Rw6G011220

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000114
Physical Location & Seq
Forward (+)
19684299 .. 19688950
4652 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G011220.1

Sequence Viewer

Length: 2001 bp
ATGAATTCCTTTGTGCTTTTTCAGTCCTCTTTGATTCCTCTGCTTTTGATCACTTCCTTTCTGTCGATCAATTTTCTAAGTGAGTGCGCCGATGATGCAGTGGAATATGCCAACTGCAGCCAACCTATTACCTGTGGGGGTGTCAAAAGCAACGTCTCTTATCCCTTTTGGGGAGTGAACCGAGCCGAATACTGTGGCAAATCTGGGTTCGAGGTTACATGCCAAGACGTTGCCCCATTGATCACTATGAGGAATATCAATTTCAGAATTCTTGACATGAGCAATATTCGTACTACAACAACTCCTACTGTAAAAGTTGCTAGGCAGGATTACTGGGAAGATATCTGTCCCTCGACATATGTTTCCACAACCCTCGACTTCTCTCTCTTCACTTACTCTTCTGGGCTTCTGAACGTGTCTTTTTGGTACGGATGCAATGCAACCGTAACAACCGTAACAGTCACAGGTAATTCGTATCCCTGCAACAGTAGCGTTACCGCTTCCTATCTCACACAGACGAGAGCTAGTGGTATCCCGGTTGATCCAGTTACTACGGGAGGCTGTCAATATAAGGTTTTGGTTCCGGTATTTGAATCCGCTTCTGAGGCTCTGGACAACAATGCTACAGATATTGAGACTGTGATAGATGGTGGTTTTGAATTGGATGTGCTAAATGCTGATTCTGGCCTGTGCATCAATTGCTTGGCATCAGGGGGAGTTTGTGGGCAAGACACTACTGTTGCCAACGAATTCATGTGCTTTTGCCAGACGAATCCATCTTCGACAACCACAAAGCAAACCATTGTAATCGCAACAGTCTCAGCAACAGCAGGGTTGCTTGCTATAGTTTTTGGCTATTTTTTATGGAAGAAAACACTGGGAAAGAGAAGACATATTCTAGTAATCAAAACAAACACTGAACTATCAATATTTTGGATCTTTAGTGAAACTATAAAGTATCTTAGTGCTGCTGGTGTGGAGAATGATACAGAACTACCACTATTCAGTTTGAGGAGTATATTAGTAGCTACTAATAACTTCTCTGAAGCGAATAAACTAGGAGAGGGAGGATTCGGCCCTGTTTATAAGGGGATTTTGCCTGAAAATCAAGAAGTAGCCATAAAAAGGCTATCAAAGAAGTCCGGACAAGGACAACAGGAGTTCATGAATGAGTTAAAGCTTATAGCGAAGCTCCAACATACCAACCTTGTTAGACTCTTGGGTTGCTGCACTGAAGCAGAGGAAATGATGTTGATTTATGAGTACATGCCCAATCGAAGTTTGGACAAATTTCTGTTTGATCCATCCGAAAAGACAAAATTGGACTGGGATAGGCGTTTAAGAATTATAGAAGGTACAGCTCAAGGATTGCTTTATATACACAAGTACTCAAGATTAAAAATCATTCACCGGGATCTAAAAGCAAGTAATATTCTATTGGATGGAACAATGAACCCCAAGATTTCTGACTTTGTAATGGCAAAATTTTTTGACATAAATCAAACTGAAGCAAATACAAACAGGGTTGTTGGGACCTACGGCTACATGTCACCTGAGTATGCACGTTATGGTCATTTCTCTGAGAAATCGGATGTCTTTAGTTTTGGAGTTTTGTTGTTGGAGATTGTAAGTGGAAAGAAAAATTCTAGTTTCTATCGTTTTGAACGTTCACTGACTCTCGCTGGATGGGTATGGGACCTATGGAAAGAAGGAAGGGGAATAGAGGTGATTGATGCGTCAATAAGGGAAACATTACAGGCTCATGAGTCTTTAAGGTGTATCAATATAGGACTTTTGTGCGTTCAAGAATCTGCAGCTGATCGACCTGCAATGGCGTCAGTAATTCACATGTTGCAGGGAAATGAAGCTGCCTCTCTTCCACCTACCAAAGCACCTGCCTTTTCAACACAGACGAATTTCAGTACTATTGGTCCTTCTTCTCAAACACCTACCAATTATTCAAACAATGCACTCACGATTAGTTTGCCAGAAGCTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

