Rorug02G0489500

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000114
Physical Location & Seq
Forward (+)
61875622 .. 61877055
1434 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0489500.1

Sequence Viewer

Length: 1434 bp
ATGGAGAAACCTGCAGAGCTCGTGTTCATCCCATCCCCTGGTATAGGCCACTTGGTTTCAACACTTGAGATTGCAAAGTTCCTCCTATCTCGAGACGACCAACTCTTGATCACTGTCCTCATCATGCAGTCTCCCGCTGTTTCCAAAGGCACTGATGCTTATGTCGAGTCATTTGCAGACTCTTCTTCTCCCATATCACAGCGTATCAAGTTCATCAACCTCCCACAAGTCAATATGGACCATACGGAAGGCAGTGTCCGCAATAGCTCAATCGGTTTCGTTGAAAGTCAGCAACCCCATGTTAAAGATGCCATCACAAAACTCAGCGAGTCCAAGACTCGGCTTGCGGGGTTTGTCGTCGACATGTTCTGTACGGATATGATTGACGTGGCCGAACAATTAGGGGTTCCTAGCTACGTGTTCTTCACCTCTAGTGCCGGCGCGCTCGGGCTAATGTTCCACCTCCAAGCACTGCGCGATCAAGACGGCAAGGACTGCACTGAGTTCAAAGACTCCGACGCTGAGTTGCCCATCCCGAGTTTTGTCAATCCCTTGCCAGCTGCTAAAGTCCTACCTGGCAGGTTATTCGTGAAGGAGGGAGCGGAATCATTTCTCAACATTATGAAAAGGTTTAGAGACACCAAGGGTATTTTGGTGAACACGTTCGCAGACCTAGAATCGCATGTCCTTCATGCTCTTTCATCTGATGTCGAGATCCCTCCCGTATATCCGGTAGGACCCTTACTTAACTTGAACACCAATGAAAGTCGTGTGGATTCGAACGAGGCCAAGCAGAAGTCTGATATCTTGAAATGGCTTGATGATCAGCCTCCATTGTCTGTAGTGTTCTTGTGCTTTGGAAGCATGGGAAGCTTTGGCGAGGACCAGGTGAAAGAGATCGCCCACGCCCTAGAGCACGCGGGCCATCGGTTCTTGTGGTCCTTACGCCGGCCCCCACCCACAGGAAACATTGCTTTTCCAAGTGACTACGATGACCACACCGAAGTCTTGCCCAAAGGGTTCCTCGATCGAACAGTTGGGATTGGAAAGGTCATAGGCTGGGCCCCGCAAGTTGCCGTCTTGGCTCACCCATCTGTGGGAGGCTTTGTATCCCATTGTGGGTGGAATTCCACGCTTGAGAGTCTTTGGCACGGTGTGCCCGTCGCCACGTGGCCATTGTACGCGGAGCAACAGCTGAACGCGTTTCAGCTAGTGAAGGAATTGGAATTGGCGGTGGAAATTGATATGAGCTATAGGAGCGAGAGTCCAATTGTTGTGAGCGCAAAGGAGATAGAGAGAGGAATAAGAGAGGTGATGAAACTTGACAGTGATATAAGAAAGAGAGTGAAAGAAATGAGTGAGAAGGGCAAGAAAGCTTTGATGGATGGTGGGTCGTCATACTCTTCCTTGGGACATTTTATTGATCAGATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

477

Amino Acids

52.58

Weight (kDa)

5.3

Isoelectric Point (pI)

48.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 280 - 430 8.5e-24 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 19, 570
AccB7I CCANNNNNTGG 1 cut(s) 38
AccBSI CCGCTC 1 cut(s) 602
AccI GTMKAC 1 cut(s) 360
AccII CGCG 5 cut(s) 443, 477, 920, 1184, 1202
AciI CCGC 8 cut(s) 135, 259, 347, 602, 920, 1067, 1184, 1232
