRCC 3 cut(s) 513, 1477, 1512
BspTI CTTAAG 3 cut(s) 794, 1352, 1793
BsrBI CCGCTC 1 cut(s) 852
BsrDI GCAATG 3 cut(s) 101, 1648, 2106
BsrFI RCCGGY 1 cut(s) 943
BsrI ACTGG 7 cut(s) 393, 656, 1106, 1232, 1490, 1960, 1990
BssAI RCCGGY 1 cut(s) 943
BssECI CCNNGG 2 cut(s) 1838, 2008
BssNI GRCGYC 1 cut(s) 192
BssSI CACGAG 2 cut(s) 125, 590
BssT1I CCWWGG 1 cut(s) 2008
Bst2BI CACGAG 2 cut(s) 125, 590
Bst2UI CCWGG 1 cut(s) 663
Bst4CI ACNGT 3 cut(s) 266, 694, 1834
Bst6I CTCTTC 3 cut(s) 284, 837, 1188
BstACI GRCGYC 1 cut(s) 192
BstAFI CTTAAG 3 cut(s) 794, 1352, 1793
BstBAI YACGTR 1 cut(s) 767
BstC8I GCNNGC 3 cut(s) 1343, 1853, 2217
BstDEI CTNAG 9 cut(s) 250, 461, 545, 603, 848, 1116, 1130, 1418, 1508
BstF5I GGATG 4 cut(s) 57, 332, 1165, 2057
BstHHI GCGC 2 cut(s) 655, 2106
BstMAI GTCTC 3 cut(s) 281, 618, 1133
BstMCI CGRYCG 1 cut(s) 351
BstMWI GCNNNNNNNGC 3 cut(s) 10, 198, 1043
BstNI CCWGG 1 cut(s) 663
BstNSI RCATGY 3 cut(s) 562, 1855, 2115
BstSCI CCNGG 2 cut(s) 661, 1838
BstSFI CTRYAG 1 cut(s) 1086
BstSNI TACGTA 1 cut(s) 767
BstV1I GCAGC 2 cut(s) 213, 249
BstV2I GAAGAC 3 cut(s) 522, 1248, 2060
BstX2I RGATCY 6 cut(s) 246, 700, 827, 1204, 1519, 2155
BstXI CCANNNNNNTGG 1 cut(s) 1469
BstYI RGATCY 6 cut(s) 246, 700, 827, 1204, 1519, 2155
Bsu36I CCTNAGG 1 cut(s) 545
BsuRI GGCC 7 cut(s) 582, 789, 1037, 1318, 1614, 1959, 2137
BtsCI GGATG 4 cut(s) 57, 332, 1165, 2057
BtsI GCAGTG 1 cut(s) 1319
BtsIMutI CAGTG 4 cut(s) 83, 400, 1099, 1319
Cac8I GCNNGC 3 cut(s) 1343, 1853, 2217
CaiI CAGNNNCTG 1 cut(s) 1238
CfoI GCGC 2 cut(s) 655, 2106
Cfr10I RCCGGY 1 cut(s) 943
Cfr13I GGNCC 8 cut(s) 581, 844, 941, 946, 1229, 1274, 1316, 1447
CpoI CGGWCCG 1 cut(s) 941
CseI GACGC 1 cut(s) 181
CspAI ACCGGT 1 cut(s) 943
CspCI CAANNNNNGTGG 4 cut(s) 130, 165, 2158, 2193
CspI CGGWCCG 1 cut(s) 941
CviAII CATG 7 cut(s) 559, 722, 1610, 1852, 2040, 2112, 2221
DdeI CTNAG 9 cut(s) 250, 461, 545, 603, 848, 1116, 1130, 1418, 1508
DraI TTTAAA 3 cut(s) 1248, 1968, 2004
EaeI YGGCCR 3 cut(s) 787, 1035, 1612
Eam1104I CTCTTC 3 cut(s) 284, 837, 1188
EarI CTCTTC 3 cut(s) 284, 837, 1188
EciI GGCGGA 1 cut(s) 329
Ecl136II GAGCTC 1 cut(s) 1140
Eco105I TACGTA 1 cut(s) 767
Eco130I CCWWGG 1 cut(s) 2008
Eco24I GRGCYC 2 cut(s) 803, 1142
Eco32I GATATC 1 cut(s) 742
Eco47I GGWCC 6 cut(s) 844, 941, 946, 1229, 1274, 1447
Eco53kI GAGCTC 1 cut(s) 1140
Eco57I CTGAAG 4 cut(s) 281, 593, 818, 2129
Eco81I CCTNAGG 1 cut(s) 545
EcoICRI GAGCTC 1 cut(s) 1140
EcoO109I RGGNCCY 1 cut(s) 581
EcoRI GAATTC 2 cut(s) 1724, 1901
EcoRII CCWGG 1 cut(s) 661
EcoRV GATATC 1 cut(s) 742
EcoT14I CCWWGG 1 cut(s) 2008
EcoT38I GRGCYC 2 cut(s) 803, 1142
ErhI CCWWGG 1 cut(s) 2008
Esp3I CGTCTC 1 cut(s) 1133
