FvH4_1g07120

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000114
Physical Location & Seq
Forward (+)
3764153 .. 3769156
5004 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g07120.t1

Sequence Viewer

Length: 1989 bp
ATGAATTTCTCTGTGCTCTTTCAGTCCTCTTTGATTCCTTTGCTTTTGATCACTTTCTTTCTGTCGATCAATTTTCAATTGAGCGTGTGTGCTGATACAGCGGAATATGGCAACTGCAGCCTACCTATTACATGCGGAAGTGTCAAAAGCAACATCTCTTACCCCTTTTGGGGAGGGAACCGACCCTATTACTGTGGCAGATCTGGGTTCGAGGTCACATGCAATGGCACTGTCCCATTGATCACCATGAGGGATATCAATTTCAGAATTCTTGACATGAAAAATATTAGTAGTACAACAAGTCCGACTGTAAAAGTTGCTAGGGACGATTACTGGGAAACTATCTGTCCCTCGACATATGTTGCCACAAACCTCAACTTATCTCTCTTCAGTTACTCTTCTGATTCCCTGAACGTGTCTTTTTGGTACAATTGCAATACAAGCATATCAGCGTTGGGTAATTCGCTTGCCTGCAACAATACCGTCACTGTTTCCTATCTCACAGCAGCAAAAGCTAATGTTATCACGATTGATCCAGTAAGTTCGGGCGCTTGTAAAGCTGCGGTTTTGGTTCCGGTATCTCAATCCAGTTCTGTGGCTCTGGACAGCGAAAAAATAGATATTGAGGCTGCCATAGATGGTGGTTTTGAATTGGATGTGCTAAATGCTGATCCTGCCCTTTGCAGCAGTTGTTTGGCATCAGGGGGAGCTTGTGGGGCAAACAGTACTGGTGCTAACGAATTCATGTGCTTTTGCCAGACTACTTCATCTTCGACACAAATATGTACTCTTTCAACGGTTCCAACTCCAGCAGGCAAAAAGGGACTTTCTGTTAATTCCTTGAAGCGGACCCTTGTAATTGCAATAGTCTCTGCAGCAGTTGGATTTCTTACAATAACTTTTGGTTATTTCTTATGGAAGAAAAAATTTGGGAGGATATCAAGAGTGAGTGGGAATACAAGTAAGGTGACTGCAGGTGGTGGGAAGAATGATACAGAACTACCACTCTTCAGTTTGAGGAGTATATTAGCTGCTACAAACAACTTCTCTGAAGGAAATAAACTTGGAGAGGGAGGATTTGGCCCTGTTTATAAGGGAATTTTGCCAGAAAATCAAGAAGCAGTGGCCATAAAGAGACTATCAAAGAAGTCTGGGCAAGGACATCATGAGTTCATGAATGAGTTGAAACTTATAGCCAAACTCCAACATACCAATCTTGCTCGTCTCTTAGGTTGCTGTATGGAAGAAGATGAACTCATATTGATCTACGAGTACATGCCAAATCGAAGTTTGGACAAATTGTTGTTTGATCCTTGTGAAAAGACAAAGTTGGATTGGGGTACACGCTTTCGAATTATACAAGGTATTGCTCAAGGAGTATTATATATTCACAAATACTCTAGATTGAAAATCATTCACAGAGATCTAAAAGCAAGTAATGTTCTGTTGGATGAAACAATGAATCCCAAAGTGTCAGACTTTGGAATGGCGAGGATTTTTGATATAAATCAAATTGAAGCAAACACCAACAAGGTTGTTGGGACATACGGCTACATGTCACCTGAATATGCATTATATGGTCATTTTTCTGAGAAATTGGATGTGTTTAGTTTTGGAGTACTATTGTTAGAGATTGTAAGCGGAAAGAAGAATGCTTTGTTTTATTATTGCGAAAATTCACAAACGCTAGCTCAATGGATATGGCAATTATGGAAAGTAGGTAGAGAAATGGAGGTAATTGACGCATCAGTAAGGGAAACTTCCCGGATTCATGAAGCTTTGAGGTGCATCCATGTCGGGCTTTTGTGTGTTCAAGAAGCTCCAGCTGATCGACCAACAATGTCATCGGTAATTCATATGCTAGAGGTCGATGAAGCTACATCACTTCCACTGTCAAAAGAACCTGCTTTTTCAACAAGTAGGATTTCAAGTCCTGTTACCACATATTCCAAAAATGTAGTCACTATTACTTTGCCAGAACCTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