AclWI GGATC 1 cut(s) 709
AcoI YGGCCR 2 cut(s) 390, 1172
AcsI RAATTY 1 cut(s) 1126
AcvI CACGTG 1 cut(s) 1170
AdeI CACNNNGTG 1 cut(s) 1156
AfaI GTAC 2 cut(s) 373, 1181
AfiI CCNNNNNNNGG 8 cut(s) 38, 44, 339, 948, 962, 1096, 1097, 1119
AflIII ACRYGT 4 cut(s) 363, 417, 660, 1200
AgsI TTSAA 5 cut(s) 60, 284, 508, 754, 811
AjiI CACGTC 1 cut(s) 388
AjnI CCWGG 3 cut(s) 37, 574, 885
AluBI AGCT 9 cut(s) 19, 267, 414, 560, 873, 1195, 1210, 1251, 1376
AluI AGCT 9 cut(s) 19, 267, 414, 560, 873, 1195, 1210, 1251, 1376
Alw21I GWGCWC 2 cut(s) 21, 918
Alw26I GTCTC 3 cut(s) 87, 135, 630
AlwI GGATC 1 cut(s) 709
Ama87I CYCGRG 3 cut(s) 90, 446, 535
AoxI GGCC 7 cut(s) 46, 390, 786, 922, 950, 1062, 1172
ApaI GGGCCC 1 cut(s) 1066
ApeKI GCWGC 1 cut(s) 560
ApoI RAATTY 1 cut(s) 1126
Asp700I GAANNNNTTC 2 cut(s) 609, 662
AspLEI GCGC 4 cut(s) 443, 445, 477, 1283
AspS9I GGNCC 8 cut(s) 238, 737, 883, 922, 939, 951, 1062, 1063
AsuHPI GGTGA 5 cut(s) 418, 667, 901, 1079, 1324
AsuII TTCGAA 1 cut(s) 779
AvaI CYCGRG 3 cut(s) 90, 446, 535
AvaII GGWCC 4 cut(s) 238, 737, 883, 939
BaeGI GKGCMC 2 cut(s) 1066, 1161
BalI TGGCCA 1 cut(s) 1174
BanII GRGCYC 2 cut(s) 21, 1066
BauI CACGAG 1 cut(s) 20
BbrPI CACGTG 1 cut(s) 1170
Bbv12I GWGCWC 2 cut(s) 21, 918
BbvI GCAGC 1 cut(s) 547
BccI CCATC 7 cut(s) 40, 320, 539, 933, 1099, 1375, 1379
BceAI ACGGC 2 cut(s) 502, 1061
BcgI CGANNNNNNTGC 4 cut(s) 155, 189, 568, 602
BciT130I CCWGG 3 cut(s) 39, 576, 887
BciVI GTATCC 1 cut(s) 1120
BclI TGATCA 3 cut(s) 108, 823, 1423
BcoDI GTCTC 3 cut(s) 87, 135, 630
BfaI CTAG 5 cut(s) 411, 432, 674, 911, 1211
BfmI CTRYAG 3 cut(s) 12, 840, 1252
BfuAI ACCTGC 2 cut(s) 19, 570
BfuI GTATCC 1 cut(s) 1120
BglI GCCNNNNNGGC 1 cut(s) 1082
BglII AGATCT 1 cut(s) 1428
BisI GCNGC 1 cut(s) 561
BlsI GCNGC 1 cut(s) 562
Bme1390I CCNGG 3 cut(s) 39, 576, 887
Bme18I GGWCC 4 cut(s) 238, 737, 883, 939
BmeT110I CYCGRG 3 cut(s) 90, 446, 535
BmgBI CACGTC 1 cut(s) 388
BmgT120I GGNCC 8 cut(s) 238, 737, 883, 922, 939, 951, 1062, 1063
BmiI GGNNCC 6 cut(s) 408, 739, 953, 1022, 1064, 1065
BmrFI CCNGG 3 cut(s) 39, 576, 887
BmsI GCATC 2 cut(s) 145, 298
Bpu14I TTCGAA 1 cut(s) 779
BpuEI CTTGAG 2 cut(s) 86, 1157
