RLG00000029921

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000114
Physical Location & Seq
Reverse (-)
51348799 .. 51352004
3206 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029921

Sequence Viewer

Length: 2280 bp
ATGGGGTGGCTCTTGTGTTACCTTGTAACACTGCTTTTATCTCACATCCTCTCATTCTGTACCTGCCAAGACAAAATAGTACCAGGACAGTATATCAGTGGTAACATGACTTTGGTTTCTTCCTTTGAGACCTTTTCATTAGGCTTCTTCAATCCTGAAAATTCTACTAAATACTTCCTTGGTATACGATTCAACAAATTCCCAAATACTGCATCAGTATGGGTAGCTAATAGAGAATCTCCACTTGATTCTCCGGGTTTCTTTATGCTCAGTAGCGATGGAAATCTTGTGGTGTTGGATCAGACTAGAAAACTCGTCTGGTCAACTAATGCATCCGTATCTGCTTCTGCAATGAATCACACAACTGGATTACTAGAGGATACCGGAAACCTTGTTCTGAGCTTTGAAGAAGTCACTTTGTGGCAGAGCTTCGATCATCCCTGTGATACTATCTTGCCTGGCATGAAGATTAGCTTGAACAAAAAAACTGGCCAACAAAGGCGCCTTACATCCTGGGCTGCGCTTGATGATCCACAACCCGGAAAGTTCACCTTGGGCATAGATCCTAAAGTACCAGTTCAGGGCTTTATCTGGAAGGAAACTACTCCAATACAAAGAAGTCCTCTGTACATCGGCAAGGATATAAGAACAGCGTTTCAAAATCCAGGTGGAACCGCGTTTTTCCTTTCATACAACTTTGATGTTGATGATGTTTATCTTACTTACATTGTCTCGGATAGCTCAGTAAAATTGAGGGTCTGGTTGGATCCTACTGGGCTACAATTGCAGTTCTGGCAGAATTCTAGTAAAACGTGGTTGGAAGAAGGGAGTTCACCGCCCGTTCATAACTGTGATTTTTATGCTTATTGCGGTCCCAATAGTGCCTGTCGTAGGGGTGAACCCCTGTCATCACCATGCAAGTGTTTGACTGGTTTTACAGCCAAGTTTCCGAACCAATCGGCAGTGGGGGATTGGTCCAGTGGCTGCATTAGGGAAAAGGTATTGACATGTGGTAACGGCATACAAGGTAACTTTTCAAAGCTTGAAAAGGTGAAACTGCCGGATCATTCTGTACTGTTAAACAATAGGAGTATGAACGAGTGTGAATCTGAATGTCGGCGGAACTGTTCTTGCACAGCTTATGCTTATGTAAATGCGACAGATGGAAGTAATATTGGGACATGCTTGGCATGGTTTGGCAAATTACTGGATCTAGTCGAGAATTTCAACAACTCTAGACATGATATCTATATTCGTGTTCATGGCTCCGAACTAGGCAAAAAGGGTCTTTCTGTTAATTCCTTGAAGCGGACCCTTGTAATTGCAATAGTCTCTGCAGCAGTTGGATTGCTTACAATAACTTTTGGCTATTTCTTTTGGAAGAAAAAATTGGAAAAGAAAGAAAATCAAGAAGTGGCCATAAAGAGGCTATCAAAGAAGTCTGGGCAAGGACATAATGAGTTCAAGAATGAGTTGAAACTTATAGCCAAACTCCAACATACCAATCTTGTAAGGCTATTGGGTTGCTGTATGGAAGGAGATGAAATGATATTGATCTATGAGTACATGTCTAATCGAAGTTTGGACAAATTTTTGTTTGATCCTTTTGAAAAGACAAGGTTAGATTGGGATACACGCTTTCGAATTATACAAGGTATTGCTCAAGGAGTACTATATATTCACAAGTACTCTAGATTGAAAATCATCCACAGAGATCTCAAAGCAAGTAATGTTCTGTTGGATGGAACAATGAACCCCAAAGTGTCCGACTTTGGAATGGCGAGAATTTTTGATATAAATCAAATTGAAGCAAATACCAACAAGGTTGTTGGGACATACGGTTACATGTCTCCTGAATATGCACTCTATGGTCATTTTTCCGAGAAGTTGGATGTATTTAGCTTTGGAGTATTGTTGTTAGAGATTATAAGTGGAAAGAAGAATGCTTCTTTTTATCGTTTTGAAAATTCACTAACACTTGCTCAGTGGGTATGGGAATTATGGAAAGAAGGTAGAGGAATAGAGGTAATTGATGCGTCAATAAAGGAAACATGCCGAATTCATGAAGCTTTGAGGTGTATCCATGTAGGGCTTTTGTGTGTTCAAGAAGCTCCAGCTGATCGACCAACAATGTCATCGGTGATTCATATGCTCGAGGTTAATGAAGCTACATCACTTCCACCCTCCAAAGAACCTGGATTTTCAACATGTAGGAATTCAAGCCATGTTACCACTTATTCTAACAATGTAGTTACTATTACTTTGCCAGAACCTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

760

Amino Acids

85.39

Weight (kDa)

8.21

Isoelectric Point (pI)

39.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 73 - 172 6.1e-32 D-mannose binding lectin
S_locus_glycop PF00954 233 - 315 3e-14 S-locus glycoprotein domain
PAN_2 PF08276 343 - 405 1.8e-14 PAN-like domain
Pkinase PF00069 463 - 716 7.5e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 464 - 717 9.4e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1928
Acc36I ACCTGC 1 cut(s) 71
AccB1I GGYRCC 1 cut(s) 501
AccI GTMKAC 1 cut(s) 184
AccII CGCG 1 cut(s) 677
AciI CCGC 5 cut(s) 675, 836, 870, 1120, 1309
AclWI GGATC 8 cut(s) 306, 524, 557, 761, 774, 1071, 1218, 1595
AcoI YGGCCR 2 cut(s) 490, 1416
AcsI RAATTY 9 cut(s) 160, 197, 799, 1222, 1589, 1785, 1966, 2058, 2215
AcyI GRCGYC 1 cut(s) 502
AdeI CACNNNGTG 1 cut(s) 420
AfaI GTAC 8 cut(s) 61, 81, 573, 629, 1074, 1565, 1671, 1688
AfiI CCNNNNNNNGG 5 cut(s) 539, 581, 891, 1308, 1425
AflIII ACRYGT 4 cut(s) 1007, 1566, 1845, 2207
AjnI CCWGG 5 cut(s) 82, 457, 512, 664, 2194
AjuI GAANNNNNNNTTGG 2 cut(s) 1373, 1405
AloI GAACNNNNNNTCC 2 cut(s) 378, 410
Alw26I GTCTC 4 cut(s) 122, 736, 1336, 1854
AlwI GGATC 8 cut(s) 306, 524, 557, 761, 774, 1071, 1218, 1595
AlwNI CAGNNNCTG 1 cut(s) 984
Ama87I CYCGRG 1 cut(s) 2153
AoxI GGCC 2 cut(s) 490, 1416
ApeKI GCWGC 3 cut(s) 518, 984, 1337
ApoI RAATTY 9 cut(s) 160, 197, 799, 1222, 1589, 1785, 1966, 2058, 2215
AspLEI GCGC 2 cut(s) 504, 523
AspS9I GGNCC 3 cut(s) 872, 975, 1311
AsuC2I CCSGG 2 cut(s) 255, 540
AsuHPI GGTGA 6 cut(s) 541, 825, 903, 908, 1063, 2152