663

Amino Acids

72.49

Weight (kDa)

7.05

Isoelectric Point (pI)

37.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 39 - 98 4.5e-12 Wall-associated receptor kinase galacturonan-binding
WAK_assoc PF14380 179 - 253 3.5e-12 Wall-associated receptor kinase C-terminal
Pkinase PF00069 350 - 619 1.1e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 352 - 620 1.3e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1092
AarI CACCTGC 1 cut(s) 965
Acc36I ACCTGC 2 cut(s) 965, 1912
AciI CCGC 5 cut(s) 101, 135, 563, 847, 1641
AclWI GGATC 3 cut(s) 527, 665, 1304
AcoI YGGCCR 1 cut(s) 1125
AcsI RAATTY 6 cut(s) 4, 267, 740, 926, 1098, 1675
AcuI CTGAAG 3 cut(s) 373, 994, 1071
AfaI GTAC 7 cut(s) 295, 428, 727, 787, 1274, 1342, 1620
AfiI CCNNNNNNNGG 3 cut(s) 169, 170, 846
AflIII ACRYGT 2 cut(s) 414, 1554
AluBI AGCT 9 cut(s) 515, 560, 710, 1031, 1691, 1778, 1820, 1826, 1877
AluI AGCT 9 cut(s) 515, 560, 710, 1031, 1691, 1778, 1820, 1826, 1877
Alw21I GWGCWC 1 cut(s) 18
Alw26I GTCTC 3 cut(s) 874, 1129, 1229
AlwI GGATC 3 cut(s) 527, 665, 1304
AoxI GGCC 2 cut(s) 1081, 1125
ApeKI GCWGC 7 cut(s) 117, 506, 560, 629, 684, 875, 1031
ApoI RAATTY 6 cut(s) 4, 267, 740, 926, 1098, 1675
ArsI GACNNNNNNTTYG 2 cut(s) 1944, 1976
AspLEI GCGC 1 cut(s) 551
AspS9I GGNCC 2 cut(s) 849, 1082
AsuC2I CCSGG 1 cut(s) 1765
AsuHPI GGTGA 3 cut(s) 235, 979, 1551
AsuII TTCGAA 1 cut(s) 1351
AsuNHI GCTAGC 1 cut(s) 1687
AvaII GGWCC 1 cut(s) 849
BalI TGGCCA 1 cut(s) 1127
Bbv12I GWGCWC 1 cut(s) 18
BbvI GCAGC 7 cut(s) 129, 518, 547, 616, 696, 887, 1018
BccI CCATC 1 cut(s) 632
BceAI ACGGC 1 cut(s) 1564
BcgI CGANNNNNNTGC 2 cut(s) 1777, 1811
BclI TGATCA 2 cut(s) 48, 240
BcnI CCSGG 1 cut(s) 1765
BcoDI GTCTC 3 cut(s) 874, 1129, 1229
BfaI CTAG 4 cut(s) 321, 1401, 1688, 1862
BfmI CTRYAG 3 cut(s) 115, 873, 972
BfoI RGCGCY 1 cut(s) 552
BfuAI ACCTGC 2 cut(s) 965, 1912
BglII AGATCT 2 cut(s) 200, 1423
BisI GCNGC 7 cut(s) 118, 507, 561, 630, 685, 876, 1032
BlsI GCNGC 7 cut(s) 119, 508, 562, 631, 686, 877, 1033
BmcAI AGTACT 2 cut(s) 727, 1620
Bme1390I CCNGG 1 cut(s) 1765
Bme18I GGWCC 1 cut(s) 849
BmgT120I GGNCC 2 cut(s) 849, 1082
BmiI GGNNCC 4 cut(s) 179, 573, 801, 851
BmrFI CCNGG 1 cut(s) 1765
BmrI ACTGGG 1 cut(s) 343
BmsI GCATC 3 cut(s) 707, 1754, 1797
BmtI GCTAGC 1 cut(s) 1691
BmuI ACTGGG 1 cut(s) 343
BpmI CTGGAG 2 cut(s) 792, 1806
Bpu14I TTCGAA 1 cut(s) 1351