FaeI CATG 7 cut(s) 562, 725, 1613, 1855, 2043, 2115, 2224
FalI AAGNNNNNCTT 2 cut(s) 788, 820
FaqI GGGAC 5 cut(s) 580, 868, 932, 1148, 1220
FatI CATG 7 cut(s) 558, 721, 1609, 1851, 2039, 2111, 2220
FauI CCCGC 1 cut(s) 845
FauNDI CATATG 1 cut(s) 1891
Fnu4HI GCNGC 2 cut(s) 202, 238
FokI GGATG 4 cut(s) 44, 319, 1172, 2044
FriOI GRGCYC 2 cut(s) 803, 1142
Fsp4HI GCNGC 2 cut(s) 202, 238
FspBI CTAG 9 cut(s) 1202, 1212, 1517, 1538, 1547, 1655, 1931, 2159, 2229
GlaI GCGC 2 cut(s) 654, 2105
GluI GCNGC 2 cut(s) 202, 238
GsaI CCCAGC 2 cut(s) 65, 1169
GsuI CTGGAG 1 cut(s) 1123
HaeIII GGCC 7 cut(s) 582, 789, 1037, 1318, 1614, 1959, 2137
HapII CCGG 2 cut(s) 944, 1840
HgaI GACGC 1 cut(s) 181
HhaI GCGC 2 cut(s) 655, 2106
Hin1I GRCGYC 1 cut(s) 192
Hin1II CATG 7 cut(s) 562, 725, 1613, 1855, 2043, 2115, 2224
Hin6I GCGC 2 cut(s) 653, 2104
HinP1I GCGC 2 cut(s) 653, 2104
HincII GTYRAC 1 cut(s) 1981
HindII GTYRAC 1 cut(s) 1981
HindIII AAGCTT 2 cut(s) 146, 605
HpaII CCGG 2 cut(s) 944, 1840
HphI GGTGA 1 cut(s) 2192
Hpy166II GTNNAC 3 cut(s) 445, 909, 1981
Hpy8I GTNNAC 3 cut(s) 445, 909, 1981
HpyAV CCTTC 6 cut(s) 305, 545, 765, 1004, 1307, 1601
HpyCH4III ACNGT 3 cut(s) 266, 694, 1834
HpyCH4IV ACGT 2 cut(s) 766, 1719
HpyF10VI GCNNNNNNNGC 3 cut(s) 10, 198, 1043
HpyF3I CTNAG 9 cut(s) 250, 461, 545, 603, 848, 1116, 1130, 1418, 1508
HpySE526I ACGT 2 cut(s) 766, 1719
Hsp92I GRCGYC 1 cut(s) 192
Hsp92II CATG 7 cut(s) 562, 725, 1613, 1855, 2043, 2115, 2224
HspAI GCGC 2 cut(s) 653, 2104
KpnI GGTACC 2 cut(s) 1481, 1516
LmnI GCTCC 3 cut(s) 111, 291, 806
Lsp1109I GCAGC 2 cut(s) 213, 249
LweI GCATC 3 cut(s) 341, 469, 1178
MaeI CTAG 9 cut(s) 1202, 1212, 1517, 1538, 1547, 1655, 1931, 2159, 2229
MaeII ACGT 2 cut(s) 766, 1719
MaeIII GTNAC 1 cut(s) 193
MbiI CCGCTC 1 cut(s) 852
MboII GAAGA 9 cut(s) 13, 22, 271, 522, 824, 1175, 1248, 1362, 2065
MfeI CAATTG 1 cut(s) 974
MflI RGATCY 6 cut(s) 246, 700, 827, 1204, 1519, 2155
MhlI GDGCHC 2 cut(s) 803, 1142
MlsI TGGCCA 3 cut(s) 789, 1037, 1614
MluNI TGGCCA 3 cut(s) 789, 1037, 1614
MlyI GAGTC 4 cut(s) 82, 602, 1351, 2079
MmeI TCCRAC 2 cut(s) 365, 987
Mox20I TGGCCA 3 cut(s) 789, 1037, 1614
MroXI GAANNNNTTC 1 cut(s) 2034
MscI TGGCCA 3 cut(s) 789, 1037, 1614
Msp20I TGGCCA 3 cut(s) 789, 1037, 1614
MspA1I CMGCKG 4 cut(s) 254, 1417, 1941, 2192
MspCI CTTAAG 3 cut(s) 794, 1352, 1793
MspI CCGG 2 cut(s) 944, 1840
MspR9I CCNGG 2 cut(s) 663, 1840
MunI CAATTG 1 cut(s) 974
Mva1269I GAATGC 2 cut(s) 166, 1048
MvaI CCWGG 1 cut(s) 663
MwoI GCNNNNNNNGC 3 cut(s) 10, 198, 1043
NciI CCSGG 1 cut(s) 1840
NdeI CATATG 1 cut(s) 1891
NlaIII CATG 7 cut(s) 562, 725, 1613, 1855, 2043, 2115, 2224
NlaIV GGNNCC 7 cut(s) 515, 802, 948, 1020, 1479, 1514, 1836