BsaAI YACGTR 2 cut(s) 418, 1170
BsaJI CCNNGG 3 cut(s) 37, 642, 1407
BsaWI WCCGGW 1 cut(s) 730
BsaXI ACNNNNNCTCC 4 cut(s) 1092, 1122, 1249, 1279
Bsc4I CCNNNNNNNGG 8 cut(s) 38, 44, 339, 948, 962, 1096, 1097, 1119
Bse118I RCCGGY 2 cut(s) 437, 948
Bse3DI GCAATG 1 cut(s) 969
BseBI CCWGG 3 cut(s) 39, 576, 887
BseDI CCNNGG 3 cut(s) 37, 642, 1407
BseGI GGATG 4 cut(s) 27, 32, 531, 1390
BseLI CCNNNNNNNGG 8 cut(s) 38, 44, 339, 948, 962, 1096, 1097, 1119
BseMI GCAATG 1 cut(s) 969
BseMII CTCAG 3 cut(s) 337, 492, 513
BsePI GCGCGC 1 cut(s) 441
BseSI GKGCMC 2 cut(s) 1066, 1161
BseXI GCAGC 1 cut(s) 547
BseYI CCCAGC 1 cut(s) 1059
BsgI GTGCAG 1 cut(s) 481
Bsh1236I CGCG 5 cut(s) 443, 477, 920, 1184, 1202
Bsh1285I CGRYCG 1 cut(s) 1030
BshFI GGCC 7 cut(s) 48, 392, 788, 924, 952, 1064, 1174
BsiEI CGRYCG 1 cut(s) 1030
BsiHKAI GWGCWC 2 cut(s) 21, 918
BsiHKCI CYCGRG 3 cut(s) 90, 446, 535
BsiSI CCGG 3 cut(s) 438, 731, 949
BslFI GGGAC 1 cut(s) 1425
BslI CCNNNNNNNGG 8 cut(s) 38, 44, 339, 948, 962, 1096, 1097, 1119
BsmAI GTCTC 3 cut(s) 87, 135, 630
BsmBI CGTCTC 1 cut(s) 87
BsmFI GGGAC 1 cut(s) 1425
BsnI GGCC 7 cut(s) 48, 392, 788, 924, 952, 1064, 1174
BsoBI CYCGRG 3 cut(s) 90, 446, 535
Bsp119I TTCGAA 1 cut(s) 779
Bsp120I GGGCCC 1 cut(s) 1062
Bsp1286I GDGCHC 4 cut(s) 21, 918, 1066, 1161
Bsp143I GATC 8 cut(s) 108, 478, 714, 823, 897, 1027, 1423, 1428
BspACI CCGC 8 cut(s) 135, 259, 347, 602, 920, 1067, 1184, 1232
BspANI GGCC 7 cut(s) 48, 392, 788, 924, 952, 1064, 1174
BspCNI CTCAG 3 cut(s) 336, 493, 514
BspFNI CGCG 5 cut(s) 443, 477, 920, 1184, 1202
BspLI GGNNCC 6 cut(s) 408, 739, 953, 1022, 1064, 1065
BspMAI CTGCAG 1 cut(s) 16
BspMI ACCTGC 2 cut(s) 19, 570
BspPI GGATC 1 cut(s) 709
BspT104I TTCGAA 1 cut(s) 779
BsrBI CCGCTC 1 cut(s) 602
BsrDI GCAATG 1 cut(s) 969
BsrFI RCCGGY 2 cut(s) 437, 948
BssAI RCCGGY 2 cut(s) 437, 948
BssECI CCNNGG 3 cut(s) 37, 642, 1407
BssHII GCGCGC 1 cut(s) 441
BssMI GATC 8 cut(s) 108, 478, 714, 823, 897, 1027, 1423, 1428
BssSI CACGAG 1 cut(s) 20
BssT1I CCWWGG 2 cut(s) 642, 1407
Bst2BI CACGAG 1 cut(s) 20
Bst2UI CCWGG 3 cut(s) 39, 576, 887
Bst4CI ACNGT 4 cut(s) 115, 1036, 1154, 1328