BpuEI CTTGAG 1 cut(s) 1356
BpuMI CCSGG 1 cut(s) 1765
BsaBI GATNNNNATC 1 cut(s) 1506
BsaWI WCCGGW 1 cut(s) 574
Bsc4I CCNNNNNNNGG 3 cut(s) 169, 170, 846
Bse1I ACTGG 4 cut(s) 338, 536, 588, 733
Bse3DI GCAATG 1 cut(s) 229
Bse8I GATNNNNATC 1 cut(s) 1506
BseGI GGATG 4 cut(s) 661, 1456, 1606, 1788
BseJI GATNNNNATC 1 cut(s) 1506
BseLI CCNNNNNNNGG 3 cut(s) 169, 170, 846
BseMI GCAATG 1 cut(s) 229
BseMII CTCAG 1 cut(s) 1581
BseNI ACTGG 4 cut(s) 338, 536, 588, 733
BseRI GAGGAG 1 cut(s) 1033
BseXI GCAGC 7 cut(s) 129, 518, 547, 616, 696, 887, 1018
BshFI GGCC 2 cut(s) 1083, 1127
BsiHKAI GWGCWC 1 cut(s) 18
BsiSI CCGG 2 cut(s) 575, 1765
BslFI GGGAC 5 cut(s) 218, 333, 338, 837, 1555
BslI CCNNNNNNNGG 3 cut(s) 169, 170, 846
BsmAI GTCTC 3 cut(s) 874, 1129, 1229
BsmBI CGTCTC 1 cut(s) 1229
BsmFI GGGAC 5 cut(s) 218, 333, 338, 837, 1555
BsmI GAATGC 1 cut(s) 1657
BsnI GGCC 2 cut(s) 1083, 1127
Bsp119I TTCGAA 1 cut(s) 1351
Bsp1286I GDGCHC 1 cut(s) 18
BspACI CCGC 5 cut(s) 101, 135, 563, 847, 1641
BspANI GGCC 2 cut(s) 1083, 1127
BspCNI CTCAG 1 cut(s) 1582
BspHI TCATGA 3 cut(s) 1165, 1173, 1771
BspLI GGNNCC 4 cut(s) 179, 573, 801, 851
BspMAI CTGCAG 3 cut(s) 119, 877, 976
BspMI ACCTGC 2 cut(s) 965, 1912
BspOI GCTAGC 1 cut(s) 1691
BspPI GGATC 3 cut(s) 527, 665, 1304
BspT104I TTCGAA 1 cut(s) 1351
BsrDI GCAATG 1 cut(s) 229
BsrI ACTGG 4 cut(s) 338, 536, 588, 733
Bst4CI ACNGT 8 cut(s) 194, 232, 310, 484, 490, 725, 799, 1893
Bst6I CTCTTC 3 cut(s) 392, 403, 1013
BstBI TTCGAA 1 cut(s) 1351
BstC8I GCNNGC 4 cut(s) 468, 472, 814, 1689
BstDEI CTNAG 2 cut(s) 1228, 1590
BstF5I GGATG 4 cut(s) 661, 1456, 1606, 1788
BstH2I RGCGCY 1 cut(s) 552
BstHHI GCGC 1 cut(s) 551
BstMAI GTCTC 3 cut(s) 874, 1129, 1229
BstMWI GCNNNNNNNGC 7 cut(s) 98, 117, 441, 512, 557, 674, 716
BstNSI RCATGY 4 cut(s) 135, 222, 1279, 1558
BstSCI CCNGG 1 cut(s) 1763
BstSFI CTRYAG 3 cut(s) 115, 873, 972
BstV1I GCAGC 7 cut(s) 129, 518, 547, 616, 696, 887, 1018
BstX2I RGATCY 2 cut(s) 200, 1423
BstXI CCANNNNNNTGG 1 cut(s) 595
BstYI RGATCY 2 cut(s) 200, 1423
BsuRI GGCC 2 cut(s) 1083, 1127
BtsCI GGATG 4 cut(s) 661, 1456, 1606, 1788
BtsI GCAGTG 1 cut(s) 1128
BtsIMutI CAGTG 4 cut(s) 228, 486, 1128, 1889
BveI ACCTGC 2 cut(s) 965, 1912
Cac8I GCNNGC 4 cut(s) 468, 472, 814, 1689
CciI TCATGA 3 cut(s) 1165, 1173, 1771
CfoI GCGC 1 cut(s) 551
Cfr13I GGNCC 2 cut(s) 849, 1082
CseI GACGC 1 cut(s) 1751