666

Amino Acids

73.6

Weight (kDa)

5.52

Isoelectric Point (pI)

40.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 39 - 97 3.4e-11 Wall-associated receptor kinase galacturonan-binding
WAK_assoc PF14380 184 - 256 9.7e-12 Wall-associated receptor kinase C-terminal
Pkinase PF00069 348 - 547 5e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 350 - 617 9.8e-50 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1086
AarI CACCTGC 1 cut(s) 1903
Acc36I ACCTGC 2 cut(s) 1834, 1903
AccIII TCCGGA 1 cut(s) 1142
AciI CCGC 2 cut(s) 498, 597
AclI AACGTT 1 cut(s) 1666
AclWI GGATC 4 cut(s) 536, 944, 1295, 1422
AcsI RAATTY 7 cut(s) 4, 267, 749, 1289, 1484, 1642, 1915
AcuI CTGAAG 3 cut(s) 1065, 1254, 1527
AcyI GRCGYC 1 cut(s) 1835
AfaI GTAC 6 cut(s) 292, 428, 1265, 1357, 1388, 1924
AfiI CCNNNNNNNGG 2 cut(s) 170, 1125
AflIII ACRYGT 3 cut(s) 414, 1545, 1848
AgsI TTSAA 6 cut(s) 593, 659, 1664, 1805, 1905, 1962
AluBI AGCT 8 cut(s) 524, 1028, 1180, 1192, 1361, 1817, 1868, 1994
AluI AGCT 8 cut(s) 524, 1028, 1180, 1192, 1361, 1817, 1868, 1994
Alw26I GTCTC 3 cut(s) 160, 629, 823
AlwI GGATC 4 cut(s) 536, 944, 1295, 1422
Aor13HI TCCGGA 1 cut(s) 1142
AoxI GGCC 2 cut(s) 685, 1075
ApeKI GCWGC 5 cut(s) 117, 968, 1227, 1814, 1868
ApoI RAATTY 7 cut(s) 4, 267, 749, 1289, 1484, 1642, 1915
ArsI GACNNNNNNTTYG 2 cut(s) 138, 170
AspLEI GCGC 1 cut(s) 89
AspS9I GGNCC 4 cut(s) 1076, 1533, 1696, 1931
AsuC2I CCSGG 2 cut(s) 536, 1412
AsuHPI GGTGA 3 cut(s) 1400, 1542, 1738
AvaII GGWCC 3 cut(s) 1533, 1696, 1931
BbsI GAAGAC 1 cut(s) 895
BbvI GCAGC 5 cut(s) 129, 955, 1214, 1826, 1855
BccI CCATC 5 cut(s) 641, 784, 1312, 1436, 1680
BceAI ACGGC 1 cut(s) 1555
BcgI CGANNNNNNTGC 2 cut(s) 1966, 2000
BciVI GTATCC 2 cut(s) 486, 542
BclI TGATCA 2 cut(s) 48, 240
BcnI CCSGG 2 cut(s) 536, 1412
BcoDI GTCTC 3 cut(s) 160, 629, 823
BfaI CTAG 5 cut(s) 321, 525, 899, 1058, 1647
BfmI CTRYAG 4 cut(s) 115, 624, 843, 1812
BfuAI ACCTGC 2 cut(s) 1834, 1903
BfuI GTATCC 2 cut(s) 486, 542
BisI GCNGC 5 cut(s) 118, 969, 1228, 1815, 1869
BlsI GCNGC 5 cut(s) 119, 970, 1229, 1816, 1870
BmcAI AGTACT 2 cut(s) 1388, 1924