NmeAIII GCCGAG 1 cut(s) 542
NmuCI GTSAC 1 cut(s) 193
NspI RCATGY 3 cut(s) 562, 1855, 2115
PaeI GCATGC 1 cut(s) 1855
PctI GAATGC 2 cut(s) 166, 1048
PdmI GAANNNNTTC 1 cut(s) 2034
PfeI GAWTC 6 cut(s) 666, 1091, 1541, 1769, 1798, 1951
PflMI CCANNNNNTGG 2 cut(s) 824, 1101
PfoI TCCNGGA 1 cut(s) 661
PinAI ACCGGT 1 cut(s) 943
PkrI GCNGC 2 cut(s) 203, 239
Ple19I CGATCG 1 cut(s) 351
PleI GAGTC 4 cut(s) 81, 601, 1351, 2078
PpsI GAGTC 4 cut(s) 81, 601, 1351, 2078
Ppu21I YACGTR 1 cut(s) 767
Psp124BI GAGCTC 1 cut(s) 1142
Psp1406I AACGTT 1 cut(s) 1719
Psp6I CCWGG 1 cut(s) 661
PspFI CCCAGC 2 cut(s) 61, 1165
PspGI CCWGG 1 cut(s) 661
PspN4I GGNNCC 7 cut(s) 515, 802, 948, 1020, 1479, 1514, 1836
PspPI GGNCC 8 cut(s) 581, 844, 941, 946, 1229, 1274, 1316, 1447
PstNI CAGNNNCTG 1 cut(s) 1238
PsuI RGATCY 6 cut(s) 246, 700, 827, 1204, 1519, 2155
PvuI CGATCG 1 cut(s) 351
PvuII CAGCTG 3 cut(s) 254, 1417, 2192
Rsr2I CGGWCCG 1 cut(s) 941
RsrII CGGWCCG 1 cut(s) 941
SacI GAGCTC 1 cut(s) 1142
SatI GCNGC 2 cut(s) 202, 238
Sau96I GGNCC 8 cut(s) 581, 844, 941, 946, 1229, 1274, 1316, 1447
ScaI AGTACT 4 cut(s) 169, 407, 839, 1863
SchI GAGTC 4 cut(s) 82, 602, 1351, 2079
ScrFI CCNGG 2 cut(s) 663, 1840
SduI GDGCHC 2 cut(s) 803, 1142
SfaNI GCATC 3 cut(s) 341, 469, 1178
SfcI CTRYAG 1 cut(s) 1086
SinI GGWCC 6 cut(s) 844, 941, 946, 1229, 1274, 1447
SmlI CTYRAG 7 cut(s) 367, 553, 794, 1352, 1793, 1846, 2065
SmoI CTYRAG 7 cut(s) 367, 553, 794, 1352, 1793, 1846, 2065
SnaBI TACGTA 1 cut(s) 767
SphI GCATGC 1 cut(s) 1855
SsiI CCGC 5 cut(s) 314, 564, 852, 1917, 1941
SspMI CTAG 9 cut(s) 1202, 1212, 1517, 1538, 1547, 1655, 1931, 2159, 2229
SstI GAGCTC 1 cut(s) 1142
StyD4I CCNGG 2 cut(s) 661, 1838
StyI CCWWGG 1 cut(s) 2008
TaaI ACNGT 3 cut(s) 266, 694, 1834
TaiI ACGT 2 cut(s) 769, 1722
TaqI TCGA 3 cut(s) 1152, 1311, 1739
TatI WGTACW 5 cut(s) 167, 405, 837, 1861, 2140
TfiI GAWTC 6 cut(s) 666, 1091, 1541, 1769, 1798, 1951
TscAI CASTG 4 cut(s) 83, 400, 1106, 1326
TseFI GTSAC 1 cut(s) 193
TseI GCWGC 2 cut(s) 201, 237
Tsp45I GTSAC 1 cut(s) 193
TspDTI ATGAA 5 cut(s) 22, 1544, 1583, 1598, 1914
TspGWI ACGGA 2 cut(s) 954, 1011
TspRI CASTG 4 cut(s) 83, 400, 1106, 1326
Van91I CCANNNNNTGG 2 cut(s) 824, 1101
Vha464I CTTAAG 3 cut(s) 794, 1352, 1793
VpaK11BI GGWCC 6 cut(s) 844, 941, 946, 1229, 1274, 1447
XapI RAATTY 9 cut(s) 427, 685, 860, 880, 1242, 1550, 1724, 1901, 2093
XbaI TCTAGA 3 cut(s) 1201, 1546, 1654
XceI RCATGY 3 cut(s) 562, 1855, 2115
XmnI GAANNNNTTC 1 cut(s) 2034
XspI CTAG 9 cut(s) 1202, 1212, 1517, 1538, 1547, 1655, 1931, 2159, 2229
ZrmI AGTACT 4 cut(s) 169, 407, 839, 1863
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.