AsuII TTCGAA 1 cut(s) 1642
AvaI CYCGRG 1 cut(s) 2153
AvaII GGWCC 3 cut(s) 872, 975, 1311
BalI TGGCCA 2 cut(s) 492, 1418
BamHI GGATCC 1 cut(s) 766
BanI GGYRCC 1 cut(s) 501
BbvI GCAGC 3 cut(s) 505, 971, 1349
BccI CCATC 3 cut(s) 272, 1157, 1736
BceAI ACGGC 1 cut(s) 1033
BciT130I CCWGG 5 cut(s) 84, 459, 514, 666, 2196
BciVI GTATCC 3 cut(s) 373, 1624, 2090
BcnI CCSGG 2 cut(s) 255, 540
BcoDI GTCTC 4 cut(s) 122, 736, 1336, 1854
BfaI CTAG 7 cut(s) 306, 374, 804, 1214, 1236, 1274, 1692
BfmI CTRYAG 1 cut(s) 1335
BfoI RGCGCY 1 cut(s) 505
BfuAI ACCTGC 1 cut(s) 71
BfuI GTATCC 3 cut(s) 373, 1624, 2090
BglII AGATCT 1 cut(s) 1714
BisI GCNGC 3 cut(s) 519, 985, 1338
BlsI GCNGC 3 cut(s) 520, 986, 1339
BmcAI AGTACT 2 cut(s) 1671, 1688
Bme1390I CCNGG 7 cut(s) 84, 255, 459, 514, 540, 666, 2196
Bme18I GGWCC 3 cut(s) 872, 975, 1311
BmeT110I CYCGRG 1 cut(s) 2153
BmgT120I GGNCC 3 cut(s) 872, 975, 1311
BmiI GGNNCC 6 cut(s) 503, 673, 768, 874, 1267, 1313
BmrFI CCNGG 7 cut(s) 84, 255, 459, 514, 540, 666, 2196
BmrI ACTGGG 1 cut(s) 783
BmsI GCATC 3 cut(s) 221, 341, 2023
BmuI ACTGGG 1 cut(s) 783
BpmI CTGGAG 1 cut(s) 2097
Bpu14I TTCGAA 1 cut(s) 1642
BpuEI CTTGAG 1 cut(s) 1647
BpuMI CCSGG 2 cut(s) 255, 540
BsaBI GATNNNNATC 4 cut(s) 282, 714, 1553, 1797
BsaHI GRCGYC 1 cut(s) 502
BsaI GGTCTC 1 cut(s) 122
BsaJI CCNNGG 3 cut(s) 178, 513, 552
BsaWI WCCGGW 1 cut(s) 383
Bsc4I CCNNNNNNNGG 5 cut(s) 539, 581, 891, 1308, 1425
Bse1I ACTGG 7 cut(s) 370, 493, 575, 778, 934, 978, 1212
Bse3DI GCAATG 1 cut(s) 357
Bse8I GATNNNNATC 4 cut(s) 282, 714, 1553, 1797
BseBI CCWGG 5 cut(s) 84, 459, 514, 666, 2196
BseDI CCNNGG 3 cut(s) 178, 513, 552
BseGI GGATG 7 cut(s) 45, 332, 436, 509, 1704, 1747, 1897
BseJI GATNNNNATC 4 cut(s) 282, 714, 1553, 1797
BseLI CCNNNNNNNGG 5 cut(s) 539, 581, 891, 1308, 1425
BseMI GCAATG 1 cut(s) 357
BseMII CTCAG 4 cut(s) 283, 389, 756, 1997
BseNI ACTGG 7 cut(s) 370, 493, 575, 778, 934, 978, 1212
BseXI GCAGC 3 cut(s) 505, 971, 1349
Bsh1236I CGCG 1 cut(s) 677
BshFI GGCC 2 cut(s) 492, 1418
BshNI GGYRCC 1 cut(s) 501
BsiHKCI CYCGRG 1 cut(s) 2153