Bme1390I CCNGG 2 cut(s) 536, 1412
Bme18I GGWCC 3 cut(s) 1533, 1696, 1931
BmgT120I GGNCC 4 cut(s) 1076, 1533, 1696, 1931
BmiI GGNNCC 3 cut(s) 582, 1534, 1697
BmrFI CCNGG 2 cut(s) 536, 1412
BmrI ACTGGG 3 cut(s) 343, 887, 1336
BmsI GCATC 5 cut(s) 85, 422, 702, 716, 1723
BmuI ACTGGG 3 cut(s) 343, 887, 1336
BpiI GAAGAC 1 cut(s) 895
BpuEI CTTGAG 2 cut(s) 1347, 1375
BpuMI CCSGG 2 cut(s) 536, 1412
BsaHI GRCGYC 1 cut(s) 1835
BsaWI WCCGGW 2 cut(s) 583, 1142
BsaXI ACNNNNNCTCC 2 cut(s) 286, 316
Bsc4I CCNNNNNNNGG 2 cut(s) 170, 1125
Bse1I ACTGG 4 cut(s) 338, 545, 882, 1331
Bse3DI GCAATG 2 cut(s) 442, 1836
BseAI TCCGGA 1 cut(s) 1142
BseGI GGATG 6 cut(s) 437, 670, 1304, 1447, 1597, 1691
BseLI CCNNNNNNNGG 2 cut(s) 170, 1125
BseMI GCAATG 2 cut(s) 442, 1836
BseMII CTCAG 4 cut(s) 594, 834, 1545, 1572
BseNI ACTGG 4 cut(s) 338, 545, 882, 1331
BseRI GAGGAG 1 cut(s) 1027
BseXI GCAGC 5 cut(s) 129, 955, 1214, 1826, 1855
BsgI GTGCAG 1 cut(s) 1213
BshFI GGCC 2 cut(s) 687, 1077
BsiSI CCGG 4 cut(s) 536, 584, 1143, 1411
BslFI GGGAC 3 cut(s) 333, 1546, 1709
BslI CCNNNNNNNGG 2 cut(s) 170, 1125
BsmAI GTCTC 3 cut(s) 160, 629, 823
BsmBI CGTCTC 1 cut(s) 160
BsmFI GGGAC 3 cut(s) 333, 1546, 1709
BsnI GGCC 2 cut(s) 687, 1077
Bsp13I TCCGGA 1 cut(s) 1142
Bsp143I GATC 8 cut(s) 48, 66, 240, 541, 936, 1300, 1414, 1819
BspACI CCGC 2 cut(s) 498, 597
BspANI GGCC 2 cut(s) 687, 1077
BspCNI CTCAG 4 cut(s) 595, 833, 1546, 1573
BspEI TCCGGA 1 cut(s) 1142
BspHI TCATGA 2 cut(s) 1164, 1762
BspLI GGNNCC 3 cut(s) 582, 1534, 1697
BspMAI CTGCAG 2 cut(s) 119, 1816
BspMI ACCTGC 2 cut(s) 1834, 1903
BspPI GGATC 4 cut(s) 536, 944, 1295, 1422
BsrDI GCAATG 2 cut(s) 442, 1836
BsrI ACTGG 4 cut(s) 338, 545, 882, 1331
BssMI GATC 8 cut(s) 48, 66, 240, 541, 936, 1300, 1414, 1819
BssNI GRCGYC 1 cut(s) 1835
Bst4CI ACNGT 9 cut(s) 194, 310, 445, 454, 460, 488, 640, 739, 817
Bst6I CTCTTC 3 cut(s) 392, 403, 1881
BstACI GRCGYC 1 cut(s) 1835
BstAPI GCANNNNNTGC 1 cut(s) 699
BstC8I GCNNGC 1 cut(s) 840
BstDEI CTNAG 6 cut(s) 77, 603, 820, 962, 1554, 1581
BstF5I GGATG 6 cut(s) 437, 670, 1304, 1447, 1597, 1691
BstHHI GCGC 1 cut(s) 89
BstKTI GATC 8 cut(s) 51, 69, 243, 544, 939, 1303, 1417, 1822
BstMAI GTCTC 3 cut(s) 160, 629, 823