Bst6I CTCTTC 2 cut(s) 187, 1408
BstAPI GCANNNNNTGC 2 cut(s) 495, 1156
BstBAI YACGTR 2 cut(s) 418, 1170
BstBI TTCGAA 1 cut(s) 779
BstC8I GCNNGC 7 cut(s) 345, 439, 443, 558, 918, 922, 950
BstDEI CTNAG 3 cut(s) 323, 501, 522
BstENI CCTNNNNNAGG 1 cut(s) 42
BstF5I GGATG 4 cut(s) 27, 32, 531, 1390
BstFNI CGCG 5 cut(s) 443, 477, 920, 1184, 1202
BstHHI GCGC 4 cut(s) 443, 445, 477, 1283
BstKTI GATC 8 cut(s) 111, 481, 717, 826, 900, 1030, 1426, 1431
BstMAI GTCTC 3 cut(s) 87, 135, 630
BstMBI GATC 8 cut(s) 108, 478, 714, 823, 897, 1027, 1423, 1428
BstMCI CGRYCG 1 cut(s) 1030
BstMWI GCNNNNNNNGC 7 cut(s) 258, 495, 861, 870, 1082, 1156, 1257
BstNI CCWGG 3 cut(s) 39, 576, 887
BstNSI RCATGY 2 cut(s) 367, 686
BstSCI CCNGG 3 cut(s) 37, 574, 885
BstSFI CTRYAG 3 cut(s) 12, 840, 1252
BstSLI GKGCMC 2 cut(s) 1066, 1161
BstUI CGCG 5 cut(s) 443, 477, 920, 1184, 1202
BstV1I GCAGC 1 cut(s) 547
BstX2I RGATCY 2 cut(s) 714, 1428
BstYI RGATCY 2 cut(s) 714, 1428
BsuI GTATCC 1 cut(s) 1120
BsuRI GGCC 7 cut(s) 48, 392, 788, 924, 952, 1064, 1174
BtrI CACGTC 1 cut(s) 388
BtsCI GGATG 4 cut(s) 27, 32, 531, 1390
BtsI GCAGTG 2 cut(s) 259, 470
BtsIMutI CAGTG 6 cut(s) 111, 150, 259, 470, 498, 1333
BveI ACCTGC 2 cut(s) 19, 570
Cac8I GCNNGC 7 cut(s) 345, 439, 443, 558, 918, 922, 950
CfoI GCGC 4 cut(s) 443, 445, 477, 1283
Cfr10I RCCGGY 2 cut(s) 437, 948
Cfr13I GGNCC 8 cut(s) 238, 737, 883, 922, 939, 951, 1062, 1063
CseI GACGC 1 cut(s) 527
CsiI ACCWGGT 1 cut(s) 885
Csp6I GTAC 2 cut(s) 372, 1180
CviAII CATG 6 cut(s) 124, 299, 364, 683, 692, 865
CviQI GTAC 2 cut(s) 372, 1180
DdeI CTNAG 3 cut(s) 323, 501, 522
DpnI GATC 8 cut(s) 110, 480, 716, 825, 899, 1029, 1425, 1430
DpnII GATC 8 cut(s) 108, 478, 714, 823, 897, 1027, 1423, 1428
DraIII CACNNNGTG 1 cut(s) 1156
EaeI YGGCCR 2 cut(s) 390, 1172
Eam1104I CTCTTC 2 cut(s) 187, 1408
EarI CTCTTC 2 cut(s) 187, 1408
Ecl136II GAGCTC 1 cut(s) 19
Eco130I CCWWGG 2 cut(s) 642, 1407
Eco24I GRGCYC 2 cut(s) 21, 1066
Eco32I GATATC 1 cut(s) 805
Eco47I GGWCC 4 cut(s) 238, 737, 883, 939
Eco53kI GAGCTC 1 cut(s) 19
Eco72I CACGTG 1 cut(s) 1170
Eco88I CYCGRG 3 cut(s) 90, 446, 535
EcoICRI GAGCTC 1 cut(s) 19
EcoNI CCTNNNNNAGG 1 cut(s) 42