Csp6I GTAC 7 cut(s) 294, 427, 726, 786, 1273, 1341, 1619
CviQI GTAC 7 cut(s) 294, 427, 726, 786, 1273, 1341, 1619
DdeI CTNAG 2 cut(s) 1228, 1590
EaeI YGGCCR 1 cut(s) 1125
Eam1104I CTCTTC 3 cut(s) 392, 403, 1013
EarI CTCTTC 3 cut(s) 392, 403, 1013
Eco32I GATATC 2 cut(s) 256, 939
Eco47I GGWCC 1 cut(s) 849
Eco57I CTGAAG 3 cut(s) 373, 994, 1071
EcoRI GAATTC 2 cut(s) 267, 740
EcoRV GATATC 2 cut(s) 256, 939
EcoT22I ATGCAT 1 cut(s) 1573
Esp3I CGTCTC 1 cut(s) 1229
FalI AAGNNNNNCTT 2 cut(s) 1744, 1776
FaqI GGGAC 5 cut(s) 218, 333, 338, 837, 1555
FauNDI CATATG 2 cut(s) 358, 1857
FbaI TGATCA 2 cut(s) 48, 240
Fnu4HI GCNGC 7 cut(s) 118, 507, 561, 630, 685, 876, 1032
FokI GGATG 4 cut(s) 668, 1463, 1613, 1775
Fsp4HI GCNGC 7 cut(s) 118, 507, 561, 630, 685, 876, 1032
FspBI CTAG 4 cut(s) 321, 1401, 1688, 1862
GlaI GCGC 1 cut(s) 550
GluI GCNGC 7 cut(s) 118, 507, 561, 630, 685, 876, 1032
GsuI CTGGAG 2 cut(s) 792, 1806
HaeII RGCGCY 1 cut(s) 552
HaeIII GGCC 2 cut(s) 1083, 1127
HapII CCGG 2 cut(s) 575, 1765
HgaI GACGC 1 cut(s) 1751
HhaI GCGC 1 cut(s) 551
Hin6I GCGC 1 cut(s) 549
HinP1I GCGC 1 cut(s) 549
HindIII AAGCTT 1 cut(s) 1776
HinfI GANTC 4 cut(s) 34, 404, 1462, 1768
HpaII CCGG 2 cut(s) 575, 1765
HphI GGTGA 3 cut(s) 235, 979, 1551
Hpy166II GTNNAC 1 cut(s) 1343
Hpy188I TCNGA 6 cut(s) 266, 306, 403, 1051, 1477, 1591
Hpy8I GTNNAC 1 cut(s) 1343
HpyAV CCTTC 1 cut(s) 1046
HpyCH4III ACNGT 8 cut(s) 194, 232, 310, 484, 490, 725, 799, 1893
HpyCH4IV ACGT 1 cut(s) 414
HpyF10VI GCNNNNNNNGC 7 cut(s) 98, 117, 441, 512, 557, 674, 716
HpyF3I CTNAG 2 cut(s) 1228, 1590
HpySE526I ACGT 1 cut(s) 414
HspAI GCGC 1 cut(s) 549
Ksp22I TGATCA 2 cut(s) 48, 240
LmnI GCTCC 2 cut(s) 707, 1825
Lsp1109I GCAGC 7 cut(s) 129, 518, 547, 616, 696, 887, 1018
LweI GCATC 3 cut(s) 707, 1754, 1797
MaeI CTAG 4 cut(s) 321, 1401, 1688, 1862
MaeII ACGT 1 cut(s) 414
MaeIII GTNAC 7 cut(s) 214, 392, 484, 967, 1557, 1936, 1960
MboII GAAGA 9 cut(s) 379, 390, 762, 931, 997, 1000, 1256, 1259, 1660
MfeI CAATTG 2 cut(s) 77, 430
MflI RGATCY 2 cut(s) 200, 1423
MhlI GDGCHC 1 cut(s) 18
MlsI TGGCCA 1 cut(s) 1127
MluNI TGGCCA 1 cut(s) 1127
MmeI TCCRAC 6 cut(s) 329, 827, 862, 1228, 1311, 1428
Mox20I TGGCCA 1 cut(s) 1127
Mph1103I ATGCAT 1 cut(s) 1573
MscI TGGCCA 1 cut(s) 1127
MseI TTAA 1 cut(s) 834
MslI CAYNNNNRTG 1 cut(s) 781
Msp20I TGGCCA 1 cut(s) 1127
MspA1I CMGCKG 2 cut(s) 101, 1826
MspI CCGG 2 cut(s) 575, 1765