BsiSI CCGG 4 cut(s) 254, 384, 540, 1061
BslFI GGGAC 3 cut(s) 858, 1192, 1846
BslI CCNNNNNNNGG 5 cut(s) 539, 581, 891, 1308, 1425
BsmAI GTCTC 4 cut(s) 122, 736, 1336, 1854
BsmFI GGGAC 3 cut(s) 858, 1192, 1846
BsmI GAATGC 1 cut(s) 1948
BsnI GGCC 2 cut(s) 492, 1418
Bso31I GGTCTC 1 cut(s) 122
BsoBI CYCGRG 1 cut(s) 2153
Bsp119I TTCGAA 1 cut(s) 1642
Bsp1407I TGTACA 1 cut(s) 627
BspACI CCGC 5 cut(s) 675, 836, 870, 1120, 1309
BspANI GGCC 2 cut(s) 492, 1418
BspCNI CTCAG 4 cut(s) 282, 390, 755, 1996
BspFNI CGCG 1 cut(s) 677
BspHI TCATGA 1 cut(s) 2062
BspLI GGNNCC 6 cut(s) 503, 673, 768, 874, 1267, 1313
BspMAI CTGCAG 1 cut(s) 1339
BspMI ACCTGC 1 cut(s) 71
BspPI GGATC 8 cut(s) 306, 524, 557, 761, 774, 1071, 1218, 1595
BspT104I TTCGAA 1 cut(s) 1642
BspT107I GGYRCC 1 cut(s) 501
BspTNI GGTCTC 1 cut(s) 122
BsrDI GCAATG 1 cut(s) 357
BsrGI TGTACA 1 cut(s) 627
BsrI ACTGG 7 cut(s) 370, 493, 575, 778, 934, 978, 1212
BssECI CCNNGG 3 cut(s) 178, 513, 552
BssNAI GTATAC 1 cut(s) 185
BssNI GRCGYC 1 cut(s) 502
BssT1I CCWWGG 2 cut(s) 178, 552
Bst1107I GTATAC 1 cut(s) 185
Bst2UI CCWGG 5 cut(s) 84, 459, 514, 666, 2196
Bst4CI ACNGT 5 cut(s) 90, 851, 1077, 1127, 1841
BstACI GRCGYC 1 cut(s) 502
BstAUI TGTACA 1 cut(s) 627
BstBI TTCGAA 1 cut(s) 1642
BstDEI CTNAG 4 cut(s) 269, 398, 742, 1983
BstENI CCTNNNNNAGG 1 cut(s) 889
BstF5I GGATG 7 cut(s) 45, 332, 436, 509, 1704, 1747, 1897
BstFNI CGCG 1 cut(s) 677
BstH2I RGCGCY 1 cut(s) 505
BstHHI GCGC 2 cut(s) 504, 523
BstMAI GTCTC 4 cut(s) 122, 736, 1336, 1854
BstMWI GCNNNNNNNGC 2 cut(s) 784, 793
BstNI CCWGG 5 cut(s) 84, 459, 514, 666, 2196
BstNSI RCATGY 6 cut(s) 1011, 1185, 1570, 1849, 2055, 2211
BstSCI CCNGG 7 cut(s) 82, 253, 457, 512, 538, 664, 2194
BstSFI CTRYAG 1 cut(s) 1335
BstUI CGCG 1 cut(s) 677
BstV1I GCAGC 3 cut(s) 505, 971, 1349
BstX2I RGATCY 4 cut(s) 562, 766, 1210, 1714
BstYI RGATCY 4 cut(s) 562, 766, 1210, 1714
BstZ17I GTATAC 1 cut(s) 185
BsuI GTATCC 3 cut(s) 373, 1624, 2090
BsuRI GGCC 2 cut(s) 492, 1418
BtgZI GCGATG 1 cut(s) 291
BtsCI GGATG 7 cut(s) 45, 332, 436, 509, 1704, 1747, 1897