EcoO109I RGGNCCY 2 cut(s) 737, 1063
EcoRI GAATTC 1 cut(s) 1126
EcoRII CCWGG 3 cut(s) 37, 574, 885
EcoRV GATATC 1 cut(s) 805
EcoT14I CCWWGG 2 cut(s) 642, 1407
EcoT38I GRGCYC 2 cut(s) 21, 1066
ErhI CCWWGG 2 cut(s) 642, 1407
Esp3I CGTCTC 1 cut(s) 87
FaeI CATG 6 cut(s) 127, 302, 367, 686, 695, 868
FaqI GGGAC 1 cut(s) 1425
FatI CATG 6 cut(s) 123, 298, 363, 682, 691, 864
FauI CCCGC 4 cut(s) 142, 340, 913, 1074
FbaI TGATCA 3 cut(s) 108, 823, 1423
FblI GTMKAC 1 cut(s) 360
Fnu4HI GCNGC 1 cut(s) 561
FokI GGATG 4 cut(s) 14, 19, 518, 1397
FriOI GRGCYC 2 cut(s) 21, 1066
Fsp4HI GCNGC 1 cut(s) 561
FspBI CTAG 5 cut(s) 411, 432, 674, 911, 1211
GlaI GCGC 4 cut(s) 442, 444, 476, 1282
GluI GCNGC 1 cut(s) 561
GsaI CCCAGC 1 cut(s) 1063
HaeIII GGCC 7 cut(s) 48, 392, 788, 924, 952, 1064, 1174
HapII CCGG 3 cut(s) 438, 731, 949
HgaI GACGC 1 cut(s) 527
HhaI GCGC 4 cut(s) 443, 445, 477, 1283
Hin1II CATG 6 cut(s) 127, 302, 367, 686, 695, 868
Hin6I GCGC 4 cut(s) 441, 443, 475, 1281
HinP1I GCGC 4 cut(s) 441, 443, 475, 1281
HincII GTYRAC 1 cut(s) 361
HindII GTYRAC 1 cut(s) 361
HindIII AAGCTT 2 cut(s) 871, 1374
HpaII CCGG 3 cut(s) 438, 731, 949
HphI GGTGA 5 cut(s) 418, 667, 901, 1079, 1324
Hpy166II GTNNAC 2 cut(s) 361, 658
Hpy188I TCNGA 4 cut(s) 517, 706, 802, 1428
Hpy188III TCNNGA 8 cut(s) 90, 92, 106, 482, 535, 589, 712, 808
Hpy8I GTNNAC 2 cut(s) 361, 658
Hpy99I CGWCG 3 cut(s) 362, 521, 1166
HpyAV CCTTC 5 cut(s) 242, 586, 698, 1210, 1357
HpyCH4III ACNGT 4 cut(s) 115, 1036, 1154, 1328
HpyCH4IV ACGT 4 cut(s) 387, 417, 662, 1169
HpyCH4V TGCA 5 cut(s) 14, 74, 127, 176, 498
HpyF10VI GCNNNNNNNGC 7 cut(s) 258, 495, 861, 870, 1082, 1156, 1257
HpyF3I CTNAG 3 cut(s) 323, 501, 522
HpySE526I ACGT 4 cut(s) 387, 417, 662, 1169
Hsp92II CATG 6 cut(s) 127, 302, 367, 686, 695, 868
HspAI GCGC 4 cut(s) 441, 443, 475, 1281
KroI GCCGGC 2 cut(s) 437, 948
KroNI GCCGGC 2 cut(s) 439, 950
Ksp22I TGATCA 3 cut(s) 108, 823, 1423
Kzo9I GATC 8 cut(s) 108, 478, 714, 823, 897, 1027, 1423, 1428
LmnI GCTCC 3 cut(s) 599, 1186, 1257
Lsp1109I GCAGC 1 cut(s) 547
LweI GCATC 2 cut(s) 145, 298
MabI ACCWGGT 1 cut(s) 885
MaeI CTAG 5 cut(s) 411, 432, 674, 911, 1211