MspR9I CCNGG 1 cut(s) 1765
MunI CAATTG 2 cut(s) 77, 430
Mva1269I GAATGC 1 cut(s) 1657
MwoI GCNNNNNNNGC 7 cut(s) 98, 117, 441, 512, 557, 674, 716
NciI CCSGG 1 cut(s) 1765
NdeI CATATG 2 cut(s) 358, 1857
NheI GCTAGC 1 cut(s) 1687
NlaIV GGNNCC 4 cut(s) 179, 573, 801, 851
NmuCI GTSAC 5 cut(s) 214, 484, 967, 1557, 1960
NsiI ATGCAT 1 cut(s) 1573
NspI RCATGY 4 cut(s) 135, 222, 1279, 1558
NspV TTCGAA 1 cut(s) 1351
PagI TCATGA 3 cut(s) 1165, 1173, 1771
PaqCI CACCTGC 1 cut(s) 965
PciI ACATGT 1 cut(s) 1554
PctI GAATGC 1 cut(s) 1657
PfeI GAWTC 4 cut(s) 34, 404, 1462, 1768
PfoI TCCNGGA 1 cut(s) 1763
PkrI GCNGC 7 cut(s) 119, 508, 562, 631, 686, 877, 1033
PscI ACATGT 1 cut(s) 1554
PsiI TTATAA 1 cut(s) 1092
PspN4I GGNNCC 4 cut(s) 179, 573, 801, 851
PspPI GGNCC 2 cut(s) 849, 1082
PstI CTGCAG 3 cut(s) 119, 877, 976
PsuI RGATCY 2 cut(s) 200, 1423
PvuII CAGCTG 1 cut(s) 1826
RsaI GTAC 7 cut(s) 295, 428, 727, 787, 1274, 1342, 1620
RsaNI GTAC 7 cut(s) 294, 427, 726, 786, 1273, 1341, 1619
RseI CAYNNNNRTG 1 cut(s) 781
SaqAI TTAA 1 cut(s) 834
SatI GCNGC 7 cut(s) 118, 507, 561, 630, 685, 876, 1032
Sau96I GGNCC 2 cut(s) 849, 1082
ScaI AGTACT 2 cut(s) 727, 1620
ScrFI CCNGG 1 cut(s) 1765
SduI GDGCHC 1 cut(s) 18
SfaNI GCATC 3 cut(s) 707, 1754, 1797
SfcI CTRYAG 3 cut(s) 115, 873, 972
SfuI TTCGAA 1 cut(s) 1351
SinI GGWCC 1 cut(s) 849
SmiMI CAYNNNNRTG 1 cut(s) 781
SmlI CTYRAG 1 cut(s) 1371
SmoI CTYRAG 1 cut(s) 1371
SsiI CCGC 5 cut(s) 101, 135, 563, 847, 1641
SspI AATATT 1 cut(s) 286
SspMI CTAG 4 cut(s) 321, 1401, 1688, 1862
StyD4I CCNGG 1 cut(s) 1763
TaaI ACNGT 8 cut(s) 194, 232, 310, 484, 490, 725, 799, 1893
TaiI ACGT 1 cut(s) 417
TaqI TCGA 9 cut(s) 65, 210, 353, 773, 1285, 1351, 1831, 1869, 1984
TatI WGTACW 5 cut(s) 293, 725, 785, 1272, 1618
TfiI GAWTC 4 cut(s) 34, 404, 1462, 1768
Tru1I TTAA 1 cut(s) 834
Tru9I TTAA 1 cut(s) 834
TscAI CASTG 4 cut(s) 235, 493, 1128, 1896
TseFI GTSAC 5 cut(s) 214, 484, 967, 1557, 1960
TseI GCWGC 7 cut(s) 117, 506, 560, 629, 684, 875, 1031
Tsp45I GTSAC 5 cut(s) 214, 484, 967, 1557, 1960
TspRI CASTG 4 cut(s) 235, 493, 1128, 1896
VpaK11BI GGWCC 1 cut(s) 849
XapI RAATTY 6 cut(s) 4, 267, 740, 926, 1098, 1675
XbaI TCTAGA 1 cut(s) 1400
XceI RCATGY 4 cut(s) 135, 222, 1279, 1558
XspI CTAG 4 cut(s) 321, 1401, 1688, 1862
ZrmI AGTACT 2 cut(s) 727, 1620
Zsp2I ATGCAT 1 cut(s) 1573
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.