BtsI GCAGTG 2 cut(s) 29, 969
BtsIMutI CAGTG 5 cut(s) 29, 103, 969, 985, 1991
BveI ACCTGC 1 cut(s) 71
CaiI CAGNNNCTG 1 cut(s) 984
CciI TCATGA 1 cut(s) 2062
CfoI GCGC 2 cut(s) 504, 523
Cfr13I GGNCC 3 cut(s) 872, 975, 1311
CseI GACGC 1 cut(s) 2025
Csp6I GTAC 8 cut(s) 60, 80, 572, 628, 1073, 1564, 1670, 1687
CviQI GTAC 8 cut(s) 60, 80, 572, 628, 1073, 1564, 1670, 1687
DdeI CTNAG 4 cut(s) 269, 398, 742, 1983
DinI GGCGCC 1 cut(s) 503
DraIII CACNNNGTG 1 cut(s) 420
EaeI YGGCCR 2 cut(s) 490, 1416
EciI GGCGGA 1 cut(s) 1135
Eco130I CCWWGG 2 cut(s) 178, 552
Eco31I GGTCTC 1 cut(s) 122
Eco32I GATATC 1 cut(s) 1246
Eco47I GGWCC 3 cut(s) 872, 975, 1311
Eco88I CYCGRG 1 cut(s) 2153
EcoNI CCTNNNNNAGG 1 cut(s) 889
EcoRI GAATTC 3 cut(s) 799, 2058, 2215
EcoRII CCWGG 5 cut(s) 82, 457, 512, 664, 2194
EcoRV GATATC 1 cut(s) 1246
EcoT14I CCWWGG 2 cut(s) 178, 552
EcoT22I ATGCAT 1 cut(s) 334
EgeI GGCGCC 1 cut(s) 503
EheI GGCGCC 1 cut(s) 503
ErhI CCWWGG 2 cut(s) 178, 552
FalI AAGNNNNNCTT 4 cut(s) 458, 490, 536, 568
FaqI GGGAC 3 cut(s) 858, 1192, 1846
FauNDI CATATG 1 cut(s) 2148
FblI GTMKAC 1 cut(s) 184
Fnu4HI GCNGC 3 cut(s) 519, 985, 1338
FokI GGATG 7 cut(s) 32, 319, 423, 496, 1691, 1754, 1904
Fsp4HI GCNGC 3 cut(s) 519, 985, 1338
FspBI CTAG 7 cut(s) 306, 374, 804, 1214, 1236, 1274, 1692
GlaI GCGC 2 cut(s) 503, 522
GluI GCNGC 3 cut(s) 519, 985, 1338
GsuI CTGGAG 1 cut(s) 2097
HaeII RGCGCY 1 cut(s) 505
HaeIII GGCC 2 cut(s) 492, 1418
HapII CCGG 4 cut(s) 254, 384, 540, 1061
HgaI GACGC 1 cut(s) 2025
HhaI GCGC 2 cut(s) 504, 523
Hin1I GRCGYC 1 cut(s) 502
Hin6I GCGC 2 cut(s) 502, 521
HinP1I GCGC 2 cut(s) 502, 521
HincII GTYRAC 1 cut(s) 324
HindII GTYRAC 1 cut(s) 324
HindIII AAGCTT 2 cut(s) 1040, 2067
HinfI GANTC 6 cut(s) 189, 236, 248, 355, 1106, 2143
HpaII CCGG 4 cut(s) 254, 384, 540, 1061
HphI GGTGA 6 cut(s) 541, 825, 903, 908, 1063, 2152
Hpy166II GTNNAC 5 cut(s) 185, 324, 549, 833, 899
Hpy188I TCNGA 8 cut(s) 303, 399, 736, 951, 1111, 1270, 1768, 1882
Hpy8I GTNNAC 5 cut(s) 185, 324, 549, 833, 899
HpyAV CCTTC 4 cut(s) 589, 818, 1529, 2003