MaeII ACGT 4 cut(s) 387, 417, 662, 1169
MaeIII GTNAC 1 cut(s) 983
MalI GATC 8 cut(s) 110, 480, 716, 825, 899, 1029, 1425, 1430
MbiI CCGCTC 1 cut(s) 602
MboI GATC 8 cut(s) 108, 478, 714, 823, 897, 1027, 1423, 1428
MboII GAAGA 4 cut(s) 174, 177, 415, 1395
MfeI CAATTG 1 cut(s) 1269
MflI RGATCY 2 cut(s) 714, 1428
MhlI GDGCHC 4 cut(s) 21, 918, 1066, 1161
MlsI TGGCCA 1 cut(s) 1174
MluCI AATT 6 cut(s) 398, 1126, 1220, 1226, 1239, 1269
MluI ACGCGT 1 cut(s) 1200
MluNI TGGCCA 1 cut(s) 1174
MlyI GAGTC 7 cut(s) 173, 176, 331, 338, 506, 1150, 1273
MmeI TCCRAC 1 cut(s) 540
Mox20I TGGCCA 1 cut(s) 1174
MroNI GCCGGC 2 cut(s) 437, 948
MroXI GAANNNNTTC 2 cut(s) 609, 662
MscI TGGCCA 1 cut(s) 1174
MseI TTAA 2 cut(s) 303, 747
Msp20I TGGCCA 1 cut(s) 1174
MspA1I CMGCKG 3 cut(s) 137, 560, 1195
MspI CCGG 3 cut(s) 438, 731, 949
MspR9I CCNGG 3 cut(s) 39, 576, 887
MunI CAATTG 1 cut(s) 1269
MvaI CCWGG 3 cut(s) 39, 576, 887
MvnI CGCG 5 cut(s) 443, 477, 920, 1184, 1202
MwoI GCNNNNNNNGC 7 cut(s) 258, 495, 861, 870, 1082, 1156, 1257
NaeI GCCGGC 2 cut(s) 439, 950
NdeII GATC 8 cut(s) 108, 478, 714, 823, 897, 1027, 1423, 1428
NgoMIV GCCGGC 2 cut(s) 437, 948
NlaIII CATG 6 cut(s) 127, 302, 367, 686, 695, 868
NlaIV GGNNCC 6 cut(s) 408, 739, 953, 1022, 1064, 1065
NmeAIII GCCGAG 1 cut(s) 319
NmuCI GTSAC 1 cut(s) 983
NspI RCATGY 2 cut(s) 367, 686
NspV TTCGAA 1 cut(s) 779
PaeR7I CTCGAG 1 cut(s) 90
PauI GCGCGC 1 cut(s) 441
PciI ACATGT 1 cut(s) 363
PcsI WCGNNNNNNNCGW 1 cut(s) 1158
PdiI GCCGGC 2 cut(s) 439, 950
PdmI GAANNNNTTC 2 cut(s) 609, 662
PfeI GAWTC 3 cut(s) 605, 677, 776
PflMI CCANNNNNTGG 1 cut(s) 38
PkrI GCNGC 1 cut(s) 562
Ple19I CGATCG 1 cut(s) 1030
PleI GAGTC 7 cut(s) 173, 175, 331, 337, 506, 1149, 1272
PmaCI CACGTG 1 cut(s) 1170
PmlI CACGTG 1 cut(s) 1170
PpsI GAGTC 7 cut(s) 173, 175, 331, 337, 506, 1149, 1272
Ppu21I YACGTR 2 cut(s) 418, 1170
PpuMI RGGWCCY 1 cut(s) 737
PscI ACATGT 1 cut(s) 363
Psp124BI GAGCTC 1 cut(s) 21
Psp5II RGGWCCY 1 cut(s) 737
Psp6I CCWGG 3 cut(s) 37, 574, 885
PspCI CACGTG 1 cut(s) 1170
PspFI CCCAGC 1 cut(s) 1059
PspGI CCWGG 3 cut(s) 37, 574, 885
PspN4I GGNNCC 6 cut(s) 408, 739, 953, 1022, 1064, 1065