BstMBI GATC 8 cut(s) 48, 66, 240, 541, 936, 1300, 1414, 1819
BstMWI GCNNNNNNNGC 4 cut(s) 95, 489, 605, 699
BstNSI RCATGY 4 cut(s) 222, 1270, 1549, 1852
BstSCI CCNGG 2 cut(s) 534, 1410
BstSFI CTRYAG 4 cut(s) 115, 624, 843, 1812
BstV1I GCAGC 5 cut(s) 129, 955, 1214, 1826, 1855
BstV2I GAAGAC 1 cut(s) 895
BstX2I RGATCY 2 cut(s) 936, 1414
BstYI RGATCY 2 cut(s) 936, 1414
BsuI GTATCC 2 cut(s) 486, 542
BsuRI GGCC 2 cut(s) 687, 1077
BtsCI GGATG 6 cut(s) 437, 670, 1304, 1447, 1597, 1691
BtsI GCAGTG 1 cut(s) 105
BtsIMutI CAGTG 5 cut(s) 105, 875, 915, 1230, 1670
BveI ACCTGC 2 cut(s) 1834, 1903
Cac8I GCNNGC 1 cut(s) 840
CciI TCATGA 2 cut(s) 1164, 1762
CfoI GCGC 1 cut(s) 89
Cfr13I GGNCC 4 cut(s) 1076, 1533, 1696, 1931
CseI GACGC 2 cut(s) 1725, 1824
Csp6I GTAC 6 cut(s) 291, 427, 1264, 1356, 1387, 1923
CviAII CATG 8 cut(s) 219, 277, 754, 1165, 1267, 1546, 1763, 1849
CviQI GTAC 6 cut(s) 291, 427, 1264, 1356, 1387, 1923
DdeI CTNAG 6 cut(s) 77, 603, 820, 962, 1554, 1581
DpnI GATC 8 cut(s) 50, 68, 242, 543, 938, 1302, 1416, 1821
DpnII GATC 8 cut(s) 48, 66, 240, 541, 936, 1300, 1414, 1819
Eam1104I CTCTTC 3 cut(s) 392, 403, 1881
EarI CTCTTC 3 cut(s) 392, 403, 1881
Eco32I GATATC 1 cut(s) 343
Eco47I GGWCC 3 cut(s) 1533, 1696, 1931
Eco57I CTGAAG 3 cut(s) 1065, 1254, 1527
EcoO109I RGGNCCY 2 cut(s) 1533, 1696
EcoRI GAATTC 3 cut(s) 4, 267, 749
EcoRV GATATC 1 cut(s) 343
Esp3I CGTCTC 1 cut(s) 160
FaeI CATG 8 cut(s) 222, 280, 757, 1168, 1270, 1549, 1766, 1852
FalI AAGNNNNNCTT 2 cut(s) 1356, 1388
FaqI GGGAC 3 cut(s) 333, 1546, 1709
FatI CATG 8 cut(s) 218, 276, 753, 1164, 1266, 1545, 1762, 1848
FauNDI CATATG 1 cut(s) 358
FbaI TGATCA 2 cut(s) 48, 240
Fnu4HI GCNGC 5 cut(s) 118, 969, 1228, 1815, 1869
FokI GGATG 6 cut(s) 444, 677, 1291, 1454, 1604, 1698
Fsp4HI GCNGC 5 cut(s) 118, 969, 1228, 1815, 1869
FspBI CTAG 5 cut(s) 321, 525, 899, 1058, 1647
GlaI GCGC 1 cut(s) 88
GluI GCNGC 5 cut(s) 118, 969, 1228, 1815, 1869
HaeIII GGCC 2 cut(s) 687, 1077
HapII CCGG 4 cut(s) 536, 584, 1143, 1411
HgaI GACGC 2 cut(s) 1725, 1824
HhaI GCGC 1 cut(s) 89
Hin1I GRCGYC 1 cut(s) 1835
Hin1II CATG 8 cut(s) 222, 280, 757, 1168, 1270, 1549, 1766, 1852
Hin6I GCGC 1 cut(s) 87
HinP1I GCGC 1 cut(s) 87