HpyCH4III ACNGT 5 cut(s) 90, 851, 1077, 1127, 1841
HpyCH4IV ACGT 1 cut(s) 812
HpyF10VI GCNNNNNNNGC 2 cut(s) 784, 793
HpyF3I CTNAG 4 cut(s) 269, 398, 742, 1983
HpySE526I ACGT 1 cut(s) 812
Hsp92I GRCGYC 1 cut(s) 502
HspAI GCGC 2 cut(s) 502, 521
KasI GGCGCC 1 cut(s) 501
LmnI GCTCC 2 cut(s) 1271, 2116
Lsp1109I GCAGC 3 cut(s) 505, 971, 1349
LweI GCATC 3 cut(s) 221, 341, 2023
MaeI CTAG 7 cut(s) 306, 374, 804, 1214, 1236, 1274, 1692
MaeII ACGT 1 cut(s) 812
MaeIII GTNAC 9 cut(s) 17, 25, 101, 412, 1013, 1028, 1841, 2227, 2251
MboII GAAGA 7 cut(s) 111, 139, 419, 478, 833, 1393, 1951
MfeI CAATTG 1 cut(s) 782
MflI RGATCY 4 cut(s) 562, 766, 1210, 1714
MlsI TGGCCA 2 cut(s) 492, 1418
MluNI TGGCCA 2 cut(s) 492, 1418
Mly113I GGCGCC 1 cut(s) 502
MmeI TCCRAC 8 cut(s) 276, 744, 798, 1324, 1519, 1719, 1791, 1869
Mox20I TGGCCA 2 cut(s) 492, 1418
Mph1103I ATGCAT 1 cut(s) 334
MscI TGGCCA 2 cut(s) 492, 1418
MseI TTAA 3 cut(s) 1079, 1296, 2160
MslI CAYNNNNRTG 5 cut(s) 217, 441, 849, 913, 919
Msp20I TGGCCA 2 cut(s) 492, 1418
MspA1I CMGCKG 1 cut(s) 2117
MspI CCGG 4 cut(s) 254, 384, 540, 1061
MspR9I CCNGG 7 cut(s) 84, 255, 459, 514, 540, 666, 2196
MunI CAATTG 1 cut(s) 782
Mva1269I GAATGC 1 cut(s) 1948
MvaI CCWGG 5 cut(s) 84, 459, 514, 666, 2196
MvnI CGCG 1 cut(s) 677
MwoI GCNNNNNNNGC 2 cut(s) 784, 793
NarI GGCGCC 1 cut(s) 502
NciI CCSGG 2 cut(s) 255, 540
NdeI CATATG 1 cut(s) 2148
NlaIV GGNNCC 6 cut(s) 503, 673, 768, 874, 1267, 1313
NmuCI GTSAC 1 cut(s) 412
NsiI ATGCAT 1 cut(s) 334
NspI RCATGY 6 cut(s) 1011, 1185, 1570, 1849, 2055, 2211
NspV TTCGAA 1 cut(s) 1642
PaeR7I CTCGAG 1 cut(s) 2153
PagI TCATGA 1 cut(s) 2062
PciI ACATGT 4 cut(s) 1007, 1566, 1845, 2207
PctI GAATGC 1 cut(s) 1948
PfeI GAWTC 6 cut(s) 189, 236, 248, 355, 1106, 2143
PkrI GCNGC 3 cut(s) 520, 986, 1339
PluTI GGCGCC 1 cut(s) 505
PscI ACATGT 4 cut(s) 1007, 1566, 1845, 2207
PsiI TTATAA 1 cut(s) 1928
Psp6I CCWGG 5 cut(s) 82, 457, 512, 664, 2194
PspGI CCWGG 5 cut(s) 82, 457, 512, 664, 2194
PspN4I GGNNCC 6 cut(s) 503, 673, 768, 874, 1267, 1313
PspPI GGNCC 3 cut(s) 872, 975, 1311