PspOMI GGGCCC 1 cut(s) 1062
PspPI GGNCC 8 cut(s) 238, 737, 883, 922, 939, 951, 1062, 1063
PspPPI RGGWCCY 1 cut(s) 737
PstI CTGCAG 1 cut(s) 16
PsuI RGATCY 2 cut(s) 714, 1428
PteI GCGCGC 1 cut(s) 441
PvuI CGATCG 1 cut(s) 1030
PvuII CAGCTG 2 cut(s) 560, 1195
RsaI GTAC 2 cut(s) 373, 1181
RsaNI GTAC 2 cut(s) 372, 1180
SacI GAGCTC 1 cut(s) 21
SalI GTCGAC 1 cut(s) 359
SaqAI TTAA 2 cut(s) 303, 747
SatI GCNGC 1 cut(s) 561
Sau3AI GATC 8 cut(s) 108, 478, 714, 823, 897, 1027, 1423, 1428
Sau96I GGNCC 8 cut(s) 238, 737, 883, 922, 939, 951, 1062, 1063
SchI GAGTC 7 cut(s) 173, 176, 331, 338, 506, 1150, 1273
ScrFI CCNGG 3 cut(s) 39, 576, 887
SduI GDGCHC 4 cut(s) 21, 918, 1066, 1161
SexAI ACCWGGT 1 cut(s) 885
SfaNI GCATC 2 cut(s) 145, 298
SfcI CTRYAG 3 cut(s) 12, 840, 1252
Sfr274I CTCGAG 1 cut(s) 90
SfuI TTCGAA 1 cut(s) 779
SinI GGWCC 4 cut(s) 238, 737, 883, 939
SlaI CTCGAG 1 cut(s) 90
SmlI CTYRAG 3 cut(s) 65, 90, 1136
SmoI CTYRAG 3 cut(s) 65, 90, 1136
Sse9I AATT 6 cut(s) 398, 1126, 1220, 1226, 1239, 1269
SsiI CCGC 8 cut(s) 135, 259, 347, 602, 920, 1067, 1184, 1232
SspMI CTAG 5 cut(s) 411, 432, 674, 911, 1211
SstI GAGCTC 1 cut(s) 21
StyD4I CCNGG 3 cut(s) 37, 574, 885
StyI CCWWGG 2 cut(s) 642, 1407
TaaI ACNGT 4 cut(s) 115, 1036, 1154, 1328
TaiI ACGT 4 cut(s) 390, 420, 665, 1172
TaqI TCGA 7 cut(s) 91, 165, 360, 711, 779, 1026, 1030
TasI AATT 6 cut(s) 398, 1126, 1220, 1226, 1239, 1269
TfiI GAWTC 3 cut(s) 605, 677, 776
Tru1I TTAA 2 cut(s) 303, 747
Tru9I TTAA 2 cut(s) 303, 747
TscAI CASTG 6 cut(s) 118, 157, 259, 477, 505, 1333
TseFI GTSAC 1 cut(s) 983
TseI GCWGC 1 cut(s) 560
Tsp45I GTSAC 1 cut(s) 983
TspDTI ATGAA 7 cut(s) 16, 202, 638, 680, 690, 777, 1331
TspGWI ACGGA 2 cut(s) 260, 389
TspRI CASTG 6 cut(s) 118, 157, 259, 477, 505, 1333
Van91I CCANNNNNTGG 1 cut(s) 38
VpaK11BI GGWCC 4 cut(s) 238, 737, 883, 939
XagI CCTNNNNNAGG 1 cut(s) 42
XapI RAATTY 1 cut(s) 1126
XceI RCATGY 2 cut(s) 367, 686
XcmI CCANNNNNNNNNTGG 1 cut(s) 649
XhoI CTCGAG 1 cut(s) 90
XmiI GTMKAC 1 cut(s) 360
XmnI GAANNNNTTC 2 cut(s) 609, 662
XspI CTAG 5 cut(s) 411, 432, 674, 911, 1211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.