HindIII AAGCTT 1 cut(s) 1178
HinfI GANTC 9 cut(s) 34, 593, 680, 772, 1071, 1215, 1675, 1766, 1808
HpaII CCGG 4 cut(s) 536, 584, 1143, 1411
HphI GGTGA 3 cut(s) 1400, 1542, 1738
Hpy166II GTNNAC 2 cut(s) 178, 1670
Hpy188I TCNGA 8 cut(s) 266, 411, 604, 1045, 1309, 1468, 1582, 1591
Hpy188III TCNNGA 9 cut(s) 272, 611, 1109, 1143, 1165, 1392, 1763, 1805, 1975
Hpy8I GTNNAC 2 cut(s) 178, 1670
HpyAV CCTTC 4 cut(s) 1346, 1703, 1707, 1944
HpyCH4III ACNGT 9 cut(s) 194, 310, 445, 454, 460, 488, 640, 739, 817
HpyCH4IV ACGT 5 cut(s) 153, 228, 414, 1564, 1666
HpyF10VI GCNNNNNNNGC 4 cut(s) 95, 489, 605, 699
HpyF3I CTNAG 6 cut(s) 77, 603, 820, 962, 1554, 1581
HpySE526I ACGT 5 cut(s) 153, 228, 414, 1564, 1666
Hsp92I GRCGYC 1 cut(s) 1835
Hsp92II CATG 8 cut(s) 222, 280, 757, 1168, 1270, 1549, 1766, 1852
HspAI GCGC 1 cut(s) 87
Kpn2I TCCGGA 1 cut(s) 1142
Ksp22I TGATCA 2 cut(s) 48, 240
Kzo9I GATC 8 cut(s) 48, 66, 240, 541, 936, 1300, 1414, 1819
LmnI GCTCC 1 cut(s) 1197
Lsp1109I GCAGC 5 cut(s) 129, 955, 1214, 1826, 1855
LweI GCATC 5 cut(s) 85, 422, 702, 716, 1723
MaeI CTAG 5 cut(s) 321, 525, 899, 1058, 1647
MaeII ACGT 5 cut(s) 153, 228, 414, 1564, 1666
MaeIII GTNAC 7 cut(s) 214, 445, 454, 460, 493, 547, 1548
MalI GATC 8 cut(s) 50, 68, 242, 543, 938, 1302, 1416, 1821
MboI GATC 8 cut(s) 48, 66, 240, 541, 936, 1300, 1414, 1819
MboII GAAGA 8 cut(s) 350, 379, 390, 771, 880, 900, 1868, 1929
MfeI CAATTG 1 cut(s) 697
MflI RGATCY 2 cut(s) 936, 1414
MlyI GAGTC 3 cut(s) 1209, 1669, 1775
MmeI TCCRAC 2 cut(s) 1219, 1599
MroI TCCGGA 1 cut(s) 1142
MseI TTAA 4 cut(s) 1175, 1340, 1397, 1772
MspA1I CMGCKG 1 cut(s) 1817
MspI CCGG 4 cut(s) 536, 584, 1143, 1411
MspR9I CCNGG 2 cut(s) 536, 1412
MunI CAATTG 1 cut(s) 697
MwoI GCNNNNNNNGC 4 cut(s) 95, 489, 605, 699
NciI CCSGG 2 cut(s) 536, 1412
NdeI CATATG 1 cut(s) 358
NdeII GATC 8 cut(s) 48, 66, 240, 541, 936, 1300, 1414, 1819
NlaIII CATG 8 cut(s) 222, 280, 757, 1168, 1270, 1549, 1766, 1852
NlaIV GGNNCC 3 cut(s) 582, 1534, 1697
NmuCI GTSAC 2 cut(s) 460, 1548
NspI RCATGY 4 cut(s) 222, 1270, 1549, 1852
PagI TCATGA 2 cut(s) 1164, 1762
PaqCI CACCTGC 1 cut(s) 1903
PciI ACATGT 2 cut(s) 1545, 1848
PcsI WCGNNNNNNNCGW 1 cut(s) 1663