PspXI VCTCGAGB 1 cut(s) 2153
PstI CTGCAG 1 cut(s) 1339
PstNI CAGNNNCTG 1 cut(s) 984
PsuI RGATCY 4 cut(s) 562, 766, 1210, 1714
PvuII CAGCTG 1 cut(s) 2117
RsaI GTAC 8 cut(s) 61, 81, 573, 629, 1074, 1565, 1671, 1688
RsaNI GTAC 8 cut(s) 60, 80, 572, 628, 1073, 1564, 1670, 1687
RseI CAYNNNNRTG 5 cut(s) 217, 441, 849, 913, 919
SaqAI TTAA 3 cut(s) 1079, 1296, 2160
SatI GCNGC 3 cut(s) 519, 985, 1338
Sau96I GGNCC 3 cut(s) 872, 975, 1311
ScaI AGTACT 2 cut(s) 1671, 1688
ScrFI CCNGG 7 cut(s) 84, 255, 459, 514, 540, 666, 2196
SfaNI GCATC 3 cut(s) 221, 341, 2023
SfcI CTRYAG 1 cut(s) 1335
SfoI GGCGCC 1 cut(s) 503
Sfr274I CTCGAG 1 cut(s) 2153
SfuI TTCGAA 1 cut(s) 1642
SinI GGWCC 3 cut(s) 872, 975, 1311
SlaI CTCGAG 1 cut(s) 2153
SmiMI CAYNNNNRTG 5 cut(s) 217, 441, 849, 913, 919
SmlI CTYRAG 2 cut(s) 1662, 2153
SmoI CTYRAG 2 cut(s) 1662, 2153
SsiI CCGC 5 cut(s) 675, 836, 870, 1120, 1309
SspDI GGCGCC 1 cut(s) 501
SspI AATATT 1 cut(s) 1174
SspMI CTAG 7 cut(s) 306, 374, 804, 1214, 1236, 1274, 1692
StyD4I CCNGG 7 cut(s) 82, 253, 457, 512, 538, 664, 2194
StyI CCWWGG 2 cut(s) 178, 552
TaaI ACNGT 5 cut(s) 90, 851, 1077, 1127, 1841
TaiI ACGT 1 cut(s) 815
TaqI TCGA 7 cut(s) 432, 1218, 1576, 1642, 2122, 2154, 2275
TatI WGTACW 5 cut(s) 627, 1072, 1563, 1669, 1686
TfiI GAWTC 6 cut(s) 189, 236, 248, 355, 1106, 2143
Tru1I TTAA 3 cut(s) 1079, 1296, 2160
Tru9I TTAA 3 cut(s) 1079, 1296, 2160
TscAI CASTG 5 cut(s) 36, 103, 969, 985, 1991
TseFI GTSAC 1 cut(s) 412
TseI GCWGC 3 cut(s) 518, 984, 1337
Tsp45I GTSAC 1 cut(s) 412
TspGWI ACGGA 1 cut(s) 325
TspRI CASTG 5 cut(s) 36, 103, 969, 985, 1991
VpaK11BI GGWCC 3 cut(s) 872, 975, 1311
XagI CCTNNNNNAGG 1 cut(s) 889
XapI RAATTY 9 cut(s) 160, 197, 799, 1222, 1589, 1785, 1966, 2058, 2215
XbaI TCTAGA 2 cut(s) 1235, 1691
XceI RCATGY 6 cut(s) 1011, 1185, 1570, 1849, 2055, 2211
XhoI CTCGAG 1 cut(s) 2153
XmiI GTMKAC 1 cut(s) 184
XspI CTAG 7 cut(s) 306, 374, 804, 1214, 1236, 1274, 1692
ZrmI AGTACT 2 cut(s) 1671, 1688
Zsp2I ATGCAT 1 cut(s) 334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.