PfeI GAWTC 6 cut(s) 34, 593, 680, 772, 1071, 1808
PkrI GCNGC 5 cut(s) 119, 970, 1229, 1816, 1870
PleI GAGTC 3 cut(s) 1209, 1669, 1774
PpsI GAGTC 3 cut(s) 1209, 1669, 1774
PpuMI RGGWCCY 2 cut(s) 1533, 1696
PscI ACATGT 2 cut(s) 1545, 1848
PsiI TTATAA 1 cut(s) 1086
Psp1406I AACGTT 1 cut(s) 1666
Psp5II RGGWCCY 2 cut(s) 1533, 1696
PspN4I GGNNCC 3 cut(s) 582, 1534, 1697
PspPI GGNCC 4 cut(s) 1076, 1533, 1696, 1931
PspPPI RGGWCCY 2 cut(s) 1533, 1696
PstI CTGCAG 2 cut(s) 119, 1816
PsuI RGATCY 2 cut(s) 936, 1414
PvuII CAGCTG 1 cut(s) 1817
RsaI GTAC 6 cut(s) 292, 428, 1265, 1357, 1388, 1924
RsaNI GTAC 6 cut(s) 291, 427, 1264, 1356, 1387, 1923
SaqAI TTAA 4 cut(s) 1175, 1340, 1397, 1772
SatI GCNGC 5 cut(s) 118, 969, 1228, 1815, 1869
Sau3AI GATC 8 cut(s) 48, 66, 240, 541, 936, 1300, 1414, 1819
Sau96I GGNCC 4 cut(s) 1076, 1533, 1696, 1931
ScaI AGTACT 2 cut(s) 1388, 1924
SchI GAGTC 3 cut(s) 1209, 1669, 1775
ScrFI CCNGG 2 cut(s) 536, 1412
SfaNI GCATC 5 cut(s) 85, 422, 702, 716, 1723
SfcI CTRYAG 4 cut(s) 115, 624, 843, 1812
SinI GGWCC 3 cut(s) 1533, 1696, 1931
SmlI CTYRAG 2 cut(s) 1362, 1390
SmoI CTYRAG 2 cut(s) 1362, 1390
SsiI CCGC 2 cut(s) 498, 597
SspI AATATT 3 cut(s) 286, 930, 1432
SspMI CTAG 5 cut(s) 321, 525, 899, 1058, 1647
StyD4I CCNGG 2 cut(s) 534, 1410
TaaI ACNGT 9 cut(s) 194, 310, 445, 454, 460, 488, 640, 739, 817
TaiI ACGT 5 cut(s) 156, 231, 417, 1567, 1669
TaqI TCGA 8 cut(s) 65, 210, 353, 375, 782, 1276, 1822, 1996
TatI WGTACW 3 cut(s) 1263, 1386, 1922
TfiI GAWTC 6 cut(s) 34, 593, 680, 772, 1071, 1808
Tru1I TTAA 4 cut(s) 1175, 1340, 1397, 1772
Tru9I TTAA 4 cut(s) 1175, 1340, 1397, 1772
TscAI CASTG 5 cut(s) 105, 882, 922, 1237, 1677
TseFI GTSAC 2 cut(s) 460, 1548
TseI GCWGC 5 cut(s) 117, 968, 1227, 1814, 1868
Tsp45I GTSAC 2 cut(s) 460, 1548
TspDTI ATGAA 6 cut(s) 17, 742, 1153, 1181, 1466, 1878
TspGWI ACGGA 1 cut(s) 444
TspRI CASTG 5 cut(s) 105, 882, 922, 1237, 1677
VpaK11BI GGWCC 3 cut(s) 1533, 1696, 1931
XapI RAATTY 7 cut(s) 4, 267, 749, 1289, 1484, 1642, 1915
XceI RCATGY 4 cut(s) 222, 1270, 1549, 1852
XcmI CCANNNNNNNNNTGG 1 cut(s) 1279
XspI CTAG 5 cut(s) 321, 525, 899, 1058, 1647
ZrmI AGTACT 2 cut(s) 1388, 1924
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.